Metagenome / Metatranscriptome Family F053157

Basic Information
Family ID	F053157
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	72 residues
Representative Sequence	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTGEKEKERIKLVIAGALECRQITASLMNDMPKTTPPGEN
Number of Associated Samples	116
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.27 %
% of genes near scaffold ends (potentially truncated)	26.24 %
% of genes from short scaffolds (< 2000 bps)	78.72 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Most Common Taxonomy
Group	Bacteria (95.745 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (11.348 % of family members)
Environment Ontology (ENVO)	Unclassified (24.823 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (28.369 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.00% β-sheet: 0.00% Coil/Unstructured: 45.00%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
a.29.6.0: automated matches	d1xg2b1	1xg2	0.90721
a.2.6.1: HR1 repeat	d1cxzb_	1cxz	0.90586
a.47.2.1: t-snare proteins	d1fioa_	1fio	0.89919
a.25.1.1: Ferritin	d1nfva_	1nfv	0.8858
a.2.5.1: Prefoldin	d1fxka_	1fxk	0.87938

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF02954	HTH_8	50.35
PF04545	Sigma70_r4	9.93
PF00583	Acetyltransf_1	3.55
PF03061	4HBT	2.13
PF14803	Nudix_N_2	1.42
PF02518	HATPase_c	1.42
PF13673	Acetyltransf_10	0.71
PF10589	NADH_4Fe-4S	0.71
PF01370	Epimerase	0.71
PF00753	Lactamase_B	0.71
PF10418	DHODB_Fe-S_bind	0.71
PF13185	GAF_2	0.71
PF02581	TMP-TENI	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG0352	Thiamine monophosphate synthase	Coenzyme transport and metabolism [H]	0.71

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.74 %
Unclassified	root	N/A	4.26 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.74 %
Unclassified	root	N/A	4.26 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.74 %
Unclassified	root	N/A	4.26 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	53.19 %
Unclassified	root	N/A	4.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.55 %
Aquificae	phylum	All Organisms → cellular organisms → Bacteria → Aquificae	0.71 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	50.35 %
Unclassified	root	N/A	4.26 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.55 %
Aquificae	class	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.35 %
Unclassified	root	N/A	4.26 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.55 %
Aquificales	order	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae → Aquificales	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.35 %
Unclassified	root	N/A	4.26 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.55 %
Aquificaceae	family	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae → Aquificales → Aquificaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.35 %
Unclassified	root	N/A	4.26 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.55 %
Aquifex	genus	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae → Aquificales → Aquificaceae → Aquifex	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.35 %
Unclassified	root	N/A	4.26 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.55 %
Aquifex aeolicus	species	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae → Aquificales → Aquificaceae → Aquifex → Aquifex aeolicus	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0957997	All Organisms → cellular organisms → Bacteria	2593	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101288734	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101834317	All Organisms → cellular organisms → Bacteria	32327	Open in IMG/M
3300000789\|JGI1027J11758_12820681	All Organisms → cellular organisms → Bacteria	1609	Open in IMG/M
3300001213\|JGIcombinedJ13530_103445597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1292	Open in IMG/M
3300003267\|soilL1_10066370	All Organisms → cellular organisms → Bacteria → Acidobacteria	3212	Open in IMG/M
3300003432\|JGI20214J51088_10237241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1272	Open in IMG/M
3300003994\|Ga0055435_10038352	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300003995\|Ga0055438_10039161	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300003999\|Ga0055469_10288488	All Organisms → cellular organisms → Bacteria → Aquificae → Aquificae → Aquificales → Aquificaceae → Aquifex → Aquifex aeolicus	529	Open in IMG/M
3300004024\|Ga0055436_10152831	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300004156\|Ga0062589_101789686	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300004156\|Ga0062589_102793376	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	509	Open in IMG/M
3300004463\|Ga0063356_102778139	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300004463\|Ga0063356_103221856	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	703	Open in IMG/M
3300004643\|Ga0062591_101754723	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300005172\|Ga0066683_10027174	All Organisms → cellular organisms → Bacteria	3266	Open in IMG/M
3300005174\|Ga0066680_10208171	All Organisms → cellular organisms → Bacteria	1237	Open in IMG/M
3300005181\|Ga0066678_10481356	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300005183\|Ga0068993_10042647	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300005205\|Ga0068999_10051938	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300005290\|Ga0065712_10451476	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300005294\|Ga0065705_10879155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300005331\|Ga0070670_101706958	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	579	Open in IMG/M
3300005332\|Ga0066388_100059304	All Organisms → cellular organisms → Bacteria	4034	Open in IMG/M
3300005332\|Ga0066388_102011988	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300005332\|Ga0066388_102497537	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300005353\|Ga0070669_100139288	All Organisms → cellular organisms → Bacteria	1869	Open in IMG/M
3300005441\|Ga0070700_101484289	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300005446\|Ga0066686_10021637	All Organisms → cellular organisms → Bacteria → Acidobacteria	3618	Open in IMG/M
3300005459\|Ga0068867_100920971	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300005471\|Ga0070698_100902590	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300005617\|Ga0068859_101151022	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	854	Open in IMG/M
3300005713\|Ga0066905_100330837	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300005764\|Ga0066903_100810204	All Organisms → cellular organisms → Bacteria	1677	Open in IMG/M
3300005829\|Ga0074479_10020700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300005836\|Ga0074470_10381692	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	8244	Open in IMG/M
3300005836\|Ga0074470_11611426	All Organisms → cellular organisms → Bacteria	9409	Open in IMG/M
3300005836\|Ga0074470_11710487	All Organisms → cellular organisms → Bacteria	44805	Open in IMG/M
3300006046\|Ga0066652_100387403	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300006797\|Ga0066659_10311978	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300006844\|Ga0075428_100001369	All Organisms → cellular organisms → Bacteria	25918	Open in IMG/M
3300006845\|Ga0075421_100002233	All Organisms → cellular organisms → Bacteria	23045	Open in IMG/M
3300006845\|Ga0075421_101945673	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	628	Open in IMG/M
3300006852\|Ga0075433_10000543	All Organisms → cellular organisms → Bacteria	24788	Open in IMG/M
3300006852\|Ga0075433_10120838	All Organisms → cellular organisms → Bacteria	2326	Open in IMG/M
3300006852\|Ga0075433_10906461	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300006854\|Ga0075425_101304326	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300006871\|Ga0075434_100413383	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300007004\|Ga0079218_12159410	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300007076\|Ga0075435_100194845	All Organisms → cellular organisms → Bacteria	1716	Open in IMG/M
3300009012\|Ga0066710_100001070	All Organisms → cellular organisms → Bacteria	19271	Open in IMG/M
3300009098\|Ga0105245_13049074	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300009137\|Ga0066709_100044838	All Organisms → cellular organisms → Bacteria	4908	Open in IMG/M
3300009147\|Ga0114129_10396678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1819	Open in IMG/M
3300009147\|Ga0114129_13282557	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300009162\|Ga0075423_10876120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	951	Open in IMG/M
3300009678\|Ga0105252_10426549	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300010047\|Ga0126382_10529378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	954	Open in IMG/M
3300010362\|Ga0126377_11055352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	880	Open in IMG/M
3300010366\|Ga0126379_12799734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300010400\|Ga0134122_12432891	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300011416\|Ga0137422_1132987	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300012041\|Ga0137430_1245526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300012198\|Ga0137364_10488322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	925	Open in IMG/M
3300012922\|Ga0137394_10361083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1240	Open in IMG/M
3300012925\|Ga0137419_11525874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300012930\|Ga0137407_10934081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300012948\|Ga0126375_10391725	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1001	Open in IMG/M
3300012948\|Ga0126375_11125154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300014262\|Ga0075301_1129814	Not Available	571	Open in IMG/M
3300014269\|Ga0075302_1154924	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300014876\|Ga0180064_1113163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300015200\|Ga0173480_10494756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300015245\|Ga0137409_11043083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300015259\|Ga0180085_1067218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1036	Open in IMG/M
3300015371\|Ga0132258_10011770	All Organisms → cellular organisms → Bacteria	18350	Open in IMG/M
3300015371\|Ga0132258_13605926	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300016371\|Ga0182034_11145897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300017792\|Ga0163161_10831246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300017959\|Ga0187779_10610545	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300017966\|Ga0187776_11379230	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300018053\|Ga0184626_10084097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1346	Open in IMG/M
3300018059\|Ga0184615_10124199	Not Available	1456	Open in IMG/M
3300018060\|Ga0187765_11390947	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300018063\|Ga0184637_10019958	All Organisms → cellular organisms → Bacteria	4032	Open in IMG/M
3300018064\|Ga0187773_10552088	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300018072\|Ga0184635_10390245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300018076\|Ga0184609_10464184	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300018078\|Ga0184612_10192516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1061	Open in IMG/M
3300018078\|Ga0184612_10272924	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	871	Open in IMG/M
3300018081\|Ga0184625_10650813	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300018083\|Ga0184628_10056071	All Organisms → cellular organisms → Bacteria	1993	Open in IMG/M
3300018089\|Ga0187774_10637579	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300018469\|Ga0190270_10206056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1667	Open in IMG/M
3300019458\|Ga0187892_10000260	All Organisms → cellular organisms → Bacteria	140554	Open in IMG/M
3300019458\|Ga0187892_10003428	All Organisms → cellular organisms → Bacteria	29041	Open in IMG/M
3300019458\|Ga0187892_10011263	All Organisms → cellular organisms → Bacteria	11026	Open in IMG/M
3300019487\|Ga0187893_10015981	All Organisms → cellular organisms → Bacteria	9981	Open in IMG/M
3300019487\|Ga0187893_10095696	All Organisms → cellular organisms → Bacteria	2646	Open in IMG/M
3300020063\|Ga0180118_1130980	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	790	Open in IMG/M
3300020186\|Ga0163153_10017522	All Organisms → cellular organisms → Bacteria	6140	Open in IMG/M
3300025322\|Ga0209641_10036650	All Organisms → cellular organisms → Bacteria → Acidobacteria	3808	Open in IMG/M
3300025327\|Ga0209751_10699792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300025549\|Ga0210094_1019573	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1080	Open in IMG/M
3300025923\|Ga0207681_10397065	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1113	Open in IMG/M
3300025923\|Ga0207681_11058395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300025925\|Ga0207650_11183747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300026296\|Ga0209235_1048965	Not Available	2046	Open in IMG/M
3300026327\|Ga0209266_1047166	Not Available	2146	Open in IMG/M
3300026344\|Ga0256800_1001928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	922	Open in IMG/M
3300027680\|Ga0207826_1032631	All Organisms → cellular organisms → Bacteria	1446	Open in IMG/M
3300027880\|Ga0209481_10414936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300027902\|Ga0209048_10591491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300027909\|Ga0209382_10187538	Not Available	2377	Open in IMG/M
3300027909\|Ga0209382_11080402	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	830	Open in IMG/M
3300027909\|Ga0209382_11129513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	807	Open in IMG/M
3300028380\|Ga0268265_12127154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300031547\|Ga0310887_10129567	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1295	Open in IMG/M
3300031562\|Ga0310886_10170886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1162	Open in IMG/M
3300031716\|Ga0310813_11425119	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300031834\|Ga0315290_10107631	All Organisms → cellular organisms → Bacteria	2360	Open in IMG/M
3300031834\|Ga0315290_10181095	All Organisms → cellular organisms → Bacteria	1825	Open in IMG/M
3300031834\|Ga0315290_11697916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300031873\|Ga0315297_10446873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1086	Open in IMG/M
3300031890\|Ga0306925_11131570	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	789	Open in IMG/M
3300031997\|Ga0315278_10051124	All Organisms → cellular organisms → Bacteria	4049	Open in IMG/M
3300031997\|Ga0315278_10882653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300032075\|Ga0310890_11218989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300032177\|Ga0315276_10888940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	951	Open in IMG/M
3300032180\|Ga0307471_102568595	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300032516\|Ga0315273_10221370	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2583	Open in IMG/M
3300032516\|Ga0315273_11359173	Not Available	883	Open in IMG/M
3300032516\|Ga0315273_11637421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300032770\|Ga0335085_12271577	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300032782\|Ga0335082_10734160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	849	Open in IMG/M
3300032828\|Ga0335080_11136894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	788	Open in IMG/M
3300033004\|Ga0335084_11827395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300033233\|Ga0334722_10445170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	933	Open in IMG/M
3300033408\|Ga0316605_12151959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300034354\|Ga0364943_0091817	All Organisms → cellular organisms → Bacteria → Acidobacteria	1052	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.01%
Host-Associated	Host-Associated	21.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.23%
Aquatic	Environmental → Aquatic	29.79%
Plants	Host-Associated → Plants	21.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	43.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.60%
Sediment	Environmental → Aquatic → Sediment	12.77%
Freshwater	Environmental → Aquatic → Freshwater	10.64%
Marine	Environmental → Aquatic → Marine	6.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.38%
Cave	Environmental → Terrestrial → Cave	3.55%
Floodplain	Environmental → Terrestrial → Floodplain	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	28.37%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.06%
Lake	Environmental → Aquatic → Freshwater → Lake	8.51%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.51%
Loam	Environmental → Terrestrial → Soil → Loam	7.09%
Wetlands	Environmental → Aquatic → Marine → Wetlands	6.38%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.26%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	3.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.13%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.71%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.71%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.71%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.06%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.64%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.51%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	7.80%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.26%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.55%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	3.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.13%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.13%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.13%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.42%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.42%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.71%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.71%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.71%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.71%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.35%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	7.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.80%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.38%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.26%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.55%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.55%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.55%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.55%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	2.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.13%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.13%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	2.13%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.42%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.42%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.42%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	1.42%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.42%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.42%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.71%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.71%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.71%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.71%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.71%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.71%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300003995	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2	Environmental	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004024	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005205	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011416	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT551_2	Environmental	Open in IMG/M
3300012041	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300014262	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D1	Environmental	Open in IMG/M
3300014269	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D1	Environmental	Open in IMG/M
3300014876	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200_16_10D	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300020063	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020186	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP6.IB-1	Environmental	Open in IMG/M
3300025322	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025549	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026344	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 C5	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_09579973	2228664022	Soil	MDFDFQEARNSLHQLNNKIAQILAYAELLQMGLTHDKQRERIKLVIAGALESREITARLMQNMPKE
INPhiseqgaiiFebDRAFT_1012887342	3300000364	Soil	MDFDFQKARNSLHQLNNKVAQILAYAELMQLGLTGEKEKERIRLVIAGALECRQITASLMNDMPKTTPPGEN*
INPhiseqgaiiFebDRAFT_10183431722	3300000364	Soil	MDFDFQEARNSLHQLNNKIAQILAYAELLQMGLTHDKQRERIKLVIAGALESREITARLMQNMPKE*
JGI1027J11758_128206811	3300000789	Soil	ARNSLHQLNNKIAQILAYAELLQMGLTHDKQRERIKLVIAGALESREITARLMQNMPKE*
JGIcombinedJ13530_1034455972	3300001213	Wetland	MELDLNKTRDSLHQLNNKIAQVLAYAELLQLSLSSDREKERIKLVIRGALEARDIIAALMSELPRIEHSTE*
soilL1_100663704	3300003267	Sugarcane Root And Bulk Soil	MGFDFENARLSLHRLNNKIAQILVYAELIQLNLSNERDKERIKVVISGALESAEITNKLMKEMSEGEVPSGP*
JGI20214J51088_102372413	3300003432	Wetland	MELDFQEARSCLHQLNNKISQVLVYSELLQMSVTGEKERERLKIIISGALESRELTAKLMSLFPKPDSHGQAGP*
Ga0055435_100383521	3300003994	Natural And Restored Wetlands	MDFDFLEARNSLHQLNNKIAQILAYAELLQMGLTEEKQKERIRLVVAGALESREITAKLMQSMPKVESPKNI*
Ga0055438_100391612	3300003995	Natural And Restored Wetlands	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTSDKEKERIKLVIAGALECRQITASLMTDMPKTTPPGEN*
Ga0055469_102884881	3300003999	Natural And Restored Wetlands	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLSGEKEKERIRLVIAGALECRQITASLMNDMPKTAPPGEN*
Ga0055436_101528312	3300004024	Natural And Restored Wetlands	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTSDKEKERIKLVIAGALECRQITASLMTDMPKTTQPGEN*
Ga0062589_1017896862	3300004156	Soil	MDFDFQKARNSLHQLNNKVAQILAYAELMQLGLTGEKEKERIKLVIAGALECRQITASLMNDMPKTTPPGE
Ga0062589_1027933761	3300004156	Soil	MDFDFQKARNSLHQLNNKIAQVLAYAELLQLSLAGEKEKERIKLVIAGALESREITARLMNDMPKTDYPGQASPR*
Ga0063356_1027781391	3300004463	Arabidopsis Thaliana Rhizosphere	KARKSLHQLNNKVAQILAYAELMQLGLTGEKEKERIKLVIAGALECRQITASLMNDMPKTTPPGEN*
Ga0063356_1032218562	3300004463	Arabidopsis Thaliana Rhizosphere	MDFDFQKARNSLHQLNNKIAQVLAYAELLQLSLAGEKEKERIKLVIAGALESREITARLM
Ga0062591_1017547232	3300004643	Soil	MDFDFQKARNSLHQLNNKIAQVLAYAELLQLSLAGEKEKERIKLVIAGALESREITARLMNDMPRTDYPGQASPR*
Ga0066683_100271741	3300005172	Soil	MDFDFHEARNSLHQLNNKIAQILAYAELLQMSLTNEKQKERIKLVIAGALESREITAKLMRDMPKVGPTQEA*
Ga0066680_102081712	3300005174	Soil	MNFDFREARNSLHQLNNKIAQILAYAELLQMGLTNEKQKERIKLVIAGALESREITAKLMRDMPKVGPAHEA*
Ga0066678_104813562	3300005181	Soil	LHQLNNKIAQILAYAELLQMGLTNEKQKERIKLVIAGALESREITAKLMRDMPKVGPAHEA*
Ga0068993_100426472	3300005183	Natural And Restored Wetlands	MKLDLNKTRDSLHQLNNKVAQVLAYAELMQLSLDSDKEKERIKLVIKGALEARDIIAALMTELPRSEHPTE*
Ga0068999_100519383	3300005205	Natural And Restored Wetlands	CGWWWPFHPMKGISMDFDFQKARNSLHQLNNKVAQILAYAELMQLSLSGEKEKERIKLVIAGALECRQITAGLMNDMPKTTPPGEN*
Ga0065712_104514763	3300005290	Miscanthus Rhizosphere	FQKARNSLHQLNNKIAQVLAYAELLQLSLAGEKEKERIKLVIAGALESREITARLMNDMPRTDYPGQASPR*
Ga0065705_108791551	3300005294	Switchgrass Rhizosphere	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTGEKEKERIKLVIAGALECRQITASLMTDMPKTTPPGEN*
Ga0070670_1017069581	3300005331	Switchgrass Rhizosphere	MERGSVMDFDFQKARNSLHQLNNKIAQVLAYAELLQLSLAGEKEKERIKLVIAGALESREITARLMNDMPRTDYPGQASPR*
Ga0066388_1000593042	3300005332	Tropical Forest Soil	MDFDFQEARNSLHQLNNKIAQILAYAELLQMGLTHEKQRERIKLVIAGALESREITSRLMQNMPKGES*
Ga0066388_1020119881	3300005332	Tropical Forest Soil	MDFDFQEARNSLHQLNNKIAQILAYAEFLQMSFSQEKQKERIKLVIVGALESREITAKLMQSMPKDESLHT*
Ga0066388_1024975371	3300005332	Tropical Forest Soil	MDFDFEKARNSLHQLNNKVAQVLAYAELMQLSLTGEKEKERIRLIIAGALECRQITAGLMNDIPKTTTP
Ga0070669_1001392882	3300005353	Switchgrass Rhizosphere	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTGEKEKERIKLVIAGALECRQITASLMNDMPKT
Ga0070700_1014842893	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	KARNSLHQLNNKVAQILAYAELMQLGLTGEKEKERIKLVIAGALECRQITASLMNDMPKTTPPGEK*
Ga0066686_100216372	3300005446	Soil	MDFDFREARNSLHQLNNKIAQILAYAELLQMSLTNEKQKERIKLVIAGALESREITAKLMRDMPKVGPTQEA*
Ga0068867_1009209713	3300005459	Miscanthus Rhizosphere	SMDFDFQKARNSLHQLNNKVAQILAYAELMQLGLTGEKEKERIKLVIAGALECRQITASLMNDMPKTTPPGEN*
Ga0070698_1009025901	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTGEKEKERIKLVIAGALECRQITASLMTDMPKAALPGEN*
Ga0068859_1011510222	3300005617	Switchgrass Rhizosphere	MDFDFQKARNSLHQLNNKVAQILAYAELMQLGLTGEKEKERIKLVIAGALECRQITASLMNDMPKTTPPGEN*
Ga0066905_1003308373	3300005713	Tropical Forest Soil	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTGEKEKERIKLVIAGALECRQITAGLMNDMPKISPSRES*
Ga0066903_1008102042	3300005764	Tropical Forest Soil	MDFDFQEARNSLHQLNNKIAQILAYAELLQMGLTQDKQKERIKLVIAGALESREITAKLMHQMPKVEPFKP*
Ga0074479_100207001	3300005829	Sediment (Intertidal)	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTGEKEKERIKLVIAGALECRQITASLMTDMPKATLPGEN*
Ga0074470_103816923	3300005836	Sediment (Intertidal)	MELDLNKTRDSLHQLNNKIAQVLAYAELLQLSLSSDREKERIKLIIRGALEARDIIAALMSELPRSEHSTE*
Ga0074470_116114263	3300005836	Sediment (Intertidal)	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTSDKEKERIKLVIAGALECRQITASLMTDLPKTTPSGEN*
Ga0074470_1171048732	3300005836	Sediment (Intertidal)	MDFDFQEARNSLHQLNNKIAQILAYAELLQMSLTQEKQKERIRLVIAGALESREITAKLMQSMPKGESFHIT*
Ga0066652_1003874031	3300006046	Soil	MDFDFREARNSLHQLNNKIAQILAYAELLQMSLTNEKQKERIKLVIAGALESREITAKLMRDMPKVSPTQEA*
Ga0066659_103119782	3300006797	Soil	MDFDFREARNSLHQLNNKIAQILAYAELLQMSLTNDKQQERIKLVIAGALEAREITAKLMRDMPKVDPAHKA*
Ga0075428_10000136911	3300006844	Populus Rhizosphere	MDFDFQKARNSLHQLNNKVAQILAYAELMQLGLTGEKEKERIKLVIAGALECRQITASLMNDMPKTTPPGEK*
Ga0075421_1000022333	3300006845	Populus Rhizosphere	MDFDFEKARNSLHQLNNKIAQILAYAELLQLSLTSEKDKERIKFVVTGALESRRIAASLMSDMPKADLRK*
Ga0075421_1019456732	3300006845	Populus Rhizosphere	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTGEKEKERIKLVIAGALECRQITASLMTDMPKANPPGES*
Ga0075433_1000054312	3300006852	Populus Rhizosphere	MNFDFQEARNSLHQLNNKIAQILAYAELLQMSLSQEKQKERIKLVIAGALESREITAKLMQSMPKGESLHT*
Ga0075433_101208381	3300006852	Populus Rhizosphere	DREVELVVRREGHMDFDFEKVRNSLHQLNNKVAQVLAYAELMQLSLTGEKEKERIRLIIAGALECRQITASLMRDIPKTAAPGES*
Ga0075433_109064611	3300006852	Populus Rhizosphere	NSLHQLNNKVAQILAYAELMQLSLTGEKEKERIKLVIAGALECRQITSSLMHDMPKATLPGEN*
Ga0075425_1013043262	3300006854	Populus Rhizosphere	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTGEKEKERIKLVIAGALECRQITSSLMHDMPKATLPGEN*
Ga0075434_1004133833	3300006871	Populus Rhizosphere	MDFDFEKVRNSLHQLNNKVAQVLAYAELMQLSLTGEKEKERIRLIIAGALECRQITASLMRDIPKTAAPGES*
Ga0079218_121594101	3300007004	Agricultural Soil	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLMGEKEKERIKLVIAGALECRQITASLMNDMPKTTPPGEN*
Ga0075435_1001948452	3300007076	Populus Rhizosphere	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTGEKEKERIKLVIAGALECRQITSSLMHDMPKATLPEEN*
Ga0066710_1000010702	3300009012	Grasslands Soil	MDFDFREARNSLHQLNNKIAQILAYAELLQMSLTNDKQQERIKLVIAGALEAREITAKLMRDMPKVDPAHKA
Ga0105245_130490741	3300009098	Miscanthus Rhizosphere	MDFDFQKARNSLHQLNNKVAQILAYAELMQLGLTGEKEKERIKLVIAGALECRQITAGLMNDMPKTTPPGEN*
Ga0066709_1000448385	3300009137	Grasslands Soil	MDFDFREARNSLHQLNNKIAQILAYAELLHMSLTNDKQHERIKLVIAGALEAREITAKLMRDMPKVDPAHKA*
Ga0114129_103966783	3300009147	Populus Rhizosphere	MDFDFQKARNSLHQMNNKVAQILAYAELMQLGLTGEKEKERIRFIIAGALECRQITASLMTDMPKTTLPGEN*
Ga0114129_132825571	3300009147	Populus Rhizosphere	MGFDFQNARLSLHTLNNKIAQILVYAELVQMNLSNERDKERIKVVISGALESREITNKLMKEMSEGEVPFEM*
Ga0075423_108761202	3300009162	Populus Rhizosphere	MGFDLQNARLSLHKLNNKIAQILVYAELIQLNLANERDKERIKVVISGALESREITNKLMKEMSEGEVPLEP*
Ga0105252_104265492	3300009678	Soil	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTGEKEKERIKLVIAGALECRQITASLMNDMPRTTPPGEN*
Ga0126382_105293783	3300010047	Tropical Forest Soil	MDFDFEKARNSLHQLNNKVAQVLAYAELMQLSLTGEKEKERIRLIIAGALECRQITAGLMNDIPKTTTPRKS*
Ga0126377_110553522	3300010362	Tropical Forest Soil	MDFDFEKARNSLHQLNNKVAQVLAYAELMQLSLTGEKEKERIRLIIAGALECRQITASLMSDIPKTATPRKS*
Ga0126379_127997342	3300010366	Tropical Forest Soil	MDFDFQEARNSLHQLNNKIAQILAYAELLQMGLTHEKQRERIKLVIAGALESREITSRLMQNMPKRES*
Ga0134122_124328912	3300010400	Terrestrial Soil	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTGEKEIERIKLVIAGALECRQITASLMTDMPKAALPGE
Ga0137422_11329872	3300011416	Soil	LHQLNNKVAQILAYAELMQLGLTGEKEKERIKLVIAGALECRQITASLMNDMPKTTPPGEN*
Ga0137430_12455261	3300012041	Soil	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTGEKEKERIKLVIAGALECRQITASLMTDMPKTTPPGES*
Ga0137364_104883221	3300012198	Vadose Zone Soil	MDFDFREARNSLHQLNNKIAQILAYAELLQMSLTNEKQKERIRLVIAGALESREITAKLMRDMPKVGPTHEA*
Ga0137394_103610832	3300012922	Vadose Zone Soil	MDFDFQEARNSLHQLNNKIAQILAYAELLQMGLTHEKQRERIRLVIAGALESREITAKLMQNMPKGESHT*
Ga0137419_115258742	3300012925	Vadose Zone Soil	SMDFDFQKARNSLHQLNNKVAQILAYAELMQLSLAGEKEKERIKLVIAGALECRQITASLMNDMPTAALPGED*
Ga0137407_109340811	3300012930	Vadose Zone Soil	RRMDFDFQEARNSLHQLNNKIAQILAYAELLQMGLTHEKQKERIKLVIAGALESREITAKLMQNMPKGEFFPNT*
Ga0126375_103917252	3300012948	Tropical Forest Soil	MDFDFQEARNSLHQLNNKIAQILAYAELLQMSLSQEKQKERIKLVIAGALESREITAKLMQSMPKGESLHT*
Ga0126375_111251542	3300012948	Tropical Forest Soil	MDFDFQKARNSLHQLNNKVAQVLAYAELMQLSLTGEKEKERIKLIIAGALECRQITASLMSDIPKTTPPGES*
Ga0075301_11298142	3300014262	Natural And Restored Wetlands	MRLDLNKTRDSLHQLNNKVAQVLAYAELMQLSLESEKEKERIKLVIKGALEARDIIAVLMTGLPRSEHPTE*
Ga0075302_11549242	3300014269	Natural And Restored Wetlands	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTSDKEKERIKLVIAGALECRQITASLMTDMPKTTPSGEN*
Ga0180064_11131633	3300014876	Soil	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTGEKEKERIKLVIAGALECRQITASLMNDMPKTTPTGEN*
Ga0173480_104947561	3300015200	Soil	SEIRHRSSEWPFRSRRAIHGFHFQKARNSLHQLNNKVAQILAYAELMQLSLTGEKEKERIKLVIAGALECRQITASLMNDMPKTTPPGEK*
Ga0137409_110430831	3300015245	Vadose Zone Soil	MDFDFQEARNSLHQLNNKIAQILAYAELLQMGLTHEKQKERIRLVIAGALESREITAKLMQNMPKGESYT*
Ga0180085_10672183	3300015259	Soil	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTGEKEKERIRLVIAGALECRQITASLMNDMPRTTPPGEN*
Ga0132258_100117706	3300015371	Arabidopsis Rhizosphere	MDFDFEETRNLLHQLNNKIAQILAYAELLQMGLTQDKQKERIKLVIAGALESREITAKLMHQMPKTEPFKP*
Ga0132258_136059262	3300015371	Arabidopsis Rhizosphere	MELDLNKTRDSLHQLNNKVAQVLAYSELLQLSLNSEKEKERIKLVIKGALEARDIIAALMTDLPRSEHPTE*
Ga0182034_111458971	3300016371	Soil	PRMRWTMDFDFQEAGNLLHQLNNKIAQILAYAELLQMGLTQDKQKERIKLVIAGALESREITAKLMRQMPKAEPFKP
Ga0163161_108312462	3300017792	Switchgrass Rhizosphere	MDFDFQKARNSLHQLNNKVAQILAYAELMQLGLTGEKEKERIKLVIAGALECRQITASLMNDMPK
Ga0187779_106105452	3300017959	Tropical Peatland	MEYDFNQARNSLHKLNNKIAQILVYAELLQLNLTNEKDKERVKVIISGALESRDITAKLMIEMPKSGDGAGLQP
Ga0187776_113792302	3300017966	Tropical Peatland	MEYDFNQARNSLHKLNNKIAQILVYAELLQLNLTNEKDKERVKVIISGALESRDITAKLMIEM
Ga0184626_100840971	3300018053	Groundwater Sediment	MDFDFQKARNSLHQLNNKVAQILAYAELMQLGLTGEKEKERIKLVIAGALECRQITASLMNDMPKTTPPGES
Ga0184615_101241992	3300018059	Groundwater Sediment	MELDLDKNRDSLHRLNNKVAQILAYAELLQLSLNTDKEKERIKLVIKGALEARDIVATLMAELPRSEHPTE
Ga0187765_113909472	3300018060	Tropical Peatland	MEFNVKKTRDSLHQLNNKVAQILAYAELLQLSLHGDKEKERINLVVKGALEARVIIASLMTEIPRIDPQETHPFNPQ
Ga0184637_100199582	3300018063	Groundwater Sediment	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTGEKEKERIKLVIAGALECRQITASLMNDMPKTAPPGEN
Ga0187773_105520881	3300018064	Tropical Peatland	GKRMDYDFDEARKSLHKLNNKIAQILVYAELLQLSLTNEKDRERIKVIISGALDSRDITAKLMNEMPKAGRDEANLQA
Ga0184635_103902452	3300018072	Groundwater Sediment	DFQKARNSLHQLNNKVAQILAYAELMQLGLTGEKEKERIKLIIAGALECRQITASLMNDMPKNTPPGEN
Ga0184609_104641842	3300018076	Groundwater Sediment	VAVFDPGEASMDFDFQKARNSLHQLNNKVAQILAYAELMQLSLSGEKERERIKLVIAGALECRQITASLMNDMPKTTTPGEN
Ga0184612_101925162	3300018078	Groundwater Sediment	MDFDFQKARNSLHQLNNKVAQILAYAELMQLGLTGEKEKERIKLVIAGALECRQITASLMNDMPKT
Ga0184612_102729242	3300018078	Groundwater Sediment	MDFDFQEARNSLHQLNNKIAQILAYAELLQMGLTHEKQKERIRLVIAGALESREITAKLMQNMPKGESFHT
Ga0184625_106508131	3300018081	Groundwater Sediment	MDFDFQKARNSVHQLNNKVAQILAYAELMQLGLTGEKEKERIKLVIAGALECRQITASLMNDMPKNTPPGEN
Ga0184628_100560712	3300018083	Groundwater Sediment	MDFDFQKARNSLHQLNNKVAQILAYAELMQLGLTGEKEKERIKLVIAGALECRQITASLMNDMPKTTPPGEN
Ga0187774_106375791	3300018089	Tropical Peatland	MDYDFDEARKSLHKLNNKIAQILVYAELLQLSLTNEKDKERIKVIISGALDSRDITAKLMNEMPKAGRDEANLQA
Ga0190270_102060562	3300018469	Soil	MDFDFQKARNSLHQLNNKVAQILAYAELMQLGLTGEKEKERIKLVIAGALECRQITASLMNDMPKTTPTGEN
Ga0187892_1000026040	3300019458	Bio-Ooze	MDFDFEKARFSLHQLNNKIAQILAYAELLQLSLTGDKEKERNRLIITGALEARQITASLMNDMRKSEGPAEG
Ga0187892_1000342810	3300019458	Bio-Ooze	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTGEKEKERIKLVIAGALECRQITASLMTDMPKTTPPGES
Ga0187892_100112635	3300019458	Bio-Ooze	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTGDKEKERIKLVIAGALECRQITSSLMNDMPRITPPGEN
Ga0187893_100159819	3300019487	Microbial Mat On Rocks	MDFDFQRARNSLHQLNNKVAQILAYAELMQLTLTGEKEKERIKLVIAGALECRQITASLMNDMRKTTLPGES
Ga0187893_100956962	3300019487	Microbial Mat On Rocks	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLMGEKEKERIKLVIAGALECRQITASLMNDMPKTTPPGEN
Ga0180118_11309802	3300020063	Groundwater Sediment	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTGEKEKERIRLVIAGALECRQITASLMNDMPRTTPPGEN
Ga0163153_100175225	3300020186	Freshwater Microbial Mat	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTGEKEKERIKLVIAGALECRQITASLMNDMPKSTPHGEG
Ga0209641_100366503	3300025322	Soil	MELDLSKTRNSLHQLNNKIAQILAYAELLQLSLTNEKEKERIKLIIKGALDARDIIAVLMTEIPRSEQG
Ga0209751_106997922	3300025327	Soil	MEFDFQKARNSLHQLNNKVAQILAYAELMQLSLTGEKEKERIKLVIAGALECRQITASLMYDMPRTTPPGEN
Ga0210094_10195733	3300025549	Natural And Restored Wetlands	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTSDKEKERIKLVIAGALECRQITASLMTDMPKTTPPGEN
Ga0207681_103970652	3300025923	Switchgrass Rhizosphere	MDFDFQKARNSLHQLNNKIAQVLAYAELLQLSLAGEKEKERIKLVIAGALESREITARLMNDMPKTDYPGQASPR
Ga0207681_110583952	3300025923	Switchgrass Rhizosphere	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTGEKEKERIKLVIAGALECRQITASLMNDMPKTTPPGEK
Ga0207650_111837472	3300025925	Switchgrass Rhizosphere	MDFDFQKARNSLHQLNNKIAQVLAYAELLQLSLAGEKEKERIKLVIAGALESREITARLMNDMPRTDYPGQASPR
Ga0209235_10489652	3300026296	Grasslands Soil	MDFDFREARNSLHQLNNKIAQILAYAELLQMSLTNEKQKERIKLVIAGALESREITAKLMRDMPKVGPTQEA
Ga0209266_10471661	3300026327	Soil	MDFDFHEARNSLHQLNNKIAQILAYAELLQMSLTNEKQKERIKLVIAGALESREITAKLMRDMPKVGPTQEA
Ga0256800_10019282	3300026344	Sediment	MRVDLNKTRDSLHQLNNKVAQVLAYAELMQLSLENEKEKERIKLVIKGALEARDIIAVLMTELPRSEHLTQ
Ga0207826_10326312	3300027680	Tropical Forest Soil	MEFNFNEARNSLHKLNNKIAQILVYAELLQLSLTNEKDRERIKVIISGALDSRDITAKLMNEMPKPGEDGVNLQA
Ga0209481_104149362	3300027880	Populus Rhizosphere	MDFDFQKARNSLHQLNNKVAQILAYAELMQLGLTGEKEKERIKLVIAGALECRQITASLMNDMPKTTPPGEK
Ga0209048_105914912	3300027902	Freshwater Lake Sediment	MEFDSQEARNCLHQLNNKISQVLVYGELLQMTLTGDKERERLKIIISGALESREITSKLMGLFPKGEPPGPPVSASSSSE
Ga0209382_101875382	3300027909	Populus Rhizosphere	MDFDFEKARNSLHQLNNKIAQILAYAELLQLSLTSEKDKERIKFVVTGALESRRIAASLMSDMPKADLRK
Ga0209382_110804022	3300027909	Populus Rhizosphere	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTGEKEKERIKLVIAGALECRQITASLMTDMPKANPPGES
Ga0209382_111295133	3300027909	Populus Rhizosphere	MDFDFQKARNSLHQMNNKVAQILAYAELMQLGLTGEKEKERIKFIIAGALECRQITASLMTDMPKTTPPGEN
Ga0268265_121271542	3300028380	Switchgrass Rhizosphere	SLHQLNNKIAQVLAYAELLQLSLAGEKEKERIKLVIAGALESREITARLMNDMPRTDYPGQASPR
Ga0310887_101295672	3300031547	Soil	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTGEKEKERIKLVIAGALECRQITASLMNDMPKTTPPGEN
Ga0310886_101708861	3300031562	Soil	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTGEKEKERIKLVIAGALECRQITASLMNDMPKTT
Ga0310813_114251192	3300031716	Soil	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTGEKEKERIKLVIAGALECRQITASLMTDMPKTNPPGEI
Ga0315290_101076313	3300031834	Sediment	MKLDLNKTRDSLHQLNNKVAQVLAYAELMQLSLDSDKEKERIKLVIKGALEARDIIAALMTE
Ga0315290_101810951	3300031834	Sediment	MDFDFQKARNSLHQLNNKVAQILAYAELMQLSLTGEKEKERIKLVIAGALECRQITASLMTDMPKSAPPGEN
Ga0315290_116979161	3300031834	Sediment	MELDLKKTRDSLHQLNNKVAQILNYAELLQLSLNGDKEKERIKLVIKGALEARDIIASLMTELPRSEHPTE
Ga0315297_104468733	3300031873	Sediment	MDFDFQKARNALHQLNNKVAQILAYAELMQLSLTGEKEKERIKLVIAGALECRQITASLMTDMPKTAPPGEN
Ga0306925_111315701	3300031890	Soil	MDFDFQEAGNLLHQLNNKIAQILAYAELLQMGLTQDKQKERIKLVIAGALESREITAKLMRQMPKAE
Ga0315278_100511243	3300031997	Sediment	MKLDLNKTRDSLHQLNNKVAQVLAYAELMQLSLDSDKEKERIKLVIKGALEARDIIAALMTELPRSEHPTE
Ga0315278_108826532	3300031997	Sediment	MDFDFQKARNALHQLNNKVAQILAYAELMQLSLTCEKEKERIKLVIAGALECRQITASLMTDMPKTAPPGEN
Ga0310890_112189892	3300032075	Soil	VMDFDFQKARNSLHQLNNKIAQVLAYAELLQLSLAGEKEKERIKLVIAGALESREITARLMNDMPRTDYPGQPGPG
Ga0315276_108889402	3300032177	Sediment	MEFDFREARKDLHQLNNKISQILVYAELLQMNLGGEKERERLKIIISGALESREITARLQSHMPKPDSPEV
Ga0307471_1025685952	3300032180	Hardwood Forest Soil	RDSLHQLNNKVAQVLAYAELIQLSLNNDKEKERIKLVIKGALEARDIIAVLMTGLPRSEHPTE
Ga0315273_102213704	3300032516	Sediment	MDFDFQKARNALHQLNNKVAQILAYAELMQLSLTGEKEKERIKLVIAGALECRQITASLMTDMPKSAPPGEN
Ga0315273_113591732	3300032516	Sediment	MEFDFQEVRNSLHKLNNKIAQVLVYAELLQLNLTSDKDKERIKIIIAGALESRDITAKLMNDMPKVVRDETSLQP
Ga0315273_116374212	3300032516	Sediment	MELELDKNRDSLHRLNNKVAQILAYAELLQLSLNTDKEKERIRLVIKGALEARDIVATLMAELPRSEHPTE
Ga0335085_122715771	3300032770	Soil	MEYDFNEARNSLHKLNNKIAQILVYAELLQLNLTNEKDKERVKVIISGALESRDITAKLMIEMPKAGDGASLQS
Ga0335082_107341602	3300032782	Soil	MEYDFNQARNSLHKLNNKIAQILVYAELLQLNLTNEKDKERVKVIISGALESRDITAKLMIEMPKSGDGASLQP
Ga0335080_111368941	3300032828	Soil	MEYDFNQARNSLHKLNNKIAQILVYAELLQLNLTNEKDKERVKVIISGALESRDITAKLMIEMPKSGDG
Ga0335084_118273951	3300033004	Soil	IFGWSNRMEYDFNQARNSLHKLNNKIAQILVYAELLQLNLTNEKDKERVKVIISGALESRDITAKLMIEMPKSGDGASLQP
Ga0334722_104451702	3300033233	Sediment	MDFDFQKARNSLHQLNNKIAQILAYAELLQMSLTTEKEKERIKLVISGALESRHITASLMNDMPKADPPLK
Ga0316605_121519591	3300033408	Soil	MELDLNQTRNSLHQLNNKVAQILAYAELLQLSLTNEKEKERIKLIIKGALDARDIIALIMKEIPRSEQG
Ga0364943_0091817_602_817	3300034354	Sediment	MKLDLNKTRDSLHQLNNKVAQVLAYAELMQLSLDNDKEKERIKLVIRGALEARDIIAALMTELPRSEHPTE

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053157

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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