Metagenome / Metatranscriptome Family F052956

Basic Information
Family ID	F052956
Family Type	Metagenome / Metatranscriptome
Number of Sequences	142
Average Sequence Length	46 residues
Representative Sequence	VNDGDSLFIGLLCAGVVCVLVILADGWFLRPKRDPAATSVEEPWLP
Number of Associated Samples	124
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.14 %
% of genes near scaffold ends (potentially truncated)	96.48 %
% of genes from short scaffolds (< 2000 bps)	90.85 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Most Common Taxonomy
Group	Bacteria (80.986 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (19.014 % of family members)
Environment Ontology (ENVO)	Unclassified (24.648 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.634 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.30% β-sheet: 0.00% Coil/Unstructured: 52.70%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF06421	LepA_C	95.77
PF00717	Peptidase_S24	0.70
PF01799	Fer2_2	0.70
PF00679	EFG_C	0.70
PF05768	Glrx-like	0.70
PF02910	Succ_DH_flav_C	0.70
PF13534	Fer4_17	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG0481	Translation elongation factor EF-4, membrane-bound GTPase	Translation, ribosomal structure and biogenesis [J]	95.77
COG0695	Glutaredoxin	Posttranslational modification, protein turnover, chaperones [O]	0.70
COG3118	Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family	Posttranslational modification, protein turnover, chaperones [O]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.92 %
Unclassified	root	N/A	14.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.92 %
Unclassified	root	N/A	14.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.99 %
Unclassified	root	N/A	14.08 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	4.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.34 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	2.82 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.11 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	2.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.08 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5.63 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	2.82 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	2.11 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.08 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	2.82 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	2.11 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	1.41 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.08 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	2.82 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	2.11 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	1.41 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.08 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	2.82 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	2.11 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1.41 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	0.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.08 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	2.82 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	2.11 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.41 %
Paenibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	0.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.08 %
Nematoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda	2.82 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	2.11 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.41 %
unclassified Paenibacillus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → unclassified Paenibacillus	0.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.08 %
Chromadorea	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea	2.82 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	2.11 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.41 %
Paenibacillus sp. P22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → unclassified Paenibacillus → Paenibacillus sp. P22	0.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.08 %
Rhabditida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida	2.82 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	2.11 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.41 %
Paenibacillus sp. P22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → unclassified Paenibacillus → Paenibacillus sp. P22	0.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.08 %
Tylenchina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina	2.82 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	2.11 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.41 %
Paenibacillus sp. P22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → unclassified Paenibacillus → Paenibacillus sp. P22	0.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.08 %
Panagrolaimomorpha	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha	2.82 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	2.11 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.41 %
Paenibacillus sp. P22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → unclassified Paenibacillus → Paenibacillus sp. P22	0.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.08 %
Strongyloidoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea	2.82 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	2.11 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.41 %
Paenibacillus sp. P22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → unclassified Paenibacillus → Paenibacillus sp. P22	0.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.08 %
Strongyloididae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae	2.82 %
asterids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids	2.11 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.41 %
Paenibacillus sp. P22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → unclassified Paenibacillus → Paenibacillus sp. P22	0.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.08 %
Parastrongyloides	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides	2.82 %
campanulids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids	2.11 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.41 %
Paenibacillus sp. P22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → unclassified Paenibacillus → Paenibacillus sp. P22	0.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.08 %
Parastrongyloides trichosuri	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	2.82 %
Asterales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales	2.11 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.41 %
Paenibacillus sp. P22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → unclassified Paenibacillus → Paenibacillus sp. P22	0.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.08 %
Parastrongyloides trichosuri	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	2.82 %
Asteraceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae	2.11 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.41 %
Paenibacillus sp. P22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → unclassified Paenibacillus → Paenibacillus sp. P22	0.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.08 %
Parastrongyloides trichosuri	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	2.82 %
Asteroideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae	2.11 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.41 %
Paenibacillus sp. P22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → unclassified Paenibacillus → Paenibacillus sp. P22	0.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.08 %
Parastrongyloides trichosuri	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	2.82 %
Anthemideae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae	2.11 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.41 %
Paenibacillus sp. P22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → unclassified Paenibacillus → Paenibacillus sp. P22	0.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.08 %
Parastrongyloides trichosuri	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	2.82 %
Anthemidinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae	2.11 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.41 %
Paenibacillus sp. P22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → unclassified Paenibacillus → Paenibacillus sp. P22	0.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.08 %
Parastrongyloides trichosuri	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	2.82 %
Tanacetum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum	2.11 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.41 %
Paenibacillus sp. P22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → unclassified Paenibacillus → Paenibacillus sp. P22	0.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.08 %
Parastrongyloides trichosuri	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	2.82 %
Tanacetum cinerariifolium	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	2.11 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.41 %
Paenibacillus sp. P22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → unclassified Paenibacillus → Paenibacillus sp. P22	0.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000546\|LJNas_1025159	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300000567\|JGI12270J11330_10154333	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300001396\|JGI20175J14863_1031392	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300001471\|JGI12712J15308_10181910	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300001593\|JGI12635J15846_10090053	Not Available	2222	Open in IMG/M
3300002245\|JGIcombinedJ26739_100239346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1705	Open in IMG/M
3300002245\|JGIcombinedJ26739_100277944	Not Available	1560	Open in IMG/M
3300002245\|JGIcombinedJ26739_100353157	Not Available	1351	Open in IMG/M
3300003368\|JGI26340J50214_10030826	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	1590	Open in IMG/M
3300003861\|Ga0031654_10005627	All Organisms → cellular organisms → Bacteria → Proteobacteria	3726	Open in IMG/M
3300004091\|Ga0062387_100279214	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300004104\|Ga0058891_1569243	Not Available	1383	Open in IMG/M
3300004152\|Ga0062386_101176587	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300005538\|Ga0070731_11019115	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300009500\|Ga0116229_10760086	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300009500\|Ga0116229_10789676	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300009500\|Ga0116229_11451853	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300009500\|Ga0116229_11589134	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300009633\|Ga0116129_1159557	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300009709\|Ga0116227_11155201	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300010159\|Ga0099796_10337066	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300010343\|Ga0074044_10319674	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300010876\|Ga0126361_11287796	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300011120\|Ga0150983_10592416	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300011270\|Ga0137391_11573816	Not Available	501	Open in IMG/M
3300012205\|Ga0137362_10563655	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300012362\|Ga0137361_11606163	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	571	Open in IMG/M
3300012683\|Ga0137398_10053839	Not Available	2394	Open in IMG/M
3300012917\|Ga0137395_10477022	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300012925\|Ga0137419_10649371	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300012927\|Ga0137416_11273417	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300012927\|Ga0137416_11401054	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300014155\|Ga0181524_10492842	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300014156\|Ga0181518_10015974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5397	Open in IMG/M
3300014501\|Ga0182024_11604017	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300014501\|Ga0182024_12432501	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300015241\|Ga0137418_10747822	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300015242\|Ga0137412_11197588	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300015245\|Ga0137409_10658648	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300016730\|Ga0181515_1266200	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300017823\|Ga0187818_10487324	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300018038\|Ga0187855_10942954	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300019787\|Ga0182031_1541956	All Organisms → cellular organisms → Bacteria	1412	Open in IMG/M
3300019880\|Ga0193712_1124030	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300020027\|Ga0193752_1085218	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	1313	Open in IMG/M
3300020034\|Ga0193753_10182987	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300020062\|Ga0193724_1048602	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300020580\|Ga0210403_10632345	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300021168\|Ga0210406_11043979	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300021180\|Ga0210396_10519233	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300021181\|Ga0210388_10634123	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300021401\|Ga0210393_10290331	Not Available	1328	Open in IMG/M
3300021403\|Ga0210397_10450956	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300021432\|Ga0210384_10328096	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	1378	Open in IMG/M
3300021432\|Ga0210384_11507495	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300021433\|Ga0210391_10757498	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300021474\|Ga0210390_10214486	Not Available	1629	Open in IMG/M
3300021477\|Ga0210398_11556394	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300021478\|Ga0210402_10468431	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300021478\|Ga0210402_11163011	Not Available	699	Open in IMG/M
3300021478\|Ga0210402_11705548	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300021479\|Ga0210410_10955347	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300021559\|Ga0210409_10676964	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	902	Open in IMG/M
3300022522\|Ga0242659_1038082	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	812	Open in IMG/M
3300022522\|Ga0242659_1064049	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300022525\|Ga0242656_1132198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	514	Open in IMG/M
3300022530\|Ga0242658_1214131	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300023259\|Ga0224551_1076920	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300025916\|Ga0207663_10358020	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300026514\|Ga0257168_1138603	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300027119\|Ga0209522_1019345	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300027432\|Ga0209421_1100496	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300027496\|Ga0208987_1088425	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300027562\|Ga0209735_1030100	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300027567\|Ga0209115_1073679	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300027574\|Ga0208982_1040325	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300027605\|Ga0209329_1057221	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300027616\|Ga0209106_1148156	Not Available	523	Open in IMG/M
3300027698\|Ga0209446_1208702	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300027727\|Ga0209328_10227418	All Organisms → cellular organisms → Bacteria → Terrabacteria group	560	Open in IMG/M
3300027737\|Ga0209038_10166416	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300027807\|Ga0209208_10059110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3134	Open in IMG/M
3300027860\|Ga0209611_10804573	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300027867\|Ga0209167_10462408	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300027895\|Ga0209624_10373960	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300027908\|Ga0209006_10359038	Not Available	1233	Open in IMG/M
3300028572\|Ga0302152_10045460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1369	Open in IMG/M
3300028747\|Ga0302219_10105696	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300028773\|Ga0302234_10337481	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300028775\|Ga0302231_10282705	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300028779\|Ga0302266_10324537	Not Available	559	Open in IMG/M
3300028785\|Ga0302201_10376466	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300028789\|Ga0302232_10169945	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300028789\|Ga0302232_10292313	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300028800\|Ga0265338_10831066	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300028866\|Ga0302278_10360690	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300028871\|Ga0302230_10292422	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300028879\|Ga0302229_10445534	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300028882\|Ga0302154_10044684	Not Available	2564	Open in IMG/M
3300028906\|Ga0308309_10276918	Not Available	1412	Open in IMG/M
3300029882\|Ga0311368_10120329	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	2201	Open in IMG/M
3300029911\|Ga0311361_10012539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	16519	Open in IMG/M
3300029922\|Ga0311363_11404210	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300029943\|Ga0311340_11458992	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300029943\|Ga0311340_11564890	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300029945\|Ga0311330_10590848	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300029945\|Ga0311330_10877062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → unclassified Paenibacillus → Paenibacillus sp. P22	673	Open in IMG/M
3300029951\|Ga0311371_11821303	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300029953\|Ga0311343_11439158	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300029955\|Ga0311342_10944434	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300030020\|Ga0311344_11310791	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300030043\|Ga0302306_10236810	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300030051\|Ga0302195_10493412	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300030056\|Ga0302181_10512392	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300030503\|Ga0311370_10574271	Not Available	1359	Open in IMG/M
3300030520\|Ga0311372_12625973	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300030520\|Ga0311372_12667224	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300030524\|Ga0311357_10464559	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300030524\|Ga0311357_11682686	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300030617\|Ga0311356_10596065	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300030618\|Ga0311354_11236965	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300030693\|Ga0302313_10296755	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300030739\|Ga0302311_10656272	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300030991\|Ga0073994_11683305	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300031057\|Ga0170834_108651402	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300031236\|Ga0302324_100015543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	15266	Open in IMG/M
3300031236\|Ga0302324_100797749	Not Available	1315	Open in IMG/M
3300031236\|Ga0302324_101202165	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300031249\|Ga0265339_10605739	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300031525\|Ga0302326_13239683	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300031715\|Ga0307476_10003376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	9514	Open in IMG/M
3300031726\|Ga0302321_103492016	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300031823\|Ga0307478_10131292	Not Available	1973	Open in IMG/M
3300031954\|Ga0306926_11110137	Not Available	935	Open in IMG/M
3300031962\|Ga0307479_11113530	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300032160\|Ga0311301_10279274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2706	Open in IMG/M
3300032955\|Ga0335076_11241875	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300033826\|Ga0334847_027397	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300034130\|Ga0370494_148396	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300034163\|Ga0370515_0129979	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.96%
Host-Associated	Host-Associated	7.04%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.80%
Aquatic	Environmental → Aquatic	9.15%
Plants	Host-Associated → Plants	7.04%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.52%
Peat	Environmental → Terrestrial → Peat	30.28%
Freshwater	Environmental → Aquatic → Freshwater	9.15%
Peat Moss	Host-Associated → Plants → Peat Moss	4.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.41%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.51%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	30.28%
Loam	Environmental → Terrestrial → Soil → Loam	14.08%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.45%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.93%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	4.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.41%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	30.28%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.01%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.38%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.04%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	4.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.82%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.41%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.70%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.70%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.70%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	19.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.49%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	12.68%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.45%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	8.45%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	4.93%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.11%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.41%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.41%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.41%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.41%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.41%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.41%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.41%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.41%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.70%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.70%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.70%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.70%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.70%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.70%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.70%
Quercus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere	0.70%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.70%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000546	Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled	Host-Associated	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001396	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300003861	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019880	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1	Environmental	Open in IMG/M
3300020027	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023259	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 20-24	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300027119	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027496	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027574	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027807	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG (SPAdes)	Host-Associated	Open in IMG/M
3300027860	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)	Host-Associated	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028572	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_1	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028785	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_2	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300028871	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_1	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030693	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033826	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E2 1-5	Environmental	Open in IMG/M
3300034130	Peat soil microbial communities from wetlands in Alaska, United States - Collapse_03_16	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052956

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LJNas_10251592	3300000546	Quercus Rhizosphere	VNDGDGIFIGLLSAGAVCVLVILIDGWFFRPRRDPGASSAEEPMLPKL
JGI12270J11330_101543331	3300000567	Peatlands Soil	VSDGDTLFFVLLCASVACVVVILIDGWFLRPQRDPGATSVEEPWLPKMAG
JGI20175J14863_10313921	3300001396	Arctic Peat Soil	VTDGDSLFVGLLCASLACVLVIVIDGWFLRPQRDPGATGENEPLLPRLAGYA
JGI12712J15308_101819101	3300001471	Forest Soil	VNDGDRIFVGLLFAGAICVLVILIDGWFLRPKRDPGASS
JGI12635J15846_100900531	3300001593	Forest Soil	VNDGDRIFVGLLCAGVICVLVILIDGWFLRPKRDPGA
JGIcombinedJ26739_1002393462	3300002245	Forest Soil	VNDGDSVFMGLLCAGIACVLVILADGWFFRPKRDPGATSVEEPWPPK*
JGIcombinedJ26739_1002779442	3300002245	Forest Soil	VSDGDTVFIVLLCASLACVLVILVDGWVLRPQRDPSAASMEEPW
JGIcombinedJ26739_1003531572	3300002245	Forest Soil	MNDGDSLFVGLLCAAVVCVLVILVDGWFVRPKRDPGATSVAEP
JGI26340J50214_100308261	3300003368	Bog Forest Soil	VNDGDSLFLGLLCAGIACVLVILVDGWFVRPRRDPGATSVEEPWLPKIA
Ga0031654_100056271	3300003861	Freshwater Lake Sediment	VTDGDSLFIGLLCASLACVLVIVIDGWFLRPKRDPGATGENEPLLARLASY
Ga0062387_1002792141	3300004091	Bog Forest Soil	VNDGDSLFVALLCGGIACVLVILIDGWFLRPRRDPGASSAQEPV
Ga0062389_1017536042	3300004092	Bog Forest Soil	MILLCAAIVCVLVILIDGWFLRPQRDPGATSVDEPLLPRL
Ga0058891_15692432	3300004104	Forest Soil	VNDGDRIFLGLLFAGAACVLVILIDGWFLRPRRDPGATSAEEPLL
Ga0062386_1011765872	3300004152	Bog Forest Soil	VNDGDSLFFGLLCAAIACVLVILVDAWILRPKRDPAATSAEE
Ga0070731_110191151	3300005538	Surface Soil	VNDGDRIFVGLLCAAAVCVLVILIDGWFLRPRRDPGATSAEEPLLPKL
Ga0116229_107600862	3300009500	Host-Associated	VTDVDNLFFELLCVCLACVLVILFDGWFMRPVRDPGATSTEEPLVP
Ga0116229_107896761	3300009500	Host-Associated	VNDGDSLFIILLGAAIACVLVILVDAWILRPRRDPSAT
Ga0116229_114518531	3300009500	Host-Associated	LEFCVNDGDSLFLILLCAAGVCVLVILIDAWILRPRRDPAGTSVEEPWLAKGAGYALVGV
Ga0116229_115891341	3300009500	Host-Associated	VTDGDTLFFVLLCASLACILVILIDGWFMRPRRDPSATSTEEPLLPKLAGFVLVALALVM
Ga0116129_11595571	3300009633	Peatland	VNDGDSLFLGLLCAAIACVLVILVDGWFLRPQRDPGATGAHEP
Ga0116227_111552011	3300009709	Host-Associated	VNDGDSLFVVLLCAAIVCVLVILVDGWFLRPQRDPGATQVSEP
Ga0099796_103370661	3300010159	Vadose Zone Soil	MNDGDSLFIVLLCAAVVCVLVILVDGWIFRPKRDPGATSVEEPWLPKIA
Ga0074044_103196741	3300010343	Bog Forest Soil	VNDGDRVFLGLLLAGAVCVLVILIDGWFLRPRRDPGATSIE
Ga0126361_112877962	3300010876	Boreal Forest Soil	VNDGDRIFVGLLFAAAVCVLVILIDGWFLRPRRDPGATSVEE
Ga0150983_105924161	3300011120	Forest Soil	VNDGDRIFLGLLFAGAACVLVILIDGWFLRPRRDPGATSAEEPLLP
Ga0137391_115738161	3300011270	Vadose Zone Soil	MNDGDSLFIGLLCAGVVCVLVILVDGWFFRPQRDPGATSVEEPWLPKMAGYALVGLSL
Ga0137362_105636551	3300012205	Vadose Zone Soil	VNDGDGIFIGLLCAGALCVLVILIDGWFFRPRRDPGASSAEEPMLPKLAGYALV
Ga0137361_116061631	3300012362	Vadose Zone Soil	MNDGDSLFVGLLCAGVACVLVILIDGWFFRPKRDPGATS
Ga0137398_100538391	3300012683	Vadose Zone Soil	MNDGDSLFIVLLCAAVVCVLVILVDGWIFRPKRDPGATSVEE
Ga0137395_104770221	3300012917	Vadose Zone Soil	MFIVLLCASLACVLVILIDGWVLRPRREPSATSIEE
Ga0137419_106493711	3300012925	Vadose Zone Soil	MNDGDSLFIVLLCAAVVCVLVILVDGWIFRPKRDPGATSVEEPW
Ga0137416_112734171	3300012927	Vadose Zone Soil	VSDGDTVFIVLLCASLACVLVILIDGWVLRPQRDPSATSIEEPWLPKAAGY
Ga0137416_114010541	3300012927	Vadose Zone Soil	VNDGDSLFIGLLCAGVVCVLVILVDGWFFRPQRDPGATSVEEPWLPKMAGY
Ga0181524_104928421	3300014155	Bog	VSDGDSLFVVLLCAAIACVLVILIDGWFVRPQRDPGATSATEPL
Ga0181518_100159741	3300014156	Bog	LLVNNGDSLFIGLLCAAVVCVLVVLVDAWVLRPKRDPSATSVDEPWLARMAGYGLVALSLAL
Ga0182024_116040171	3300014501	Permafrost	VNDGDSLFIGLLCAGVVCVLVILADGWFLRPKRDPAATSVEEPWLPRIAGYALVVLSLA
Ga0182024_124325011	3300014501	Permafrost	VNDGDSLFLGLLCAAIACVLVILVDGWFLRPQRDPGATGAHEPLIPRLAGYALVALAI
Ga0137418_107478222	3300015241	Vadose Zone Soil	MNDGDSVFIGLLCAAVACVLVILVDGWFLRPKRDPGATSVEEP
Ga0137412_111975881	3300015242	Vadose Zone Soil	VNDGDGIFIGLLCAGALCVLVILIDGWFFRPRRDPGASSAEEPML
Ga0137409_106586481	3300015245	Vadose Zone Soil	VSDGDTVFIVLLCASLACVLVILIDGWVLRPQRDPGATSIEE
Ga0181515_12662001	3300016730	Peatland	VNNGDSLFIGLLCAAVVCVLVVLVDAWVLRPKRDPSATSVDEPWLARMAGYGL
Ga0187818_104873242	3300017823	Freshwater Sediment	VSDGDSLFIGLLCAAIACVLVILIDGWFLRPQRDPAATSVGEPVLPRLAGYAL
Ga0187855_109429542	3300018038	Peatland	VNDGDSLFVALLCGGVVCVLVILIDGWFVRPHRDPGASSSVEPLVPRLAGYALVALAL
Ga0182031_15419561	3300019787	Bog	VSDGDNLFLGLLCAAVACVLVIVVDGWFLRPKRDP
Ga0193712_11240301	3300019880	Soil	VNDGDRIFIGLLCAGAVCVLVILIDGWFFRPRRDPGASGVEE
Ga0193752_10852181	3300020027	Soil	VTDGDRIFFALLCAAAVCVLVILIDGWFLRPRRDPGATSAEEP
Ga0193753_101829871	3300020034	Soil	VNDGDGIFIGLLCAGAVCVLVILIDGWFFRPKRDPGASSA
Ga0193724_10486021	3300020062	Soil	VSDGDTMFIVFLCASLVCVLVILIDGWVLRPQRDPGATSIEEPWLPKAAGYALVVLAVG
Ga0210403_106323451	3300020580	Soil	VNDGDNLFMGLLCAGIACVVVILADGWIFRPKRDPGATSTAEPWLPK
Ga0210406_110439792	3300021168	Soil	MNDGDSLFIVLLCAAVVCVLVILIDGWIFRPKRDP
Ga0210396_105192332	3300021180	Soil	VNDGDSLFMGLLCAGVVCVLVILVDGWFLRPKRDPGAMS
Ga0210388_106341231	3300021181	Soil	VNDGDRFFVGLLIAGVVCVLVILIDGWFLRPRRDPGATSAEEPLLPKLAGY
Ga0210393_102903311	3300021401	Soil	MSDGDSLFIGLLCAAVVCVLVILADGWFSRPKRDPGAMSVAEPWLPKAAGYALVGL
Ga0210397_104509561	3300021403	Soil	VTDGDHIFFALLCAAAVCVLVILIDGWFLRLRRDPGATSAEEPL
Ga0210384_103280961	3300021432	Soil	MNDGDSLFIGLLCAGVVCVLVILIDGWIFRPKRDPGATSVEEPWLPKMAGYALVVLSLAM
Ga0210384_115074951	3300021432	Soil	VSDGDTMFIVLLCASLACVLVILVDGWVLRPRRDPGATSI
Ga0210391_107574981	3300021433	Soil	VNDGDSLFVALLCAAIVCVLVILVDGWFLRPQRDPGATS
Ga0210390_102144861	3300021474	Soil	VNDGDSLFIGLLCAAIACVLVILVDGWFLRPQRDPGATGAHE
Ga0210398_115563942	3300021477	Soil	VNDGDSVFMGLLCAGIVCVLVILVDGWFFRPKRDPGATSVEEPWPPKIAGYVLVV
Ga0210402_104684311	3300021478	Soil	MNDGDSLFIGLLCAGVVCVLIILIDGWIFRPKRDPGATSVEEPWLPKMAGYAL
Ga0210402_111630112	3300021478	Soil	VTDGDRIFFALLCAAAVCVLVILIDGWFLRPRRDP
Ga0210402_117055481	3300021478	Soil	VNDGDRIFLGLLCAGAVCVLVILIDGWFLRPRRDPG
Ga0210410_109553471	3300021479	Soil	VNDGDNLFMALLGAGVVCVLVILADGWIFRPKRDPGATSAAEPLLPKMAGYAL
Ga0210409_106769642	3300021559	Soil	MNDGDSLFIGLLCAGVVCVLVILIDGWIFRPKRDP
Ga0242659_10380821	3300022522	Soil	MNDGDSLFVGLLCAGVACVLVILLDGWFIRPKRDPAATSVEEPLLPKM
Ga0242659_10640491	3300022522	Soil	VNDGDSLFIGLLCAAIACVLVILVDGWFLRPQRDPGATGAHEPL
Ga0242656_11321981	3300022525	Soil	MNDGDSLFIGLLCAGVVCVLVILIDGWIFRPKRDPGATSVEEPWLPKM
Ga0242658_12141311	3300022530	Soil	VNDGDRIFLGLLCAGAVCVLVILIDGWFLRPRRDPGATSAEEPLLPKLAG
Ga0224551_10769202	3300023259	Soil	VNDGDRIFLGLLLAGAVCVLVILIDGWFLRPRRDPGATSVEEPLLPKLAGYD
Ga0207663_103580201	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MVLLCAGIVCVLVILADGWFYRPKRDPGATSVAEPTLPKMAGYAL
Ga0257168_11386032	3300026514	Soil	MNDGDSLFIGLLCAGVVCVLIILIDGWIFRPKRDPGATSVEEPWLPKMAGYALV
Ga0209522_10193451	3300027119	Forest Soil	VTDGDRIFLGLLLAGAACVLVILIDGWFLRPRRDPGATSVEEPMLPKLAGYALVGLSLAM
Ga0209421_11004961	3300027432	Forest Soil	VTDGDSLFIVLLCASLACVLVIVIDGWFLRPQRDPGATGENEPLLPR
Ga0208987_10884252	3300027496	Forest Soil	MNDGDSLFIVLLCAAVVCVLVILIDGWIFRPKRDPGATSVEEPWLPKIAGYAL
Ga0209735_10301002	3300027562	Forest Soil	VSDGDSLFIGLLCAGVVCVLLILADGWFARPKRDPGATSVEEPWLPKMAGYALVGLSLAM
Ga0209115_10736791	3300027567	Forest Soil	VNDGDSLFIGLLCAAIACVLVILVDGWFLRPQRDPG
Ga0208982_10403251	3300027574	Forest Soil	VNDGDRIFVGLLCAGAACVLVILIDGWFLRPRRDPGAASADEPMLPKLAGYALVGLSLAM
Ga0209329_10572211	3300027605	Forest Soil	VSDGDSLFIGLLCAGVVCVLLILADGWFARPKRDPGATSVEEPWLPKMAGYALV
Ga0209106_11481562	3300027616	Forest Soil	MNDGDSVFIGLLCAAVACVLVILVDGWFLRPKRDPGATSVEEPWLPKM
Ga0209446_12087021	3300027698	Bog Forest Soil	VNDGDRLFLGLLFAGAACVLVILIDGWFLRPQRDPG
Ga0209328_102274181	3300027727	Forest Soil	VSDGDTMFIVLLCASLACVLVILIDGWVLRPQRDPSATSIEEPWLP
Ga0209038_101664162	3300027737	Bog Forest Soil	VNDGDSLFIGLLCAGGACVLVILIDGWFLRPRRDPGATSAQEALLPKLAGW
Ga0209208_100591104	3300027807	Host-Associated	VTNGDSLFIVLLCLSLACVLVILVDGWFVRPRRDPGATSD
Ga0209611_108045731	3300027860	Host-Associated	VNEGDSLGDGVFLTLLYAAIGCLLVILVDAWILRPKR
Ga0209167_104624082	3300027867	Surface Soil	VNDGDNLFMGLLCAGIACVLVILVDGWVFRPKRDPGATSMVEPTLPKM
Ga0209624_103739602	3300027895	Forest Soil	VNDGDNLFMGLLCAGIVCVLVILVDGWIFRPKRDPGATSTA
Ga0209006_103590381	3300027908	Forest Soil	VNDGDNLFIGLLCAGVVCVLVILIDGWFLRPKRDPGASSVEEPWLPKMAGYAL
Ga0302152_100454603	3300028572	Bog	VNDGDSLFIVLLCAALVCVIVILIDAWALRPRRDPGATSLEEPALP
Ga0302219_101056961	3300028747	Palsa	VNDGDRIFLGLLFAGAVCVLVILIDGWFLRPRRDPGATSVE
Ga0302234_103374811	3300028773	Palsa	VSDGDTLFIVLLCASLACIFVILVDGWFVRPKRDPSATSTEEPMLPKVAGFVLVGLALVMLW
Ga0302231_102827051	3300028775	Palsa	VNDGDSLFVALLCAAIVCVLVILIDGWFLRPLRDPGASSSTEPVLPRLAG
Ga0302266_103245372	3300028779	Bog	VNDGDSLFIGLLCAAFACVLIILIDAWWLRPRRDPGATSTDEPWLPKSA
Ga0302201_103764662	3300028785	Bog	VNDGDSLFIGLLCAAFACVLIILIDAWWLRPRRDPGATSTDEPWLPKSAGYALIALS
Ga0302232_101699451	3300028789	Palsa	VNDGDSLFVALLCGGIACVLVILIDGWFLRPRRDPGASSVQEPL
Ga0302232_102923132	3300028789	Palsa	VNDGDRIFLGLLFAGAVCVLVILIDGWFLRPRRDPGA
Ga0265338_108310662	3300028800	Rhizosphere	VSVGDSLFMTLIYASIACLLVIVADGWFFRPKRDPAATSSDEPL
Ga0302226_102407912	3300028801	Palsa	MGLLCAGIACVLVILVDGWFFRPKRDPGATSVEEPWPP
Ga0302278_103606901	3300028866	Bog	VSDGDNLFLGLLCAAVACVLVIVVDGWFLRPKRDPGATSV
Ga0302230_102924222	3300028871	Palsa	VSDGDNLFIGLLCAGVVCVLVILVDGWFFRPQRDPGA
Ga0302229_104455341	3300028879	Palsa	VNDGDRIFLGLLFAGAVCVLVILIDGWFLRPRRDPGATSVEEPLLPKLAGYALV
Ga0302154_100446844	3300028882	Bog	VNDGDSLFIVLLCAALVCVIVILIDAWALRPRRDPGATSLEEP
Ga0308309_102769182	3300028906	Soil	LGGFFVNDGDSLFVVLLCAAIACVLVILIDGWFLRPRRDPGASSA
Ga0311368_101203291	3300029882	Palsa	VNDGDSVFMGLLCAGIACVLVILVDGWFFRPKRDPGATSVEEPWPPKMAGYVLV
Ga0311361_1001253919	3300029911	Bog	VSDGDTLFIFFLCAGLACVLVILIDGWFLRPQRDPG
Ga0311363_114042101	3300029922	Fen	VNDGDSLFMGLLYAAIVCVLVILIDGWFLRPQRDPGATGVDEP
Ga0311340_114589922	3300029943	Palsa	VNDGDSLFIGLLCAGVVCVLVILADGWFLRPKRDPAATSVEEPWLP
Ga0311340_115648902	3300029943	Palsa	VNDGDSLFVALLCAAIVCVLVILIDGWFLRPLRDPGASSST
Ga0311330_105908481	3300029945	Bog	VSDGDTLFIVLLCASLACILVILVDGWFVRPRRDPSATSTEEPMLPKLA
Ga0311330_108770621	3300029945	Bog	VNDGDSLFVVLLCAAIVCVLVILIDGWFLRPQRDPGATSVTEPLLP
Ga0311371_118213032	3300029951	Palsa	VNDGDSLFVAMLCASVVCVLIILVDGWYLRPRRDPGATSVEEPGLPKLAGYALVVLAL
Ga0311343_114391581	3300029953	Bog	VSDGDSLFLVLLCASLACVLVILIDGWFIRPRRDPSAAGTLEPWLPKLAGYVLVA
Ga0311342_109444342	3300029955	Bog	VNDGDSLFMGLLYAAIVCVLVILIDGWFLRPQRDPGATGVDEPI
Ga0311344_113107911	3300030020	Bog	VNDGDSLFMGMLCAGVVCVLLILADGWFFRPRRDP
Ga0302306_102368101	3300030043	Palsa	VNDGDSLFVILLCAGIACVLVILIDGWFLRPRRDPGASSSQEPFVPRIAGYV
Ga0302195_104934122	3300030051	Bog	VNDGDSLFIGLLCAAFACVLIILIDAWWLRPRRDPG
Ga0302181_105123922	3300030056	Palsa	VNDGDSLFVALLCGGIACVLVILIDGWFLRPRRDPGASSV
Ga0311370_105742712	3300030503	Palsa	VNDGDSLFVALLCAAIVCVLVILIDGWFLRPRRDPGASSSTEPLLPRLAGYALVALAL
Ga0311372_126259732	3300030520	Palsa	VNDGDNLFVGLLCAGFVCVLVILADGWFFRPRRDPGA
Ga0311372_126672241	3300030520	Palsa	VNDGDRLFVALLCAGAACVLVILVDGWFLRPRRDPGATSADEPLLPKLAGYALVG
Ga0311357_104645592	3300030524	Palsa	VNDGDSLFVILLCAGIACVLVILIDGWFLRPRRDPGASSSQEPFVPRIAG
Ga0311357_116826861	3300030524	Palsa	VSDGDSLFVGLLCASLACVLVILVDGWYFRPRRDPKATAVHEPPLPRIAGYALI
Ga0311356_105960652	3300030617	Palsa	VNDGDRIFLGLLFAGAVCVLVILIDGWFLRPRRDPGATSVEEPLLPKLAGY
Ga0311354_112369652	3300030618	Palsa	VNDGDRLFIVLLCAAAVCVLVILIDGWFLRPHRDPGATNAEEPLAPKLAG
Ga0302313_102967551	3300030693	Palsa	VNDGDRIFLGLLFAGAVCVLVILIDGWFLRPRRDPG
Ga0302311_106562721	3300030739	Palsa	VNDRDSLFVALLCGGVACVLVILVDGWFLRPRRDPGASSSEEPLIPRLAG
Ga0073994_116833051	3300030991	Soil	VSDGDLLFICLLCASLACVVVILVDGWFVRPRRDPGATSVEEPWLPK
Ga0170834_1086514021	3300031057	Forest Soil	MNDGDSLFIGLLCAGGVCVLIILIDGCIFRPKRDPGATSVEEPWLPK
Ga0302324_10001554318	3300031236	Palsa	VNDGDRLFIVLLCAAAVCVLVILIDGWFLRPHRDPGATNAEEPLAPKLAGYALVAL
Ga0302324_1007977492	3300031236	Palsa	VNDGDNLFVGLLCAGFVCVLVILADGWFFRPRRDPGAASTEEPWLPKMAGYA
Ga0302324_1012021651	3300031236	Palsa	VNDGDSLFVGLLCAGVACVLVILVDGWFLRPRRDPGASSAHEP
Ga0265339_106057392	3300031249	Rhizosphere	VSDGDSLFLGLIGAAIACVLVIVADGWFFRPKRDPAATSTEEPLLPRMAAY
Ga0302326_132396831	3300031525	Palsa	VNDGDNLFIGLLCAGVVCVLVILLDGWYYRPKRDPGATSVEE
Ga0307476_100033761	3300031715	Hardwood Forest Soil	VNDGDRIFLGLLIAGAVCVLVILIDGWFLRPRRDP
Ga0302321_1034920162	3300031726	Fen	VSDDDTLFIVILCASLACVLVILVDGWVLRPRRDPGATSIEEPWLPKAAG
Ga0307478_101312922	3300031823	Hardwood Forest Soil	MNDGDSLFTGLLCAGVVCVVVILIDGWIFRPKRDP
Ga0306926_111101371	3300031954	Soil	VNDGDRLFMAFLCAGAVCVLVILIDGWFLRPRRDPG
Ga0307479_111135301	3300031962	Hardwood Forest Soil	VNDGDRIFIGLLCASAVCVLVILIDGWVLRPRRDPGASSADEPMLPKLAGYA
Ga0311301_102792744	3300032160	Peatlands Soil	VNNGDSLFIGLLCAAVACVLVVLVDAWVLRPKRDPSATSVDEPWLARMAGYGLVALSL
Ga0335076_112418751	3300032955	Soil	VSDGDSLFIVLLCAAIVCVLVILIDGWFVRPLRDPGATGVDEP
Ga0334847_027397_524_631	3300033826	Soil	MNDGDNLFIGLLCAAVACVLVILVDGWFVRPKRDPG
Ga0370494_148396_1_141	3300034130	Untreated Peat Soil	VNDGDSLFVILLGAAVACVLVILVDAWVMRPRRDPAATSIEEPWLPK
Ga0370515_0129979_929_1081	3300034163	Untreated Peat Soil	MGLLCAGIVCVLVILADGWFFRLKRDPGATSVEEPWPPKLAGYALVGLSLA

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign