Metagenome Family F052916

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052916
Family Type	Metagenome
Number of Sequences	142
Average Sequence Length	49 residues
Representative Sequence	MSGAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGRLAVLEVEIP
Number of Associated Samples	121
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.23 %
% of genes near scaffold ends (potentially truncated)	96.48 %
% of genes from short scaffolds (< 2000 bps)	92.25 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (74.648 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.873 % of family members)
Environment Ontology (ENVO)	Unclassified (24.648 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.437 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 27.03% Coil/Unstructured: 72.97%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF14534	DUF4440	31.69
PF13474	SnoaL_3	6.34
PF02585	PIG-L	3.52
PF00072	Response_reg	2.11
PF13561	adh_short_C2	2.11
PF13424	TPR_12	2.11
PF00144	Beta-lactamase	1.41
PF02899	Phage_int_SAM_1	1.41
PF00155	Aminotran_1_2	1.41
PF00196	GerE	1.41
PF00106	adh_short	1.41
PF00326	Peptidase_S9	0.70
PF12867	DinB_2	0.70
PF14525	AraC_binding_2	0.70
PF07690	MFS_1	0.70
PF12697	Abhydrolase_6	0.70
PF11706	zf-CGNR	0.70
PF01872	RibD_C	0.70
PF14329	DUF4386	0.70
PF02371	Transposase_20	0.70
PF03454	MoeA_C	0.70
PF00440	TetR_N	0.70
PF01042	Ribonuc_L-PSP	0.70
PF05598	DUF772	0.70
PF12695	Abhydrolase_5	0.70
PF01557	FAA_hydrolase	0.70
PF13191	AAA_16	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	3.52
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.41
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.41
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.41
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	1.41
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	1.41
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.70
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.70
COG0303	Molybdopterin Mo-transferase (molybdopterin biosynthesis)	Coenzyme transport and metabolism [H]	0.70
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.70
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.65 %
Unclassified	root	N/A	25.35 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.65 %
Unclassified	root	N/A	25.35 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.65 %
Unclassified	root	N/A	25.35 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	65.49 %
Unclassified	root	N/A	25.35 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	62.68 %
Unclassified	root	N/A	25.35 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.11 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	49.30 %
Unclassified	root	N/A	25.35 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.35 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.82 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.11 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.41 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.70 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.70 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.35 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.82 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	2.11 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.41 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.70 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.70 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.35 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.82 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	2.11 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.41 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.70 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.70 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.35 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.82 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.11 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.41 %
unclassified Pseudonocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia	0.70 %
Actinoplanes missouriensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes missouriensis	0.70 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.35 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.82 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.11 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.41 %
Pseudonocardia sp. S2-4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. S2-4	0.70 %
Actinoplanes missouriensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes missouriensis	0.70 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_120917332	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300005166\|Ga0066674_10395153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	642	Open in IMG/M
3300005177\|Ga0066690_10676212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	686	Open in IMG/M
3300005186\|Ga0066676_10542007	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300005187\|Ga0066675_10712796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	754	Open in IMG/M
3300005332\|Ga0066388_106582778	Not Available	585	Open in IMG/M
3300005335\|Ga0070666_11115849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	586	Open in IMG/M
3300005436\|Ga0070713_100046383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3565	Open in IMG/M
3300005436\|Ga0070713_102084894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	550	Open in IMG/M
3300005467\|Ga0070706_100163195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2080	Open in IMG/M
3300005518\|Ga0070699_100831901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	845	Open in IMG/M
3300005553\|Ga0066695_10104958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1735	Open in IMG/M
3300005764\|Ga0066903_103222881	Not Available	882	Open in IMG/M
3300005764\|Ga0066903_104298934	Not Available	761	Open in IMG/M
3300005764\|Ga0066903_104443690	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300005764\|Ga0066903_106338111	Not Available	617	Open in IMG/M
3300005764\|Ga0066903_107947868	Not Available	544	Open in IMG/M
3300005764\|Ga0066903_108243277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	533	Open in IMG/M
3300005840\|Ga0068870_10269519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1063	Open in IMG/M
3300005894\|Ga0075270_1041463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	659	Open in IMG/M
3300006049\|Ga0075417_10060876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1652	Open in IMG/M
3300006163\|Ga0070715_10117550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1263	Open in IMG/M
3300006163\|Ga0070715_10141625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1168	Open in IMG/M
3300006173\|Ga0070716_100021519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3399	Open in IMG/M
3300006173\|Ga0070716_100208783	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300006175\|Ga0070712_100307813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1284	Open in IMG/M
3300006175\|Ga0070712_101422881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	605	Open in IMG/M
3300006880\|Ga0075429_101901667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes missouriensis	516	Open in IMG/M
3300010043\|Ga0126380_12191974	Not Available	510	Open in IMG/M
3300010047\|Ga0126382_12033110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	548	Open in IMG/M
3300010048\|Ga0126373_13113243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	517	Open in IMG/M
3300010359\|Ga0126376_12592945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	555	Open in IMG/M
3300010360\|Ga0126372_10059791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2642	Open in IMG/M
3300010360\|Ga0126372_10739679	Not Available	966	Open in IMG/M
3300010361\|Ga0126378_10672379	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300010361\|Ga0126378_10928061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	976	Open in IMG/M
3300010361\|Ga0126378_12337014	Not Available	610	Open in IMG/M
3300010366\|Ga0126379_10353727	Not Available	1500	Open in IMG/M
3300010366\|Ga0126379_12597198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300010376\|Ga0126381_103890283	Not Available	582	Open in IMG/M
3300010397\|Ga0134124_10686728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1012	Open in IMG/M
3300011003\|Ga0138514_100087346	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300012209\|Ga0137379_11198176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	666	Open in IMG/M
3300012351\|Ga0137386_10400524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	988	Open in IMG/M
3300012358\|Ga0137368_10778733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	594	Open in IMG/M
3300012359\|Ga0137385_10141383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2120	Open in IMG/M
3300012359\|Ga0137385_10658217	Not Available	877	Open in IMG/M
3300012487\|Ga0157321_1012903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	673	Open in IMG/M
3300012506\|Ga0157324_1027852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	621	Open in IMG/M
3300012683\|Ga0137398_10786731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	664	Open in IMG/M
3300012915\|Ga0157302_10454173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	542	Open in IMG/M
3300012960\|Ga0164301_11477397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	559	Open in IMG/M
3300012977\|Ga0134087_10322044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	731	Open in IMG/M
3300013100\|Ga0157373_10344740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1062	Open in IMG/M
3300013104\|Ga0157370_10599779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1008	Open in IMG/M
3300016294\|Ga0182041_10519007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1036	Open in IMG/M
3300016387\|Ga0182040_11836671	Not Available	519	Open in IMG/M
3300016404\|Ga0182037_11751866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	554	Open in IMG/M
3300016422\|Ga0182039_11964990	Not Available	538	Open in IMG/M
3300018431\|Ga0066655_11066735	Not Available	563	Open in IMG/M
3300018476\|Ga0190274_11141919	Not Available	860	Open in IMG/M
3300020002\|Ga0193730_1037035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1414	Open in IMG/M
3300020022\|Ga0193733_1161778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	599	Open in IMG/M
3300020579\|Ga0210407_10234285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1429	Open in IMG/M
3300020582\|Ga0210395_10132033	All Organisms → cellular organisms → Bacteria	1858	Open in IMG/M
3300021168\|Ga0210406_11178961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	559	Open in IMG/M
3300021171\|Ga0210405_11086945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	599	Open in IMG/M
3300021180\|Ga0210396_11719266	Not Available	509	Open in IMG/M
3300021402\|Ga0210385_10566940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	864	Open in IMG/M
3300021478\|Ga0210402_10960146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	781	Open in IMG/M
3300021479\|Ga0210410_10197424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1802	Open in IMG/M
3300021559\|Ga0210409_10435769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1170	Open in IMG/M
3300021560\|Ga0126371_10191890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2134	Open in IMG/M
3300024232\|Ga0247664_1176201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	506	Open in IMG/M
3300024254\|Ga0247661_1087058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	587	Open in IMG/M
3300024325\|Ga0247678_1076920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	556	Open in IMG/M
3300025898\|Ga0207692_10557588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	733	Open in IMG/M
3300025905\|Ga0207685_10566176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	606	Open in IMG/M
3300025908\|Ga0207643_10265050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1061	Open in IMG/M
3300025917\|Ga0207660_10396960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1110	Open in IMG/M
3300025928\|Ga0207700_11043477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	731	Open in IMG/M
3300025929\|Ga0207664_11068220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	722	Open in IMG/M
3300025932\|Ga0207690_11104482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	661	Open in IMG/M
3300025933\|Ga0207706_10565990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	978	Open in IMG/M
3300025934\|Ga0207686_10444592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	996	Open in IMG/M
3300025935\|Ga0207709_10463440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	982	Open in IMG/M
3300026088\|Ga0207641_11637782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	645	Open in IMG/M
3300026550\|Ga0209474_10539098	All Organisms → cellular organisms → Bacteria → Terrabacteria group	592	Open in IMG/M
3300026805\|Ga0207507_105717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	505	Open in IMG/M
3300027119\|Ga0209522_1023967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	726	Open in IMG/M
3300027575\|Ga0209525_1108695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	653	Open in IMG/M
3300027853\|Ga0209274_10662117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300027874\|Ga0209465_10080230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1588	Open in IMG/M
3300028906\|Ga0308309_10465280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1090	Open in IMG/M
3300030510\|Ga0268243_1030537	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300031545\|Ga0318541_10158349	Not Available	1245	Open in IMG/M
3300031549\|Ga0318571_10224042	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300031640\|Ga0318555_10262872	Not Available	933	Open in IMG/M
3300031681\|Ga0318572_10263423	Not Available	1015	Open in IMG/M
3300031731\|Ga0307405_10140175	All Organisms → cellular organisms → Bacteria	1684	Open in IMG/M
3300031736\|Ga0318501_10382096	Not Available	759	Open in IMG/M
3300031740\|Ga0307468_101341156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	654	Open in IMG/M
3300031744\|Ga0306918_10772418	Not Available	751	Open in IMG/M
3300031744\|Ga0306918_11189571	Not Available	589	Open in IMG/M
3300031751\|Ga0318494_10615161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	635	Open in IMG/M
3300031751\|Ga0318494_10765719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	565	Open in IMG/M
3300031751\|Ga0318494_10958460	Not Available	502	Open in IMG/M
3300031765\|Ga0318554_10246812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1017	Open in IMG/M
3300031793\|Ga0318548_10364901	Not Available	709	Open in IMG/M
3300031795\|Ga0318557_10236403	Not Available	836	Open in IMG/M
3300031796\|Ga0318576_10072797	Not Available	1531	Open in IMG/M
3300031799\|Ga0318565_10155068	Not Available	1111	Open in IMG/M
3300031821\|Ga0318567_10760392	Not Available	549	Open in IMG/M
3300031831\|Ga0318564_10251274	Not Available	784	Open in IMG/M
3300031846\|Ga0318512_10009254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3736	Open in IMG/M
3300031846\|Ga0318512_10116312	Not Available	1269	Open in IMG/M
3300031860\|Ga0318495_10173500	Not Available	972	Open in IMG/M
3300031860\|Ga0318495_10182592	Not Available	945	Open in IMG/M
3300031893\|Ga0318536_10629412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	536	Open in IMG/M
3300031896\|Ga0318551_10514906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	687	Open in IMG/M
3300031897\|Ga0318520_10092930	All Organisms → cellular organisms → Bacteria	1680	Open in IMG/M
3300031901\|Ga0307406_10644921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. S2-4	878	Open in IMG/M
3300031941\|Ga0310912_11167539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	587	Open in IMG/M
3300031946\|Ga0310910_10055751	All Organisms → cellular organisms → Bacteria	2802	Open in IMG/M
3300031996\|Ga0308176_10530282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1200	Open in IMG/M
3300032009\|Ga0318563_10412395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	731	Open in IMG/M
3300032065\|Ga0318513_10367583	Not Available	701	Open in IMG/M
3300032066\|Ga0318514_10467244	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300032089\|Ga0318525_10410852	Not Available	694	Open in IMG/M
3300032091\|Ga0318577_10204019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	946	Open in IMG/M
3300032126\|Ga0307415_100366288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1219	Open in IMG/M
3300032180\|Ga0307471_101918815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	741	Open in IMG/M
3300032205\|Ga0307472_101013915	Not Available	779	Open in IMG/M
3300032770\|Ga0335085_10665509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1162	Open in IMG/M
3300032783\|Ga0335079_12295425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	512	Open in IMG/M
3300032805\|Ga0335078_10210980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2685	Open in IMG/M
3300032805\|Ga0335078_12568080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	523	Open in IMG/M
3300032895\|Ga0335074_10425520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1424	Open in IMG/M
3300032955\|Ga0335076_10183933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1996	Open in IMG/M
3300033134\|Ga0335073_10043549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6053	Open in IMG/M
3300033475\|Ga0310811_11306529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	576	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.03%
Host-Associated	Host-Associated	11.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.03%
Plants	Host-Associated → Plants	11.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.32%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.52%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.68%
Loam	Environmental → Terrestrial → Soil → Loam	19.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.34%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.63%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.52%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.11%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.21%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.34%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.63%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.11%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.70%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.70%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.15%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.15%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.23%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.41%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.41%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.41%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.41%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.41%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.41%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.41%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.70%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.70%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.70%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005894	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_203	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012487	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.old.130510	Host-Associated	Open in IMG/M
3300012506	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.old.040610	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300024325	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026805	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-BECK01-A (SPAdes)	Environmental	Open in IMG/M
3300027119	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1209173321	3300000956	Soil	MSVPPVPKLVAPGEGKTVMLFGVRFEYKVVSADSGGGMAMMEVEIPAGTLVKPH
Ga0066674_103951532	3300005166	Soil	MTGAFSPKVVAPGEGTTVKLFGVRFGYKVVSADSGGALAAMEVEIPAGTLV
Ga0066690_106762122	3300005177	Soil	VSGAFPPKVVAADEGKTVMLFGVRFGYKVVSGDSGGRLAVLEVEIP
Ga0066676_105420071	3300005186	Soil	MSGAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGRLAVLEVEIPPKTLVKP
Ga0066675_107127961	3300005187	Soil	MSGTFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGRLAVLEV
Ga0066388_1065827781	3300005332	Tropical Forest Soil	MTEAFSPKLVAPGEGKIVMLFSVRFSYKVVSTDCDGSLAILEVDIPARTLVKP
Ga0070666_111158492	3300005335	Switchgrass Rhizosphere	VSEPFPPRVVAAGEGKTVMLFGVRFGYKVVSGDSGGRLAVLEVEI
Ga0070713_1000463831	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VSGAFPPKVVRAGEGKTVMLFGVRFGYKVVSGDSGGRLAVLEVEIPAGTLVKPH
Ga0070713_1020848941	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTGAFSPKAVAPGGGATVKLFGVRFTYKVVSDDCGGTLAVMDVDIPAGTLVKPHSHAREDEF
Ga0070706_1001631951	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTGAFSPKMVAPGQGKTVLLFGVRFGYKIVSADCGASLAALEVEIPARTLVK
Ga0070699_1008319012	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTGAFSPKAVAPGGGATVKLFGVRFTYKVVSDDCGGTLAVMEVDIPAG
Ga0066695_101049581	3300005553	Soil	VSGAFPPKVMGAGEGKTVMLFGVRFGYKVVSGDSGG
Ga0066903_1032228814	3300005764	Tropical Forest Soil	MTGAFTPKLVAPGEGKTVMLFGVRFSYKVVSADSGGSLAVLEVEIPAKTLVKPHKHA
Ga0066903_1042989342	3300005764	Tropical Forest Soil	MTTAFSPRMVAPGEGKTVMLFGVRFSYKVESAHSG
Ga0066903_1044436901	3300005764	Tropical Forest Soil	MAGAITPRLVAPGEGKTVMLFGVRFSYKVVSADSGGSLAVLEVEIPAKTLVKPH
Ga0066903_1063381112	3300005764	Tropical Forest Soil	MTMAFSPRMVAPGEGKTVMLFGVRFSYKVESAHSGGS
Ga0066903_1079478682	3300005764	Tropical Forest Soil	MSTAFSPRMVAPGEGKTVMLFGVRFSYKVESAHSGGSLAVL
Ga0066903_1082432771	3300005764	Tropical Forest Soil	MTEAFSPKLVAPDEGRTVRLMGVRFGYKVVSGDSGG
Ga0068870_102695194	3300005840	Miscanthus Rhizosphere	MSGAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGRLAVLEVEIPP
Ga0075270_10414632	3300005894	Rice Paddy Soil	MAPAVSPKVVAPGEGKTVKLFGVRFSYKVESADSGASLAAMEVEIPPG
Ga0075417_100608764	3300006049	Populus Rhizosphere	MTEAFIPKLVTPGQGKTVMLFGVRFSYKVVSADTGGSLAVLEVTIPPGTLVKPHNHSRED
Ga0070715_101175501	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MTTAFSPRMVAPEEGKTVMLFGVRFSYKVESTHSGGSLAVLEVQIPSKTLVK
Ga0070715_101416252	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VRGAFPPKVVGAGEGKTVMLFGVRFGYKVVSGDSGGRLAVLEVEIPAGTLVKL*
Ga0070716_1000215191	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VSGAFPPKVVGAGEGKTAMLFGVRFGYKVVSGDSGGRLAVLEVEIPAGTL
Ga0070716_1002087831	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSGAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGRLAVLEV
Ga0070712_1003078133	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VSGAFPPKVVGAGEGKTVMLFGVRFGYKVVSGDSGGRLAVLEVEIPAGTLVK
Ga0070712_1014228811	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTGAFSPKAVAPGGGATVKLFGVRFTYKVVSDDCGGT
Ga0075429_1019016671	3300006880	Populus Rhizosphere	MTEAFIPKLVTPGQGKTVMLFGVRFSYKVVSADTGGSLAVLEVTIPPGTLVKPH
Ga0126380_121919741	3300010043	Tropical Forest Soil	MTGAFTSKLVAPGEGTTVMLFSIRFSYKVVSADSGGSLAVLEVEIPAKTLVKPH
Ga0126382_120331102	3300010047	Tropical Forest Soil	VSGAFPPKVVAAGEGKAVMLFGVRFGYKVVSGDSGGRLAVLEVEIPPRTLVKPHSHARE
Ga0126373_131132432	3300010048	Tropical Forest Soil	MTGAFPARVVAAGEGKTVMLFGVRFGYKIVSGDSGGKLAVLEVEIPAGTLV
Ga0126376_125929452	3300010359	Tropical Forest Soil	MTEAFPPKVVAPGEGKTVMLFGVRFGYKVVSEDSAGRLAVLEVEIPARTLVKP
Ga0126372_100597915	3300010360	Tropical Forest Soil	MSGAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGRLAVLEVEIPPRTLV
Ga0126372_107396792	3300010360	Tropical Forest Soil	MTGAFTPKLVAPGEGKTVMLFGVRFSYKVVSADSGGSLAVLEVEIPAKTLVKPH
Ga0126378_106723794	3300010361	Tropical Forest Soil	MTGAFTPKLVAPGEGKTVMLFGVRFSYKVVSADSGGSLAVLEVEIPAKTLVKPHNHSRE
Ga0126378_109280612	3300010361	Tropical Forest Soil	MAGPFTPRLVAPGEGKTVMLFGVRFSYKVVSADSGGSLAVLEVEIPAK
Ga0126378_123370141	3300010361	Tropical Forest Soil	MMTGAFSPKVVAPGEGTTVKLFGVRFGYKVVSADSGGALAVME
Ga0126379_103537274	3300010366	Tropical Forest Soil	MTGAFTPKLLAPGEGKTVMLFGVRFSYKVVSADSGGSLAV
Ga0126379_125971981	3300010366	Tropical Forest Soil	MMTGAFSPKVVAPGEGTTVKLFGVRFGYKVVSADSGGALAVMEVEI
Ga0126381_1038902831	3300010376	Tropical Forest Soil	MTEAFSPKLVEPGDGKIVMLFGVRFNYKVVSTDCDVSLAILEVDIPP
Ga0134124_106867281	3300010397	Terrestrial Soil	VSEPFPPRVVAAGEGKTVMLFGVRFGYKVVSGDSGGRLAVLEVEIPPRTLVKPHS
Ga0138514_1000873462	3300011003	Soil	VTTPLTPKLLAPGEGASVMLFGVRFDYKLRSADSGGSLAVLEVEIPGKTLVKPHNH
Ga0137379_111981761	3300012209	Vadose Zone Soil	MTAVFSPKMVAPGEGKTVMLFGVRFSYKVESADCGGSLVVLGVEIPARTFVKPHNHSR
Ga0137386_104005241	3300012351	Vadose Zone Soil	VSGAFPPKVVGAGEGKTVMLFGVRFGYKVVSGDSGGR
Ga0137368_107787332	3300012358	Vadose Zone Soil	MSVVPRPKLVAPGEGKTVRLFGVRFDYKVESADSGGTLAVLEVEIPAKTLVKPHNHAR
Ga0137385_101413834	3300012359	Vadose Zone Soil	MPTSTPPTPKLVAPGEGKTVKLFGVRFRYKVESADSGGSLAVLE
Ga0137385_106582172	3300012359	Vadose Zone Soil	MPKLVAPGDGKTVMLFGVRFEYKVVTADSGGGLAMMEVEIPAGTLVKPHN
Ga0137385_107699611	3300012359	Vadose Zone Soil	MPTPTPPTPKLVAPGEGKTVKLFGVRFRYKVESADSGGSLAVLE
Ga0157321_10129032	3300012487	Arabidopsis Rhizosphere	MSGAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSDGRLAVLEVEIPPRT
Ga0157324_10278521	3300012506	Arabidopsis Rhizosphere	MSGAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSDGRLAVLEVEIPPRTLVKPHSH
Ga0137398_107867311	3300012683	Vadose Zone Soil	VSGAFPPKVVGAGEGKTVMLFGVRFGYKVVSGDSGGKLAVLEV
Ga0157302_104541731	3300012915	Soil	VSEPFPPRVVAAGEGKTVMLFGVRFGCKVVSGDSG
Ga0164301_114773971	3300012960	Soil	MSGAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGRLAVLEVEIPPRTLVKPHSHAREDEF
Ga0134087_103220441	3300012977	Grasslands Soil	VSGAFPPKVVAADEGKTVMLFGVRFGYKVVSGDSGGRLAVLEVEIPPKTLVKPHSHARE
Ga0157373_103447401	3300013100	Corn Rhizosphere	MSGAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGRLAVLEVEIPPRTLVKPH
Ga0157370_105997793	3300013104	Corn Rhizosphere	VSGAYPPKVVGAGEGKTVMLFGVRFGYKVVSADSGGR
Ga0182041_105190072	3300016294	Soil	MAADIASPFSPKVVAPGEGKTVMLFGVRFSYKVETADSGGTLAVLEVEIPAHTLVKPHN
Ga0182040_118366711	3300016387	Soil	MTTAFSPRMLAPGEGKTVMLFGVRFSYKVESSHSGGSLAVLEVQIPAKTLVK
Ga0182037_117518661	3300016404	Soil	MPAAFSHKAVAPGEGKTVLLFGVRFSYKIVSADSAGQLAILEVEIP
Ga0182039_119649901	3300016422	Soil	MTTAFSPRMVAPGEGKTVMLFGVRFSYKVESAHSGGSLTVLEVQIPAKTLVKPHNHSRE
Ga0066655_110667352	3300018431	Grasslands Soil	MTEAFIPKLVTPGQGKTVMLFGVRFSYKVVSADTGGSLAVLEVRIP
Ga0190274_111419192	3300018476	Soil	MLTPSSLSPKVVAPGEGKTVELFRVRFDYKVESADSGGNLAVLEIE
Ga0193730_10370354	3300020002	Soil	VSGAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGRLAVLE
Ga0193733_11617782	3300020022	Soil	MSGAFPPKLVAGGEGKTVMLFGVRFGYKVVSGDSGGRLAVLEVEIPPRTLVKP
Ga0210407_102342851	3300020579	Soil	VTAGIPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGRLAVLEVEIPAGTLVKPRGTAHAVWNAGSTP
Ga0210395_101320333	3300020582	Soil	VSGAFPPKVVAVSEGKTVMLFGVRFGYKVVSGDSGGRLAVL
Ga0210406_111789611	3300021168	Soil	VTAGIPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGRLA
Ga0210405_110869451	3300021171	Soil	VTAGIPPKVVAAGEGKTVMLFGVRFGYKVVSGDSG
Ga0210396_117192662	3300021180	Soil	MTADPASPFSPKVTAPGAGKTVMLFGVRFCYKVETADSGGTLAVMEVEIPAHTLVK
Ga0210385_105669401	3300021402	Soil	MTPVPSPKVVAPGAGKTVMLFGVRFSYMIESADSGGSLAVLEVQIPPRT
Ga0210402_109601461	3300021478	Soil	VSGAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGRLAVLEVEIPAGTLVKPHS
Ga0210410_101974244	3300021479	Soil	VSGAFPPKVVAADEGKTVMLFGVRFGYKVVSGDSGGRLAVLEVDPRA
Ga0210409_104357691	3300021559	Soil	VTAGIPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGRLAVLEVEIPAGTLVKPRG
Ga0126371_101918904	3300021560	Tropical Forest Soil	MTGAFPARVVAPGEGKTVMLFGVRFGYKIVSGDSGGKLAVLEVEI
Ga0247664_11762011	3300024232	Soil	MSGAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGRLAVLEVKIPPRTLVKPHSHAR
Ga0247661_10870582	3300024254	Soil	MSGAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGRLAVLEVEIPPR
Ga0247678_10769201	3300024325	Soil	MSGAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGRLAVLEVEIPPRT
Ga0207692_105575883	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VSGAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGRLAVLEVE
Ga0207685_105661762	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MTTAFSPRMVAPEEGKTVMLFGVRFSYKVESTHSGGSLAVLEVQIPSKTLVKPHNH
Ga0207643_102650501	3300025908	Miscanthus Rhizosphere	MSGAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGRLAVLEVK
Ga0207660_103969603	3300025917	Corn Rhizosphere	MSGAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGRLAVLEVEIPPRTLVKPHSH
Ga0207700_110434771	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VSGAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGRLAVLEV
Ga0207664_110682203	3300025929	Agricultural Soil	VSGAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGRL
Ga0207690_111044821	3300025932	Corn Rhizosphere	MSGAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGRLAVLEVEIP
Ga0207706_105659903	3300025933	Corn Rhizosphere	MSGAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGRL
Ga0207686_104445921	3300025934	Miscanthus Rhizosphere	MSGAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGRLAVLEVEIPPRTLVKPHSHARE
Ga0207709_104634403	3300025935	Miscanthus Rhizosphere	MSGAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGRLAV
Ga0207641_116377821	3300026088	Switchgrass Rhizosphere	MSGAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGRLAVLEVEIPPRTLVKPHSHSRE
Ga0209474_105390981	3300026550	Soil	MAGAFTPKLVTPEEGKTVKLFGVQFSYKVVSADSGGS
Ga0207507_1057172	3300026805	Soil	MSGAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSG
Ga0209522_10239671	3300027119	Forest Soil	MSGAFPPKVVAAGEGTTVMLFGVRFGYKVVSGDSGGRLAVLEVEIPPRTLVKPHSHAREDEFSL
Ga0209525_11086951	3300027575	Forest Soil	MTADTASPFSPKAIAPGGGKTVMLFGVRFSYKVEAADSGGTLAVMEVEIPAHTLVKP
Ga0209274_106621172	3300027853	Soil	MTPVPSPKVVAPGAGKTVMLFGVRFSYKIESADSGGSLAVLEVQI
Ga0209465_100802301	3300027874	Tropical Forest Soil	MTGAFTPMLVAPGEGTTLMLFGVRFSYKVVSADSSGNLAV
Ga0308309_104652801	3300028906	Soil	MTADPASPFSPKVTAPGAGKTVMLFGVRFCYKVETADSGGTLAVMEVEIPAHTLVKPHNH
Ga0268243_10305372	3300030510	Soil	MTTAPSPKLKAPGESKTVQLYGVRFDYKVEHADSGGSVALLEVAIPPGTLVKPHNHTRED
Ga0318541_101583492	3300031545	Soil	MTGAFSPKVVAPGEGTTVKLFGVRFGYKVVSADSGGALAVME
Ga0318571_102240421	3300031549	Soil	MTADIASPFSPKVVAPGEGKTVMLFGVRFSYKIESHDSAGKLAVLEVE
Ga0318555_102628724	3300031640	Soil	MTVAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGKLAVLEVEIPAGT
Ga0318572_102634231	3300031681	Soil	MTVAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGKLAVLEVEIPAGTLVKPHSHAREDEF
Ga0307405_101401751	3300031731	Rhizosphere	MPTPSTPRLVAPGEGTTVRLFGVRFDYKVESADSGGSLAVLEVEIPAKTL
Ga0318501_103820961	3300031736	Soil	MTVAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGKLAVLEVEIPAWTLVKPHSHAREDEFS
Ga0307468_1013411562	3300031740	Hardwood Forest Soil	VSGAFPPKVVGAGEGKTVMLFGVRFGYKVVSGDSG
Ga0306918_107724182	3300031744	Soil	MTTAFSPRTVAPGEGKTVMLFGVRFSYKVESAHSGGSLAVLEVQIPAKTL
Ga0306918_111895713	3300031744	Soil	MTGAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGKLAVLEVEIPAG
Ga0318494_106151611	3300031751	Soil	MPAAFSHKAVAPGEGKTVLLFGVRFSYKIVSADSAGQLAILEVEIPPK
Ga0318494_107657192	3300031751	Soil	MTADIASPFSPKVVAPGEGKTVMLFGVRFSYKIESHDSAGKLAVLEVEIPAHT
Ga0318494_109584601	3300031751	Soil	MTGAFTPKLVAPGEGKTVMLSGVRFSYKVVSAESGGSLALLAVEIPPRPW
Ga0318554_102468122	3300031765	Soil	MTADIASPFSPKVVAPGEGKTVMLFGVRFSYKIESHDSAGKLAVLEVEIPAHTLVKP
Ga0318548_103649011	3300031793	Soil	MTTAFSPRTVAPGEGKTVMLFGVRFSYKVESAHSGGSLTVLEVQIPAKTL
Ga0318557_102364034	3300031795	Soil	MTGAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGKLAVLEVEIPAGTL
Ga0318576_100727972	3300031796	Soil	MTGAFSPKVVAPGEGTTVKLFGVRFGYKVVSADSGGALAVMEVEIPSG
Ga0318565_101550682	3300031799	Soil	MTADIASPFSPKVVAPGEGKTVMLFGVRFSYKVESHDSAGKLAVLEVEIPAHT
Ga0318567_107603922	3300031821	Soil	MTEVFSPKLVAPGEGKIVMLFGVRFSYKVISADCAGSLAVLEVDIPARTLVKPHSHSREN
Ga0318564_102512741	3300031831	Soil	MTTAFSPRTVAPGEGKTVMLFGVRFSYKVESAHSGGSLAVLEVQIPAK
Ga0318512_100092541	3300031846	Soil	MTGAFSPKVVAPGEGTTVKLFGVRFGYKVVSADSGGALAVMEVEIPAGTLVKPH
Ga0318512_101163123	3300031846	Soil	MTEVFSPKLVAPGEGKIVMLFGVRFSYKVISADCAGSLAVLEVDIPAR
Ga0318495_101735001	3300031860	Soil	MTEAFSPKLVAPGEGKIVMLFGVRFSYKVVSADCAGSLAVLEVDIPARTLV
Ga0318495_101825922	3300031860	Soil	MTTAFSPRTVAPGEGKTVMLFGVRFSYKVESAHSGGSLAVLEVQI
Ga0318536_106294122	3300031893	Soil	MAADIASPFSPKVVAPGEGKTVMLFGVRFSYKVETADSGGTLAVLEVEIPAH
Ga0318551_105149061	3300031896	Soil	MPAAFSHKAVAPGEGKTVLLFGVRFSYKIVSADSAGQLAILE
Ga0318520_100929301	3300031897	Soil	MTVAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGKLAVLEVE
Ga0307406_106449212	3300031901	Rhizosphere	MPTPSTPRLVAPGEGTTVRLFGVRFDYKVESADSGGSLAVLEVEIPAK
Ga0310912_111675391	3300031941	Soil	MAADTASPFSPKMVAPGEGKTVMLFGVRFSYKVDTTDSGGTLAVLEVEIPAHTLV
Ga0310910_100557511	3300031946	Soil	MTTAFSPRMVAPGEGKTVMLFGVRFSYKVESAHSGGSLTVLEVQIPAKTLVKPHSHSRED
Ga0308176_105302822	3300031996	Soil	VTETFAPKLVAPGEGKAVMLLGVRFSYKVVSADSGGKLAVLEVEIPPATL
Ga0318563_104123951	3300032009	Soil	MPAAFSHKAVAPGEGKTVLLFGVRFSYKIVSADSAGQLAILEVEIPPKTLVKPH
Ga0318513_103675831	3300032065	Soil	MTVAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSG
Ga0318514_104672442	3300032066	Soil	MTADIASPFSPKVVAPGEGKTVMLFGVRFSYKVESHDSAGKLAVLEVEIPAHTLVKPHNH
Ga0318525_104108522	3300032089	Soil	MTTAFSPRMLAPGEGKTVMLFGVRFSYKVESSHSGGSLAVLEV
Ga0318577_102040193	3300032091	Soil	MTHPFDPKLVAPGDGKTVMLFGVRFSYKVESSDCAGSLAVLEVEIPAGTLVKPHSHSHEDEFSLVLS
Ga0307415_1003662884	3300032126	Rhizosphere	VTGTRIPRHVAVGDGRTVQLFGVRFRYKIESADTDGSLCVLEVEIPPK
Ga0307471_1019188151	3300032180	Hardwood Forest Soil	MSGAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGRLAVLEVEIPPRTLVKPHSHARED
Ga0307472_1010139152	3300032205	Hardwood Forest Soil	VVAPGEGKTVMLFGVRFGYKVVSADSGGRLAVLEVEIPVRTLVKPHRHAREDDWIEELERTYGVKL
Ga0335085_106655093	3300032770	Soil	MTGAFPPKAVAAGEGKTVMLFGVRFGYKVVSQDSAGR
Ga0335079_122954252	3300032783	Soil	MTGAFRPKVVAADEGKTVMLFGVRFGYKVVSEDSAGRLAVLEVEIPPG
Ga0335078_102109803	3300032805	Soil	MTPAPSPKVVAPGAGKNVMLFGVRFSYKIESADSGGSLAVLEIQMRTYGVKL
Ga0335078_125680802	3300032805	Soil	MTGAFPPKVVAAGEGKTVMLFGVRFGYKVVSEDSAGRLAVLEVEIPPGT
Ga0335074_104255203	3300032895	Soil	MGMTADIASPFSPKVIAPGEGKTVMLFGIRFSYKVETADCGGTLAVMEVEIPAHTLVKPHNHTR
Ga0335076_101839334	3300032955	Soil	MTGAFPPKAVAAGEGKTVMLFGVRFGYKVVSQDSAGRLAVLEVEIPPG
Ga0335073_100435491	3300033134	Soil	MTTAFSPRMVAPGEGKTVMLFGVRFSYKVESAHSGGSLAVLEVQIPAKTLVKPHNHSRED
Ga0310811_113065292	3300033475	Soil	MSGAFPPKVVAAGEGKTVMLFGVRFGYKVVSGDSGGRLAVLEVEIPPRTLVK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F052916

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences