NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F052903

Metagenome / Metatranscriptome Family F052903

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F052903
Family Type Metagenome / Metatranscriptome
Number of Sequences 142
Average Sequence Length 56 residues
Representative Sequence MGGHPFPDIPCKLCSKPVDLSVDLSADENGKAVHEECYVKHITSSRSEMNATMTAD
Number of Associated Samples 96
Number of Associated Scaffolds 142

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 88.03 %
% of genes near scaffold ends (potentially truncated) 16.20 %
% of genes from short scaffolds (< 2000 bps) 65.49 %
Associated GOLD sequencing projects 84
AlphaFold2 3D model prediction Yes
3D model pTM-score0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (88.732 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil
(16.901 % of family members)
Environment Ontology (ENVO) Unclassified
(19.014 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(65.493 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 22.62%    β-sheet: 7.14%    Coil/Unstructured: 70.24%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.51
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 142 Family Scaffolds
PF13545HTH_Crp_2 3.52
PF00196GerE 3.52
PF11964SpoIIAA-like 2.82
PF08240ADH_N 2.82
PF00027cNMP_binding 2.11
PF00072Response_reg 1.41
PF13450NAD_binding_8 0.70
PF03102NeuB 0.70
PF00210Ferritin 0.70
PF07676PD40 0.70
PF00871Acetate_kinase 0.70
PF03951Gln-synt_N 0.70
PF13673Acetyltransf_10 0.70
PF14125DUF4292 0.70
PF01764Lipase_3 0.70
PF13463HTH_27 0.70
PF13411MerR_1 0.70
PF13520AA_permease_2 0.70
PF00753Lactamase_B 0.70
PF12704MacB_PCD 0.70
PF00487FA_desaturase 0.70
PF07730HisKA_3 0.70
PF04366Ysc84 0.70
PF01391Collagen 0.70
PF07519Tannase 0.70
PF02894GFO_IDH_MocA_C 0.70
PF05065Phage_capsid 0.70
PF12833HTH_18 0.70
PF13602ADH_zinc_N_2 0.70
PF13481AAA_25 0.70
PF00398RrnaAD 0.70
PF05532CsbD 0.70
PF13847Methyltransf_31 0.70
PF06245DUF1015 0.70
PF04851ResIII 0.70
PF14417MEDS 0.70
PF12680SnoaL_2 0.70
PF05598DUF772 0.70
PF00440TetR_N 0.70
PF08706D5_N 0.70
PF08532Glyco_hydro_42M 0.70
PF00334NDK 0.70
PF03544TonB_C 0.70
PF09900DUF2127 0.70
PF04986Y2_Tnp 0.70
PF01029NusB 0.70
PF01566Nramp 0.70
PF00589Phage_integrase 0.70
PF09137Glucodextran_N 0.70
PF00528BPD_transp_1 0.70

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 142 Family Scaffolds
COG2930Lipid-binding SYLF domain, Ysc84/FYVE familyLipid transport and metabolism [I] 0.70
COG4653Predicted phage phi-C31 gp36 major capsid-like proteinMobilome: prophages, transposons [X] 0.70
COG4585Signal transduction histidine kinase ComPSignal transduction mechanisms [T] 0.70
COG4564Signal transduction histidine kinaseSignal transduction mechanisms [T] 0.70
COG4198Uncharacterized conserved protein, DUF1015 familyFunction unknown [S] 0.70
COG3851Signal transduction histidine kinase UhpB, glucose-6-phosphate specificSignal transduction mechanisms [T] 0.70
COG3850Signal transduction histidine kinase NarQ, nitrate/nitrite-specificSignal transduction mechanisms [T] 0.70
COG3426Butyrate kinaseEnergy production and conversion [C] 0.70
COG3387Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 familyCarbohydrate transport and metabolism [G] 0.70
COG3239Fatty acid desaturaseLipid transport and metabolism [I] 0.70
COG3237Uncharacterized conserved protein YjbJ, UPF0337 familyFunction unknown [S] 0.70
COG003016S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity)Translation, ribosomal structure and biogenesis [J] 0.70
COG2089Sialic acid synthase SpsE, contains C-terminal SAF domainCell wall/membrane/envelope biogenesis [M] 0.70
COG1914Mn2+ or Fe2+ transporter, NRAMP familyInorganic ion transport and metabolism [P] 0.70
COG1874Beta-galactosidase GanACarbohydrate transport and metabolism [G] 0.70
COG1398Fatty-acid desaturaseLipid transport and metabolism [I] 0.70
COG0810Periplasmic protein TonB, links inner and outer membranesCell wall/membrane/envelope biogenesis [M] 0.70
COG0673Predicted dehydrogenaseGeneral function prediction only [R] 0.70
COG0282Acetate kinaseEnergy production and conversion [C] 0.70
COG0174Glutamine synthetaseAmino acid transport and metabolism [E] 0.70
COG0105Nucleoside diphosphate kinaseNucleotide transport and metabolism [F] 0.70


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms88.73 %
UnclassifiedrootN/A11.27 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001166|JGI12694J13545_1018852Not Available656Open in IMG/M
3300001471|JGI12712J15308_10087194All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium791Open in IMG/M
3300001593|JGI12635J15846_10702150All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium583Open in IMG/M
3300001593|JGI12635J15846_10830222Not Available529Open in IMG/M
3300002917|JGI25616J43925_10065349All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1547Open in IMG/M
3300004103|Ga0058903_1104380All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium506Open in IMG/M
3300004114|Ga0062593_100227648All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1516Open in IMG/M
3300004643|Ga0062591_101303441All Organisms → cellular organisms → Bacteria → Acidobacteria714Open in IMG/M
3300005434|Ga0070709_10460953All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium959Open in IMG/M
3300005434|Ga0070709_10562583All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium874Open in IMG/M
3300005434|Ga0070709_11096038All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium637Open in IMG/M
3300005435|Ga0070714_101853698All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium589Open in IMG/M
3300005436|Ga0070713_100204612All Organisms → cellular organisms → Bacteria → Acidobacteria1784Open in IMG/M
3300005436|Ga0070713_100523496All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1121Open in IMG/M
3300005529|Ga0070741_10002704All Organisms → cellular organisms → Bacteria46529Open in IMG/M
3300005533|Ga0070734_10873819All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium510Open in IMG/M
3300005534|Ga0070735_10037908All Organisms → cellular organisms → Bacteria3286Open in IMG/M
3300005534|Ga0070735_10102994All Organisms → cellular organisms → Bacteria → Acidobacteria1797Open in IMG/M
3300005534|Ga0070735_10114909All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1686Open in IMG/M
3300005537|Ga0070730_10000980All Organisms → cellular organisms → Bacteria28957Open in IMG/M
3300005537|Ga0070730_10008387All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium8673Open in IMG/M
3300005537|Ga0070730_10020067All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5207Open in IMG/M
3300005541|Ga0070733_10272346All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1116Open in IMG/M
3300005952|Ga0080026_10026798All Organisms → cellular organisms → Bacteria → Acidobacteria1431Open in IMG/M
3300005952|Ga0080026_10076471Not Available908Open in IMG/M
3300005993|Ga0080027_10204272All Organisms → cellular organisms → Bacteria → Acidobacteria772Open in IMG/M
3300005995|Ga0066790_10065352All Organisms → cellular organisms → Bacteria1568Open in IMG/M
3300005995|Ga0066790_10067302All Organisms → cellular organisms → Bacteria1543Open in IMG/M
3300006162|Ga0075030_100476180Not Available993Open in IMG/M
3300006163|Ga0070715_10442691All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium732Open in IMG/M
3300006173|Ga0070716_101085481All Organisms → cellular organisms → Bacteria → Acidobacteria637Open in IMG/M
3300006173|Ga0070716_101142123All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium623Open in IMG/M
3300006854|Ga0075425_102752351All Organisms → cellular organisms → Bacteria → Acidobacteria542Open in IMG/M
3300006893|Ga0073928_10000189All Organisms → cellular organisms → Bacteria148166Open in IMG/M
3300006893|Ga0073928_10017062All Organisms → cellular organisms → Bacteria7734Open in IMG/M
3300007982|Ga0102924_1017509All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5431Open in IMG/M
3300009623|Ga0116133_1028189All Organisms → cellular organisms → Bacteria1387Open in IMG/M
3300009665|Ga0116135_1001627All Organisms → cellular organisms → Bacteria → Acidobacteria11065Open in IMG/M
3300009665|Ga0116135_1183078All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium794Open in IMG/M
3300009665|Ga0116135_1350286All Organisms → cellular organisms → Bacteria → Acidobacteria591Open in IMG/M
3300009759|Ga0116101_1168581Not Available545Open in IMG/M
3300011120|Ga0150983_12086141Not Available673Open in IMG/M
3300011120|Ga0150983_15880526All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium524Open in IMG/M
3300012989|Ga0164305_10170059All Organisms → cellular organisms → Bacteria → Acidobacteria1501Open in IMG/M
3300014495|Ga0182015_10000673All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae48443Open in IMG/M
3300014495|Ga0182015_10001270All Organisms → cellular organisms → Bacteria → Acidobacteria33829Open in IMG/M
3300014495|Ga0182015_10017903All Organisms → cellular organisms → Bacteria5907Open in IMG/M
3300014501|Ga0182024_10006263All Organisms → cellular organisms → Bacteria26230Open in IMG/M
3300014501|Ga0182024_10030953All Organisms → cellular organisms → Bacteria → Acidobacteria9175Open in IMG/M
3300014501|Ga0182024_10066534All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5504Open in IMG/M
3300014501|Ga0182024_10114353All Organisms → cellular organisms → Bacteria3883Open in IMG/M
3300014501|Ga0182024_10120817All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3748Open in IMG/M
3300014501|Ga0182024_10207795All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii2668Open in IMG/M
3300014501|Ga0182024_10909676All Organisms → cellular organisms → Bacteria1059Open in IMG/M
3300015372|Ga0132256_101261924All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium852Open in IMG/M
3300017935|Ga0187848_10190036All Organisms → cellular organisms → Bacteria887Open in IMG/M
3300018009|Ga0187884_10385081All Organisms → cellular organisms → Bacteria → Acidobacteria564Open in IMG/M
3300018023|Ga0187889_10499362Not Available519Open in IMG/M
3300018042|Ga0187871_10066672All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2123Open in IMG/M
3300018042|Ga0187871_10105645All Organisms → cellular organisms → Bacteria → Acidobacteria1620Open in IMG/M
3300018042|Ga0187871_10138325All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas ginsenosidivorax1381Open in IMG/M
3300018042|Ga0187871_10341522All Organisms → cellular organisms → Bacteria → Acidobacteria828Open in IMG/M
3300019166|Ga0184595_106093All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium562Open in IMG/M
3300019786|Ga0182025_1032457All Organisms → cellular organisms → Bacteria → Acidobacteria1964Open in IMG/M
3300019786|Ga0182025_1075480All Organisms → cellular organisms → Bacteria → Acidobacteria2523Open in IMG/M
3300019887|Ga0193729_1009170All Organisms → cellular organisms → Bacteria → Proteobacteria4529Open in IMG/M
3300019888|Ga0193751_1000168All Organisms → cellular organisms → Bacteria59188Open in IMG/M
3300020579|Ga0210407_10039933All Organisms → cellular organisms → Bacteria → Acidobacteria3490Open in IMG/M
3300020579|Ga0210407_10108859All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2110Open in IMG/M
3300020579|Ga0210407_10544699All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae906Open in IMG/M
3300020580|Ga0210403_10010049All Organisms → cellular organisms → Bacteria7727Open in IMG/M
3300020582|Ga0210395_10812943All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium697Open in IMG/M
3300020583|Ga0210401_10307339All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1446Open in IMG/M
3300021046|Ga0215015_10904900All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium → Clostridium sp. C105KSO13657Open in IMG/M
3300021170|Ga0210400_10426241Not Available1095Open in IMG/M
3300021180|Ga0210396_10961695All Organisms → cellular organisms → Bacteria → Acidobacteria725Open in IMG/M
3300021401|Ga0210393_10920303Not Available709Open in IMG/M
3300021404|Ga0210389_10343812All Organisms → cellular organisms → Bacteria → Acidobacteria1171Open in IMG/M
3300021420|Ga0210394_10107576All Organisms → cellular organisms → Bacteria → Acidobacteria2413Open in IMG/M
3300021433|Ga0210391_10038637All Organisms → cellular organisms → Bacteria → Acidobacteria3816Open in IMG/M
3300021477|Ga0210398_10007044All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae10254Open in IMG/M
3300021478|Ga0210402_11109959All Organisms → cellular organisms → Bacteria → Acidobacteria718Open in IMG/M
3300022515|Ga0224546_1001642All Organisms → cellular organisms → Bacteria → Acidobacteria1160Open in IMG/M
3300022557|Ga0212123_10002321All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae46578Open in IMG/M
3300022557|Ga0212123_10023366All Organisms → cellular organisms → Bacteria6820Open in IMG/M
3300022557|Ga0212123_10097785All Organisms → cellular organisms → Bacteria → Acidobacteria2408Open in IMG/M
3300022732|Ga0224569_101164All Organisms → cellular organisms → Bacteria2233Open in IMG/M
3300022734|Ga0224571_100346All Organisms → cellular organisms → Bacteria2455Open in IMG/M
3300022873|Ga0224550_1058925All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium551Open in IMG/M
3300023012|Ga0228597_106351Not Available661Open in IMG/M
3300023255|Ga0224547_1052297Not Available531Open in IMG/M
3300024225|Ga0224572_1066946All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300024251|Ga0247679_1077028All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium561Open in IMG/M
3300025906|Ga0207699_10264990All Organisms → cellular organisms → Bacteria → Acidobacteria1189Open in IMG/M
3300025912|Ga0207707_10155180All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2002Open in IMG/M
3300025928|Ga0207700_10352928All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1281Open in IMG/M
3300025939|Ga0207665_10394412All Organisms → cellular organisms → Bacteria → Acidobacteria1053Open in IMG/M
3300026217|Ga0209871_1008994All Organisms → cellular organisms → Bacteria1876Open in IMG/M
3300026217|Ga0209871_1067788Not Available686Open in IMG/M
3300026281|Ga0209863_10226041All Organisms → cellular organisms → Bacteria → Acidobacteria539Open in IMG/M
3300026294|Ga0209839_10030089All Organisms → cellular organisms → Bacteria2064Open in IMG/M
3300027370|Ga0209010_1006753All Organisms → cellular organisms → Bacteria2256Open in IMG/M
3300027370|Ga0209010_1059252Not Available651Open in IMG/M
3300027439|Ga0209332_1011736All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1741Open in IMG/M
3300027609|Ga0209221_1091424All Organisms → cellular organisms → Bacteria → Acidobacteria787Open in IMG/M
3300027629|Ga0209422_1037407All Organisms → cellular organisms → Bacteria1185Open in IMG/M
3300027651|Ga0209217_1019270All Organisms → cellular organisms → Bacteria2193Open in IMG/M
3300027651|Ga0209217_1209675Not Available521Open in IMG/M
3300027676|Ga0209333_1010695All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas ginsenosidivorax2756Open in IMG/M
3300027857|Ga0209166_10000989All Organisms → cellular organisms → Bacteria25789Open in IMG/M
3300027857|Ga0209166_10013947All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium5136Open in IMG/M
3300027857|Ga0209166_10169105All Organisms → cellular organisms → Bacteria → Acidobacteria1186Open in IMG/M
3300027867|Ga0209167_10239911All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium971Open in IMG/M
3300027869|Ga0209579_10000007All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae762105Open in IMG/M
3300027895|Ga0209624_10003479All Organisms → cellular organisms → Bacteria11116Open in IMG/M
3300027895|Ga0209624_10338362All Organisms → cellular organisms → Bacteria → Acidobacteria1003Open in IMG/M
3300027895|Ga0209624_10348253All Organisms → cellular organisms → Bacteria → Acidobacteria987Open in IMG/M
3300027895|Ga0209624_10696522All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium671Open in IMG/M
3300027908|Ga0209006_10000986All Organisms → cellular organisms → Bacteria26260Open in IMG/M
3300027908|Ga0209006_10023315All Organisms → cellular organisms → Bacteria5604Open in IMG/M
3300027908|Ga0209006_10171250All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1897Open in IMG/M
3300027908|Ga0209006_10199200All Organisms → cellular organisms → Bacteria1740Open in IMG/M
3300027986|Ga0209168_10005415All Organisms → cellular organisms → Bacteria8258Open in IMG/M
3300027986|Ga0209168_10037889All Organisms → cellular organisms → Bacteria2628Open in IMG/M
3300027986|Ga0209168_10054118All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas ginsenosidivorax2138Open in IMG/M
3300028047|Ga0209526_10074539All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2388Open in IMG/M
3300029943|Ga0311340_10606123All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas ginsenosidivorax956Open in IMG/M
3300029999|Ga0311339_10011841All Organisms → cellular organisms → Bacteria → Acidobacteria13604Open in IMG/M
3300030399|Ga0311353_10833975All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium784Open in IMG/M
3300030399|Ga0311353_11535304All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium539Open in IMG/M
3300030618|Ga0311354_11098951All Organisms → cellular organisms → Bacteria → Acidobacteria726Open in IMG/M
3300030762|Ga0265775_113209All Organisms → cellular organisms → Bacteria → Acidobacteria539Open in IMG/M
3300030805|Ga0265756_111061All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria586Open in IMG/M
3300031035|Ga0074026_10878627All Organisms → cellular organisms → Bacteria → Acidobacteria594Open in IMG/M
3300031090|Ga0265760_10315446Not Available555Open in IMG/M
3300031234|Ga0302325_13106132Not Available533Open in IMG/M
3300031525|Ga0302326_12159971All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium712Open in IMG/M
3300031525|Ga0302326_13571088All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium515Open in IMG/M
3300031715|Ga0307476_10644884All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium785Open in IMG/M
3300031823|Ga0307478_10278826All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1364Open in IMG/M
3300032180|Ga0307471_101316759All Organisms → cellular organisms → Bacteria → Acidobacteria884Open in IMG/M
3300032739|Ga0315741_11182005All Organisms → cellular organisms → Bacteria → Acidobacteria685Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil16.90%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil11.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil11.27%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.75%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost6.34%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.63%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa5.63%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland4.93%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring4.23%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland3.52%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil2.82%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.11%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil2.11%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa2.11%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil2.11%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.11%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.41%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil1.41%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.70%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.70%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.70%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.70%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.70%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.70%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.70%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.70%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001166Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2EnvironmentalOpen in IMG/M
3300001471Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300002917Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cmEnvironmentalOpen in IMG/M
3300004103Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF242 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005952Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045EnvironmentalOpen in IMG/M
3300005993Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046EnvironmentalOpen in IMG/M
3300005995Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300007982Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaGEnvironmentalOpen in IMG/M
3300009623Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10EnvironmentalOpen in IMG/M
3300009665Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10EnvironmentalOpen in IMG/M
3300009759Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300014495Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300017935Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40EnvironmentalOpen in IMG/M
3300018009Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40EnvironmentalOpen in IMG/M
3300018023Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100EnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300019166Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019786Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300019888Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021046Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depthEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300022515Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 1-5EnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300022732Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU1Host-AssociatedOpen in IMG/M
3300022734Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU3Host-AssociatedOpen in IMG/M
3300022873Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 10-14EnvironmentalOpen in IMG/M
3300023012Spruce litter microbial communities from Bohemian Forest, Czech Republic - CLU4EnvironmentalOpen in IMG/M
3300023255Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 10-14EnvironmentalOpen in IMG/M
3300024225Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5Host-AssociatedOpen in IMG/M
3300024251Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026217Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)EnvironmentalOpen in IMG/M
3300026281Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)EnvironmentalOpen in IMG/M
3300026294Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)EnvironmentalOpen in IMG/M
3300027370Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027439Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027609Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027629Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027651Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027676Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027857Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027986Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300029943I_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030399II_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030618II_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030762Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030805Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031035Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Humus N1 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031090Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032739Forest Soil Metatranscriptomics Site 2 LB Combined AssemblyEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12694J13545_101885223300001166Forest SoilMGGHPFPEIPCVICSKPLDLRVDLSADENGKAVHEHCYLNRIIGYRSTLVATAIVD*
JGI12712J15308_1008719413300001471Forest SoilMGGHPLPEIDCTICAKPVDLSMELCADEYGKAVHEDCYVKHITSFPNNPADSMTAD*
JGI12635J15846_1070215013300001593Forest SoilMGGHPFSEIPCAICNKAVNLSADLTADENGKAVHEECYVNQITSSHRNNSATV
JGI12635J15846_1083022223300001593Forest SoilMGGHTFPEIPCILCNQTVNLSTDLTADENGKAVHAECYLKHITSSPRDTAATMVAN*
JGI25616J43925_1006534923300002917Grasslands SoilMGGHPFQEMACTICARPVDLQTDLCADENGKAVHEDCYVKHVTTFRLKPSSTVIAH*
Ga0058903_110438013300004103Forest SoilEAFMGGHPFPEIPCKICSKPVDLTVDLYADENGKAVHEDCYVKHIWRNKPGTSVMTAD*
Ga0062593_10022764843300004114SoilMGGHPFPDIPCKLCSKPVDLSADFSADENGKAVHEECYVQHITTSRSNVTPTITAD*
Ga0062591_10130344113300004643SoilMGGHPFPDIPCKLCSKPVDLSVDLSADENGKAVHEECYVKHITSSRSEMNATMTAD*
Ga0070709_1046095313300005434Corn, Switchgrass And Miscanthus RhizosphereMGGYPFPDIPCALCSKPVDLSADLSADEYGKAVHEECYVKRITSSRSKMNATVAAD*
Ga0070709_1056258333300005434Corn, Switchgrass And Miscanthus RhizosphereMGGHPFPDIPCTLCGKPVDLSADLSADETGKAVHEECYVKHITSSRGNMTATMDAD*
Ga0070709_1109603813300005434Corn, Switchgrass And Miscanthus RhizosphereMGGHPFPDIPCILCSKPVDLSADLSADENGKAVHEECYVKHITSSRSKVNGTAAAD*
Ga0070714_10185369813300005435Agricultural SoilMGGHPFPDIPCKLCSKPVDLSVDLSADENGKSVHEECYVKHITSSRSEMNATMTAD*
Ga0070713_10020461223300005436Corn, Switchgrass And Miscanthus RhizosphereMGGHPFADIPCKLCSKPVDLSADLSADENGKAVHEECYVKHITSPRSNMNATIMAAD*
Ga0070713_10052349613300005436Corn, Switchgrass And Miscanthus RhizosphereMGGHPFPDIPCKLCSKPVDLSVDLSADENGKAVHEVCYVKHITSSRSEMNATMTAD*
Ga0070741_1000270483300005529Surface SoilMGGHPFPDISCKLCSKPVDLSVDLSADENGKAVHEECYVKHITSSRSQMHDSVTAD*
Ga0070734_1087381923300005533Surface SoilMGGHPFPDIPCKLCSKPVDLSVDLSADENGKAVHEECYVKHITSSRREMNATMTAD*
Ga0070735_1003790823300005534Surface SoilMGGHPFPEIPCKLCAKAVDLTVDLSADENGKAVHEDCYVEHITGSRRNPPTTMMTD*
Ga0070735_1010299433300005534Surface SoilMGGHPLSDIPCKLCSKPVDLSIDLSADENGNAVHEECYVKHITSSRSKTNATVTPD*
Ga0070735_1011490933300005534Surface SoilMGGHPFPEIPCKLCAKAVDLTVDLSADENGKAVHEDCYVEHIAGSRRNPSTTMMTD*
Ga0070730_10000980123300005537Surface SoilMGGHPFPDIPCKLCSKPVDLSADLSADENGKAVHEECYVKQITSSRSNMTAIMSAD*
Ga0070730_1000838793300005537Surface SoilMGGHSFREIPCKLCGKPVDLSVDLAADENGKAVHEECYVKHITSSRTEMNATMTAD*
Ga0070730_1002006723300005537Surface SoilMGGHPFPDIPCALCSKRIDLSADLCADENGKAVHEECYVKHITSSRRETNATHGCRVD*
Ga0070733_1027234613300005541Surface SoilMGGHPFPDIPCNLCSKPVDLSVDLSADENGKAVHEDCYVKHIKSFRREMNATMTAD*
Ga0080026_1002679823300005952Permafrost SoilMGGHPFSEIPCAICSKAVNLSADLTANENGKAVHEDCYVKHITSSRDSTPATMAAD*
Ga0080026_1007647123300005952Permafrost SoilMGGHIPEIPCTICAKPVDLSIEMCADEHGKAVHEDCYVKHVTSSRSNPPATVMAD*
Ga0080027_1020427213300005993Prmafrost SoilMGGHPFPDIPCKLCSKPVDLSVDLSADENGKAVHQECYVEHITSSRSNMTATVAAD*
Ga0066790_1006535223300005995SoilMGGHTPEIPCTICAKPVDLSIEMCADEHGKAVHEDCYVKHVTSSRSNPLATVMAD*
Ga0066790_1006730213300005995SoilMGGHPFSEIPCAICSKAVNLSADLTANENGKAVHEDCYVKHITSSRDSTPATMAA
Ga0075030_10047618023300006162WatershedsMGGHPFTEIPCKICAKPVDLTVDLYADESGKAVHEDCYVKRVTSCRNDPSSGMTAMTAD*
Ga0070715_1044269123300006163Corn, Switchgrass And Miscanthus RhizosphereMGGHPFPDIPCKLCSKPVDLSADLSADENGKAVHEECYVKHITSPRSNMNATIMAAD*
Ga0070716_10108548123300006173Corn, Switchgrass And Miscanthus RhizosphereDIPCKLCSKPVDLSADLSADENGKAVHEECYVKQITSSHSNMTATMAAD*
Ga0070716_10114212323300006173Corn, Switchgrass And Miscanthus RhizosphereMGGYPFPDIPCALCSKPVDLSADLSADEYGKAVHEECYVKGITSSRSKMNATVAAD*
Ga0075425_10275235123300006854Populus RhizosphereMGGHPFPDIPCKLCSKPVDLSADLSADENGKAVHEECYVKQITSSHSNMTATMAAD*
Ga0073928_1000018973300006893Iron-Sulfur Acid SpringMGGHSFPEIPCTICAEPVDLTVDVYADENGKAIHEDCYVQHLTSSHSNPPAPMMAD*
Ga0073928_1001706283300006893Iron-Sulfur Acid SpringMGGHTPEIPCTICAKPVDLSTEMCADEHGKAVHEDCYVKHVTSSRSNPPATVIAD*
Ga0102924_101750943300007982Iron-Sulfur Acid SpringVGGHPFTEIPCKICAKPVDLSVDLHADEHGKAVHEDCYVKLIASSPSNTVAAIIAD*
Ga0116133_102818923300009623PeatlandMGGHPFPEIFCTICNKTVDLSVDLNANESGKAVHEECYVEHITAAHRQPRLDSTPQS*
Ga0116135_1001627113300009665PeatlandMGGHLFSEIPCILCNKAVDLSADLYADENGKAVHEECYVKHITNSRSNVTASTMAGLS*
Ga0116135_118307813300009665PeatlandMGGHPFPEIPCTLCNKAVNLSADLYADENGKAVHEECYVKHIMSSRSDTTAPMVAN*
Ga0116135_135028613300009665PeatlandMGGHPFPEIPCALCNKAVDLSADLHADENGKAVHEDCYVKHITSSRSDALATMMAD*
Ga0116101_116858113300009759PeatlandMGGHLFPEIPCNICSKPVDLTVDLCADEYSKPVHEECYVKHLATSRPNSPGLAD*
Ga0150983_1208614113300011120Forest SoilEAFMGGHPFPEIPCVLCNKPLDLSADLYADENGKAVHEHCYVNRVTNRQNTPDMCAD*
Ga0150983_1588052613300011120Forest SoilKEAFMGGHPFPEIPCKICSKPVDLTVDLYADENGKAVHEDCYVKHIWRNKPGTSVMTAD*
Ga0164305_1017005933300012989SoilMGGHPFADILCKLCSKPVDLAADLSADENGKAVHEECYVKHITSPRSNMNATIMAAD*
Ga0182015_10000673343300014495PalsaMGGHPLPEIPCIFCRKPVDLEADLSADENGKAVHEECYVKQITDSLDNPLSTVMAN*
Ga0182015_1000127013300014495PalsaMGGHPFQEIPCTVCRKPVDLTVDLSADENGKAVHEECYVKQFTSHREAPIMAE*
Ga0182015_1001790353300014495PalsaMGGHPFSEIPCALCRKAVNLSADLTADENGKAVHEECYVNHVTSSSRNNIAPVVAD*
Ga0182024_10006263283300014501PermafrostMGGHPFPEIPCVICSKPLDLRVDLSADENGKAVHEHCCLKRIIGYRSTLVATAIGD*
Ga0182024_1003095373300014501PermafrostMGGHPFQEIPCIICNKAVDLSADLFADEDGKAVHEECYVKHITTSRSNPAVMAVD*
Ga0182024_1006653453300014501PermafrostMGGHPSTEISCVICSKPVDLTVDLYADENGKAVHSNCYVQHITGSRRNPSAMMAD*
Ga0182024_1011435353300014501PermafrostMGGHPFSEIPCAICNKAVNLSADLTANENGKAVHEECYLKHITGFRSNIPAAVSIE*
Ga0182024_1012081743300014501PermafrostMGGHPFPEIPCTVCAKPVDLAVDLYADENGKAVHEDCYVQRVTSSRRDLPATMMAD*
Ga0182024_1020779543300014501PermafrostMGGHIPEIPCTICAKPVDLSIEMCADEHGKAVHEDCYVNHVTSSRSNSLATVIAD*
Ga0182024_1090967623300014501PermafrostAFMGGHPFPELACTICAKPVDLSVDLYADEYGKAIHEDCYVKQITSSRSNPSAAMMAS*
Ga0132256_10126192413300015372Arabidopsis RhizosphereMGGHPFPDIPCKLCSKPVDLSVDLSADENGKAVHEECYIKHITSSRSEMNATMTAD*
Ga0187848_1019003623300017935PeatlandMGGHPFPEIFCTICNKTVDLSVDLNANESGKAVHEECYVEHITAAHRQPRLDSTPQS
Ga0187884_1038508123300018009PeatlandMGGHPFPEIPCTLCNKAVNLSADLYADENGKAVHEECYVKRITSSGANLATTMMAD
Ga0187889_1049936213300018023PeatlandMGGHPFPEIFCTICNKTVDLSVNLNANESGKAVHEECYVEHITAAHRQPRLDSTPQ
Ga0187871_1006667243300018042PeatlandMGGHPFPEIPCKLCAKAVDLTVDLSADENGKAVHEDCYVEHITSFLRDSSATMMTD
Ga0187871_1010564523300018042PeatlandMGGHPFPEIPCTLCNKAVDLSADLFADENGKAVHEECYVKRITSSGANLATTMMAD
Ga0187871_1013832523300018042PeatlandPEIPCKLCAKAVDLTVDLSADENGKAVHEDCYVEHITGSRRNPPTTMMTD
Ga0187871_1034152223300018042PeatlandMGGHLFSEIPCILCNKAVDLSADLYADENGKAVHEECYVKHITNSRSNVTASTMAGLS
Ga0184595_10609323300019166SoilMGGHPLPEIPCIFCRKPVDLEADLSADENGKAVHEECYVKQITDSLDNPLSTVMAN
Ga0182025_103245743300019786PermafrostMGGIHFQEVPCALCSTPVDLQVDLHADENGKAVHEDCYVKHLTTSPGTISPSNSPTDCQS
Ga0182025_107548043300019786PermafrostMGGHPFQEIPCIICNKAVDLSADLFADEDGKAVHEECYVKHITTSRSNPAVMAVD
Ga0193729_100917063300019887SoilMGGHPFQETSCTICAKPVDLTVDLCSDENGKAVHEDCYVKHVTSSRSNPLTTMMAD
Ga0193751_1000168193300019888SoilVGGHPFREIPCKICARPVDLTVDLHADEHGKAVHEDCYVKHIASSPNNPVAAIIAD
Ga0210407_1003993323300020579SoilMGGHPFPDIPCVLCSKPVDLSVDLSADEYGQAIHEECYVKRITSSRSKMNATIAAD
Ga0210407_1010885943300020579SoilMGGHPFTEIPCNICSKPVDLTLDLYADADGKAVHEECYVKHITSPHGHSPATVMMAD
Ga0210407_1054469923300020579SoilKEEFMGGHTFQEISCTICAEPVDLTVDLCSDENGKAVHEDCYVKHVTSSRSNPLTTVMAD
Ga0210403_1001004943300020580SoilMAGHTFPEIPCMLCSKPVDLTIDLAADENGKAVHEDCYVKRITSPRSNAPAAAIAD
Ga0210395_1081294313300020582SoilMGGHPFPEIPCTFCAKPVDLTVDLYADENGKAVHEDCYVKHVKSSRTNFPATMMAD
Ga0210401_1030733933300020583SoilMGGHPSTEIPCNICSKPVDLTLDVYADADGKAVHEECYVKHITSPHGHPPATVMMAD
Ga0215015_1090490033300021046SoilMGGHTFPEIPCTICAKPVDLIVELCADEHGKAVHEDCYVKHVTSSRSNPPATVMANLSQHYGDA
Ga0210400_1042624113300021170SoilMGGHKLPEIPCALCNKAVDLSADLHADENGKAVHEDCYVKRVASSRSNLTGTMTAD
Ga0210396_1096169513300021180SoilGGIMGGHKLPEIPCALCNKAVDLSADLHADENGKAVHEDCYVKRVASSRSNLTGTMTAD
Ga0210393_1092030313300021401SoilMGNRHFPEISCTICSKPVDLTVDLYADENGKAVHEDCYVKQTTRSSDLSTAVIAA
Ga0210389_1034381213300021404SoilMGGHKLPEIPCALCNKAVDLSADLHADENGKAVHEDCYVKRVASSRSNLNGTMTAD
Ga0210394_1010757643300021420SoilMGGHPIPEIPCTICSKPVDLTVDLCADEHGKSIHEDCYVKHITSSRSDVLATMMAD
Ga0210391_1003863783300021433SoilRPKEAFMGGHPFPEIPCTFCAKPVDLTVDLYADENGKAVHEDCYVKHVKSSRTNFPATMMAD
Ga0210398_1000704443300021477SoilMGGHPFPEIPCTFCAKPVDLTVDLYADENGKAVHEDCYVKHVKSSRPNFPATMIAD
Ga0210402_1110995923300021478SoilMGGHPFPDIPCQLCRKPVDLSADLSADENGKAVHHECYVKHITSSPSEMNATIAAD
Ga0224546_100164233300022515SoilMGGHPFQEIPCVLCNKPVDLSADLHADENGKAVHEECYVENITGSLSRITATMAADQVNCCEEEIGI
Ga0212123_1000232153300022557Iron-Sulfur Acid SpringMGGHSFPEIPCTICAEPVDLTVDVYADENGKAIHEDCYVQHLTSSHSNPPAPMMAD
Ga0212123_1002336663300022557Iron-Sulfur Acid SpringMGGHTPEIPCTICAKPVDLSTEMCADEHGKAVHEDCYVKHVTSSRSNPPATVIAD
Ga0212123_1009778523300022557Iron-Sulfur Acid SpringVGGHPFTEIPCKICAKPVDLSVDLHADEHGKAVHEDCYVKLIASSPSNTVAAIIAD
Ga0224569_10116413300022732RhizosphereCIFCRKPVDLEADLSADENGKAVHEECYVKQITDSLDNPLYTVMAN
Ga0224571_10034623300022734RhizosphereMGGHPLPEIPCIFCRKPVDLEADLSADENGKAVHEECYVKQITDSLDNPLYTVMAN
Ga0224550_105892523300022873SoilMGGHPFQEIPCTVCRKPVDLTVDLSADENGKAVHEECYVKQFTSHREAPIMAE
Ga0228597_10635113300023012Plant LitterHPLPEIPCIFCRKPVDLEADLSADENGKAVHEECYVKQITDSLDNPLSTVMAN
Ga0224547_105229723300023255SoilMGGHPFSEIPCAICNKAVNLSADLTANENGKAVHEECYFKHITGFRSNIPAAVSIE
Ga0224572_106694623300024225RhizosphereMGGHPLPEIPCIFCRKPVDLEADLSADENGKAVHEECYVKQITDSLDNPLYTV
Ga0247679_107702813300024251SoilMGGHPFPDIPCKLCSKPVDLSVDLSADENGKAVHEECYVKHITTSRSEMNATMTAD
Ga0207699_1026499013300025906Corn, Switchgrass And Miscanthus RhizosphereMGGHPFPDIPCILCSKPVDLSADLSADENGKAVHEECYVKHITSSHSKVNGTAAAD
Ga0207707_1015518033300025912Corn RhizosphereMGGHPFPDIPCKLCSKPVDLSADFSADENGKAVHEECYVQHITTSRSNVTPTITAD
Ga0207700_1035292823300025928Corn, Switchgrass And Miscanthus RhizosphereMGGHPFPDIPCKLCSKPVDLSVDLSADENGKAVHEVCYVKHITSSRSEMNATMTAD
Ga0207665_1039441233300025939Corn, Switchgrass And Miscanthus RhizosphereMGGHPFPDIPCTLCGKPVDLSADLSADETGKAVHEECYVKHITSSRGNMTATMDAD
Ga0209871_100899433300026217Permafrost SoilMGGHIPEIPCTICAKPVDLSIEMCADEHGKAVHEDCYVKHVTSSRSNPPATVMAD
Ga0209871_106778823300026217Permafrost SoilMGGHPFSEIPCAICSKAVNLSADLTANENGKAVHEDCYVKHITSSRDSTPATMAAD
Ga0209863_1022604113300026281Prmafrost SoilMGGHPFPDIPCKLCSKPVDLSVDLSADENGKAVHQECYVEHITSSRSNMTATVAAD
Ga0209839_1003008913300026294SoilMGGHTPEIPCTICAKPVDLSIEMCADEHGKAVHEDCYVKHVTSSRSNPLATVMAD
Ga0209010_100675323300027370Forest SoilMGGHPFSEIPCAICNKAVNLSADLTADENGKAVHEECYVNQITSSHRNNSATVAAD
Ga0209010_105925213300027370Forest SoilMGGHPFPEIPCVICSKPLDLRVDLSADENGKAVHEHCYLNRIIGYRSTLVATAIVD
Ga0209332_101173633300027439Forest SoilMGGHPFPEIPCTICAKPLDLTVDLYADEDGKALHEDCYVKNIASSRRNPSDRMIAD
Ga0209221_109142413300027609Forest SoilMGGHTYPEIPCTICNKAVDLSVDLTANENGKSVHEECYVNHITTSRSNTLATMAAD
Ga0209422_103740723300027629Forest SoilMGGHLFSEIPCAICSKAVNLSADLTADENGKAVHEDCYVKHITSSRDSTPATMAAD
Ga0209217_101927023300027651Forest SoilMGGHTFPEIPCTICAKPVDLSVELCADEHGKAVHEDCYVKHVTSSRSNPPATVMANLSQHYGDA
Ga0209217_120967513300027651Forest SoilMGGHPFQEIPCKLCAKPVDLTVDLSADENGKAVHEDCYVKHVASSRRNPPAAMMAD
Ga0209333_101069543300027676Forest SoilMGGHPFPEIPCKLCAKAVDLTVDLSADENGKAVHEDCYVEHIAGSRRNLSTTMMTD
Ga0209166_10000989133300027857Surface SoilMGGHPFPDIPCKLCSKPVDLSADLSADENGKAVHEECYVKQITSSRSNMTAIMSAD
Ga0209166_1001394793300027857Surface SoilMGGHSFREIPCKLCGKPVDLSVDLAADENGKAVHEECYVKHITSSRTEMNATMTAD
Ga0209166_1016910523300027857Surface SoilMGGHPFPDIPCALCSKRIDLSADLCADENGKAVHEECYVKHITSSRRETNATHGCRVD
Ga0209167_1023991123300027867Surface SoilMGGHPFPDIPCNLCSKPVDLSVDLSADENGKAVHEDCYVKHIKSFRREMNATMTAD
Ga0209579_100000075423300027869Surface SoilMGGHPLSDIPCKLCSKPVDLSIDLSADENGNAVHEECYVKHITSSRSKTNATVTPD
Ga0209624_1000347963300027895Forest SoilMGGHPFQEIPCPICSKPVDLTVDLYADEDGKVVHEDCYVKHITRSKLPATMMFD
Ga0209624_1033836223300027895Forest SoilMGGQPFSEISCAICSKAVNLSVDLTADESGKAVHEECYVQHVTSSPRNIPGTVVAD
Ga0209624_1034825323300027895Forest SoilMGGHKLPEIPCALCNKAVDLSADLHADENGRAVHEDCYVKHVASSRSNLTGTMTAD
Ga0209624_1069652213300027895Forest SoilMGGHPFPDIPCQLCSKPLDLSADLSADENGKAVHEECYVKHITGSRSNMNACTDAD
Ga0209006_10000986123300027908Forest SoilMGGHPFPEIPCTICARPVDLAVDLYADENGKAVHEDCYFQRVSSSRRDLPATLIAD
Ga0209006_1002331573300027908Forest SoilMGGHPLPEIDCTICAKPVDLSMELCADEYGKAVHEDCYVKHITSFPNNPADSMTAD
Ga0209006_1017125023300027908Forest SoilMGSHLFPEIPCKICSRPVDLSIELCADENGKAVHEDCYVEHIARSLRNPPARIMAD
Ga0209006_1019920013300027908Forest SoilMGGHPFLEIPCTICAKPVDLTVDLYADENGKSVHEHCYVKYVTSSRRNSPVPVMAD
Ga0209168_10005415123300027986Surface SoilMGGHPFPEIPCKLCAKAVDLTVDLSADENGKAVHEDCYVEHITGSRRNPPTTMMTD
Ga0209168_1003788913300027986Surface SoilMGGHPLSDIPCKLCSKPVDLSIDLSADENGNAVHEECYVKHITSSRS
Ga0209168_1005411833300027986Surface SoilMGGHPFPEIPCKLCAKAVDLTVDLSADENGKAVHEDCYVEHIAGSRRNPSTTMMTD
Ga0209526_1007453923300028047Forest SoilMGGHPFPEIPCKICGKPVDLTVNLSADENGKAVHDDCYVKHVTSPRNNQPATMMAD
Ga0311340_1060612323300029943PalsaFMGGHPFPEIPCKLCAKAVDLTVDLSADENGKAVHEDCYVEHIAGSRRNPSTTMMTD
Ga0311339_1001184143300029999PalsaMGGHPFPEIPCKLCSKPVDLKVDLSADENGKSVHEDCYVKHLTRSPSGAPAMMVSD
Ga0311353_1083397523300030399PalsaMGGHPFSEIPCVICNKAVNLSADLTADENGKAVHEECYVKHVTSAHRNNSDAMAAD
Ga0311353_1153530423300030399PalsaMGGHPFSEIPCAICNKAVNLSADLTADENGKAVHEECYVNHVTGSHGSIPAAVVAD
Ga0311354_1109895113300030618PalsaEAFMGGHPFPEIPCKLCSKPVDLKVDLSADENGKSVHEDCYVKHLTRSPSGAPAMMVSD
Ga0265775_11320923300030762SoilEAFMGGHPFPEIPCTLCNKAVDLSADLFADENGKAVHEECYVKRITSSGANLATTMMAD
Ga0265756_11106113300030805SoilAFMGGHPFPEIPCKLCAKAVDLTVDLSADENGKAVHEDCYVEHIAGSRRNPSTTMMTD
Ga0074026_1087862713300031035SoilCILCNQTVNLSTDLTADENGKAVHAECYLKHITSSPRDTAATMVAN
Ga0265760_1031544613300031090SoilMGGHPFPEIPCKLCSKPVDLKVDLSADENGKSVHEDCYVKHLTRSPGSVPAMMVSD
Ga0302325_1310613213300031234PalsaMGGHPFPEIPCTICNKAVNLNADLSADENGKAVHEDCYVKHISRSRGSIPAPTATD
Ga0302326_1215997113300031525PalsaMGGHPFSEIPCVICNKAVNLSADLTADENGKAVHEECYVNHVTSSHRNNSDAMAAD
Ga0302326_1357108813300031525PalsaMGGHPFSEIPCTICNKAVNLSADLTADENGKAVHEDCYVKHITRSPSSIPATMVAD
Ga0307476_1064488423300031715Hardwood Forest SoilMGGHPFPYILCRLCSKPVDLSVDLSANENGKAVHEECYVKHITSSRSQMHDSVTAD
Ga0307478_1027882623300031823Hardwood Forest SoilMGGHTFPEVDCTICAKPVDLSMELCADEYGKAVHEDCYVKHITGFPNNPADSMTAD
Ga0307471_10131675923300032180Hardwood Forest SoilMGGHPFPDIPCVLCSKPVDLSVDLSADEYGQAIHEECYVKRITSSSSKMKATIAA
Ga0315741_1118200533300032739Forest SoilHPFQEIPCKICNKAVDLSADLTADENGKAVHEECYVKHVTSSRSNMGIAMAAD


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