Metagenome / Metatranscriptome Family F052789

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052789
Family Type	Metagenome / Metatranscriptome
Number of Sequences	142
Average Sequence Length	43 residues
Representative Sequence	VSNALGLLAFVVYVAAIVGAAAGVTWVVVRLTPSRKPDSSAGS
Number of Associated Samples	106
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.21 %
% of genes near scaffold ends (potentially truncated)	17.61 %
% of genes from short scaffolds (< 2000 bps)	77.46 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.831 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil (13.380 % of family members)
Environment Ontology (ENVO)	Unclassified (16.197 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.859 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.25% β-sheet: 0.00% Coil/Unstructured: 57.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF01262	AlaDh_PNT_C	40.14
PF05222	AlaDh_PNT_N	14.79
PF01676	Metalloenzyme	10.56
PF03129	HGTP_anticodon	2.11
PF14016	DUF4232	1.41
PF00117	GATase	1.41
PF00300	His_Phos_1	0.70
PF13411	MerR_1	0.70
PF11967	RecO_N	0.70
PF11755	DUF3311	0.70
PF01266	DAO	0.70
PF02518	HATPase_c	0.70
PF02581	TMP-TENI	0.70
PF02896	PEP-utilizers_C	0.70
PF02875	Mur_ligase_C	0.70
PF00664	ABC_membrane	0.70
PF01149	Fapy_DNA_glyco	0.70
PF04472	SepF	0.70
PF06831	H2TH	0.70
PF06418	CTP_synth_N	0.70
PF00293	NUDIX	0.70
PF06210	DUF1003	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG0124	Histidyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	2.11
COG0423	Glycyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	2.11
COG0441	Threonyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	2.11
COG0442	Prolyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	2.11
COG0266	Formamidopyrimidine-DNA glycosylase	Replication, recombination and repair [L]	1.41
COG0352	Thiamine monophosphate synthase	Coenzyme transport and metabolism [H]	0.70
COG0504	CTP synthase (UTP-ammonia lyase)	Nucleotide transport and metabolism [F]	0.70
COG1799	Cell division protein SepF/YlmF, interacts with FtsZ	Cell cycle control, cell division, chromosome partitioning [D]	0.70
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.83 %
Unclassified	root	N/A	28.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.83 %
Unclassified	root	N/A	28.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.83 %
Unclassified	root	N/A	28.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.17 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	16.20 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.11 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.17 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12.68 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.82 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2.11 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.17 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	6.34 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	2.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.70 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.17 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4.23 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.11 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.17 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	2.82 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.11 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.70 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.17 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples	2.82 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.11 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.70 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.17 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	2.82 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.11 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.70 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig59317	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
2170459013\|GO6OHWN01EBS4W	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
2189573002\|GZIGXIF01B9HWT	Not Available	503	Open in IMG/M
2189573002\|GZIGXIF02JSARS	Not Available	506	Open in IMG/M
3300000956\|JGI10216J12902_111462369	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300001535\|A3PFW1_10070113	All Organisms → cellular organisms → Bacteria	6415	Open in IMG/M
3300002568\|C688J35102_118990707	Not Available	622	Open in IMG/M
3300003321\|soilH1_10009801	All Organisms → cellular organisms → Bacteria	1677	Open in IMG/M
3300004479\|Ga0062595_100180855	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300004479\|Ga0062595_101135443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	687	Open in IMG/M
3300004479\|Ga0062595_102415168	Not Available	522	Open in IMG/M
3300004479\|Ga0062595_102478162	Not Available	517	Open in IMG/M
3300004479\|Ga0062595_102511385	Not Available	514	Open in IMG/M
3300005174\|Ga0066680_10201861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1257	Open in IMG/M
3300005176\|Ga0066679_10929307	Not Available	546	Open in IMG/M
3300005177\|Ga0066690_11022633	Not Available	518	Open in IMG/M
3300005178\|Ga0066688_10079477	All Organisms → cellular organisms → Bacteria	1966	Open in IMG/M
3300005178\|Ga0066688_10456541	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300005179\|Ga0066684_10028604	All Organisms → cellular organisms → Bacteria	3004	Open in IMG/M
3300005187\|Ga0066675_10167579	All Organisms → cellular organisms → Bacteria	1521	Open in IMG/M
3300005329\|Ga0070683_101245251	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300005332\|Ga0066388_100027827	All Organisms → cellular organisms → Bacteria	5206	Open in IMG/M
3300005332\|Ga0066388_100941848	All Organisms → cellular organisms → Bacteria	1436	Open in IMG/M
3300005332\|Ga0066388_103401965	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300005332\|Ga0066388_105780237	Not Available	626	Open in IMG/M
3300005332\|Ga0066388_106427324	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300005336\|Ga0070680_100326579	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300005337\|Ga0070682_100160082	All Organisms → cellular organisms → Bacteria	1554	Open in IMG/M
3300005434\|Ga0070709_10062209	All Organisms → cellular organisms → Bacteria	2379	Open in IMG/M
3300005435\|Ga0070714_100012820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	6699	Open in IMG/M
3300005436\|Ga0070713_102375354	Not Available	513	Open in IMG/M
3300005439\|Ga0070711_100644367	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	888	Open in IMG/M
3300005467\|Ga0070706_101197984	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300005524\|Ga0070737_10029470	All Organisms → cellular organisms → Bacteria	3461	Open in IMG/M
3300005529\|Ga0070741_10257263	All Organisms → cellular organisms → Bacteria	1660	Open in IMG/M
3300005529\|Ga0070741_11168290	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300005530\|Ga0070679_100102021	All Organisms → cellular organisms → Bacteria	2855	Open in IMG/M
3300005532\|Ga0070739_10000744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	56460	Open in IMG/M
3300005532\|Ga0070739_10004237	All Organisms → cellular organisms → Bacteria	17131	Open in IMG/M
3300005532\|Ga0070739_10007869	All Organisms → cellular organisms → Bacteria	11127	Open in IMG/M
3300005532\|Ga0070739_10173020	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300005537\|Ga0070730_10004153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12817	Open in IMG/M
3300005537\|Ga0070730_11037544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	510	Open in IMG/M
3300005538\|Ga0070731_10000267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	84996	Open in IMG/M
3300005569\|Ga0066705_10366267	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300005607\|Ga0070740_10308767	Not Available	631	Open in IMG/M
3300005615\|Ga0070702_101360078	Not Available	579	Open in IMG/M
3300005764\|Ga0066903_100052055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	5001	Open in IMG/M
3300005764\|Ga0066903_100109451	All Organisms → cellular organisms → Bacteria	3780	Open in IMG/M
3300005764\|Ga0066903_100442761	All Organisms → cellular organisms → Bacteria	2166	Open in IMG/M
3300005764\|Ga0066903_100638840	All Organisms → cellular organisms → Bacteria	1857	Open in IMG/M
3300005764\|Ga0066903_101279553	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300005764\|Ga0066903_101474814	All Organisms → cellular organisms → Bacteria	1283	Open in IMG/M
3300005764\|Ga0066903_101619831	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300005764\|Ga0066903_104580086	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300005764\|Ga0066903_106046726	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300005841\|Ga0068863_100447993	Not Available	1267	Open in IMG/M
3300005897\|Ga0075281_1024831	Not Available	854	Open in IMG/M
3300005904\|Ga0075280_10118564	Not Available	555	Open in IMG/M
3300006173\|Ga0070716_101261913	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300006806\|Ga0079220_11558243	Not Available	570	Open in IMG/M
3300006854\|Ga0075425_102571624	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300009093\|Ga0105240_10023103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	8234	Open in IMG/M
3300009176\|Ga0105242_12196743	Not Available	597	Open in IMG/M
3300010043\|Ga0126380_10340835	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300010152\|Ga0126318_10508831	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300010154\|Ga0127503_10291198	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300010154\|Ga0127503_10507691	Not Available	1411	Open in IMG/M
3300010154\|Ga0127503_11068245	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300010360\|Ga0126372_11645276	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300010362\|Ga0126377_10930916	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300010371\|Ga0134125_10481089	Not Available	1376	Open in IMG/M
3300010373\|Ga0134128_10035490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	5840	Open in IMG/M
3300010373\|Ga0134128_10742932	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300010373\|Ga0134128_12084813	Not Available	624	Open in IMG/M
3300010376\|Ga0126381_103219879	Not Available	645	Open in IMG/M
3300010396\|Ga0134126_10285001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1944	Open in IMG/M
3300010401\|Ga0134121_13214291	Not Available	505	Open in IMG/M
3300012200\|Ga0137382_10505270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	859	Open in IMG/M
3300012206\|Ga0137380_10208547	All Organisms → cellular organisms → Bacteria	1770	Open in IMG/M
3300012359\|Ga0137385_11001213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	689	Open in IMG/M
3300012971\|Ga0126369_13185765	Not Available	537	Open in IMG/M
3300013104\|Ga0157370_11520915	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300014497\|Ga0182008_10073708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1679	Open in IMG/M
3300017924\|Ga0187820_1177631	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300017930\|Ga0187825_10095495	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300017937\|Ga0187809_10156574	Not Available	791	Open in IMG/M
3300017947\|Ga0187785_10021887	All Organisms → cellular organisms → Bacteria	2268	Open in IMG/M
3300017959\|Ga0187779_10223764	Not Available	1184	Open in IMG/M
3300017994\|Ga0187822_10162622	Not Available	724	Open in IMG/M
3300018433\|Ga0066667_12054966	Not Available	527	Open in IMG/M
3300018468\|Ga0066662_10502952	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300018468\|Ga0066662_12441700	Not Available	550	Open in IMG/M
3300020069\|Ga0197907_11303687	All Organisms → cellular organisms → Bacteria	1969	Open in IMG/M
3300021478\|Ga0210402_10584378	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300021560\|Ga0126371_11917557	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	711	Open in IMG/M
3300025913\|Ga0207695_10390943	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300025913\|Ga0207695_11205650	Not Available	637	Open in IMG/M
3300025914\|Ga0207671_10608503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	871	Open in IMG/M
3300025915\|Ga0207693_10642589	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300025916\|Ga0207663_10464830	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	978	Open in IMG/M
3300025921\|Ga0207652_10079240	All Organisms → cellular organisms → Bacteria	2869	Open in IMG/M
3300025928\|Ga0207700_10754284	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300025928\|Ga0207700_11276304	Not Available	655	Open in IMG/M
3300025934\|Ga0207686_11622945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	534	Open in IMG/M
3300025988\|Ga0208141_1021355	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300025998\|Ga0208651_1027650	Not Available	507	Open in IMG/M
3300026078\|Ga0207702_11420397	Not Available	688	Open in IMG/M
3300026295\|Ga0209234_1142117	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300026301\|Ga0209238_1074039	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300026325\|Ga0209152_10099420	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300026331\|Ga0209267_1225338	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300026335\|Ga0209804_1131176	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300026523\|Ga0209808_1053936	All Organisms → cellular organisms → Bacteria	1822	Open in IMG/M
3300026547\|Ga0209156_10166695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1062	Open in IMG/M
3300026550\|Ga0209474_10133735	All Organisms → cellular organisms → Bacteria	1631	Open in IMG/M
3300027576\|Ga0209003_1023692	Not Available	1011	Open in IMG/M
3300027706\|Ga0209581_1004164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11825	Open in IMG/M
3300027706\|Ga0209581_1233777	Not Available	568	Open in IMG/M
3300027773\|Ga0209810_1000079	All Organisms → cellular organisms → Bacteria	291971	Open in IMG/M
3300027773\|Ga0209810_1002320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	23335	Open in IMG/M
3300027773\|Ga0209810_1005794	All Organisms → cellular organisms → Bacteria	11002	Open in IMG/M
3300027857\|Ga0209166_10001915	All Organisms → cellular organisms → Bacteria	16520	Open in IMG/M
3300027869\|Ga0209579_10000004	All Organisms → cellular organisms → Bacteria	890648	Open in IMG/M
3300027965\|Ga0209062_1324964	Not Available	509	Open in IMG/M
3300031341\|Ga0307418_1003967	All Organisms → cellular organisms → Bacteria	4578	Open in IMG/M
3300031367\|Ga0307440_1171611	Not Available	596	Open in IMG/M
3300031720\|Ga0307469_10325359	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300031779\|Ga0318566_10311783	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300031938\|Ga0308175_100000034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	112846	Open in IMG/M
3300031938\|Ga0308175_100028209	All Organisms → cellular organisms → Bacteria	4600	Open in IMG/M
3300031938\|Ga0308175_100199987	All Organisms → cellular organisms → Bacteria	1967	Open in IMG/M
3300031939\|Ga0308174_11594231	Not Available	560	Open in IMG/M
3300031996\|Ga0308176_10265206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1655	Open in IMG/M
3300032074\|Ga0308173_10206066	Not Available	1637	Open in IMG/M
3300032770\|Ga0335085_10003235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	28630	Open in IMG/M
3300032770\|Ga0335085_10405592	Not Available	1580	Open in IMG/M
3300032783\|Ga0335079_11686564	Not Available	620	Open in IMG/M
3300032805\|Ga0335078_10125836	All Organisms → cellular organisms → Bacteria	3661	Open in IMG/M
3300032892\|Ga0335081_10188577	All Organisms → cellular organisms → Bacteria	2874	Open in IMG/M
3300032898\|Ga0335072_10041999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	6241	Open in IMG/M
3300033803\|Ga0314862_0015214	All Organisms → cellular organisms → Bacteria	1440	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.55%
Host-Associated	Host-Associated	7.75%
Engineered	Engineered	0.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.51%
Plants	Host-Associated → Plants	7.75%
Aquatic	Environmental → Aquatic	7.04%
Modeled	Engineered → Modeled	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.51%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.34%
Freshwater	Environmental → Aquatic → Freshwater	5.63%
Marine	Environmental → Aquatic → Marine	1.41%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.41%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.82%
Loam	Environmental → Terrestrial → Soil → Loam	22.54%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.34%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.82%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.82%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.41%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.41%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.06%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.34%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.93%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.23%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.82%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.11%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.41%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.70%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.70%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	13.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.04%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.23%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.52%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.52%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.82%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.82%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.11%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	1.41%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	1.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.41%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.41%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.70%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.70%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.70%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.70%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.70%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.70%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.70%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2170459013	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cm	Environmental	Open in IMG/M
2189573002	Grass soil microbial communities from Rothamsted Park, UK - FE1 (NaCl 30g/L 5ml)	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005524	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005897	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_103	Environmental	Open in IMG/M
3300005904	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_404	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025988	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101 (SPAdes)	Environmental	Open in IMG/M
3300025998	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_204 (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027965	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300031341	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1602-20	Environmental	Open in IMG/M
3300031367	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1604-10	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033803	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0317.00003560	2166559005	Simulated	VSNVLGLIGFVAYIVAIVGLAAAVTWVVVRFTPSRKQDGSAKPS
N57_01275200	2170459013	Grass Soil	VSNALGLIGFVAYIVAIVGLAAAVTWVVVRFTPSRKQDGSAKPS
FE1_06858330	2189573002	Grass Soil	VSNVLGLIGFVAYIVAIVGLAAAVTWVVVRFTPSRKQDG
FE1_06244920	2189573002	Grass Soil	LGLIGFVAYIVAIVGLAAAVTWVVVRFTPSRKQDGSAKPS
JGI10216J12902_1114623692	3300000956	Soil	VSNVLGLLAFVLYVVVIIGTAAGVTWIVVRLTPSRKSSGGSAQS*
A3PFW1_100701135	3300001535	Permafrost	MSTALGLIAFVGYVLAIVGAAASVTWVVVRLTPSRKPKPDS*
C688J35102_1189907072	3300002568	Soil	VSNALGLLAFVCFVVAIVGVAAGVTWVVVRLTPSRKPDSSADS*
soilH1_100098013	3300003321	Sugarcane Root And Bulk Soil	VSNALGLLAFVGYVIVIVGFAAGMTWLVVRLTPSRKPDESARS*
Ga0062595_1001808552	3300004479	Soil	MPWAPGYSREPVSNALGLIEFVAYVVAIVGLAAGITWVVVRITPSRKPDSSAES*
Ga0062595_1011354431	3300004479	Soil	FAMSTALGLLAFVVFIVAIIAVAAGVTWVVVRLSPSKKPDSPQPAA*
Ga0062595_1024151681	3300004479	Soil	VSTVLGLLAFVVYVLVIVGVAAGVTWLVVRLTPTRKPDGPAQS*
Ga0062595_1024781621	3300004479	Soil	WAPGYSREPVSNALGLLAFAGYVVAIIGAAAGITWVVVRLTPSRKSDSSASS*
Ga0062595_1025113852	3300004479	Soil	STALGLLAFAAYVVVIIGVAAAVTWAVVRLTPSRDSKSSAGS*
Ga0066680_102018612	3300005174	Soil	VSNALGLLAFVVYVLAIVGAAAGVTWLVVRLTPSRKPDSSPPS*
Ga0066679_109293071	3300005176	Soil	VSNALGLIEFAAYVLVIVGLAAGITWAVVRLTPSRKPNGPAQS*
Ga0066690_110226331	3300005177	Soil	NALGLLAFVVYVLAIVGAAAGVTWLVVRLTPSRKPDSSPPS*
Ga0066688_100794772	3300005178	Soil	VSTAFGLLAFAAYVVAIIGAAAGVTWVVVRLTPSRKSDSSARS*
Ga0066688_104565412	3300005178	Soil	VSNALGLIEFAAYVLVIVGLAAGITWAVVRLTPSRKPDGPAQS*
Ga0066684_100286043	3300005179	Soil	VSTAFGLLAFAAYVVAIIGAAAGVTWVVVRLTPTRKSDSSARS*
Ga0066675_101675792	3300005187	Soil	VSNALGLLAFVVFVVAIVGAAAGVTWAVVRLTPSRKPDSSADS*
Ga0070683_1012452512	3300005329	Corn Rhizosphere	VSNALGLIEFVAYILVIVGLAAGVTWVVVRYTPSRKQDGAAKS*
Ga0066388_1000278272	3300005332	Tropical Forest Soil	VSNALGLLAFVAYVVVIVGVAAAVTWVVVRLTPSRGKDGPAKS*
Ga0066388_1009418482	3300005332	Tropical Forest Soil	VSNVLGLLAFVAYVLVIVGMAAGVTWLVVRFTPSRKSDATSKS*
Ga0066388_1034019652	3300005332	Tropical Forest Soil	VSTALGLLAFVVYVVVIIGVAAAVTWAVVRLTPSRDSKGSAGS*
Ga0066388_1057802372	3300005332	Tropical Forest Soil	VSNVLGLIAFVAYVLVIVGLAAGVTWVVVRLTPSKSKPGGAAKS*
Ga0066388_1064273242	3300005332	Tropical Forest Soil	VSNVLGLIAFVGYVVAIIGIAAAVTWVVVRLTPPSKPGGSAQS*
Ga0070680_1003265792	3300005336	Corn Rhizosphere	VSNALGLLAFVVYVAAIVGAAAGVTWLVVRLTPSRKPDSSAGS*
Ga0070682_1001600822	3300005337	Corn Rhizosphere	VSNALGLLAFVVYVAAIVGAAAGVTWVVVRLKPSRKPDSSAGS*
Ga0070709_100622092	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VSTALGLIAFVGYVLVVVGAAAGVTWVVVRLTPSRKPGGESGS*
Ga0070714_1000128204	3300005435	Agricultural Soil	VSNVLGLLAFALYVVVIVGTAAGVTWLVVRLTPSRKPGGSTQNN*
Ga0070713_1023753542	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	WAPGYSREPVSNVLGLIEFVVYVAAIVGAAAGVTWLVVRLTPSRKPDSSAGS*
Ga0070711_1006443671	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSNALGLIAFVLYVVFIVGLAAAVTWLVVRFSPQKKPDGPART*
Ga0070706_1011979842	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VSNALGLIEFVAYILVIVGLAAGVTWVVVRYTPSRKQNGAAKS*
Ga0070737_100294703	3300005524	Surface Soil	VSTALGLLAFLAYVVAVIAVAAAVTWVVVRLTPAQKRNGSPRS*
Ga0070741_102572632	3300005529	Surface Soil	VSTALGLILFVVYALAVVGVAAGITWVVVRLSPGQKPGGAPKRSES*
Ga0070741_111682902	3300005529	Surface Soil	VSTALGLLAFIGYVVAVVAVAAGVTWVVVRLTPARKPGGAKPS*
Ga0070679_1001020211	3300005530	Corn Rhizosphere	VSNALGLLAFVVYVAAIVGAAAGVTWVVVRLTPSRKPDSSAGS*
Ga0070739_100007449	3300005532	Surface Soil	VSTALGLLAFVAYVLVIVGVAAAVTWIVVRVTPTHKPDGSAQS*
Ga0070739_1000423716	3300005532	Surface Soil	VSTALGLLAFVGYVLAIVGVAAGVTWVVVRLTPSRKPDSPAQS*
Ga0070739_100078694	3300005532	Surface Soil	VSTALDLLAFVGYALAVVGAAAGVTWVVVRVTPSKRPSQPAKR*
Ga0070739_101730202	3300005532	Surface Soil	VSTALGLLAFLGYVIAVVAVAAGVTWVVVRLTPAQKPERTARS*
Ga0070730_100041538	3300005537	Surface Soil	VSNALGLIAFVGYVVAVVGVAAAVTWIVVRVTPSRKPDGSAGS*
Ga0070730_110375442	3300005537	Surface Soil	VSNALGLLAFAAYVIVIVGAAAAITWIVVRFTPSQKRNG*
Ga0070731_100002673	3300005538	Surface Soil	VSTALGLLAFAAYALVVIGAAAAITWMVVKLTPPGRRPGS*
Ga0066705_103662672	3300005569	Soil	VSNALGLLEFVFFVVAIVGVAAGVTWVVVRLTPSRKPDSSADS*
Ga0070740_103087671	3300005607	Surface Soil	VSTALGLLAFVAYVIVVVAVAAGVTWVVVKLTPAQKPDRPARS*
Ga0070702_1013600782	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VSNALGLIEFVAYILVIVGLAAGVTWVVVRYTPSRKQDGA
Ga0066903_1000520552	3300005764	Tropical Forest Soil	VSSVLGLIAFVAYVVAIIGLAAGVTWIVVRLTPPSRKQDSKARS*
Ga0066903_1001094515	3300005764	Tropical Forest Soil	VSNVLGLLAFALYVAVIVGTAAGVTWVVVRLTPSKKPRSSAES*
Ga0066903_1004427612	3300005764	Tropical Forest Soil	VSNAFGLIEFVIYVALIVGLAAGVTWVVVRLTPSKSKPSGSPRS*
Ga0066903_1006388402	3300005764	Tropical Forest Soil	VSNVLGLLAFVAYVLVIVGLAAGVTWLVVRFTPSRKSDATSKS*
Ga0066903_1012795532	3300005764	Tropical Forest Soil	VSSVLGLIAFVVYVLAIVGLAAGITWVVVRLTPPSRKPKSQART*
Ga0066903_1014748142	3300005764	Tropical Forest Soil	MENVLGLLAFILYVLVIVGMAAGVTWIVVRFTPSRRKTDAAAKN*
Ga0066903_1016198312	3300005764	Tropical Forest Soil	MENVLGLLAFTLYVLVIVGMAAGVTWIVVRFTPSRRKADGAARN*
Ga0066903_1045800862	3300005764	Tropical Forest Soil	VSNVLGLLAFALYVVVIVGTAAGVTWLVVRLTPSRKPSGSTQNN*
Ga0066903_1060467262	3300005764	Tropical Forest Soil	VSTALGLIAFVAYVLVIVGLAAGVTWVVVRLTPRRKKPKPGSPAQS*
Ga0068863_1004479931	3300005841	Switchgrass Rhizosphere	VSNALGLIEFVAYILVIVGLAAGVTWVVVRYTPSRKQDGAAK
Ga0075281_10248311	3300005897	Rice Paddy Soil	MDSALGLLAFVVYLLAIVSVAAGVTWLVRVTPTKKPSQSSDGSAS*
Ga0075280_101185641	3300005904	Rice Paddy Soil	ALGLLAFVVYLLAIVSVAAGVTWLVVRVTPTKKPSQSSDGSAS*
Ga0070716_1012619132	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSNVLGLLGFALYVVVIVGTAAGVTWVVVRLTPSRKPGGSSQS*
Ga0079220_115582432	3300006806	Agricultural Soil	WTPMSTALGLLAFVVYVVVIIGVAAAVTWAVVRLTPSRDSKSSARS*
Ga0075425_1025716242	3300006854	Populus Rhizosphere	VSNALGLLAFVAYVIAIVGIAAAVTWVVVRLTPSRKPSGPTKS*
Ga0105240_100231038	3300009093	Corn Rhizosphere	MPWASGYSREPVSNALGLLAFVVYVAAIVGAAAGVTWLVVRLTPSRKPDSSAGS*
Ga0105242_121967431	3300009176	Miscanthus Rhizosphere	VSNALGLIEFVAYILVIVGLAAGVTWAVVRFTPSRKQDSSAKS*
Ga0126380_103408352	3300010043	Tropical Forest Soil	MSTVLGLIAFVAYVLVIVGLAAGVTWVVVRLTPTKKKPKPGSPAQS*
Ga0126318_105088312	3300010152	Soil	VSNALGLIEFVGYVAAIVGLAAGITWAVVRLTPSRKPDSPAQS*
Ga0127503_102911981	3300010154	Soil	VSNVLGLIAFVGYVVAIIGIAAGVTWLVVRLTPPSKPGGSAQS*
Ga0127503_105076912	3300010154	Soil	VSNVLGLIAFVAYIVAIIGIAAGVTWLVVRLIPPGKPRGSAQD*
Ga0127503_110682452	3300010154	Soil	LGLIAFVAYVLAIIGIAAGVTWLVVRLTPSKKPGGSAQS*
Ga0126372_116452762	3300010360	Tropical Forest Soil	VSNVLGLLAFVAYVLVIVGMAAGVTWLVVRFTPSRKSDAATKN*
Ga0126377_109309162	3300010362	Tropical Forest Soil	MENLLGLLAFILYVVVIVGMAAGVTWIVVRYTPSRKSNSAAKS*
Ga0134125_104810892	3300010371	Terrestrial Soil	VSNALGLLAFVAFVLVVVGAAAGVTWVVVRLTPSRKPGGDAPS*
Ga0134128_100354905	3300010373	Terrestrial Soil	MSTALGLIAFVGYVLAVVGVAAAVTWVVVRLTPTRKPSGQARS*
Ga0134128_107429322	3300010373	Terrestrial Soil	VSNVLGLIEFVVYVAGIVGAAAGVTWLVVRLTPSRKSGGSAQS*
Ga0134128_120848132	3300010373	Terrestrial Soil	VSNVFGLIEFVVYVAAIVGAAAGVTWLVVRLTPSRKPDGSARS*
Ga0126381_1032198791	3300010376	Tropical Forest Soil	VSTVLGLLAFVLYVVAIIGIAAAVTWVVVRLTPSRNQSGSARS*
Ga0134126_102850013	3300010396	Terrestrial Soil	FGLIEFVVYVAAIVGAAAGVTWLVVRLTPSRKPDGSAGS*
Ga0134121_132142912	3300010401	Terrestrial Soil	VSNVLGLLAFVGYVLAVVGVAAGVTWVVVRLTPSRKPDGTARS*
Ga0137382_105052701	3300012200	Vadose Zone Soil	VSNALGLIGFVAYIVAIVGLAAAVTWVVVRFTPSRKQDGSAES*
Ga0137380_102085471	3300012206	Vadose Zone Soil	REPVSNALGLLEFVFFVVAIVGAAAGVTWAVVRLTPKRKPDSSAGS*
Ga0137385_110012132	3300012359	Vadose Zone Soil	VSTAIGLIAFVGYVLAVVGVAAGMTWVVVRLTPGRKPDGSAKS*
Ga0126369_131857652	3300012971	Tropical Forest Soil	VSNVLGLLDFALYVVVIVGTAAGVTWLVVRLTPSRKPSGSTQNN*
Ga0157370_115209152	3300013104	Corn Rhizosphere	VSNALGLLEFVVYVAAIVGAAAGVTWLVVRLTPSRKPDSSAGS*
Ga0182008_100737081	3300014497	Rhizosphere	VSTALGLLAFVVYVLVIVGVAAAVTWVVVRVTPTRKSDEQARG*
Ga0187820_11776312	3300017924	Freshwater Sediment	VSTALGLLAFVGYVIAIVAVAAAVTWIVVRLTPNRKPDSSART
Ga0187825_100954952	3300017930	Freshwater Sediment	LSNALGLLAFVAYVLVIVGVAAAVTWIVVRLTPSRKSDSSART
Ga0187809_101565742	3300017937	Freshwater Sediment	SRYAVSTALGLLAFAGYVLVVVGLAAAVTWVVVRLTPSRKPGSSAG
Ga0187785_100218873	3300017947	Tropical Peatland	VSAALSLIAFAGYVLLIVGVAAGVTWIVVRLTPSRKPDGPAQQ
Ga0187779_102237641	3300017959	Tropical Peatland	VSTILGLLAFVAYVLVIVGLAAGVTWVVVRLTPSKRGGSGAAKS
Ga0187822_101626222	3300017994	Freshwater Sediment	VENLLGLLAFAAYVLVIVAMAAGLTWVVVRFTPSRKPDDAAKS
Ga0066667_120549662	3300018433	Grasslands Soil	VSNALGLLAFVVFVVAIVGAAAGVTWAVVRLTPSRKPDSSADS
Ga0066662_105029522	3300018468	Grasslands Soil	VSTAFGLLAFAAYVVAIIGAAAGVTWVVVRLTPSRKSDSSARS
Ga0066662_124417002	3300018468	Grasslands Soil	VSNVLGLLAFVLYVIVIVGTAAGVTWVVVRLTPSRKPDSSADG
Ga0197907_113036873	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	VSNALGLLAFVVYVAAIVGAAAGVTWLVVRLTPSRKPDSSAGS
Ga0210402_105843782	3300021478	Soil	VSTAFGLIEFILYVVLIVGLAAGVTWLVVRLTPSKSKPSGSARS
Ga0126371_119175572	3300021560	Tropical Forest Soil	VSNVLGLLAFVAYVLVIVGLAAGVTWLVVRFTPSRKSDATSKS
Ga0207695_103909431	3300025913	Corn Rhizosphere	SREPVSNALGLLAFVVYVAAIVGAAAGVTWLVVRLTPSRKPDSSAGS
Ga0207695_112056501	3300025913	Corn Rhizosphere	VSTALGLIAFVGYVLAIVGAAAAVTWVVVRLTPSRKS
Ga0207671_106085032	3300025914	Corn Rhizosphere	MPWASGYSREPVSNALGLLAFVVYVAAIVGAAAGVTWLVVRLTPSRKPDSSAGS
Ga0207693_106425892	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSNVLGLLGFALYVVVIVGTAAGVTWVVVRLTPSRKPGGSSQS
Ga0207663_104648302	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSNALGLIAFVLYVVFIVGLAAAVTWLVVRFSPQKKPDGPART
Ga0207652_100792405	3300025921	Corn Rhizosphere	VSNALGLLAFVVYVAAIVGAAAGVTWVVVRLTPSRKPDSSAGS
Ga0207700_107542842	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VSNVLGLLAFALYVVVIVGTAAGVTWLVVRLTPSRKPGGSTQNN
Ga0207700_112763042	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSNALGLIAFVVYVVFIVGLAAAVTWLVVRFSPQKKSDGPAQS
Ga0207686_116229452	3300025934	Miscanthus Rhizosphere	ALGLIGFVAYILVIVGLAAGVTWAVVRFTPSRKQDSSAKS
Ga0208141_10213551	3300025988	Rice Paddy Soil	VSTVLGLLAFVVYVLAVIGVAAGVTWIVVRLTPTRKPGGSA
Ga0208651_10276501	3300025998	Rice Paddy Soil	VSTVLGLLAFVVYVLAVIGVAAGVTWIVVRLTPTRKPGGSAQS
Ga0207702_114203972	3300026078	Corn Rhizosphere	VSNVLGLLAFVLYVVVIVGTAAGVTWLVVRLTPSRKPRDSAQS
Ga0209234_11421172	3300026295	Grasslands Soil	VSNALGLLEFVFFVVAIVGVAAGVTWVVVRLTPSRKPDSSADS
Ga0209238_10740392	3300026301	Grasslands Soil	LWRATLLAFVCFVVAIVGVAAGVTWVVVRLTPSRKPDTSADS
Ga0209152_100994202	3300026325	Soil	VSNALGLLAFVCFVVAIVGVAAGVTWVVVRLTPSRKPDSSADS
Ga0209267_12253382	3300026331	Soil	VSNALGLIEFAAYVLVIVGLAAGITWAVVRLTPSRKPDGPAQS
Ga0209804_11311762	3300026335	Soil	VSNALGLIEFAAYVLVIVGLAAGITWAVVRLTPSRKPNGPAQS
Ga0209808_10539363	3300026523	Soil	VSTAFGLLAFAAYVVAIIGAAAGVTWVVVRLTPTRKSDSSARS
Ga0209156_101666951	3300026547	Soil	LLAFAAYVVAIIGAAAGVTWVVVRLTPSRKSDSSARS
Ga0209474_101337352	3300026550	Soil	VSTALGLLAFVGYVIAIIAVAAAVTWMVVRLTPSRKPDSSPRT
Ga0209003_10236921	3300027576	Forest Soil	VSNALGLLFFVVYVLAIVGAAAGITWVVVRLTPSRKPDGPAKPS
Ga0209581_100416410	3300027706	Surface Soil	VSTALGLLAFLAYVVAVIAVAAAVTWVVVRLTPAQKRNGSPRS
Ga0209581_12337772	3300027706	Surface Soil	VSTALGLLAFVAYVIVVVAVAAGVTWVVVKLTPAQKPDRPARS
Ga0209810_1000079139	3300027773	Surface Soil	VSTALGLLAFVAYVLVIVGVAAAVTWIVVRVTPTHKPDGSAQS
Ga0209810_100232024	3300027773	Surface Soil	VSTALGLLAFVGYVLAIVGVAAGVTWVVVRLTPSRKPDSPAQS
Ga0209810_10057944	3300027773	Surface Soil	VSTALDLLAFVGYALAVVGAAAGVTWVVVRVTPSKRPSQPAKR
Ga0209166_100019158	3300027857	Surface Soil	VSNALGLIAFVGYVVAVVGVAAAVTWIVVRVTPSRKPDGSAGS
Ga0209579_10000004766	3300027869	Surface Soil	VSTALGLLAFAAYALVVIGAAAAITWMVVKLTPPGRRPGS
Ga0209062_13249641	3300027965	Surface Soil	VSTALGLLAFLAYVVAVIAVAAAVTWVVVRLTPAQKRNGSPRT
Ga0307418_10039675	3300031341	Salt Marsh	VSNVLGLLAFVAYVLAVVGAAAGVTWVVVRLTPPKKSGRPARN
Ga0307440_11716112	3300031367	Salt Marsh	TPVSNVLGLLAFVAYVLAVVGAAAGVTWVVVRLTPPKKSGRPARN
Ga0307469_103253592	3300031720	Hardwood Forest Soil	VSNVLGLIAFVGYVVAIIGIAAAVTWVVVRLTPPSKPGGSAQS
Ga0318566_103117832	3300031779	Soil	VSNVLGLIAFVGYVVAIIGIAAAVTWVVVRLTPPSKPGGPAQS
Ga0308175_100000034103	3300031938	Soil	VSTALGLLAFVVYVLAVVGVAAGVTWIVVRLTPTRKTGDSARS
Ga0308175_1000282096	3300031938	Soil	VSTALGLIAFVAYVLVIVGVAAGVTWVVVRLTPTRKSGGQARG
Ga0308175_1001999873	3300031938	Soil	PVSTALGLIAFVGYVLAVVGVAAAVTWVVVRLTPSRKPGGQARS
Ga0308174_115942312	3300031939	Soil	LSNAFGLIEFIIYVALIVGLAAGVTWVVVRLTPSKSKPSGSARS
Ga0308176_102652061	3300031996	Soil	LGLLAFVVFVLVVVGVAAGVTWVVVRLTPSRKPGGETQS
Ga0308173_102060663	3300032074	Soil	MSTALGLIAFVGYVLAVVGVAAAVTWVVVRLTPTRKPSGQARS
Ga0335085_1000323511	3300032770	Soil	MSTILGLLAFVAYVLVIVGLAAGVTWVVVRLTPSKRGGSGAAKS
Ga0335085_104055922	3300032770	Soil	VSAALSLLAFVGYVLLIVGVAAGVTWIVVRLTPSRKPDGPAQQ
Ga0335079_116865641	3300032783	Soil	GLLAFVAYVLVIVGLAAGVTWVVVRLTPSKRGGSGAAKS
Ga0335078_101258365	3300032805	Soil	VSNALGLIAFIGYALAVVGVAAGVTWVVVRVTPTRQANGPTKR
Ga0335081_101885772	3300032892	Soil	VSTALGLLAFLAYVVAVVGAAAAVTWVVVRVTPTRKS
Ga0335072_100419992	3300032898	Soil	VSNAFGLIEFVLYVLVIVGLAAGVTWVVVRLTPSKSKPSGSARN
Ga0314862_0015214_1157_1288	3300033803	Peatland	VSTVLSLLAFVGYVILIVGVAAGVTWIVVRLTPSRKPDGPAQQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052789

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences