Metagenome / Metatranscriptome Family F053207

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F053207
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	91 residues
Representative Sequence	MSSPSGGFTAANLSWSKVDVLTAYERLTAEIQVRGGRLRETINDPEPLFHMRNVSAEPLLPGAVPLSGVPEGLFNKNLIGGIRTIEPEPPP
Number of Associated Samples	114
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	41.30 %
% of genes near scaffold ends (potentially truncated)	96.45 %
% of genes from short scaffolds (< 2000 bps)	88.65 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (97.872 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (30.496 % of family members)
Environment Ontology (ENVO)	Unclassified (38.298 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.539 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.72% β-sheet: 37.82% Coil/Unstructured: 55.46%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF01425	Amidase	85.82
PF08241	Methyltransf_11	0.71
PF00248	Aldo_ket_red	0.71
PF00313	CSD	0.71
PF02638	GHL10	0.71
PF13847	Methyltransf_31	0.71
PF12695	Abhydrolase_5	0.71
PF00005	ABC_tran	0.71
PF13649	Methyltransf_25	0.71
PF02738	MoCoBD_1	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	85.82
COG1649	Uncharacterized lipoprotein YddW, UPF0748 family	Function unknown [S]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.87 %
Unclassified	root	N/A	2.13 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.87 %
Unclassified	root	N/A	2.13 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.87 %
Unclassified	root	N/A	2.13 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	60.99 %
Unclassified	root	N/A	2.13 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	60.99 %
Unclassified	root	N/A	2.13 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	60.99 %
Unclassified	root	N/A	2.13 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	60.99 %
Unclassified	root	N/A	2.13 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908032\|Perma_A_C_ConsensusfromContig175123	All Organisms → cellular organisms → Bacteria	3477	Open in IMG/M
3300001593\|JGI12635J15846_10017484	All Organisms → cellular organisms → Bacteria	5944	Open in IMG/M
3300001593\|JGI12635J15846_10585757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	650	Open in IMG/M
3300002916\|JGI25389J43894_1040511	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300005167\|Ga0066672_10183287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1328	Open in IMG/M
3300005174\|Ga0066680_10953207	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300005177\|Ga0066690_10337821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1020	Open in IMG/M
3300005177\|Ga0066690_10837195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	594	Open in IMG/M
3300005180\|Ga0066685_10134922	All Organisms → cellular organisms → Bacteria	1670	Open in IMG/M
3300005186\|Ga0066676_10691538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	694	Open in IMG/M
3300005437\|Ga0070710_10723803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	704	Open in IMG/M
3300005445\|Ga0070708_101447607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	640	Open in IMG/M
3300005446\|Ga0066686_10189709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1373	Open in IMG/M
3300005451\|Ga0066681_10454425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	787	Open in IMG/M
3300005454\|Ga0066687_10782588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	568	Open in IMG/M
3300005467\|Ga0070706_101402493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	639	Open in IMG/M
3300005468\|Ga0070707_100176673	All Organisms → cellular organisms → Bacteria	2081	Open in IMG/M
3300005518\|Ga0070699_100661516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	954	Open in IMG/M
3300005536\|Ga0070697_101002184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	742	Open in IMG/M
3300005536\|Ga0070697_101369112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	632	Open in IMG/M
3300005540\|Ga0066697_10584679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	621	Open in IMG/M
3300005542\|Ga0070732_11016886	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300005546\|Ga0070696_100510472	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300005553\|Ga0066695_10440466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	804	Open in IMG/M
3300005557\|Ga0066704_10364821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	966	Open in IMG/M
3300005557\|Ga0066704_10811274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	581	Open in IMG/M
3300005559\|Ga0066700_10503858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	845	Open in IMG/M
3300005559\|Ga0066700_10604167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	764	Open in IMG/M
3300005559\|Ga0066700_10960690	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300005560\|Ga0066670_10941605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	526	Open in IMG/M
3300005563\|Ga0068855_101879856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	607	Open in IMG/M
3300005574\|Ga0066694_10092608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1408	Open in IMG/M
3300005574\|Ga0066694_10447967	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300005575\|Ga0066702_10329263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	930	Open in IMG/M
3300005575\|Ga0066702_10964886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	510	Open in IMG/M
3300006028\|Ga0070717_11908402	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300006034\|Ga0066656_10963423	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300006058\|Ga0075432_10594638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	505	Open in IMG/M
3300006755\|Ga0079222_10349513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	998	Open in IMG/M
3300006800\|Ga0066660_11547450	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300006806\|Ga0079220_10027004	All Organisms → cellular organisms → Bacteria	2496	Open in IMG/M
3300006903\|Ga0075426_11228220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	568	Open in IMG/M
3300009029\|Ga0066793_10151029	All Organisms → cellular organisms → Bacteria	1355	Open in IMG/M
3300009029\|Ga0066793_10211136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1129	Open in IMG/M
3300009029\|Ga0066793_10416120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	771	Open in IMG/M
3300009038\|Ga0099829_10600677	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300009038\|Ga0099829_10714787	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300009038\|Ga0099829_11343896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	591	Open in IMG/M
3300009088\|Ga0099830_10381101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1138	Open in IMG/M
3300009088\|Ga0099830_11454485	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300009089\|Ga0099828_11421407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	612	Open in IMG/M
3300009824\|Ga0116219_10632931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	587	Open in IMG/M
3300010321\|Ga0134067_10257768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	659	Open in IMG/M
3300010333\|Ga0134080_10365623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	660	Open in IMG/M
3300010333\|Ga0134080_10444364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	607	Open in IMG/M
3300010361\|Ga0126378_10306815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1691	Open in IMG/M
3300010361\|Ga0126378_10645782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1171	Open in IMG/M
3300010373\|Ga0134128_10913536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	972	Open in IMG/M
3300011269\|Ga0137392_10736137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	816	Open in IMG/M
3300011269\|Ga0137392_11221298	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300011271\|Ga0137393_10737933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	843	Open in IMG/M
3300011271\|Ga0137393_11076011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	684	Open in IMG/M
3300012004\|Ga0120134_1026042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	952	Open in IMG/M
3300012008\|Ga0120174_1011986	All Organisms → cellular organisms → Bacteria	2950	Open in IMG/M
3300012019\|Ga0120139_1139718	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300012189\|Ga0137388_11138967	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300012189\|Ga0137388_11951632	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300012202\|Ga0137363_10914851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	745	Open in IMG/M
3300012208\|Ga0137376_10553035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	997	Open in IMG/M
3300012210\|Ga0137378_11326843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	635	Open in IMG/M
3300012211\|Ga0137377_10493339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1163	Open in IMG/M
3300012349\|Ga0137387_10044005	All Organisms → cellular organisms → Bacteria	2950	Open in IMG/M
3300012363\|Ga0137390_11860374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	531	Open in IMG/M
3300012927\|Ga0137416_11142339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	700	Open in IMG/M
3300012927\|Ga0137416_12217917	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300012930\|Ga0137407_11537044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	633	Open in IMG/M
3300012972\|Ga0134077_10021022	All Organisms → cellular organisms → Bacteria	2241	Open in IMG/M
3300012975\|Ga0134110_10018056	All Organisms → cellular organisms → Bacteria	2713	Open in IMG/M
3300012977\|Ga0134087_10364173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	694	Open in IMG/M
3300013758\|Ga0120147_1040026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	842	Open in IMG/M
3300013766\|Ga0120181_1071054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	768	Open in IMG/M
3300013832\|Ga0120132_1087481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	643	Open in IMG/M
3300014058\|Ga0120149_1188014	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300014823\|Ga0120170_1013321	All Organisms → cellular organisms → Bacteria	2542	Open in IMG/M
3300015054\|Ga0137420_1024756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1437	Open in IMG/M
3300015193\|Ga0167668_1004728	All Organisms → cellular organisms → Bacteria	3019	Open in IMG/M
3300015245\|Ga0137409_11285468	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300017659\|Ga0134083_10328756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	654	Open in IMG/M
3300017993\|Ga0187823_10120316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	804	Open in IMG/M
3300018431\|Ga0066655_10867388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	616	Open in IMG/M
3300018433\|Ga0066667_10024676	All Organisms → cellular organisms → Bacteria	3271	Open in IMG/M
3300018482\|Ga0066669_10692874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	897	Open in IMG/M
3300020002\|Ga0193730_1157944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	593	Open in IMG/M
3300020015\|Ga0193734_1091286	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300020581\|Ga0210399_10520859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	987	Open in IMG/M
3300021046\|Ga0215015_10949338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	888	Open in IMG/M
3300021432\|Ga0210384_10907362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	781	Open in IMG/M
3300021479\|Ga0210410_10238307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1631	Open in IMG/M
3300022691\|Ga0248483_113069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1289	Open in IMG/M
3300024287\|Ga0247690_1035655	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300025906\|Ga0207699_11342249	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300025928\|Ga0207700_11983282	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300026305\|Ga0209688_1111212	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300026307\|Ga0209469_1075561	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300026307\|Ga0209469_1119289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	656	Open in IMG/M
3300026309\|Ga0209055_1278049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	523	Open in IMG/M
3300026309\|Ga0209055_1299213	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300026322\|Ga0209687_1230668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	571	Open in IMG/M
3300026323\|Ga0209472_1052934	All Organisms → cellular organisms → Bacteria	1738	Open in IMG/M
3300026329\|Ga0209375_1180831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	835	Open in IMG/M
3300026330\|Ga0209473_1205130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	742	Open in IMG/M
3300026330\|Ga0209473_1307347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	529	Open in IMG/M
3300026335\|Ga0209804_1303486	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300026343\|Ga0209159_1113625	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300026530\|Ga0209807_1216170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	660	Open in IMG/M
3300026530\|Ga0209807_1307449	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300026538\|Ga0209056_10665713	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300026547\|Ga0209156_10288980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	744	Open in IMG/M
3300026550\|Ga0209474_10067072	All Organisms → cellular organisms → Bacteria	2505	Open in IMG/M
3300027633\|Ga0208988_1148757	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300027669\|Ga0208981_1022742	All Organisms → cellular organisms → Bacteria	1598	Open in IMG/M
3300027674\|Ga0209118_1012650	All Organisms → cellular organisms → Bacteria	2828	Open in IMG/M
3300027681\|Ga0208991_1085891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	946	Open in IMG/M
3300027738\|Ga0208989_10241552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	590	Open in IMG/M
3300027748\|Ga0209689_1121053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1316	Open in IMG/M
3300027748\|Ga0209689_1240708	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300027846\|Ga0209180_10657968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	574	Open in IMG/M
3300027857\|Ga0209166_10276000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	888	Open in IMG/M
3300027875\|Ga0209283_10817103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	572	Open in IMG/M
3300027882\|Ga0209590_10595161	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300027986\|Ga0209168_10260506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	857	Open in IMG/M
3300029636\|Ga0222749_10343787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	780	Open in IMG/M
3300029636\|Ga0222749_10824494	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300031668\|Ga0318542_10651664	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300031740\|Ga0307468_100688732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	852	Open in IMG/M
3300031962\|Ga0307479_11323373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	681	Open in IMG/M
3300031962\|Ga0307479_11426204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	651	Open in IMG/M
3300032174\|Ga0307470_10755457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	748	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.87%
Host-Associated	Host-Associated	2.13%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.16%
Plants	Host-Associated → Plants	2.13%
Aquatic	Environmental → Aquatic	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.42%
Freshwater	Environmental → Aquatic → Freshwater	0.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.56%
Loam	Environmental → Terrestrial → Soil → Loam	13.48%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.42%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.71%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	33.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.51%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.51%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	6.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.13%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.42%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	30.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.44%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.51%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	5.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.13%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	2.13%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.42%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.71%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.71%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.71%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012008	Permafrost microbial communities from Nunavut, Canada - A39_80cm_12M	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013758	Permafrost microbial communities from Nunavut, Canada - A24_65cm_12M	Environmental	Open in IMG/M
3300013766	Permafrost microbial communities from Nunavut, Canada - A26_65cm_6M	Environmental	Open in IMG/M
3300013832	Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M	Environmental	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300014823	Permafrost microbial communities from Nunavut, Canada - A3_80cm_0M	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022691	Soil microbial communities from Calhoun CZO, South Carolina, United States - 60cm depth	Environmental	Open in IMG/M
3300024287	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK31	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Perma_A_C_00121260	2124908032	Soil	MPQTSGMINPSVAWTKVDVLTSYQRLSGEIQMRVRLRETMNDPEPLFHLRNVSAEPLLPGAVSLNGVPEGLFSKALICGIRTIESEPPPPDQVEVTRRFAMYQAGTF
JGI12635J15846_100174841	3300001593	Forest Soil	MSTPSGGFAAANLSWSKVDVLTAFQRLTAEIQVRGGRLGQTINDPEPLFHLRNVSAEPLVPGAVPLSGVPEGLFNKA
JGI12635J15846_105857572	3300001593	Forest Soil	MQSTGALNVAIAWSKVDLLTPSQRITAELQIRGRLRDTINDPEPVFHLRNVSAEPLIPGAVPLNGVPEGLFSKTLVGGIRTIDPEPPPPD
JGI25389J43894_10405111	3300002916	Grasslands Soil	VLTSFERLTAEIQVRGGRLRETINDPEPLFHLRNVSADPLVPGAVPLSGVPEGLFNKSFIGGIRTIEPEPPPPDLVAEMMRRYVM
Ga0066672_101832871	3300005167	Soil	MSQQMGAVSPNITWTKVDVLTAYERLTAEIQIRGRLRETMNDPEPLFHLRNVSAEPLLPGAVQLNGVPEGLFNKAAICGIRTIDAEAPLPDQPEVIRRYAM
Ga0066680_109532071	3300005174	Soil	MASPSAAFTAANLSWVKVDVLTPYQRLTAEIQVRGGRLRETINDPEPLFHLRNVSAEPLLPGAVPLSGVPEGLFNKNLIGGIRTIEPEPPP
Ga0066690_103378211	3300005177	Soil	MSGPSGGFAAANLSWSKVDVLTSYERLTAEIQVRGGRLRETINDPEPLFHLRNVSAEPLLTGAVPLSGVPEGLFNKNFIGGIRTIEPEP
Ga0066690_108371952	3300005177	Soil	MQQPTAGAIGIANWTKVDVLTPYQRLTGEMQIRGRMRETLNDQESLFHMRNVSAEPLLPGAVQLNGVPEGLFNKALIGGIRTI
Ga0066685_101349223	3300005180	Soil	MQQPTAGAIGIANWTKVDVLTPYQRLTGEMQIRGRMRETLNDQESLFHMRNVSAEPLLPGAVQLNGVPEGLFNKALIGGIR
Ga0066676_106915381	3300005186	Soil	MSTPSGGFTSANLSWSKVDVLTPYQRLTAEVQVRGGRLRETINDPEPLFHMRNVSAEPLLPGAVPLSGVPEGLFNKDL
Ga0070710_107238032	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSSPSGGFAAALSWSKIDALSAYERITAEIQVRGGRLRETINDPEPLFHLRNVSAEPLLPGAVPLTGIPEGLFNKNFIGGIRAIEPEPPPPDH
Ga0070708_1014476072	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSALNPNIVWSKVDVLTAYQRITAEIQIRGRLRDTINDPEPLFHLRNVSAEPLVPGAVPLNGVPEGLFNKGAVCGIRTIEPEPPLPDQPEQIRRFVMFQG
Ga0066686_101897092	3300005446	Soil	MSSPSGGFTAANLSWSKVDVLTAYERLTAEVQVRGGRLRETINDPEPLFHMRNVSAEPLLPGAVPLSGVPEGLFNKNLIGGIRTIEPEPPPPDLV
Ga0066681_104544251	3300005451	Soil	MSSPTAGALGANLSWSKVDVLTSFERLSAEIQVRGGRLRETINDPEPLFHMRNVSAEPLVPGAVPLSGVPEGLFNK
Ga0066687_107825882	3300005454	Soil	MSSPTAGAIGANLSWSKVDVLTSFERLTAEIQVRGGRLRETINDPEPLFHMRNVSAEPLVPGAVPLSGVPEGLFNKDFVGGIRTVEPEPPPADMVAE
Ga0070706_1006483051	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSALNANIVWAKVDVLTSYERLTAEIQIRGRLRDTINDPEPLFHLRNVSAEPLVPGAVPLNGVPEGLFNKGAVCGIRTIDPEPP
Ga0070706_1014024932	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSALNPNIVWSKVDVLTAYQRITAEIQIRGRLRDTINDPEPLFHLRNVSAEPLVPGAVPLNGVPEGLFNKGAVCGIRTIEPEPPLPDQPEQIRRFV
Ga0070707_1001766731	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MGALNPTMAWTKVDVLTSYQRITAEIQVRGRLRETINDPEPLFHLRNVSAEPLLPGAVQLNGIPEGLFNKQWVYGIRTIEPEAPMPDQPELMR
Ga0070699_1006615162	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MQQPTAGAIGTANWVKVDVLTRYQRLTGEMHLRGRMREMLNDPESLFHLRNVSAEPMLPGAVQLNGVPEGAFNKALVGGIRTIEPEPPPPDQAVETMRRY
Ga0070697_1010021841	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSSPTAGFAASLSWSKVDVLTAYQRLTAEVQVRGGRLRETINDPEPLFHMRNVSAEPLLPGAVPLSGVPEGLFNKNLIGGIRTIEPEPPPA
Ga0070697_1013691122	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSALNPNIVWSKVDVLTAYQRITAEIQIRGRLRDTINDPEPLFHLRNVSAEPLVPGAVPLNGVPEGLFNKGAVCGIRTIDPEAPLPDQPE
Ga0066697_105846792	3300005540	Soil	MASPSAAFTAANLSWVKVDVLTPYQRLTAEIQVRGGRLRETINDPEPLFHLRNVSAEPLLPGAVPLSGVPEGLFNKNLIGGIRTIEPEP
Ga0070732_110168862	3300005542	Surface Soil	VFTAYERITAEIQVRGGRLRETINDPEPLFHLRNVSAEPLLPGAVPLTGIPEGLFNKNFIGGIRTIEPEPPPPDHVAET
Ga0070696_1005104722	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MSGPPSGAIGANLSWSKVDVLTAYERITAEIQVRGGRLRETINDPEPLFHMRNVSAEPLAPGAVPLSGVPEGLFNKNFIGGIRTIEPEPPPPTSWPT*
Ga0066695_104404662	3300005553	Soil	MQQPTAGAIGTANWAKVDVLTSYQRLTGEMQIRGRMRETLNDQESLFHMRNVSAEPLLPGAVQLNGVPEGLFNKALI
Ga0066704_103648212	3300005557	Soil	MSALNPNIVWAKVDVLTPYQRITAEIQIRGRLRDTINDPEPLFHLRNVSAEPLVPGAVPLNGVPEGLFNKASVCGIRTIDIEPPLPDQPEQMRRFVMFQGTTFMVTGA
Ga0066704_108112741	3300005557	Soil	MSSPSGGFSAANLSWVKVDVLTAYQRMTAEIQVRGGRLRETINDPEPLFHMRNVSSEPVLPGAVPLSGVPEGLFNKNFIGGIRTIE
Ga0066700_105038582	3300005559	Soil	VLTAYERLTAEIQVRGGRLRETINDPEPLFHMRNVSAEPLLPGAVPLSGVPEGLFNKNLIGGIRTIEPEPPPPDLVADMTRRYVMFQ
Ga0066700_106041672	3300005559	Soil	VLTAYERLTAEIQVRGRLRETMIDPEPLFHLHNISAEPLLPGAVPLNGVPEGLFNKALIGGIRTIEPEPPPPDQVMEMIRRYAMFQASSFLVSGFVE
Ga0066700_109606901	3300005559	Soil	MQQPTAGAIGIANWTKVDVLTPYQRLTGEMQIRGRMRETLNDQESLFHMRNVSAEPLLPGAVQLNGVPEGLFNKALIGGIRTIDPEPPPVDPQM
Ga0066670_109416052	3300005560	Soil	MSGPSGGFAAANLSWSKVDVLTSYERLTAEIQVRGGRLRETINDPEPLFHLRNVSAEPLLTGAVPLSGVPEGLF
Ga0068855_1018798561	3300005563	Corn Rhizosphere	MTGTMGSINPNLAWTRVDVLTPYQRMTADIQIRGRLAATINDAEPLFHLRNVSAEPLQPGAVPLNGVPEGLFSKTQICGIRTIEAEAPLPDQASIEIVRRYAMFQ
Ga0066694_100926082	3300005574	Soil	MQQPTAGAIGIANWTKVDVLTPYQRLTGEMQIRGRMRETLNDQESLFHMRNVSAEPLLPGAVQLNGVPEGLFNKAL
Ga0066694_104479671	3300005574	Soil	MSSPSGGFTAANLSWSKVDVLTAYERLTAEIQVRGGRLRETINDPEPLFHMRNVSAEPLLPGAVPLSGVPEGLFNKNLIGGIRTIEPEPPP
Ga0066702_103292632	3300005575	Soil	MSGPSGGFAAANLSWSKVDVLTSYERLTAEIQVRGGRLRETINDPEPLFHLRNVSAEPLLTGAVPLSGVPEGLFN
Ga0066702_109648861	3300005575	Soil	MSSPTAGAIGANLSWSKVDVLTSFERLTAEIQVRGGRLRETINDPEPLFHLRNVSAEPLVAGAVPLTGIPEGLFNKD
Ga0070717_119084022	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSSPTSGALGANLSWSKVDVLTSFERLTAEIQVRGGRLRETINDPEPLFHLRNVSAEPLVPGAVPLSGVPEGLFSKNFVGGIRT
Ga0066656_109634232	3300006034	Soil	MINPNIAWSRVDVLTAYQRLTGEIQIRGRLRETINDPEPFFHLRNVSAEPLLPGAVPLNGVPEGLFNKALIGGIRTIEAEPPPPDQPEVTRRYAMFQAG
Ga0075432_105946382	3300006058	Populus Rhizosphere	MASPTGGFSAAANLSWSKVDVLTSYERLTGEVQVRGGRLRETINDPEPLFHMRNVSAEPLVPGAVPLSGVPEGLFNKN
Ga0079222_103495132	3300006755	Agricultural Soil	MSAQTAGSISANLSWSKVDVLTPFQRLTAEIQVRGGRLRETINDPEPLFHMRNVSAEPLVPGAVPLSGVPEGLFNKNLIGGIRTVDPEPPPADMVAEM
Ga0066660_115474501	3300006800	Soil	MQPSGSLGVPSPWTKVDVLTAYERLTAEIQVRGRLRETMIDPEPLFHLHNISAEPLLPGAVALNGVPEGLFNKALVGGIRTIEPEPPPPDQVMEMIRRYAM
Ga0079220_100270041	3300006806	Agricultural Soil	VLSAYERITAEIQVRGGRLRETINDPEPLFHLRGVSAEPLLPGAVPLTGIPEGLFNKNFVGGIRTIEPEPPPPDHVAEMMR
Ga0075426_112282202	3300006903	Populus Rhizosphere	MSSPSGGFTAANLSWSKVDILTSFQRLTAEIQVRGGRLRETINDPEPLFHMRNVSAEPLVPGAVPLAGVPEGLFNKNFVGGMRTI
Ga0066793_101510292	3300009029	Prmafrost Soil	MPTTGAINAAIAWSKVDVLTPSQRLTAEIQIRGRLRDTINDPEPVFHLRNVSAEPLIPGAVSLNGVPEGLFSKAFVGGIRTIEPEPPP
Ga0066793_102111362	3300009029	Prmafrost Soil	VSPTTGAVAAPIAWSKVDVLTPYQRITAEIQVRGRLRETINDPEPMFHLRNVSAEPLQPGAVGLNGVPEGLFSKAMIGGIRSIEPEPPAPDQVMDMIRRYVMFQ
Ga0066793_104161202	3300009029	Prmafrost Soil	MAPILAAVELSSLAMPQTAGMINPTVAWSKVEVLTAYQRLTGEIQMRVRLRETINDPEPYFHLRNVSAEPLLPGAVALNGVPEGLFSKALIGGIRTIEPEPPPPDQMEVTRR
Ga0099829_106006772	3300009038	Vadose Zone Soil	MSPTTGALGVAIAWTKVDVLTPSQRITAEIQIRGRLRDTINDPEPVFHMRNVSAEPLIPGAVALNGVPEGLFSKALIGGIRTIEPEPPPPDQIMELIRRYIMFQAD
Ga0099829_107147872	3300009038	Vadose Zone Soil	MRETLNDPESMFHLRNVSAEPLVPGAVPLNGVPEGVFNKALVGGIRTIDPEPPPPDQAVETMRRYVMYQAADFMVTGFAEFTKASS
Ga0099829_113438961	3300009038	Vadose Zone Soil	MSQPMSALNPNIVWAKVDVLTAYQRITAEIQIRGRLRDTINDPEPLFHLRTVSAEPLVPGAVPLNGVPEGLFNKAAICGIRTIEPEPPLPDQPEQTRRFVMFQ
Ga0099830_103811011	3300009088	Vadose Zone Soil	MSTPSGGFAAANLSWSKVDVLTSFERLTAEIQVRGGRLGQTINDPEPLFHLRNVSAEALVPGAVPLSGVPEGLFNKAHIGGIRTIE
Ga0099830_114544852	3300009088	Vadose Zone Soil	MQQPTAGAIGTANWVKVDVLTPYQRLSGEIHLRGRIRETLNDPESIFHLRNVSAEPLLPGAVPLNGVPEGVFNKALVGGIRTIDPEPPPPDQAVETMRRYVMYQ
Ga0099828_114214072	3300009089	Vadose Zone Soil	MSQAMSALNPNIVWAKVDVLTAYQRLTAEIQIRGRLRDTINDPEPLFHLRNVSAEPLVPGAVPLNGVPEGLFNKGAVCGIRTIEPEVPLPDQPEQIRRFVMFQGTTFM
Ga0116219_106329312	3300009824	Peatlands Soil	MAPTTGPINPALAWRKVDVLTSYQRVTAELQIRGRIRENLNDNESLMHLRSISAEPLVPGAVPLVGVPEGLFNKSLIGGIRTIEPEPPP
Ga0134067_102577682	3300010321	Grasslands Soil	MSGPSGGFAAANLSWSKVDVLTSYERLTAEIQVRGGRLRETINDPEPLFHMRNVSAEPLGPGAVPLSGVPEGLFNKNLVGGIRTIEPE
Ga0134080_103656232	3300010333	Grasslands Soil	MSSPTAGALGANLSWSKVDVLTSFQRLSAEIQVRGGRLRETINDPEPLFHMRNVSAEPLVPGAVPLSGVPEGLFNKDFVGGIR
Ga0134080_104443641	3300010333	Grasslands Soil	MQQPTAGAIGTANWAKVDVLTSYQRLTGEMQIRGRMRETLNDQESLFHMRNVSAEPLLPGAVQLNGVPEGLFNKALIGGIRTIDPEPPPV
Ga0126378_103068151	3300010361	Tropical Forest Soil	MQQHTGSFSAANWAKVDVLSAYQRLTAEMQVRGRMRETLNDQESLFHLRNVSAEPLLPGAVPLNGVPEGLFNKNLIGGIRTVEPEP
Ga0126378_106457821	3300010361	Tropical Forest Soil	MQSPSGQFTAANLSWSKVDVLTAFERITAEIQVRGGHLRETINDPEPLFHMRNVSAEPLVPGAVPLSGVPEGLFNKAHV
Ga0134128_109135361	3300010373	Terrestrial Soil	MTGTMGSINPNLAWTRVDVLTPYQRMTADIQIRGRLAATINDAEPLFHLRNVSAEPLQPGAVPLNGVPEGLFSKTQICGIRTIEAEAPLPDQASIEIVR
Ga0137392_107361371	3300011269	Vadose Zone Soil	MSSPSGGFAAANLSWSKVDVLTSFQRLTAEIQVRGGRLRETINDPEPLFHMRNVSAEPLLPGAVPLSGVPEGLFNKDFI
Ga0137392_112212981	3300011269	Vadose Zone Soil	MAQTMGAVGPSIAWVKVDVLTAYQRITAEIQVRGRLRDTMNDPEPLFHLRNVSAEPLVPGAVPLNGVPEGLFNKASVCGIRTIDPEPPLPDQPEQMRRF
Ga0137393_107379331	3300011271	Vadose Zone Soil	MSTPSGGFAAANLSWSKVDVLTSFERLTAEIQVRGGRLGQTINDPEPLFHLRNVSAEALVPGAVPLSGVPEGLFNKAHIGGIRTIEPE
Ga0137393_110760112	3300011271	Vadose Zone Soil	MSQAMSALNPNIVWARVDVLTAYQRLTAEIQIRGRLRDTINDPEPLFHLRNVSAEPLVPGAVPLNGVPEGLFNKGAVCGIRTIEPEVPLPDQPE
Ga0120134_10260422	3300012004	Permafrost	VAAIPGAPLNPAIAWNKVDVLTPYQRLTAEIQVRGRLRDTLNDPEPVFHLRNISAEPLLPGAVQLNGVPEGLFSKAMVGGFRTID
Ga0120174_10119865	3300012008	Permafrost	MPPTSGVISQSVAWTRVEILTAYQRLTGDIQMRVRLRETINDPEPYFHLRNVSAEPLLPGAVALNGVPEGLFNKALIGGIRTIEPEPPPPDQMEVTRRYAMVQAGSFM
Ga0120139_11397181	3300012019	Permafrost	MINPNVAWSKVDVLTAYQRLTGEIQIRGRLRETMNDPEPYFHLKNVSAEPLLAGAVALNGVPEGLFSKALIGGIRTVEPEPPPPDQLE
Ga0137388_111389672	3300012189	Vadose Zone Soil	MSATSGSLNPMLAWSKVDVLTAYQRITAELQIRGRMAPTINDPEPLFHLRNVSAEPLLPGAVALNGVPEGLFNKAMIGGIRTIEPEPPPPDQVMEMIRRYVMFQAA
Ga0137388_119516321	3300012189	Vadose Zone Soil	MSSPTSGSIGANLSWSKVDVLTSYQRLTAEIQVRGGRLRETINDPEPLFHLRNVSAEPLVPGAVPLNGIPEGLFNKDLVGGIRTIEP
Ga0137363_109148512	3300012202	Vadose Zone Soil	MGAVGPSIAWVKVDVLTAYQRITAELQVRGRLRDTMNDPESLFHLRNVSAEPLMPGAVPLNGVPEGTFNKAAVCGIRTIEAEAPLPDQPEFIR
Ga0137376_105530352	3300012208	Vadose Zone Soil	MPETSGIINPTIAWSKVEVLTAYQRLTGDIQMRVRLRETLNDPEPYFHLRNVSAEPLLPGAVALNGVPEGLFNKALVGGIRTIEPEPPPPDQLEVTRRYAM
Ga0137378_113268431	3300012210	Vadose Zone Soil	MQQPTAGAIGIANWTKVDVLTPYQRLTGEMQIRGRMRETLNDQESLFHMRNVSAEPLLPGAVQLNGVPEGLFNKALIGGIRTIDPEPPPVDPQME
Ga0137377_104933391	3300012211	Vadose Zone Soil	MQQPTAGAIGIANWTKVDVLTPYQRLTGEMQIRGRMRETLNDQESLFHMRNVSAEPLLPGAVQLNGVPEGLFNK
Ga0137387_100440054	3300012349	Vadose Zone Soil	MSSPSGGFSAANLSWVKVDVLTAYQRMTAEIQVRGGRLRETINDPEPLFHMRNVSSEPVLPGAVPLSGVPEGLFNKNFIGGIRTIEPEPPPADQIA
Ga0137390_118603741	3300012363	Vadose Zone Soil	MGAVGPSIAWVKVDVLTAYQRITAEIQVRGRLRDTMNDPEPLFHLRNVSAEPLMPGAVQLNGVPEGTFNKTAVCGIRTIEAEAPLPDQPEFIRRF
Ga0137416_111423392	3300012927	Vadose Zone Soil	MGGAIGPNVAWTKVDVLTSYQRLTAEMQIRGRIRETINDPEPLFHLRNVSAEPLLPGAVPLNGVPEGLFNKASICGIRTIEPEPPMPD
Ga0137416_122179172	3300012927	Vadose Zone Soil	MGAISPTVAWTKVDVLTSYQRLTAEIQIRGRLRETMNDAEPLFHLRNVSAEPLLPGAVQLNGVPEGLFNKATVCGIRTIEAEPPLQDQPEIIRRYAMFQG
Ga0137407_115370442	3300012930	Vadose Zone Soil	MSATVGALTANLAWNKVDVLTQYQRITAEIQVRARLRETMNDPEPLFHLRNVSAEPLLPGAVPLNGVPEGLFNKGMIGGIRTIDPEPPVPDQVIELIRRYVMFQVG
Ga0134077_100210223	3300012972	Grasslands Soil	MSSPSGGFTAANLSWSKVDVLTAYERLTAEVQVRGGRLRETINDPEPLFHMRNVSAEPLLPGAVPLSGVPEGLFNKNLIGGIRTIEPEPPPPDLVADMT
Ga0134110_100180564	3300012975	Grasslands Soil	MSSPSGGFSAANLSWVKVDVLTAYQRMTAEIQVRGGRLRETINDPEPLFHLRNVSSEPVLPGAVPLSGVPEGLFNKNFIGG
Ga0134087_103641732	3300012977	Grasslands Soil	MSTPSSSPSGGFTAANLSWSKVDVLTAYERLTAEIQVRGGRLRETINDPEPLFHMRNVSAEPLLPGAVPLSGVPEGLFNKNLIGGIRTIEPEPPPPD
Ga0120147_10400262	3300013758	Permafrost	VLTAYQRLTGEIQMRVRLRETLNDPEPYFHLRNVSAEPLLPGAVALNGVPEGLFNKALVGGIRTVEPEPPPPDQLEVTRRYAMYQAGNFMVAGAAEFAKALE
Ga0120181_10710541	3300013766	Permafrost	VAAIPGAPLNPAIAWNKVDVLTPYQRLTAEIQVRGRLRDTLNDPEPVFHLRNISAEPLLPGAVQLNGVPEGLFSKAMVGGIRTIDP
Ga0120132_10874811	3300013832	Permafrost	MINPNVAWSKVDVLTAYQRLTGEIQIRGRLRETMNDPEPYFHLKNVSAEPLLPGAVPLNGVPEGLFAKALIGGIRTVEPEPPPPDQLEVNRRYAMY
Ga0120149_11880142	3300014058	Permafrost	MPPTSGVISQSVAWTRVEILTAYQRLTGDIQMRVRLRETINDPEPYFHLRNVSAEPLLPGAVALNGVPEGLFNKALIGGIRTIEPEPPPPDQMEVTRRYAMVQAGSFMV
Ga0120170_10133214	3300014823	Permafrost	MINPTIAWTKVEVLTAYQRLTGEIQMRVRLRETLNDPEPYFHLRNVSAEPLLPGAVALNGVPEGLFNKALVGGIRTVEPEPPPPDQLEVTRRYAMYQ
Ga0137420_10247561	3300015054	Vadose Zone Soil	MSATVGSLTPNLAWNKVDLLTQYQRITAEIQVRARLRETMNDPEPLFHLRNVSAEPLLPGAVPLNGVPEGLFNKGMIGGIRTIDPEPPRCPTR*
Ga0167668_10047285	3300015193	Glacier Forefield Soil	MSTPSAGFTAANLSWGKVDVLTAFQRLTAEIQVRGGRLGQTINDPEPLFHLRNVSAEPLVPGAVPLSGVPEGLFNKAHIGGIRTIEPE
Ga0137409_112854681	3300015245	Vadose Zone Soil	MIQTSGMIGSPNWSKVDVLTSYQRLTGEIQLRVRLRETMNDTEPLFHLRNVSAEPLLPGAVALNGVPEGLFSKAMVGGIRTVEAEPPPPDQLEVTRRYAMFQA
Ga0134083_103287562	3300017659	Grasslands Soil	MGAINPSLAWSQVDVLTPYQRMTAEIQIRGRLRETINDPELLFHLRNVSAEPLLPGAVPLSGVPEGLFNKNQIGGIRTIDPEPPPPD
Ga0187823_101203161	3300017993	Freshwater Sediment	MSSPSGGFTGANLSWSKVDVLTSSQRMTAEIQVRGGRLRETINDPEPLFHLRNVSAEPLVPGTVPLSGIPEGLFNKNFIGGIRTI
Ga0066655_108673882	3300018431	Grasslands Soil	MQQPTAGAIGIANWTKVDVLTPYQRLTGEMQIRGRMRETLNDQESLFHMRNVSAEPLLPGAVQLNGVPEGLFNKALIGGIRTIDPEPP
Ga0066667_100246761	3300018433	Grasslands Soil	MQSSGSLGVPSPWTKVDVLTAYERLTAEIQVRGRLRETMIDPEPLFHLHNISAEPLLPGAVPLNGVPAGLFNKALIGGIRTIEP
Ga0066669_106928742	3300018482	Grasslands Soil	MASPSAAFTAANLSWVKVDVLTPYQRLTAEIQVRGGRLRETINDPEPLFHLRNVSAEPLLPGAVPLSGVPEGLFNKNLIG
Ga0193730_11579442	3300020002	Soil	MIQSSPMLNTAVTWSKVDVLTAYQRLTGEIQMRVRLRETMNDPEPLFHLRNVSAEPLLPGAVALNGVPEGLFSKAMVGGIRTLEPEPPP
Ga0193734_10912862	3300020015	Soil	MLQPTVAWSKVDVLTAYQRLTGEIQMRVRLRETMNDPEPFFHLRNVSAEPLLPGAVPLNGVPEGLCSKAHIGGIRTVEPEPPPPDQLEVTR
Ga0210399_105208591	3300020581	Soil	MPQTAGMINPTIAWSKVDVLTPYQRLTGEIQMRVRLRETMNDPEPYFHLRNVSAEPLLPGAVALNGVPEGLFSKALIGGIRTVEPEPPPPDQL
Ga0215015_109493382	3300021046	Soil	MQTAGAISATIAWSKVDVLTPSQRITAEIQIRGRLRDTINDPEPMFHLRNVSAEPLIPGAVALNGVPEGLFSKTLVGGIRTIEPEPPPQDQIMEMIRRYIMFQADTFMV
Ga0210384_109073622	3300021432	Soil	MQSTGALNVAIAWSKVDVLTPSQRITAELQIRGRLRDTINDPEPVFHLRNVSAEPLIPGAVALNGVPEGLFSKTLVGGIRTIDPEPPPPDQIMELIRRYVMFQA
Ga0210410_102383071	3300021479	Soil	MQSTGALNVAIAWSKVDVLTPSQRITAELQIRGRLRDTINDPEPVFHLRNVSAEPLIPGAVALNGVPEGLFSKTLVGGIRTIDPEPPP
Ga0248483_1130692	3300022691	Soil	MSTPSGAFAAANLVWAKVDVLTAYQRLTAEIQLRGRLRETINDPEQHFHLRNVSAEPLLPGAVPLSGVPEGLFNKELIGGIRTIEPEPPPPDQVME
Ga0247690_10356551	3300024287	Soil	MLNTAVTWSKVDVLTAYQRLTGEIQMRVRLRETMNDPEPLFHLRNVSAEPLLPGAVALNGVPEGLFSKAMVGGIRTLEAEPPPPDQLEVTRRYAMFQAS
Ga0207699_113422492	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSPTTTSLSPAIAWSKVDLLTSYQRLTAELQVRGRLRETMNDPEPLFHLRNVSAEPLLPGAVQLNGVPEGLFSKTLVGGIRTIEPEPPPPDQVMDVLRRYI
Ga0207700_119832821	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VAQGIGLGAVAWTKVDVLTPYQRLTAEMQIHARLPAMLNEPENTFHLRNVSAEPLLPGAVALNGVPEGTFSKVHICGIRTIDPEPPPPELAP
Ga0209688_11112122	3300026305	Soil	MSSPSGGFTAANLSWSKVDVLTAYERLTAEIQVRGGRLRETINDPEPLFHMRNVSAEPLGPGAVPLSGVPEGLFNKNLV
Ga0209469_10755612	3300026307	Soil	MQQPTAGAIGTANWAKVDVLTSYQRLTGEMQIRGRMRETLNDQESLFHMRNVSAEPLLPGAVQLNGVPEGLFNKALIGGIRTIDPEPP
Ga0209469_11192892	3300026307	Soil	MINPNIAWSRVDVLTAYQRLTGEIQIRGRLRETINDPEPFFHLRNVSAEPLLPGAVPLNGVPEGLFNKALIGGIRTIEAEPPPPDQP
Ga0209055_12780492	3300026309	Soil	MDRPSASLNVAITWAKVDVLTMYQRITAEIQMRTRLRETMNDPEPFFHLRNVSAEPLLPGAVPLNGVPEGLFNKDAVLGIRTIEPEPV
Ga0209055_12992131	3300026309	Soil	MSGSPSGGFTGANLSWSKVDVLTSSERLTAEIQVRGGRLRETINDPEPLFHLRNVSAEPLVPGAVPLTGIPEGLFNKDFIGGIRTIEPEPPPPDLVADMMR
Ga0209687_12306681	3300026322	Soil	MASPSAAFTAANLSWVKVDVLTPYQRLTAEIQVRGGRLRETINDPEPLFHLRNVSAEPLLPGAVPLSGVPEGLFNKNLI
Ga0209472_10529343	3300026323	Soil	MQQPTAGAIGIANWTKVDVLTPYQRLTGEMQIRGRMRETLNDQESLFHMRNVSAEPLLPGAVQLNGVPEGLFNKA
Ga0209375_11808311	3300026329	Soil	MSSPTAGALGANLSWSKVDVLTSFERLSAEIQVRGGRLRETINDPEPLFHMRNVSAEPLVPGAVPLSGVPEGLFNKDFVGGIRTMEPEPAPP
Ga0209473_12051302	3300026330	Soil	MSGPSGGFAAANLSWSKVDVLTSYERLTAEIQVRGGRLRETINDPEPLFHLRNVSAEPLLTGAVPLSGVPEGLFNKNFIGGIRTIEPEPPPPDMVADMI
Ga0209473_13073471	3300026330	Soil	MSSPTAGAIGANLSWSKVDVLTSFERLTAEIQVRGGRLRETINDPEPLFHMRNVSAEPLVPGAVPLSGVPEGLFNKDFV
Ga0209158_12035842	3300026333	Soil	MSQQMGAVSPNITWTKVDVLTAYERLTAEIQIRGRLRETMNDPEPLFHLRNVSAEPLLPGAVQLNGVPEGLFNKAAICGIRTIDAE
Ga0209804_13034862	3300026335	Soil	MQPSGSLGVPSPWTKVDVLTAYERLTAEIQVRGRLRETMIDPEPLFHLHNISAEPLLPGAVPLNGVPEGLFNKALIGGIRTIEPEPPPPD
Ga0209159_11136252	3300026343	Soil	MQQPTAGAIGTANWAKVDVLTSYQRLTGEMQIRGRMRETLNDQESLFHMRNVSAEPLLPGAVQLNGVPEGLFNKALIGGIRTIDPEPPPLDQSMETIRR
Ga0209807_12161701	3300026530	Soil	MQQPTAGAIGIANWTKVDVLTPYQRLTGEMQIRGRMRETLNDQESLFHMRNVSAEPLLPGAVQLNGVPEGL
Ga0209807_13074491	3300026530	Soil	VAQGIGLGAIAWTKVDVLTPYQRLTAEMQIRGRLPATINEQESLFHLRNVSAEPVLPGAVALNGVPEGTFNKVLVCGIRTIEPEPPPPDQV
Ga0209056_106657132	3300026538	Soil	MQQPTAGAIGIANWTKVDVLTPYQRLTGEMQIRGRMRETLNDQESLFHMRNVSAEPLLPGAVQLNGVPEGLFNKALIGGIRT
Ga0209156_102889802	3300026547	Soil	MQTAGALGAQAQWTKVDLLTPYQRLTAEIQLRGRLRETMNDPEPLFHLHNVSAEPLMPGAVPLNGVPEGLFSKSLVCGIRTIEPEPPPPDQ
Ga0209474_100670724	3300026550	Soil	MSSPTAGAIGANLSWSKVDVLTSFERLTAEIQVRGGRLRETINDPEPLFHMRNVSAEPLVPGAVPLSGVPEGLFNKDFVGGIRTVEPEPPPADMVAEMIR
Ga0208988_11487571	3300027633	Forest Soil	VATSGSLNPVLAWSKVDVLTSYQRITAELQIRGRLAPTINDPEPLFHLRNVSAEPLMPGAVALNGVPEGLFNKAMVGGIRSIEPEPPPPDQVIE
Ga0208981_10227422	3300027669	Forest Soil	MSQQMGAVSPNITWTKVDVLTSYERLTAEIQVRGRLRETMNDAEPLFHLRNVSAEPLLPGAVQLNGVPEGLFNKAAICGIRTIDAEAPLPDQP
Ga0209118_10126501	3300027674	Forest Soil	MSQTLGTAGAIVWSKVDVLTAYQRVSAEMQVRVRMRETMNDSENFFHLKNITAEPLLPGAVPLNGVPEGLFNKALVGGIRTVEIEPPPPDQ
Ga0208991_10858912	3300027681	Forest Soil	MLTAYQRITAEFQIRGRLRETINDPEPLFHLRNVSAEPLLPGAVALNGVPEGLFNKSMVCGIRTIEPEPPPPDQVMEMVRRYVMFQAGTFMV
Ga0208989_102415522	3300027738	Forest Soil	MAINATLAWTKVDVLTSYQRLTAEIQIRGRLFPTINDPEPMFHLRNVSAEPLVPGAVPLNGVPEGLFNKALIGGIRSIEPEPPPPDQVLDLTRRYVM
Ga0209689_11210532	3300027748	Soil	MQSSGSLGVPSPWTKVDVLTAYERLTAEIQVRGRLRETMIDPEPLFHLHNISAEPLLPGAVPLNGVPEGLFNKALIGGIRTIEPEPPPPDQV
Ga0209689_12407082	3300027748	Soil	MQQPTAGAIGIANWTKVDVLTPYQRLTGEMQIRGRMRETLNDQESLFHMRNVSAEPLLPGAVQLNGVPEGLFNKALIGGIRTIDPEP
Ga0209180_106579682	3300027846	Vadose Zone Soil	MSALNPNIVWAKVDVLTAYQRLTAEIQIRGRLRDTINDPEPLFHLRNVSAEPLVPGAVPLNGVPEGLFNKGAVCGIRTIEPEVPL
Ga0209166_102760002	3300027857	Surface Soil	MSPTTASINPAVAWSKVDVLTPYQRITAEIQMRGRLRETMNDPEPLFHMRNVSAEPLLPGAVQLNGVPEGVFNKALVGGIRTIEPEPPPPDQVMEIVRRYV
Ga0209579_105686222	3300027869	Surface Soil	MQIGQLNWAKVDVLTAYERITAEIQVRGRLRETMNDPELLFHLRNISAEPLVPGAVALNGVPEGLFNKSFVCAIRTLEA
Ga0209283_108171032	3300027875	Vadose Zone Soil	MSALNPNIVWAKVDVLTAYQRLTAEIQIRGRLRDTINDPEPLFHLRNVSAEPLVPGAVPLNGVPEGLFNKGAVCGIRTIEPEVPLPDQPEQIRRF
Ga0209590_105951611	3300027882	Vadose Zone Soil	MINPNIAWTRVDVLTAYQRLTGEIQIRGRLRETINDPEPFFHLRNVSAEPLLPGAVPLNGVPEGLFNKALIGGIRTIEAEPPPPDQPEVTRRYAMFQAG
Ga0209168_102605062	3300027986	Surface Soil	MSSPSAGFTSANLSWSKVDVLTSSQRMTAEIQVRGGRLRETINDPEPLFHLRNVSAEPLVPGAVPLSGIPEGLF
Ga0222749_103437871	3300029636	Soil	MSQTLGTAGALVWSKVDVLTAYQRVSAEMQVRVRMRETMNDSENFFHLRNITAEPLLPGAVPLNGVPEGLFNKGLVGGIRTIEIEP
Ga0222749_108244941	3300029636	Soil	MSQPMGSVGPSIAWVKVDVLTSYQRITAEMQIRGRLRDTMNDPESLFHLRNVTAEPLQAGAVPLNGVPEGTFNKMAVCGIRTIEAEPPLPDQPEVIRRFVMFQ
Ga0318542_106516642	3300031668	Soil	MSTPSGAFGAANLSWSKVDVLTAFERLTAEIQVRGGRLRETINDPEPLFHLRNVSAEPLIPGAVPLTGIPEGLFNKNLVGGIRSIEPEPP
Ga0307468_1006887321	3300031740	Hardwood Forest Soil	MLNTAVTWSKVDVLTAYQRLTGEIQMRVRLRETMNDPEPLFHLRNVSAEPLLPGAVALNGVPEGLFSKALVGGIRTVEAEPPPPDQLEVTRRYA
Ga0307479_113233731	3300031962	Hardwood Forest Soil	MSSPSGGFAAANLSWSKVDVLTSFERLTAEIQVRGGRLRETINDPEPLFHLRNVSAEPLVSGAVPLSGVPEGLFNKDFVGGIRTVDPEPPPPDLIA
Ga0307479_114262041	3300031962	Hardwood Forest Soil	VLTSFERLTAELQVRGGRLGQTINDPEPLFHLRNVSAEALVAGAVPLSGVPEGLFNKANIGGIRTIEPEPPPADQVPDLIRRYIMFQA
Ga0307470_107554571	3300032174	Hardwood Forest Soil	MIQTSGMISTPVSWTKVDMLTAYQRLTGEIQMRVRLRETMNDPEPLFHLRNVSAEPLLPGAVALNGVPEGLFNKAMVGGIRTVEPEPPPPDQLEVTRRYAMFQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053207

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences