Metagenome / Metatranscriptome Family F053150

Basic Information
Family ID	F053150
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	40 residues
Representative Sequence	VTDKPQEPKQKTPKGLEIPVPKRRDLMDAFRKIVKPPKKP
Number of Associated Samples	98
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	19.29 %
% of genes near scaffold ends (potentially truncated)	15.60 %
% of genes from short scaffolds (< 2000 bps)	80.85 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Most Common Taxonomy
Group	Bacteria (75.887 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (31.915 % of family members)
Environment Ontology (ENVO)	Unclassified (38.298 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.262 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.65% β-sheet: 8.82% Coil/Unstructured: 73.53%
Feature Viewer

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Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF12762	DDE_Tnp_IS1595	60.71
PF01476	LysM	2.14
PF13643	DUF4145	1.43
PF01694	Rhomboid	1.43
PF00817	IMS	0.71
PF01527	HTH_Tnp_1	0.71
PF05157	T2SSE_N	0.71
PF07883	Cupin_2	0.71
PF00753	Lactamase_B	0.71
PF09413	DUF2007	0.71
PF01471	PG_binding_1	0.71
PF00872	Transposase_mut	0.71
PF14579	HHH_6	0.71
PF01609	DDE_Tnp_1	0.71
PF01636	APH	0.71
PF02618	YceG	0.71
PF04029	2-ph_phosp	0.71
PF08281	Sigma70_r4_2	0.71
PF04209	HgmA_C	0.71
PF07755	DUF1611	0.71
PF06210	DUF1003	0.71
PF00398	RrnaAD	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	1.43
COG2045	Phosphosulfolactate phosphohydrolase or related enzyme	Coenzyme transport and metabolism [H]	1.43
COG0030	16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity)	Translation, ribosomal structure and biogenesis [J]	0.71
COG0389	Nucleotidyltransferase/DNA polymerase DinP involved in DNA repair	Replication, recombination and repair [L]	0.71
COG1559	Endolytic transglycosylase MltG, terminates peptidoglycan polymerization	Cell wall/membrane/envelope biogenesis [M]	0.71
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.71
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.71
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.71
COG3367	Uncharacterized conserved protein, NAD-dependent epimerase/dehydratase family	General function prediction only [R]	0.71
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.71
COG3508	Homogentisate 1,2-dioxygenase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.71
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.71
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.71
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.71
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.27 %
Unclassified	root	N/A	17.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.89 %
Unclassified	root	N/A	17.73 %
Viruses	superkingdom	All Organisms → Viruses	6.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.89 %
Unclassified	root	N/A	17.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.38 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	33.33 %
Unclassified	root	N/A	17.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.42 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	31.21 %
Unclassified	root	N/A	17.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.38 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.42 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.71 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.73 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	13.48 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.38 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	1.42 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	0.71 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.71 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.73 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	13.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.38 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	5.67 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.13 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	1.42 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.71 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	0.71 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.38 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	5.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.67 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.13 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1.42 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.71 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	0.71 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.38 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.67 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	3.55 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	2.13 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.13 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	0.71 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples	0.71 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.71 %
Plantibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Plantibacter	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	0.71 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.38 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.67 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	3.55 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	2.13 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.13 %
unclassified Plantibacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Plantibacter → unclassified Plantibacter	0.71 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	0.71 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.71 %
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	0.71 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.38 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.67 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	3.55 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	2.13 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.13 %
Plantibacter sp. MMLR14_011	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Plantibacter → unclassified Plantibacter → Plantibacter sp. MMLR14_011	0.71 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	0.71 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	0.71 %
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	0.71 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908009\|FWIRA_GRAM18401BTZ0T	Not Available	523	Open in IMG/M
2162886013\|SwBSRL2_contig_8894377	All Organisms → cellular organisms → Bacteria	1485	Open in IMG/M
2199352025\|deepsgr__Contig_134762	Not Available	538	Open in IMG/M
3300000858\|JGI10213J12805_10050255	Not Available	584	Open in IMG/M
3300000880\|AL20A1W_1036577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3284	Open in IMG/M
3300001535\|A3PFW1_10102877	All Organisms → cellular organisms → Bacteria	2835	Open in IMG/M
3300001535\|A3PFW1_10391441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2491	Open in IMG/M
3300001538\|A10PFW1_11044549	Not Available	1967	Open in IMG/M
3300001538\|A10PFW1_11183087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1049	Open in IMG/M
3300001686\|C688J18823_10105547	All Organisms → cellular organisms → Bacteria	1957	Open in IMG/M
3300002568\|C688J35102_119236922	Not Available	659	Open in IMG/M
3300002568\|C688J35102_120816083	All Organisms → cellular organisms → Bacteria	1672	Open in IMG/M
3300004114\|Ga0062593_100366779	All Organisms → Viruses → Predicted Viral	1268	Open in IMG/M
3300004479\|Ga0062595_100235005	All Organisms → Viruses → Predicted Viral	1172	Open in IMG/M
3300005172\|Ga0066683_10463384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	776	Open in IMG/M
3300005187\|Ga0066675_11210044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	560	Open in IMG/M
3300005337\|Ga0070682_101549649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	571	Open in IMG/M
3300005435\|Ga0070714_100101243	All Organisms → cellular organisms → Bacteria	2538	Open in IMG/M
3300005467\|Ga0070706_101085027	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300005518\|Ga0070699_100054909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3449	Open in IMG/M
3300005529\|Ga0070741_10540146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1049	Open in IMG/M
3300005538\|Ga0070731_10000206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	101192	Open in IMG/M
3300005552\|Ga0066701_10322890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	957	Open in IMG/M
3300005552\|Ga0066701_10517200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	737	Open in IMG/M
3300005558\|Ga0066698_10639818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	711	Open in IMG/M
3300005559\|Ga0066700_10050254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2558	Open in IMG/M
3300005985\|Ga0081539_10054244	Not Available	2239	Open in IMG/M
3300006028\|Ga0070717_11018863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	754	Open in IMG/M
3300006800\|Ga0066660_10342306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1211	Open in IMG/M
3300006918\|Ga0079216_10971595	Not Available	651	Open in IMG/M
3300009012\|Ga0066710_103540247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300009012\|Ga0066710_103786902	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300009012\|Ga0066710_104047522	Not Available	548	Open in IMG/M
3300009038\|Ga0099829_10125929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2022	Open in IMG/M
3300009089\|Ga0099828_10231833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1652	Open in IMG/M
3300009090\|Ga0099827_10495924	All Organisms → Viruses → Predicted Viral	1049	Open in IMG/M
3300009137\|Ga0066709_100757296	Not Available	1403	Open in IMG/M
3300009137\|Ga0066709_102971853	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300009137\|Ga0066709_103061793	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300009809\|Ga0105089_1074177	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300009818\|Ga0105072_1139329	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300009818\|Ga0105072_1142823	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300009836\|Ga0105068_1090418	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300009837\|Ga0105058_1038607	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300009840\|Ga0126313_10539620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	936	Open in IMG/M
3300009840\|Ga0126313_11352062	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300010039\|Ga0126309_10562131	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300010039\|Ga0126309_10609941	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300010039\|Ga0126309_10854636	Not Available	599	Open in IMG/M
3300010039\|Ga0126309_11128130	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300010145\|Ga0126321_1111636	All Organisms → cellular organisms → Bacteria → Terrabacteria group	726	Open in IMG/M
3300010371\|Ga0134125_12763445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	534	Open in IMG/M
3300010373\|Ga0134128_12793439	Not Available	538	Open in IMG/M
3300011003\|Ga0138514_100109040	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300012003\|Ga0120163_1101702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	629	Open in IMG/M
3300012186\|Ga0136620_10002528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	8674	Open in IMG/M
3300012189\|Ga0137388_10577215	Not Available	1045	Open in IMG/M
3300012201\|Ga0137365_10095540	All Organisms → cellular organisms → Bacteria	2237	Open in IMG/M
3300012201\|Ga0137365_10461832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	934	Open in IMG/M
3300012201\|Ga0137365_10850588	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300012204\|Ga0137374_10000273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	49304	Open in IMG/M
3300012204\|Ga0137374_10011042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10594	Open in IMG/M
3300012204\|Ga0137374_10103617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2674	Open in IMG/M
3300012204\|Ga0137374_10117733	All Organisms → cellular organisms → Bacteria	2452	Open in IMG/M
3300012204\|Ga0137374_10193425	All Organisms → cellular organisms → Bacteria	1760	Open in IMG/M
3300012204\|Ga0137374_10214784	All Organisms → Viruses → Predicted Viral	1643	Open in IMG/M
3300012204\|Ga0137374_10257944	All Organisms → Viruses → Predicted Viral	1457	Open in IMG/M
3300012204\|Ga0137374_10324491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Plantibacter → unclassified Plantibacter → Plantibacter sp. MMLR14_011	1253	Open in IMG/M
3300012204\|Ga0137374_10371902	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300012204\|Ga0137374_10513024	Not Available	928	Open in IMG/M
3300012204\|Ga0137374_10547297	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300012204\|Ga0137374_11115788	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300012206\|Ga0137380_11283718	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300012207\|Ga0137381_10327999	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300012208\|Ga0137376_11258208	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300012209\|Ga0137379_11068601	Not Available	712	Open in IMG/M
3300012209\|Ga0137379_11210777	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300012211\|Ga0137377_10942486	Not Available	794	Open in IMG/M
3300012211\|Ga0137377_11134024	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300012285\|Ga0137370_10263024	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300012354\|Ga0137366_10289978	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300012354\|Ga0137366_10503548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	874	Open in IMG/M
3300012355\|Ga0137369_10634256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	740	Open in IMG/M
3300012356\|Ga0137371_10557674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	882	Open in IMG/M
3300012356\|Ga0137371_10998099	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300012358\|Ga0137368_10143036	Not Available	1777	Open in IMG/M
3300012358\|Ga0137368_10156960	All Organisms → Viruses → Predicted Viral	1673	Open in IMG/M
3300012358\|Ga0137368_10345869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	990	Open in IMG/M
3300012358\|Ga0137368_10789286	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300012360\|Ga0137375_10230250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1728	Open in IMG/M
3300012360\|Ga0137375_10309696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1423	Open in IMG/M
3300012360\|Ga0137375_10692571	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300012360\|Ga0137375_11083349	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300012409\|Ga0134045_1013737	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300012409\|Ga0134045_1013737	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300012469\|Ga0150984_122603516	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300012532\|Ga0137373_10785030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	705	Open in IMG/M
3300012532\|Ga0137373_10813958	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300012532\|Ga0137373_11042928	Not Available	589	Open in IMG/M
3300012684\|Ga0136614_10076141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2544	Open in IMG/M
3300012684\|Ga0136614_10757709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	680	Open in IMG/M
3300013758\|Ga0120147_1000628	All Organisms → cellular organisms → Bacteria	15333	Open in IMG/M
3300013758\|Ga0120147_1035166	Not Available	912	Open in IMG/M
3300013763\|Ga0120179_1060124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	859	Open in IMG/M
3300013768\|Ga0120155_1036946	All Organisms → cellular organisms → Bacteria	1510	Open in IMG/M
3300013772\|Ga0120158_10211588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1002	Open in IMG/M
3300014058\|Ga0120149_1057379	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300014827\|Ga0120171_1055472	Not Available	1174	Open in IMG/M
3300017654\|Ga0134069_1261931	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300017659\|Ga0134083_10606515	Not Available	501	Open in IMG/M
3300017789\|Ga0136617_10844827	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300018028\|Ga0184608_10484496	Not Available	530	Open in IMG/M
3300018053\|Ga0184626_10316392	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300018060\|Ga0187765_10764020	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300018073\|Ga0184624_10446331	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300018079\|Ga0184627_10136961	All Organisms → cellular organisms → Bacteria	1297	Open in IMG/M
3300018422\|Ga0190265_10008205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7634	Open in IMG/M
3300018422\|Ga0190265_10103286	All Organisms → Viruses → Predicted Viral	2678	Open in IMG/M
3300018468\|Ga0066662_10273231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	1399	Open in IMG/M
3300018920\|Ga0190273_10190815	Not Available	1271	Open in IMG/M
3300019888\|Ga0193751_1014299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4074	Open in IMG/M
3300021329\|Ga0210362_1009224	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300025325\|Ga0209341_10070494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2957	Open in IMG/M
3300025327\|Ga0209751_11112201	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300025929\|Ga0207664_10029636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4170	Open in IMG/M
3300025941\|Ga0207711_12061523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300026118\|Ga0207675_102110000	Not Available	580	Open in IMG/M
3300026536\|Ga0209058_1362766	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300027561\|Ga0209887_1088018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	635	Open in IMG/M
3300027577\|Ga0209874_1034555	All Organisms → Viruses → Predicted Viral	1370	Open in IMG/M
3300027748\|Ga0209689_1195743	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300027862\|Ga0209701_10414967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	747	Open in IMG/M
3300027869\|Ga0209579_10000047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	265158	Open in IMG/M
3300028712\|Ga0307285_10143113	All Organisms → cellular organisms → Bacteria → Terrabacteria group	652	Open in IMG/M
3300031228\|Ga0299914_11129882	Not Available	631	Open in IMG/M
3300031938\|Ga0308175_100000034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	112846	Open in IMG/M
3300032069\|Ga0315282_10097681	All Organisms → cellular organisms → Bacteria	2631	Open in IMG/M
3300032770\|Ga0335085_10156344	All Organisms → cellular organisms → Bacteria	2852	Open in IMG/M
3300032955\|Ga0335076_10464469	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300033233\|Ga0334722_10265390	All Organisms → Viruses → Predicted Viral	1258	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.16%
Host-Associated	Host-Associated	2.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.65%
Aquatic	Environmental → Aquatic	8.51%
Plants	Host-Associated → Plants	2.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.94%
Freshwater	Environmental → Aquatic → Freshwater	4.96%
Sediment	Environmental → Aquatic → Sediment	2.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.42%
Marine	Environmental → Aquatic → Marine	0.71%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.05%
Loam	Environmental → Terrestrial → Soil → Loam	7.80%
Sand	Environmental → Terrestrial → Soil → Sand	4.96%
Ice	Environmental → Aquatic → Freshwater → Ice	2.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.13%
Lake	Environmental → Aquatic → Freshwater → Lake	1.42%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.42%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.71%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.71%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	48.23%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.06%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	9.22%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	4.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.26%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	2.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.84%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.13%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.13%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.13%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.42%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.42%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.71%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.71%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.71%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.71%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	31.91%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	9.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.09%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.96%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	4.96%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.55%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	2.84%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.84%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.13%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.13%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.13%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.42%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.42%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.42%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.42%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.71%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.71%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.71%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.71%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.71%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.71%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.71%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908009	Soil microbial communities from sample at FACE Site Metagenome WIR_Amb2	Environmental	Open in IMG/M
2162886013	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000880	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illumina	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009809	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012003	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0.25M	Environmental	Open in IMG/M
3300012186	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ416 (21.06)	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300013758	Permafrost microbial communities from Nunavut, Canada - A24_65cm_12M	Environmental	Open in IMG/M
3300013763	Permafrost microbial communities from Nunavut, Canada - A15_65cm_0M	Environmental	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300014827	Permafrost microbial communities from Nunavut, Canada - A3_80cm_18M	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300021329	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.625 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032069	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053150

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FWIRA_09676070	2124908009	Soil	MAGKSQEPKQTTPKGLEIPVPKRSEVMDAFRKIIKPKPKG
SwBSRL2_0247.00000600	2162886013	Switchgrass Rhizosphere	MSEKPKQKTPKGLEIPVPKRKEVMDALRKLVQPAKKP
deepsgr_02183460	2199352025	Soil	MSGKPQQPAKTQRTDKGLEIPVPKRKEVMDAFRKIVHAPPKKR
JGI10213J12805_100502552	3300000858	Soil	VTDKPQEPKQKTSKGLEVPVPKRREFMDALRKIAKPKKG*
AL20A1W_10365775	3300000880	Permafrost	VTEKPQEPKQTTPKGLEIPVPKRRDLMAAFKKIIQPVKKP*
A3PFW1_101028775	3300001535	Permafrost	MAGNKQEPTQRTPKGLEIPVPTRESIFTAFKKIVQPVKKKP*
A3PFW1_103914412	3300001535	Permafrost	MTGKDQKPIQRTPKGLEIPVPKRKDLMDAFRKIVQPAKKP*
A10PFW1_110445493	3300001538	Permafrost	MTDKPQEPTQKTPKGLEIPVPTRESIFSALRKVIKPVKKS*
A10PFW1_111830872	3300001538	Permafrost	VTDKPQEPTQKTAKGLEIPVPKRRDLMDAFKKLVQPVKKP*
C688J18823_101055473	3300001686	Soil	MADEPKQTTPKGLEIPVPKRRDVMDALKKLVQPIKKH*
C688J35102_1192369222	3300002568	Soil	MAGKEQEPKQITPKGLEIPVPKRKDLMDSFRKIVGPVKKK*
C688J35102_1208160832	3300002568	Soil	MAGKDNEPKQTTPKGLQIPVRSRGEIMDAFKKIAKPKKP*
Ga0062593_1003667793	3300004114	Soil	VTDKPQEPTQKTPKGLEIPVPTRESIFSALRKVIKPAKKP*
Ga0062595_1002350052	3300004479	Soil	MAGKKQEPTTQRTPKGLEIPVPTRGSVFKAFQKIVGKPQKGR*
Ga0066683_104633841	3300005172	Soil	VTDKPQEPTQKTPKGLEIPVPKRKDLMDAFRKIVGAPAKKP*
Ga0066675_112100442	3300005187	Soil	VTADKPREPTQRTPKGLEIPVPKRKDLMDAFRKIVGAPPKKP*
Ga0070682_1015496492	3300005337	Corn Rhizosphere	MAEKPPHGEPTQTTPKGLEIPVPKRKDLMEALRKIVHAPKKS*
Ga0070714_1001012432	3300005435	Agricultural Soil	MADKEQPAPTQRTPKGLEIPVPKRRDLMDAFRKIVHAPKKP*
Ga0070706_1010850272	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MADKPQEPKQTTPKGLEIPVPKRREIMDAFRKIIKPAKPKV*
Ga0070699_1000549093	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MADKPQEPKQKTPKGLEIPVPTRESIFAALRKIAKPVKKP*
Ga0070741_105401462	3300005529	Surface Soil	MASKDQEPTQRTPKGLEIPVPKRREVLDGLRKLMQPVKKKP*
Ga0070731_1000020689	3300005538	Surface Soil	VKRSPQPPAETQRTPKGLEIPVPKRTDVLDALRKLVQPKKG*
Ga0066701_103228902	3300005552	Soil	VAEKPEEPKQKTPKGLEIPVPKRKDLMDAFRKIVQPVKKQP*
Ga0066701_105172002	3300005552	Soil	VSDKPQEPTQKTPKGLEIPVPSRESIFAALRKIAKPAKKP*
Ga0066698_106398182	3300005558	Soil	MAGNKQEPTQRTPKGLEIPVPKRRDLMNAFRKIVGAPVKKP*
Ga0066700_100502542	3300005559	Soil	MADKPQEPKQTTPKGLEIPVPKRRDVMAALRKLVQPVKKP*
Ga0081539_100542443	3300005985	Tabebuia Heterophylla Rhizosphere	VTKQPQEPKQTTRKGLEIPVPKRRDLMADIRKLIKPAPKKP*
Ga0070717_110188631	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	QPATEPTQKTPKGLEIPVPKRRDLMDAFRKIVGAPAKKQP*
Ga0066660_103423062	3300006800	Soil	MSEKPKEPAATQRTPKGLEIPVPKRRDVLEALRKLIQPARKP*
Ga0079216_109715952	3300006918	Agricultural Soil	VSDKSQEPKQTTPKGLEIPVPKRREVIDALGTLIQPARKP*
Ga0066710_1035402472	3300009012	Grasslands Soil	MGDKPQEPKQKAPKGLETPVPKRRELMDAFRKIVGAPTKKP
Ga0066710_1037869021	3300009012	Grasslands Soil	MADKPQEPKQTTPKGLEIPVPKRKELMDAFKRIAGTVKKS
Ga0066710_1040475222	3300009012	Grasslands Soil	MSGKRQQPADTQRTPKGLEIPVPKRKEVMDAFRKIIKPTKEA
Ga0099829_101259292	3300009038	Vadose Zone Soil	VTDKPQEPTQKTPKGLEIPVPKREAIFDALRKVIKPVKKP*
Ga0099828_102318334	3300009089	Vadose Zone Soil	VTDKPQEPTQKTPKGLEIPVPKREAIFDALRKVIKPVK
Ga0099827_104959241	3300009090	Vadose Zone Soil	VTDKPQEPLQKTPKGLEIPVPKRKELMDAFRKIVGAPVKKQP*
Ga0066709_1007572963	3300009137	Grasslands Soil	MSGKRQQPADTQRTPKGLEIPVPKRKEVMDAFRKIIKPTK
Ga0066709_1029718532	3300009137	Grasslands Soil	MTDKPQEPKQTTPKGLEIPVPKRREVMDAFRKIIRTAKPKARAAS*
Ga0066709_1030617931	3300009137	Grasslands Soil	SNEPKQKTPKGLEIPVPKRRDLMDAFRKIVGPVKKPKS*
Ga0105089_10741772	3300009809	Groundwater Sand	VPDKPQEPKQKTPKGLDIPVPKRRDVMDALRKIVRPAKKP*
Ga0105072_11393291	3300009818	Groundwater Sand	KSQEPKQKTPKGLEIPVPKRKELMDAFRKIVGAPGKKQP*
Ga0105072_11428231	3300009818	Groundwater Sand	VTDKPQEPKQKTPKGLDIPVPKRKDIMDALRRVARPVKKKG*
Ga0105068_10904182	3300009836	Groundwater Sand	MSDKQPPESAGPKQTTPKGLEIPVPKHREVMDALRKLAQPVKRKS*
Ga0105058_10386072	3300009837	Groundwater Sand	VADKSQEPKQKTPKGLEIPVPKRKELMDAFRKIVGAPGKKQP*
Ga0126313_105396203	3300009840	Serpentine Soil	VTDKPQDPKQKTPKGLEIPVPKRREVMDAFRKIIRPAKKS*
Ga0126313_113520622	3300009840	Serpentine Soil	VTEQPQEPKQKTPRGLEIPVPKRKDVMDAFRKIAGKPPKKP*
Ga0126309_105621311	3300010039	Serpentine Soil	VTDKSQEPKQTTPKGLEIPVPKRRDVMDALKKLVQPAKKS*
Ga0126309_106099412	3300010039	Serpentine Soil	EPKQTTPKGLEIPVPKRKKVMDDLRKLVQPVKKS*
Ga0126309_108546362	3300010039	Serpentine Soil	MTDKPQEPKQKTPKGLEIPVPKRSEVLDAFKKIVRAPKR*
Ga0126309_111281301	3300010039	Serpentine Soil	VAGKEQESKQKTPKGLEIPVPKRSDVMEAFRKIVRPAKPKG*
Ga0126321_11116361	3300010145	Soil	SPRMSDSGQEPKQKTPKGLEIPVPKRKDVLDALRKGIQPKKK*
Ga0134125_127634451	3300010371	Terrestrial Soil	VTDKPQEPTQKTPKGLEIPVPKRSEVTDALDKIAKPKPKNEPPKGDGG*
Ga0134128_127934392	3300010373	Terrestrial Soil	MSDKPQEPKQTTPKGLEIPVPKRSEVMDFFRKVTKPKKP
Ga0138514_1001090403	3300011003	Soil	MASKSEESTQVTPKGLEIPVPKRVELMDAFKKLIQPKKS*
Ga0120163_11017022	3300012003	Permafrost	MAGKDQEPTQRTAKGLEIPVPSRESIFAAFKKIVQPVKKKP*
Ga0136620_100025288	3300012186	Polar Desert Sand	MSGKPQEQPTETQRTRKGYEIPVPKRKELMDAFRKIVAPVKKRP*
Ga0137388_105772152	3300012189	Vadose Zone Soil	MTDKPQEPTQKTPKGLEIPVPKRKELMDAFRKIVGAPVKKQP*
Ga0137365_100955402	3300012201	Vadose Zone Soil	VTDKPQDEPKQKTPKGLEIPVPKRSEIMDAFKKIVRPAKP*
Ga0137365_104618322	3300012201	Vadose Zone Soil	VTDKPQEPTQKTPKGLEIPVPKRKDLMDAFRKIVGPVKKQP*
Ga0137365_108505882	3300012201	Vadose Zone Soil	MADKPQQPKQTTPKGLEIPVPKRKELMDAFKRIVGPVKKP*
Ga0137374_100002739	3300012204	Vadose Zone Soil	MSDKPQEPKQKTPKGLEIPIPKRKDVMAALKKIAKPKA*
Ga0137374_1001104212	3300012204	Vadose Zone Soil	MAEKPQEPQQTTPKGLEIPVPKRRDLMDAFRKAIKPVKKP*
Ga0137374_101036173	3300012204	Vadose Zone Soil	VTDKPQEPKQKTPEGLEIPIPKRSEVMDAFRKIIRPVKPKG*
Ga0137374_101177333	3300012204	Vadose Zone Soil	VAHKPQEPTQKTPKGLEIPIPKRKELMDAFRKIVGAPVKKQP*
Ga0137374_101934252	3300012204	Vadose Zone Soil	VSEKSQEPKQTTPKGLEIPVPKRKELMDAFRKIIGPPVKKQP*
Ga0137374_102147844	3300012204	Vadose Zone Soil	VADKTQEPKQKTDKGLEIPVPKRKDLLDAFRKVVKPVKKP*
Ga0137374_102579442	3300012204	Vadose Zone Soil	MAGKEQEPTQRTPKGLEIPVPTRESIFAAFKKIVQPVKKKP*
Ga0137374_103244912	3300012204	Vadose Zone Soil	MVDKPKEPKQTTPKGLEIPVPKRKELMDAFRKIVRAPKKS*
Ga0137374_103719021	3300012204	Vadose Zone Soil	VTDKSQEPTQKTPKGLEIPVPKRKDLMDAFRKIVGAPAKKQP*
Ga0137374_105130242	3300012204	Vadose Zone Soil	MAGKEQEPTQKTPKGLEIPVPKRKELMDAFRKIVGAPVKKP*
Ga0137374_105472971	3300012204	Vadose Zone Soil	VIDKPQEPKQKTPKGLEIPVPKRSEVMDAFKKIVRAPKR*
Ga0137374_111157882	3300012204	Vadose Zone Soil	MSAKDQPASDQPKQTTAKGLEIPVPKRKDLMDAFRKIVGPVKKP*
Ga0137380_112837182	3300012206	Vadose Zone Soil	MSDKPQEPTQKTPKGLEIPIPSRESIFSALRKIAKPIKKP*
Ga0137381_103279992	3300012207	Vadose Zone Soil	VTDKPQEPKQKTPKGLEIPVPKRKEVMAAFRKIVGAPKKPGA*
Ga0137381_117432382	3300012207	Vadose Zone Soil	MADKPQEPKQITPKGLEIPVPKRSEVMDAFRKILRPAKPKD*
Ga0137376_112582083	3300012208	Vadose Zone Soil	PQDEPKQKTPKGLEIPGPKRKDVTAALRKLVQPAKKP*
Ga0137379_110686011	3300012209	Vadose Zone Soil	MNGKRQQPDDTQRTPKGLEIPVPKRKDIMDAFRKI
Ga0137379_112107772	3300012209	Vadose Zone Soil	MTDKPQEPKQKTPKGLEIPVPRRKDLMDAFRKIVGAPAKKP*
Ga0137377_109424861	3300012211	Vadose Zone Soil	MTGKEQEPVQDQPTQKTPKGLEIPLPKRDSIFDALRKVIKPAKKP*
Ga0137377_111340242	3300012211	Vadose Zone Soil	MSDKPQEPKQKTPKGLEIPVPKRKDVMDALRKLVQPVKKP*
Ga0137370_102630241	3300012285	Vadose Zone Soil	VTDKPQEPKQKTPKGLEIPVPKRRDLMDAFRKIIHAPRKP*
Ga0137366_102899781	3300012354	Vadose Zone Soil	TQVTPKDLEIPVPKRKDQMYAFRKIVGAPVKKRP*
Ga0137366_105035482	3300012354	Vadose Zone Soil	VTDKPQEPTQQTPKGLEILVPRRRDLMDAFRKIVRPVKKQP*
Ga0137369_106342562	3300012355	Vadose Zone Soil	VTDKPQEPKQKTPKGLEIPVPKRRDLMDAFRKIVKPPKKP*
Ga0137371_105576742	3300012356	Vadose Zone Soil	MAKEQPKQRTPKGLEIPVPKRKDVMDALRKLVQPTKKP*
Ga0137371_109980992	3300012356	Vadose Zone Soil	SDEPKQTTPKGLEIPVPKRRDLMDAFRKIVGAPPKKP*
Ga0137368_101430361	3300012358	Vadose Zone Soil	VTDKPQEPKQKTPKGLEIPVPKRRDLMDAFRKVIKPVKKP*
Ga0137368_101569602	3300012358	Vadose Zone Soil	VTDKPQEPTQKTPKGLEIPVPKRKELMDAFRKIVGAPKKP*
Ga0137368_103458692	3300012358	Vadose Zone Soil	VTDKPQEPKQKTPKGLEIPVPKRREFMYALRKIIGPANPKG*
Ga0137368_107892862	3300012358	Vadose Zone Soil	MANDDKPEPKQKTAKGLEIPVPKRKDVMAALRKLVQPVKKP*
Ga0137375_102302502	3300012360	Vadose Zone Soil	MTDKSQEPTQKTPKGLEIPVPKRKELMDAFRKIVGAPKKP*
Ga0137375_103096962	3300012360	Vadose Zone Soil	VTDKPQEPKQKTSKGLEIPVPKRRDLMDAFRKVIKPVKKP*
Ga0137375_106925712	3300012360	Vadose Zone Soil	VTDKSQEPTQKTPKGLEIPVPRRKELMDAFRKIVGAPAKKP*
Ga0137375_110833492	3300012360	Vadose Zone Soil	VTDKPQEPKQKTSKGLEIPVPKRKDVMDALKKIAKPKR*
Ga0134045_10137371	3300012409	Grasslands Soil	PQPPSSDKPKQRTPKGLEIPVPNRKDLMDSFRKIVGAPPRKKP*
Ga0134045_10137373	3300012409	Grasslands Soil	PQEPKQKTPKGLEIPVPKRRDLMDAFRKIVGPVKKQP*
Ga0150984_1226035161	3300012469	Avena Fatua Rhizosphere	PQEPKQTTPKGLEIPVPKRKDVMDALRKLVQPVKKP*
Ga0137373_107850302	3300012532	Vadose Zone Soil	MTDKPQEPTQKTPKGLEIPVPRRKELMDAFRKIVGAPVKQP*
Ga0137373_108139582	3300012532	Vadose Zone Soil	MPEEQQEPKQKTPKGLEIPVPKRRDLMDAFRKVIKPAKKP*
Ga0137373_110429281	3300012532	Vadose Zone Soil	VATKDQEPTQRTPKGLEIPAPKRRDVLDGLRKLMQPVKKKP*
Ga0136614_100761413	3300012684	Polar Desert Sand	MSDKSQEPKQTTPKGLEIPVPKRSEVMDAFNKIVRPAKPTKD*
Ga0136614_107577092	3300012684	Polar Desert Sand	VTEKPQEPTQKTPKGLEIPVPKRQDVMDALKKLVQPAKKP*
Ga0120147_10006282	3300013758	Permafrost	MTDKPQEPTQKTPKGLEIPVPTRESIFSTLRKVIKPVKKS*
Ga0120147_10351663	3300013758	Permafrost	VTEKPQEPKQTTPKGLEIPVPKRRDLMDAFRKILKPVKKG*
Ga0120179_10601242	3300013763	Permafrost	MTPKEQEPKQRTAKGLEIPVPKRRDLMDAFRKIISPVKKG*
Ga0120155_10369462	3300013768	Permafrost	MADKPQEPTQKTPKGLEIPVPKRKELMDAFRKIVGPPVKKQP*
Ga0120158_102115882	3300013772	Permafrost	MADKRQETQVTPKGLEIPVPKRRDLTDAFKKLIRPVKKP*
Ga0120149_10573793	3300014058	Permafrost	MADKPQEPTQKTPKGLEIPVPSRESIFTALRKLAKPAKKP*
Ga0120171_10554722	3300014827	Permafrost	MTGKDQKPIQRTPKGLEIPVPKRKDLMDAFRKIVGPVKKKP*
Ga0134069_12619312	3300017654	Grasslands Soil	MPDKPQEPKQKTPKGLEIPVPKRKDLMDAFRKIVGAPAKKR
Ga0134083_106065152	3300017659	Grasslands Soil	MAGKPQEPTQRTPKGLEIPLPSRESIFAALRKVAKPVKKP
Ga0136617_108448272	3300017789	Polar Desert Sand	MTKKPQEPKQTTPQGVEIPIPKRSEVMDALKKVAPPGSPKR
Ga0184608_104844961	3300018028	Groundwater Sediment	KREPTQKMSKGLEIPVPKRKDVLGALRRIARPEKKTR
Ga0184626_103163921	3300018053	Groundwater Sediment	MPKPLKVEPTQRTETGLEIPVPKRRDLMDAFRKIIQPAKKR
Ga0187765_107640201	3300018060	Tropical Peatland	MSGKPQDRPAPTQRTPKGLEIPVPKRRDLMDAFRKIVRAPTKKA
Ga0184624_104463312	3300018073	Groundwater Sediment	VIHKSQEPKQITPKGLEIPVPKRKDLMDAFRKIVGAEPKKKP
Ga0184627_101369613	3300018079	Groundwater Sediment	MTDKPQEPKQKTPKGLEIPVPKREDVLDALDKIAKPKPAKT
Ga0190265_100082057	3300018422	Soil	MSEKPQEPTQKTPKGLEIPVPKRKDVMDALRKLVQP
Ga0190265_101032864	3300018422	Soil	MTGKAQEPKQTTPKGLEIPVPKREDVLDALGKVAKPPEKPKP
Ga0066662_102732312	3300018468	Grasslands Soil	MSEKPKEPAATQRTPKGLEIPVPKRRDVLEALRKLIQPARKP
Ga0190273_101908152	3300018920	Soil	MKADPQEPKQKAPKGLEIPVPKRKDVMDALTKIAKPKR
Ga0193751_10142996	3300019888	Soil	MSGKPQEPVVTQRTPKGLEIPVPKRRDVLDALRKLVQPARKP
Ga0210362_10092242	3300021329	Estuarine	MAEKPKQTTPKGLEIPVPKRREFMNAIRWVVKPKTKPKL
Ga0209341_100704944	3300025325	Soil	MADKSQEPKQTTPKGLEIPVPKRREVMGALRKVTQPPKKPKR
Ga0209751_111122012	3300025327	Soil	MAGKSQEPKQTTPKGLEIPVPKRREVMGALRKVTQPPKKPKR
Ga0207664_100296363	3300025929	Agricultural Soil	MADKEQPAPTQRTPKGLEIPVPKRRDLMDAFRKIVHAPKKP
Ga0207711_120615233	3300025941	Switchgrass Rhizosphere	MTDKAQEPANPQRMEKGLEIPVPKRKDVLDAFRKIV
Ga0207675_1021100002	3300026118	Switchgrass Rhizosphere	VTDKPQEPKQTTPKGLEIPIPKRRDVMDALKKLVQPAKK
Ga0209058_13627662	3300026536	Soil	MAETPKQKTPKGLEIPVPKRRDLMNAFRKIVGAPVKKP
Ga0209887_10880182	3300027561	Groundwater Sand	MSDKPQEPKQKTPKGLEIPVPKRKDVMDALKKIAKPKR
Ga0209874_10345552	3300027577	Groundwater Sand	VADKSQEPKQKTPKGLEIPVPKRKELMDAFRKIVGAPGKKQP
Ga0209689_11957432	3300027748	Soil	MADKPQEPKQTTPKGLEIPVPKRRDVMAALRKLVQPVKKP
Ga0209701_104149671	3300027862	Vadose Zone Soil	VTDKPQEPTQKTPKGLEIPVPKREAIFDALRKVIKP
Ga0209579_1000004792	3300027869	Surface Soil	VKRSPQPPAETQRTPKGLEIPVPKRTDVLDALRKLVQPKKG
Ga0307285_101431132	3300028712	Soil	LGPEPKQTTPKGLEIPVPKRRDVMDALRKLVQPKKP
Ga0299914_111298821	3300031228	Soil	VTDKPQEPKQTTPKGLEIPVPKRSTVLDALRKAAQPAKPKP
Ga0308175_100000034122	3300031938	Soil	MPDEQKQKTPKGLEILVPKRKDVLDALRKLVQPARKP
Ga0315282_100976812	3300032069	Sediment	MNKPERSGEEPKQKTRKGYEIPVPKRKDLVDAFRKLVQPTKKG
Ga0335085_101563444	3300032770	Soil	MSDEQKQKSRKGLEIPVPKRGDLMDAFRKIVQPVKKKP
Ga0335076_104644693	3300032955	Soil	MAGKESPTTQRTPKGVEIPVPKRGDLMDAFRKIIRPKKRG
Ga0334722_102653902	3300033233	Sediment	MADKPQEPKQKTPKGLEIPVPKRKDLLDAFKKIVQPVKKP

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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