Metagenome / Metatranscriptome Family F052755

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F052755
Family Type	Metagenome / Metatranscriptome
Number of Sequences	142
Average Sequence Length	53 residues
Representative Sequence	VNGMDRQLRDLLEAAAGEPPHRVTAEAVRRKVIRRRVVEFAAGAVAVAAIA
Number of Associated Samples	106
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	66.20 %
% of genes from short scaffolds (< 2000 bps)	63.38 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (63.380 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (49.296 % of family members)
Environment Ontology (ENVO)	Unclassified (60.563 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.63% β-sheet: 0.00% Coil/Unstructured: 49.37%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF08281	Sigma70_r4_2	93.66
PF13586	DDE_Tnp_1_2	0.70
PF13808	DDE_Tnp_1_assoc	0.70
PF13340	DUF4096	0.70
PF03473	MOSC	0.70
PF10604	Polyketide_cyc2	0.70
PF08450	SGL	0.70
PF05977	MFS_3	0.70
PF00440	TetR_N	0.70
PF04542	Sigma70_r2	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.70
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.70
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.70
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.70
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.70
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.70
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.38 %
Unclassified	root	N/A	36.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.38 %
Unclassified	root	N/A	36.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.38 %
Unclassified	root	N/A	36.62 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	62.68 %
Unclassified	root	N/A	36.62 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	59.86 %
Unclassified	root	N/A	36.62 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	52.11 %
Unclassified	root	N/A	36.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.62 %
Motilibacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales	32.39 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.41 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.70 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.62 %
Motilibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae	32.39 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.41 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.70 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.62 %
Motilibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter	32.39 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.41 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.70 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.62 %
Motilibacter deserti	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	32.39 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.41 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.70 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.70 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10283686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	900	Open in IMG/M
3300004633\|Ga0066395_10874095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	543	Open in IMG/M
3300005439\|Ga0070711_100203982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1527	Open in IMG/M
3300005439\|Ga0070711_100450339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	1054	Open in IMG/M
3300005471\|Ga0070698_100733642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	931	Open in IMG/M
3300005536\|Ga0070697_101910979	Not Available	531	Open in IMG/M
3300005764\|Ga0066903_102431856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	1013	Open in IMG/M
3300005764\|Ga0066903_102859956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	936	Open in IMG/M
3300005764\|Ga0066903_106359331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	616	Open in IMG/M
3300005764\|Ga0066903_108310043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	530	Open in IMG/M
3300009792\|Ga0126374_10379897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	980	Open in IMG/M
3300010046\|Ga0126384_11273975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	681	Open in IMG/M
3300010154\|Ga0127503_10539557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	668	Open in IMG/M
3300010361\|Ga0126378_11213282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	852	Open in IMG/M
3300010361\|Ga0126378_12276364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	618	Open in IMG/M
3300010361\|Ga0126378_12798315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	557	Open in IMG/M
3300010366\|Ga0126379_12531090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	611	Open in IMG/M
3300010398\|Ga0126383_12347056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	619	Open in IMG/M
3300010401\|Ga0134121_10116408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2254	Open in IMG/M
3300011270\|Ga0137391_10344639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	1280	Open in IMG/M
3300012356\|Ga0137371_10997923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	635	Open in IMG/M
3300012948\|Ga0126375_10822535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	738	Open in IMG/M
3300012971\|Ga0126369_10443767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1345	Open in IMG/M
3300012971\|Ga0126369_11614123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	738	Open in IMG/M
3300014657\|Ga0181522_10653188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	640	Open in IMG/M
3300016294\|Ga0182041_11980707	All Organisms → cellular organisms → Bacteria → Terrabacteria group	542	Open in IMG/M
3300016357\|Ga0182032_10951089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	732	Open in IMG/M
3300016357\|Ga0182032_11430412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	599	Open in IMG/M
3300016371\|Ga0182034_10998225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	723	Open in IMG/M
3300016445\|Ga0182038_12116119	All Organisms → cellular organisms → Bacteria → Terrabacteria group	510	Open in IMG/M
3300018001\|Ga0187815_10081237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	1362	Open in IMG/M
3300018058\|Ga0187766_10714407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	693	Open in IMG/M
3300021560\|Ga0126371_12503720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	625	Open in IMG/M
3300025928\|Ga0207700_10164702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1844	Open in IMG/M
3300027527\|Ga0209684_1035114	Not Available	768	Open in IMG/M
3300027680\|Ga0207826_1045340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	1221	Open in IMG/M
3300028828\|Ga0307312_10694991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	674	Open in IMG/M
3300030399\|Ga0311353_11313966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	592	Open in IMG/M
3300030707\|Ga0310038_10338479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	668	Open in IMG/M
3300031543\|Ga0318516_10128931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1446	Open in IMG/M
3300031543\|Ga0318516_10735231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	559	Open in IMG/M
3300031545\|Ga0318541_10041999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2318	Open in IMG/M
3300031564\|Ga0318573_10705714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	542	Open in IMG/M
3300031573\|Ga0310915_10282893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	1170	Open in IMG/M
3300031681\|Ga0318572_10128340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1453	Open in IMG/M
3300031713\|Ga0318496_10756923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	535	Open in IMG/M
3300031713\|Ga0318496_10849400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	503	Open in IMG/M
3300031719\|Ga0306917_11481025	All Organisms → cellular organisms → Bacteria → Terrabacteria group	522	Open in IMG/M
3300031720\|Ga0307469_12427736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	512	Open in IMG/M
3300031723\|Ga0318493_10600074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	614	Open in IMG/M
3300031724\|Ga0318500_10476934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	626	Open in IMG/M
3300031736\|Ga0318501_10262302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	916	Open in IMG/M
3300031740\|Ga0307468_102121631	Not Available	542	Open in IMG/M
3300031751\|Ga0318494_10229917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	1061	Open in IMG/M
3300031751\|Ga0318494_10557366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	669	Open in IMG/M
3300031764\|Ga0318535_10509976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	534	Open in IMG/M
3300031765\|Ga0318554_10062138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2060	Open in IMG/M
3300031765\|Ga0318554_10089541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1723	Open in IMG/M
3300031770\|Ga0318521_10927630	Not Available	532	Open in IMG/M
3300031779\|Ga0318566_10314520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	775	Open in IMG/M
3300031782\|Ga0318552_10175707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	1080	Open in IMG/M
3300031782\|Ga0318552_10743758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	500	Open in IMG/M
3300031799\|Ga0318565_10453016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	621	Open in IMG/M
3300031805\|Ga0318497_10172728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	1189	Open in IMG/M
3300031831\|Ga0318564_10403659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	598	Open in IMG/M
3300031832\|Ga0318499_10011771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2869	Open in IMG/M
3300031835\|Ga0318517_10496800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	550	Open in IMG/M
3300031890\|Ga0306925_12046643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	538	Open in IMG/M
3300031893\|Ga0318536_10133782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1256	Open in IMG/M
3300031893\|Ga0318536_10552464	Not Available	577	Open in IMG/M
3300031896\|Ga0318551_10091934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	1604	Open in IMG/M
3300031896\|Ga0318551_10535319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	673	Open in IMG/M
3300031910\|Ga0306923_10035550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5404	Open in IMG/M
3300031912\|Ga0306921_10772471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1099	Open in IMG/M
3300031941\|Ga0310912_10827716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	714	Open in IMG/M
3300031941\|Ga0310912_11143556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	594	Open in IMG/M
3300031945\|Ga0310913_10768129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	680	Open in IMG/M
3300031947\|Ga0310909_11267029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	594	Open in IMG/M
3300031954\|Ga0306926_11830186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	688	Open in IMG/M
3300031962\|Ga0307479_10937769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	837	Open in IMG/M
3300031981\|Ga0318531_10136359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1095	Open in IMG/M
3300032001\|Ga0306922_10313150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1685	Open in IMG/M
3300032008\|Ga0318562_10513731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	694	Open in IMG/M
3300032043\|Ga0318556_10289345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	856	Open in IMG/M
3300032043\|Ga0318556_10616211	All Organisms → cellular organisms → Bacteria → Terrabacteria group	566	Open in IMG/M
3300032052\|Ga0318506_10250844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	784	Open in IMG/M
3300032060\|Ga0318505_10144546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1100	Open in IMG/M
3300032067\|Ga0318524_10286838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	850	Open in IMG/M
3300032089\|Ga0318525_10120272	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300032091\|Ga0318577_10094323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	1395	Open in IMG/M
3300032091\|Ga0318577_10451105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	614	Open in IMG/M
3300032091\|Ga0318577_10491546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	585	Open in IMG/M
3300032261\|Ga0306920_101373446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1013	Open in IMG/M
3300033289\|Ga0310914_10958886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	755	Open in IMG/M
3300033289\|Ga0310914_11057241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	712	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.59%
Host-Associated	Host-Associated	1.41%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.77%
Aquatic	Environmental → Aquatic	2.82%
Plants	Host-Associated → Plants	1.41%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.07%
Freshwater	Environmental → Aquatic → Freshwater	2.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.41%
Sediment	Environmental → Aquatic → Sediment	0.70%
Peat	Environmental → Terrestrial → Peat	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.58%
Loam	Environmental → Terrestrial → Soil → Loam	13.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.11%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.41%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	64.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.34%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.41%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.70%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.70%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.70%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	49.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.11%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.11%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.41%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.41%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.70%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.70%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.70%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.70%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.70%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.70%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.70%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.70%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001454	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20204J15135_10012251	3300001454	Arctic Peat Soil	VSETSRQLRDLLEAAVGEPPRTVTVQAVRRRVTRRR
JGIcombinedJ51221_100234254	3300003505	Forest Soil	VSEIDSQLRELLEQAVGEPPRHIAVPAVRRRVIRRRITDTAA
Ga0066395_102836861	3300004633	Tropical Forest Soil	VNGMDRQLRDLLQAAVGEPPHRVTAAAVRRRVIRRRVVELAAGAVAVAAIAAIIPVGIGA
Ga0066395_108740952	3300004633	Tropical Forest Soil	MNGIDRQLRNLLDAAVGEPPHRVSVAAVRRGVIRRRVMQCAAGVAAAAVIAVVVPA
Ga0070714_1001690011	3300005435	Agricultural Soil	MNGTDKRLRDLLGAAAGEPPHRISVDAVRRRVIRRRLIEGI
Ga0070711_1002039823	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MNGTDKRLRDLLGAAAGEPPHRISVDAVRRRVIRRRLIEGIAGTAAVALVAV
Ga0070711_1004503392	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VNGMDRQLRDLLDAAVGEPPHEVSAEEVRRRVTRRRVREAVGIPAAVAVLAAVGVMAAAG
Ga0070708_1004922553	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VNGMDRQLRDLLDAAVGEPPHQVSVEAVRRRVIRRRVTEFV
Ga0070698_1007336423	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VNGMDRQLRDLLQVAAGEPPHRVSVEAVRRRVIRRRAVEFTAGAVALAAIAVLIPVGIGA
Ga0070697_1019109792	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VNGMDRQLRDLLEAAVGEPPHQVTAAAVRRRVIRRRMVEYVGVAAVVIAALVLVGIGTLG
Ga0066903_1024318561	3300005764	Tropical Forest Soil	VNGTDGQLRDLLEAAVGEPPHRVSAAAVRRRVIRRRVVELAAGAVAVAA
Ga0066903_1028599563	3300005764	Tropical Forest Soil	VNGMDRQLRDLLEAAVGEPPRRVSVAAVRRRVIRRRVAEAVAVAVTVAVIAVIIPVGIG
Ga0066903_1063593312	3300005764	Tropical Forest Soil	VNGMDGQLRGLLEAAVGEPPHRVSAAAVRRRVIRRRVVELAAGAVAVAA
Ga0066903_1083100432	3300005764	Tropical Forest Soil	MDRQLRDLLEVAAGEPPHRVSVEAVRRRVVRRRALEWVAGAAAVTAIAAVVPLIPGA
Ga0070712_1003694213	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MNGIDKQLRDLLEAAAGEPPHRISVDAVRRRVIRRRL
Ga0074049_114455941	3300006580	Soil	VNGMDRQLRDLLEAAAGEPPHRVTAETVRRRVVRR
Ga0075426_104489233	3300006903	Populus Rhizosphere	VNGMDRHLRELLDVAVGEPPHRIRSEAVRRRVVRRRVVE
Ga0075423_131994181	3300009162	Populus Rhizosphere	MDTHLRELLDVAVGEPPHRIRSEAVRRRVVRRRVVEVAAGA
Ga0126374_103798972	3300009792	Tropical Forest Soil	VNEMDGRLRDLLDVAAGEPPHRVSVEAVRRRVVRRRALEWVAGAAAVTAIAVVVPLI
Ga0126384_112739751	3300010046	Tropical Forest Soil	MDGHLRELLEAAVGEPPRRVSADAVRRRVIRRRVVEVTAAAAAVVAIAVIIPIGA
Ga0127503_105395571	3300010154	Soil	MDGQLRDLLEDAAGEPPHRVSVEAVHRRVIRRRVAEFAAGAVAVAAIAALIPVGIGAL
Ga0126378_112132821	3300010361	Tropical Forest Soil	MDRQLRNLLAAAAGEPPHRISAESVRRRVIRRRVVEFAAGAAAVAVIAAIIPVGLGALGRERGPSGG
Ga0126378_122763641	3300010361	Tropical Forest Soil	MDRLRDLLQTAVGEPPHQVTAEAVRRRVIRRRVVEYVALAVAVAVIAAIIPAGIGILHRGPR
Ga0126378_127983151	3300010361	Tropical Forest Soil	MDRQLRDLLEVAAGEPPHRVSVEAVRRRVVRRRALEWVAGAAAVTAIA
Ga0126379_125310902	3300010366	Tropical Forest Soil	VHAIDRHLHDLLEAAVGEPPHRVTAETVRRRVIKRRVVECAAIAVAVAVIAAIIPVGLAALNLGPESPASIA
Ga0126381_1015808503	3300010376	Tropical Forest Soil	MDGQLRDLLEAAAGEPPHRVSVSAVHRRVIRRRVVE
Ga0126383_123470561	3300010398	Tropical Forest Soil	LRDLLETAVGEPPRRVTVKAVRHRVIRRRMLEAAGISAFAVVVAGIGVAAAFR
Ga0134121_101164084	3300010401	Terrestrial Soil	VTETDGHLRELLNAAVGEPPHQVSAEAVRRRVIRRRVVEFAAGAAAVALIAIIIPVG
Ga0126361_111658973	3300010876	Boreal Forest Soil	VSETSRQLRDLLEAAVGEPPRTVTVQAVRRRVTRRRIIESVAAG
Ga0137391_103446391	3300011270	Vadose Zone Soil	MDRQLRELLQAAVGEPPHRVSAEAVRRRVIRRRVVEFAAGAVAMAAIAVIIPVGIGALGRGPGR
Ga0137383_109378631	3300012199	Vadose Zone Soil	VNGIDRQLRDLLEAAAGEPPHRVTAEAVRRRAIRRRVAELI
Ga0137371_109979233	3300012356	Vadose Zone Soil	MDGQLRDLLDAAVGEPPRQVTVAAVRRRVIRRRVVEYVAVAAAVIAV
Ga0126375_108225351	3300012948	Tropical Forest Soil	VHAIDRHLHDLLEAAVGEPPHRVTAETVRRRVIKRRVVECAAIAVAVAVIAAIIPVGLAALNLRPEPPASIAM
Ga0126369_104437673	3300012971	Tropical Forest Soil	MDGQLRGLLEAAAGEPPHRVSVEAVRRRVIRRRVAEFTAGAVAVAAIAAIIPVGIGALGRAHAPQN
Ga0126369_116141231	3300012971	Tropical Forest Soil	MDRQLRDLLEAAAGEPPHRVTVEAVHRRVIRRRVAEFTAGAVAVAAIAAIIPVGIGA
Ga0181522_106531881	3300014657	Bog	MNGMDRQLRDLLQTAAGEPPRQVTAAAVRRRVKRRRVTEGIAGIAVAAAVIAVVPVVTGA
Ga0182041_113505511	3300016294	Soil	VNAMDGRLRDLLEAAAGEPPRRVSAEAVRRRVIKRRVVEAAAAAAA
Ga0182041_119807072	3300016294	Soil	VNGMDRHLHDLLEAAVGEPPHRVNAEAVRRRVIRRRVVEFAAAAAAVAAIAVIIPVGIGALGRA
Ga0182032_109510892	3300016357	Soil	VSGIDRQLRDLLEAAVGEPPHQVTAAAVRRRVIRRRMVEAVAGAVAVAVIAAI
Ga0182032_114304122	3300016357	Soil	VNGMDRHLRDLLEAAVGEPPRLVSAEAVRRRVIRRRVVEFAAAAAAVAVIAVIIPVGIGALG
Ga0182034_109982252	3300016371	Soil	MDRELRDLLDAAVGDPPHRVTVAAVRRRVARRRAREAAAGTVVAVAAITVALPLITQALG
Ga0182037_101434794	3300016404	Soil	VNGMDRQLRDLLDAAVGEPPHQVTVAAVRHRVIRRRVAEYAAVAAAV
Ga0182038_121161192	3300016445	Soil	VNGMDRHLRDLLQAAAGEPPHRISVEAVRRRVIRRRVVEFAGAAVAVAVIAVIVP
Ga0187777_112572431	3300017974	Tropical Peatland	VNGMDGHLRELLEAAVGEPPRRVSAEAVRRQVIRRRVVEVAAAAAAVVAIAVIIPVGIGALGRAHRPPGGGYPAGRTFTS
Ga0187815_100812371	3300018001	Freshwater Sediment	VNGMDGHLRDLLETAVGEPPRRVSAEAVRRRVIRRRVVEYLAAAAAVAVIAVLIPVGIGALGRAPGPSTSHARARTFT
Ga0187766_107144072	3300018058	Tropical Peatland	VNGMDGHLRELLEAAVGEPPRRVSAEAVRRRVIRRRVVEVAAAAAAVVAIAVMI
Ga0210399_114476932	3300020581	Soil	MDEMNRRLRDLLDAAAGEPPHRISVAAVRRRVIRRRVAEYAAGAA
Ga0210397_102209781	3300021403	Soil	VTGTDRRLRDLLEAATGEPPHQVSAEAVRGRVSRRRAREYLAGAAAAAVIAAGVPLGI
Ga0210398_110644141	3300021477	Soil	VSGTNRQLRDLLEAAAGEPPRTVTVQAVRRRVTRRRIIESVAAAIVAV
Ga0126371_125037202	3300021560	Tropical Forest Soil	VNGMDRQLRDLLQAAVDEPPHRVSAEAVRRRVIRRRVAEFAAGAVAVAAIAALIPVGIGALGRAHTPRNTGPA
Ga0207700_101647024	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VNGMDGQLRDLLEAAAGEPPHRVSVEAVRRRVIRRRVA
Ga0207664_118863752	3300025929	Agricultural Soil	MNGIDKQLRDLLEAAAGEPPHRISVDAVRRRVIRRRLTEGMAGI
Ga0209684_10351142	3300027527	Tropical Forest Soil	VNGMDGQLRDLLEAAAGEPPHRVSAEAVRRKVIRRRVVEYVTAATAAAAIAVIIPVGIGALGRGPGRSKNA
Ga0209115_11104142	3300027567	Forest Soil	VSETSRQLRDLLEAAVGEPPRTVTVQAVRRRVTRRRIIESVAAAIVA
Ga0207826_10453403	3300027680	Tropical Forest Soil	VNGMDRHLRDLLEAAVGEPPRQVTVAAVRRRVIRRRVVEAVAGAVAGAVAVAVIAA
Ga0209068_105792631	3300027894	Watersheds	VNGMDGRLRDLLDAAVGEPPHQVTAAAVRRRVIRRRVVEAVAG
Ga0307312_106949912	3300028828	Soil	VTEMDRHLRELLNAAVGEPPHQVSAEAVRRRVIRRRVVEFAAGAAAVAVIA
Ga0311353_113139662	3300030399	Palsa	MNGMDRQLRDLLQTAAGEPPRQVTAAAVRRRVKRRRVTEGIAGIAVAAAVIAVVP
Ga0310038_103384792	3300030707	Peatlands Soil	MSGMDGQLRDLLDAAVGEPPHRVGVEAVRRRVVGRRVMEGIAGAAAVA
Ga0318516_100370094	3300031543	Soil	VNGMDRQLRDLLAAAAGDPPHRVSAAAVRRRVIRRRAAELAA
Ga0318516_101289311	3300031543	Soil	VNGTDGQLRDLLAAAAGEPPHRISAEAVHRRVIRRRVAEFAAGAV
Ga0318516_107352312	3300031543	Soil	VNGMDGHLRDLLEAAVGEPPRRVSADAVRRRVIRRRVVEFTAATAAVAVLAVII
Ga0318534_102511411	3300031544	Soil	VNETDRQLRDLLEAAVGEPPHQVSAEAVRRRVTWRRAVECI
Ga0318541_100419993	3300031545	Soil	MDGRLRDLLEVAAGEPPHRVSVEAVRRRVVRRRALEWVAGAAAVTAIAVVVPLIPGVFGH
Ga0318538_101484023	3300031546	Soil	VNETDRQLRDLLEAAVGEPPHQVSAEAVRRRVTWR
Ga0318573_107057141	3300031564	Soil	VNGMDRHLRDLLEAAVGEPPRLVSAEAVRRRVIRRRVVEFAAAAAAVA
Ga0310915_102828932	3300031573	Soil	VSEMDGRLRDLLEVAAGEPPHRVSVEAVRRRVVRRRALEWVAGAAAVTAIAAVVPLI
Ga0318555_106162671	3300031640	Soil	VNGMDGHLRELLEAAVGEPPHRVSVEAVRRRVIRRRVAEAVAVAV
Ga0318572_101283401	3300031681	Soil	VSGIDRQLRDLLEAAVGEPPHQVTAAAVRRRVIRRRMVEAVAGAVAVAVIAAIALAGVR
Ga0318496_107569232	3300031713	Soil	VNGTDGQLRDLLAAAAAEPPHRISAEAVHRRVIRRRVAEFAAGAVSM
Ga0318496_108494001	3300031713	Soil	VNGMDGHLRELLEAAVGEPPHRVSAEAVRRRVIRRRVVEFTAAAAAVVAIAIIIPVGVGA
Ga0306917_114810252	3300031719	Soil	VNGMDRQVRELLQAAAGEPPHRISAAAVRRRVIRRRVAEFTAAAAALAAI
Ga0307469_124277361	3300031720	Hardwood Forest Soil	MNGKDKQLRDLLEAAAGEPPHRISVDAVRRRVIRRRLTEGMAGIAAVALVAVAIPVA
Ga0318493_106000741	3300031723	Soil	MDAQLRDLLSAAVGDPPRRVTVEAVRRRVIRRRVAEAVAVAVTVAVIAVIVPVGIGALGRPSGP
Ga0318500_100277204	3300031724	Soil	VNGMDRQLRDLLEAAAGEPPHRISAEAVRRRVIRRRVVEFT
Ga0318500_104769342	3300031724	Soil	MTRMDGLDRRLRDLLEAAAGEPPRLFSVEAVRRRVIRRRVVELAAGAVAVAAIAAIIPVGIGAFV
Ga0318501_102623022	3300031736	Soil	VNGMDRHLHDLLEAAVGEPPHRVNAEAVRRRVIRRRVVEFAAAAAAVAAIA
Ga0307468_1021216312	3300031740	Hardwood Forest Soil	VTETDRHLRELLNAAVGEPPHQVSAEAVRRRVIRRRVVEFAAGAAAVALIAIIIPVG
Ga0318494_102299173	3300031751	Soil	VNGMDRHLHDLLEAAVGEPPHRVNAEAVRRRVIRRRVVEFAAAAAAVAAIAVIIPVGIGALGRAH
Ga0318494_105573661	3300031751	Soil	MTRMDGLDRRLRDLLGAAAGEPPRLFSVEAVRRRVIRRRVVELAAGAVAAAAIAAIIPVGIGAFGHAT
Ga0318535_102157102	3300031764	Soil	VNGMDRQVRELLQAAAGEPPHRISAAAVRRRVIRRRAA
Ga0318535_105099761	3300031764	Soil	MTRMDGLDRRLRDLLEAAAGEPPRLFSVEAVRRRVIRRRVVELAAGAVAVAAIAAIIPVG
Ga0318554_100621381	3300031765	Soil	VNGMDRQLRDLLDAAVGEPPHQVTVAAVRHRVIRRRVAEYAAVAAAVIAVLVLVGIGTLG
Ga0318554_100895411	3300031765	Soil	VNGMDRHLHDLLEAAVGEPPHRVNAEAVRRRVIRRRVVEFAAAAAAVAAIAVIIPVGIGALGRAHQPPGG
Ga0318521_109276301	3300031770	Soil	VNGMDGHLRELLEAAVGEPPHRVSVEAVRRRVIRRRVAEAVAVAVTVAVIAVIVPVGIGALGR
Ga0318546_103836802	3300031771	Soil	VNGMDGPLRDLLEAAAGEPPHRVTAEAVRRKVIRRRVVEFAAGAVAVAAIA
Ga0318546_104400961	3300031771	Soil	VSGMDEPLRDLLEAAVGDPPHRVNVEAVRRRVVRRRVIEGIAGAAAVAV
Ga0318566_103145202	3300031779	Soil	MDGRLRDLLEVAAGEPPHRVSVEAVRRRVVRRRALEWVAGAAAVTAIAA
Ga0318552_101757072	3300031782	Soil	VSGIDRQLRDLLEAAVGEPPHQVTAAAVRRRVIRRRMVEAVAGAVAVAVIAAIALA
Ga0318552_107437582	3300031782	Soil	VSEMDGRLRDLLEVAAGEPPHRVSVEAVRRRVVRRRALEWVAGAAAVTAIAAVVPLIP
Ga0318565_101350853	3300031799	Soil	MTRMDGLDRRLRDLLEAAAGEPPRLFSVEAVRRRVIRRR
Ga0318565_104530162	3300031799	Soil	VNGMDRQLRDLLAAAAGDPPHRVSAAAVRRRVIRRRVAELAAGAVAV
Ga0318497_101727282	3300031805	Soil	MTRMDGLDRRLRDLLEAAAGEPPRLFSVEAVRRRVIQRRVVELAAGAVAAAAIAAIIPVGIGAFGHATG
Ga0318564_104036591	3300031831	Soil	VNGMDRQLRDLLEAAAGEPPHRVTAEAVRRKVIRRRVVEFAAGAVAVAAIA
Ga0318499_100117711	3300031832	Soil	MDGRLRDLLEVAAGEPPHRVSVEAVRRRVVRRRALEWVAGAAAVTAIAAVVPLI
Ga0318517_104968001	3300031835	Soil	VNGMDRHLRDLLQATAGEPPHRISAEAVRRRVIRRRVVEFTAAAAAVAVIAVIIPVGIGALGRAHGRPN
Ga0306919_101612263	3300031879	Soil	VNGMDGQLRDLLAAAAGEPPHRISAEAVHRRVIRRRVAEFAA
Ga0306925_120466431	3300031890	Soil	VNGMDGHLRELLEAAVGEPPHRVSAEAVRRRVIRRRVVEFTAAAAAVVAIAIIIPVGVGALGRGPGPSISHAR
Ga0306925_122848291	3300031890	Soil	VNGMDRHLRDLLQATAGEPPHRISAEAVRRRVIRRRVVEFT
Ga0318536_101337823	3300031893	Soil	VNGTDGQLRDLLAAAAAEPPHRISAEAVHRRVIRRRVAEFAAGAVSVAAL
Ga0318536_105524642	3300031893	Soil	VNGMDRHLHDLLEAAVGEPPHRVNAEAVRRRVIRRRVVEFAAAAAAVAAIAVIIPVGIGALGRAHQPPGGGYAAGRIVTS
Ga0318551_100919341	3300031896	Soil	VNGMDRHLRDLLEAAVGEPPRQVTVAAVRRRVIRRRVVEYTAVAAAVIAVLV
Ga0318551_105353191	3300031896	Soil	VNGMDRHLRDLLEAAVGEPPRLVSAEAVRRRVIRRRVVEFAAAATAAAVIAVIIPVGIGALGRA
Ga0306923_100355501	3300031910	Soil	VNGTDGQLRDLLAAAAAEPPHRISAEAVHRRVIRRRVAEFAAGAVSVA
Ga0306921_107724711	3300031912	Soil	VNGMDGHLRELLEAAVGEPLHRVSAEAVRRRVIRRRVVEFTAAAAAVVA
Ga0310912_108277162	3300031941	Soil	VNGMDGPLRDLLEAAAGEPPHRVTAEAVRRKVIRRRVVEFAAGAVAVAAIAVIIPLGIGALGRGPGRSTNVATPQIFT
Ga0310912_111435561	3300031941	Soil	VNGMDGRLRDLLEAAVGEPPRRVSAGAVRRRVIRRRAVQYAAAAVAVI
Ga0310916_109277531	3300031942	Soil	VNGMDKHLRDLLEAAVGEPPRQVTVAAVRRRVIRRRVVQYTAVAA
Ga0310913_107681292	3300031945	Soil	VNGMDGHLRELLEAAVGEPPHRVSVEAVRRRVIRRRVAEAVAVAVTVAVIAVIVPVGIGALGRPSGP
Ga0310913_108510262	3300031945	Soil	VSGIDRQLRDLLEAAVGEPPHQVTAAAVRRRVIRRRMVEAV
Ga0310909_112670292	3300031947	Soil	VNGMDGHLRDLLEAAVGEPPRRVSAEAVRRRVVRRRVVEFAAAAVAVAVIAVVIPVGIGA
Ga0306926_101899661	3300031954	Soil	VNGMDGQLRDLLAAAAGDPPHRISAAAVRRRVIRRR
Ga0306926_105017964	3300031954	Soil	VNGMDGRLRDLLEAAVGEPPRRVSAGAVRRRVIRRRVVEFTA
Ga0306926_118205132	3300031954	Soil	VNAMDGRLRDLLEAAAGEPPRRVSAEAVRRRVIKRRVVEA
Ga0306926_118301861	3300031954	Soil	VNGMDRQLRDLLQAAVGEPPHRVTAVAVRRRVIRRRVGELAAGAVAVAAIAAIIPVGIGAFGHVPGPTS
Ga0318530_101464192	3300031959	Soil	MTRMDGLDRRLRDLLEAAAGEPPRLFSVEAVRRRVIRR
Ga0307479_109377692	3300031962	Hardwood Forest Soil	VNGMDGRLRDLLGAAAGEPPRQVTAEAVRGRVIRRRVVEAVAGAVAVVVIAAMALVG
Ga0318531_101363593	3300031981	Soil	VNGMDRQLRDLLDAAVGEPPHQVTVAAVRHRVIRRRVAEYAAVAAAVIAVLVLV
Ga0306922_103131501	3300032001	Soil	VNGMDRQLRDLLDAGVGEPPHQVTVAAVRHRVIRRRVAGYAAVAAAVIAV
Ga0318562_105137312	3300032008	Soil	VNGMDRHLRDLLEAAVGEPPRLVSAEAVRRRVIRRRVVEFAAAAAAVAVIAVIIPV
Ga0318549_105671482	3300032041	Soil	VSEMDRLRDLLQIAAGEPPHQVTAEAVRRRITRRRAVE
Ga0318556_102841981	3300032043	Soil	VNGMDRQLRDLLAAAAGDPPHRVSAAAVRRRVIRRRA
Ga0318556_102893451	3300032043	Soil	VNGMDRHLRDLLEAAVGEPPRLVSAEAVRRRVIRRRVVEFAAAAAAVAV
Ga0318556_106162112	3300032043	Soil	VNGMDRQLRDLLQAAVGEPPHRVTAVAVRRRVIRRRVGELAAGAVAVAAIAAIIPVGIGAFGHVPG
Ga0318506_101771702	3300032052	Soil	VSGIDRQLRDLLEAAVGEPPHQVTAAAVRRRVIRRRMVEA
Ga0318506_102508441	3300032052	Soil	VNGMDRHLRDLLQATAGEPPHRISAEAVRRRVIRRRVVEFTAAAAAVAVIAVIIPV
Ga0318570_101333212	3300032054	Soil	VNGTDGQLRDLLAAAAAEPPHRISAEAVHRRVIRR
Ga0318570_105311132	3300032054	Soil	MNGMDGLEGRLRGLLDAAAGEPPPDMLSVAAVRRRVIRRRALECVAGAAAAAVIA
Ga0318505_101445463	3300032060	Soil	VNGMDRQLRDLLDAAVGEPPHQVTVAAVRHRVIRRRVAEYAAVAAAVIAVLV
Ga0318510_101457572	3300032064	Soil	VSGIDRQLRDLLEAAVGEPPHQVTAAAVRRRVIRRRM
Ga0318514_100126046	3300032066	Soil	VNGMDRQLRDLLDAAVGEPPHQVTVAAVRHRVIRRRVAEYAAVAAYS
Ga0318524_102868381	3300032067	Soil	VNGMDRHLHDLLEAAVGEPPHRVNAEAVRRRVIRRRVVEFAAAAAAVAAIAVIIPVGIGALGRAHQP
Ga0318553_106662131	3300032068	Soil	VNGMDGHLRELLEAAVGEPPHRVSVEAVRRRVIRRRVAEA
Ga0318525_101124835	3300032089	Soil	VNGMDRHLHDLLEAAVGEPPHRVNAEAVRRRVIRRRV
Ga0318525_101202723	3300032089	Soil	VNGMDGPLRGLLEAAAGEPPHRVTAEAVRRKVIRRRVVEFAAGAVAVAAIAVIIPLGIGALGRGPGRSTNVATPQ
Ga0318577_100943231	3300032091	Soil	VSEMDGRLRDLLEVAAGEPPHRVSVEAVRRRVVRRRALEWVAGAAAVTAIAV
Ga0318577_104511051	3300032091	Soil	VNGMDGPLRDLLEAAAGEPPHRVTAEAVRRKVIRRRVVEFAAGAVAVAAIAVIIPLGIGALGRGPGRSTNVATPQIF
Ga0318577_104915462	3300032091	Soil	VNGMDRHLRDLLEAAVGEPPRQVTVAAVRRRVIRRRVVEYTAVAAAVIAVLVLVSLG
Ga0306920_1013734463	3300032261	Soil	VNGMDGHLRELLEAAVGEPLHRVSAEAVRRRVIRRRVVEFTAAAAAVVAIAII
Ga0335073_109976171	3300033134	Soil	VNGMDGRLRDLLDAAVGEPPHQVTAAAVRRRVIRRRVVEAVAGAV
Ga0310914_109588861	3300033289	Soil	VNAMDGRLRDLLEAAAGEPPHRISAEAVRRRVIRRRVVEYVTAAVAVAAIAV
Ga0310914_110572411	3300033289	Soil	VNGMDRQLRDLLAAAAGDPPHRVSAAAVRRRVIRRRVAELAAGAVAVA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052755

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences