Metagenome Family F052752

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052752
Family Type	Metagenome
Number of Sequences	142
Average Sequence Length	52 residues
Representative Sequence	KIANELRNKRPEHFIDKLSLADVHASLERAADVLSTVKGSQARGRQRRR
Number of Associated Samples	98
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	7.80 %
% of genes near scaffold ends (potentially truncated)	92.25 %
% of genes from short scaffolds (< 2000 bps)	93.66 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (67.606 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (32.394 % of family members)
Environment Ontology (ENVO)	Unclassified (48.592 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.338 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.35% β-sheet: 0.00% Coil/Unstructured: 50.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF00149	Metallophos	1.41
PF04392	ABC_sub_bind	1.41
PF01527	HTH_Tnp_1	1.41
PF13229	Beta_helix	1.41
PF03401	TctC	0.70
PF00248	Aldo_ket_red	0.70
PF01381	HTH_3	0.70
PF00196	GerE	0.70
PF04352	ProQ	0.70
PF07045	DUF1330	0.70
PF00346	Complex1_49kDa	0.70
PF01722	BolA	0.70
PF03450	CO_deh_flav_C	0.70
PF13365	Trypsin_2	0.70
PF03466	LysR_substrate	0.70
PF04519	Bactofilin	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.41
COG0649	NADH:ubiquinone oxidoreductase 49 kD subunit (chain D)	Energy production and conversion [C]	0.70
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.70
COG3109	sRNA-binding protein ProQ	Signal transduction mechanisms [T]	0.70
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.70
COG3261	Ni,Fe-hydrogenase III large subunit	Energy production and conversion [C]	0.70
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.61 %
All Organisms	root	All Organisms	32.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.61 %
cellular organisms	root	All Organisms → cellular organisms	31.69 %
Viruses	superkingdom	All Organisms → Viruses	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.61 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.69 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.54 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.93 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.61 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.13 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.93 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.61 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	11.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.93 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.23 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.93 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.41 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	0.70 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.41 %
Sinorhizobium phage PBC5	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Sinorhizobium phage PBC5	0.70 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.93 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.70 %
Sinorhizobium phage PBC5	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Sinorhizobium phage PBC5	0.70 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.93 %
Bradyrhizobium sp. 200	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 200	0.70 %
Sinorhizobium phage PBC5	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Sinorhizobium phage PBC5	0.70 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_105286358	Not Available	753	Open in IMG/M
3300002917\|JGI25616J43925_10367492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300005186\|Ga0066676_10581559	Not Available	759	Open in IMG/M
3300005332\|Ga0066388_100359602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2102	Open in IMG/M
3300005332\|Ga0066388_104746421	Not Available	691	Open in IMG/M
3300005332\|Ga0066388_106142523	Not Available	606	Open in IMG/M
3300005471\|Ga0070698_101987538	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300005518\|Ga0070699_100986044	Not Available	772	Open in IMG/M
3300005575\|Ga0066702_10593868	Not Available	665	Open in IMG/M
3300005713\|Ga0066905_100339085	Not Available	1196	Open in IMG/M
3300005713\|Ga0066905_101946781	Not Available	545	Open in IMG/M
3300005764\|Ga0066903_100596721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1912	Open in IMG/M
3300005764\|Ga0066903_101248928	Not Available	1383	Open in IMG/M
3300005764\|Ga0066903_101578239	Not Available	1243	Open in IMG/M
3300005764\|Ga0066903_103326682	Not Available	868	Open in IMG/M
3300005764\|Ga0066903_106120956	Not Available	629	Open in IMG/M
3300005764\|Ga0066903_106815890	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300005937\|Ga0081455_10134875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1925	Open in IMG/M
3300006028\|Ga0070717_10250927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1563	Open in IMG/M
3300006175\|Ga0070712_100776750	Not Available	821	Open in IMG/M
3300009137\|Ga0066709_104138000	Not Available	528	Open in IMG/M
3300009162\|Ga0075423_11240124	Not Available	796	Open in IMG/M
3300009792\|Ga0126374_10262248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1135	Open in IMG/M
3300009792\|Ga0126374_11007420	Not Available	654	Open in IMG/M
3300010043\|Ga0126380_12198168	Not Available	510	Open in IMG/M
3300010046\|Ga0126384_10296041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1328	Open in IMG/M
3300010047\|Ga0126382_10493346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	982	Open in IMG/M
3300010047\|Ga0126382_10797294	Not Available	805	Open in IMG/M
3300010048\|Ga0126373_11895926	Not Available	659	Open in IMG/M
3300010333\|Ga0134080_10178260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	912	Open in IMG/M
3300010358\|Ga0126370_11121139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	726	Open in IMG/M
3300010359\|Ga0126376_12552219	Not Available	559	Open in IMG/M
3300010360\|Ga0126372_10748042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	961	Open in IMG/M
3300010360\|Ga0126372_12278174	Not Available	591	Open in IMG/M
3300010360\|Ga0126372_12738522	Not Available	545	Open in IMG/M
3300010366\|Ga0126379_11017635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	933	Open in IMG/M
3300010366\|Ga0126379_12326818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300010366\|Ga0126379_12841753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	579	Open in IMG/M
3300010376\|Ga0126381_101390851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1014	Open in IMG/M
3300010376\|Ga0126381_103470418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	619	Open in IMG/M
3300010376\|Ga0126381_103790422	Not Available	591	Open in IMG/M
3300010398\|Ga0126383_10655538	All Organisms → cellular organisms → Bacteria → Proteobacteria	1125	Open in IMG/M
3300010863\|Ga0124850_1001392	All Organisms → cellular organisms → Bacteria	6639	Open in IMG/M
3300010863\|Ga0124850_1004353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4371	Open in IMG/M
3300010868\|Ga0124844_1065785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1322	Open in IMG/M
3300012200\|Ga0137382_11030785	Not Available	590	Open in IMG/M
3300012202\|Ga0137363_11820198	Not Available	502	Open in IMG/M
3300012208\|Ga0137376_10168834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1887	Open in IMG/M
3300012208\|Ga0137376_11652615	Not Available	531	Open in IMG/M
3300012285\|Ga0137370_10885736	Not Available	552	Open in IMG/M
3300012353\|Ga0137367_10716591	Not Available	696	Open in IMG/M
3300012357\|Ga0137384_10642746	Not Available	864	Open in IMG/M
3300012360\|Ga0137375_10079294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3429	Open in IMG/M
3300012361\|Ga0137360_11559442	Not Available	565	Open in IMG/M
3300012582\|Ga0137358_10222139	Not Available	1287	Open in IMG/M
3300012927\|Ga0137416_10471092	Not Available	1077	Open in IMG/M
3300012948\|Ga0126375_10513867	Not Available	896	Open in IMG/M
3300012958\|Ga0164299_11492830	Not Available	527	Open in IMG/M
3300012961\|Ga0164302_10136808	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300012971\|Ga0126369_10326878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1546	Open in IMG/M
3300012971\|Ga0126369_11423095	Not Available	783	Open in IMG/M
3300016270\|Ga0182036_10554704	Not Available	916	Open in IMG/M
3300016270\|Ga0182036_10860525	Not Available	741	Open in IMG/M
3300016294\|Ga0182041_10082691	Not Available	2301	Open in IMG/M
3300016294\|Ga0182041_10217325	Not Available	1534	Open in IMG/M
3300016294\|Ga0182041_10562901	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300016319\|Ga0182033_11806415	Not Available	555	Open in IMG/M
3300016319\|Ga0182033_11976365	Not Available	531	Open in IMG/M
3300016341\|Ga0182035_10266442	Not Available	1390	Open in IMG/M
3300016341\|Ga0182035_10679226	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300016341\|Ga0182035_10920992	Not Available	772	Open in IMG/M
3300016341\|Ga0182035_11095366	Not Available	709	Open in IMG/M
3300016341\|Ga0182035_12166305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	504	Open in IMG/M
3300016357\|Ga0182032_10195229	Not Available	1536	Open in IMG/M
3300016371\|Ga0182034_11104631	All Organisms → cellular organisms → Bacteria → Proteobacteria	688	Open in IMG/M
3300016387\|Ga0182040_11707725	Not Available	538	Open in IMG/M
3300016404\|Ga0182037_10099200	Not Available	2092	Open in IMG/M
3300016445\|Ga0182038_10532807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1006	Open in IMG/M
3300016445\|Ga0182038_11045872	Not Available	724	Open in IMG/M
3300016445\|Ga0182038_11345975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	639	Open in IMG/M
3300016445\|Ga0182038_11553021	Not Available	595	Open in IMG/M
3300020579\|Ga0210407_10986420	Not Available	643	Open in IMG/M
3300021405\|Ga0210387_10927228	Not Available	765	Open in IMG/M
3300021478\|Ga0210402_10322042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1433	Open in IMG/M
3300021560\|Ga0126371_10662196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1192	Open in IMG/M
3300021560\|Ga0126371_12506979	Not Available	624	Open in IMG/M
3300021560\|Ga0126371_13440411	Not Available	534	Open in IMG/M
3300025929\|Ga0207664_10886960	Not Available	801	Open in IMG/M
3300025939\|Ga0207665_11358596	Not Available	566	Open in IMG/M
3300026550\|Ga0209474_10485300	Not Available	626	Open in IMG/M
3300027748\|Ga0209689_1099741	Not Available	1501	Open in IMG/M
3300027874\|Ga0209465_10169113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1088	Open in IMG/M
3300028878\|Ga0307278_10240447	Not Available	804	Open in IMG/M
3300031543\|Ga0318516_10880430	Not Available	504	Open in IMG/M
3300031546\|Ga0318538_10799813	Not Available	512	Open in IMG/M
3300031668\|Ga0318542_10144513	Not Available	1178	Open in IMG/M
3300031679\|Ga0318561_10128124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 200	1353	Open in IMG/M
3300031681\|Ga0318572_10737351	Not Available	586	Open in IMG/M
3300031682\|Ga0318560_10650508	Not Available	570	Open in IMG/M
3300031724\|Ga0318500_10307986	Not Available	777	Open in IMG/M
3300031736\|Ga0318501_10142025	Not Available	1230	Open in IMG/M
3300031736\|Ga0318501_10150730	Not Available	1196	Open in IMG/M
3300031736\|Ga0318501_10700662	Not Available	558	Open in IMG/M
3300031744\|Ga0306918_10324027	Not Available	1191	Open in IMG/M
3300031747\|Ga0318502_10175657	Not Available	1231	Open in IMG/M
3300031747\|Ga0318502_10217380	Not Available	1109	Open in IMG/M
3300031747\|Ga0318502_10254940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1025	Open in IMG/M
3300031747\|Ga0318502_10567282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300031751\|Ga0318494_10867338	Not Available	529	Open in IMG/M
3300031770\|Ga0318521_10504253	Not Available	727	Open in IMG/M
3300031771\|Ga0318546_10572802	Not Available	794	Open in IMG/M
3300031771\|Ga0318546_11191408	Not Available	535	Open in IMG/M
3300031781\|Ga0318547_10199140	Not Available	1195	Open in IMG/M
3300031781\|Ga0318547_10224724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1127	Open in IMG/M
3300031793\|Ga0318548_10164491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1084	Open in IMG/M
3300031795\|Ga0318557_10579473	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300031796\|Ga0318576_10039326	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Sinorhizobium phage PBC5	2005	Open in IMG/M
3300031796\|Ga0318576_10535707	Not Available	552	Open in IMG/M
3300031797\|Ga0318550_10227231	Not Available	905	Open in IMG/M
3300031798\|Ga0318523_10501895	Not Available	600	Open in IMG/M
3300031859\|Ga0318527_10146166	Not Available	990	Open in IMG/M
3300031879\|Ga0306919_10839185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	705	Open in IMG/M
3300031912\|Ga0306921_10139668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2830	Open in IMG/M
3300031912\|Ga0306921_11244420	Not Available	826	Open in IMG/M
3300031942\|Ga0310916_10991156	Not Available	701	Open in IMG/M
3300031946\|Ga0310910_10718096	Not Available	789	Open in IMG/M
3300031981\|Ga0318531_10585943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300032010\|Ga0318569_10365944	Not Available	672	Open in IMG/M
3300032010\|Ga0318569_10412032	Not Available	630	Open in IMG/M
3300032025\|Ga0318507_10554246	Not Available	500	Open in IMG/M
3300032039\|Ga0318559_10432813	Not Available	614	Open in IMG/M
3300032042\|Ga0318545_10024040	All Organisms → cellular organisms → Bacteria	1959	Open in IMG/M
3300032042\|Ga0318545_10243666	Not Available	645	Open in IMG/M
3300032042\|Ga0318545_10267808	Not Available	614	Open in IMG/M
3300032051\|Ga0318532_10208249	Not Available	694	Open in IMG/M
3300032052\|Ga0318506_10155581	Not Available	1001	Open in IMG/M
3300032054\|Ga0318570_10439143	Not Available	595	Open in IMG/M
3300032063\|Ga0318504_10290494	Not Available	773	Open in IMG/M
3300032091\|Ga0318577_10345850	Not Available	711	Open in IMG/M
3300032261\|Ga0306920_100772219	Not Available	1412	Open in IMG/M
3300033289\|Ga0310914_11010151	Not Available	732	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.59%
Host-Associated	Host-Associated	1.41%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.59%
Plants	Host-Associated → Plants	1.41%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.80%
Loam	Environmental → Terrestrial → Soil → Loam	14.79%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	50.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.56%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.11%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.41%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.70%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1052863583	3300000955	Soil	LAAKIANELRNKRPEHFIDTSSLGDIHASLEHAADVLSTVKGSQAQGHQHHR*
JGI25616J43925_103674921	3300002917	Grasslands Soil	RALAAKIANELRNKRPEHFVDKLSLADVHASLEHAADVLGTVKGSQAHR*
Ga0066676_105815592	3300005186	Soil	ALNRCRALASKIANELRNKRPEHFVDKLPLACIHASLERAADVLSTVKGSHARGRQRRR*
Ga0066388_1003596024	3300005332	Tropical Forest Soil	LNRCRALASKIANELRNRRPEHFVDKLSLADVHASLERAADVLSTVKGSQARGHQRYR*
Ga0066388_1047464213	3300005332	Tropical Forest Soil	GIGATLNRCRALAAKIANELRNKRPEHFFDKLSLADVHASLERAADVLSTVGGSRARSDK
Ga0066388_1061425231	3300005332	Tropical Forest Soil	AALIRCRVLAAKIANELRNKRPEQSVDKLLLADIYASLEHVADLLGAVKGSQARGRQRRR
Ga0070698_1019875383	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LNRCRALAAKIANELRNKRPEHFVDKLSLADVHASLEHAADVLSTVKGGRGV*
Ga0070699_1009860441	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	CRVLAAKIANELRNKRPEHFVDKMSMADIRASLERAADVLSTVKGSQVRGRQRRR*
Ga0066702_105938681	3300005575	Soil	RNKRPEHFVDKLSLAEIHASLERAADVLTTVKGSPARGHQRHR*
Ga0066905_1003390851	3300005713	Tropical Forest Soil	KIANDLRNKSPEHFVDKLSLTDIHSSLERTADVLSTVKGSRAQAPHR*
Ga0066905_1019467811	3300005713	Tropical Forest Soil	NELRNKRPEHFVDKLSLADVHASLERAADVLSTVKGSQARGRQHRR*
Ga0066903_1005967215	3300005764	Tropical Forest Soil	LAAKIANELRNKRPEHFFDKLSLADVHASLERAADVLSTVGGSRARSDK*
Ga0066903_1012489283	3300005764	Tropical Forest Soil	AKIANELRNKRPEHFVDKLSMADIHASLERAADVLSRVKSSQARRRY*
Ga0066903_1015782395	3300005764	Tropical Forest Soil	ALNRCRALAAKIANELRNKRPEHFVDKLSMADIRACLERAAEVLTTVKGSPSRGRQRHR*
Ga0066903_1033266821	3300005764	Tropical Forest Soil	KAGIEAMLIRSRVLAVKIANELRNKRPEHFVDKLSLADVHSSLERAADVLSTVKGSQARGRQHRR*
Ga0066903_1061209561	3300005764	Tropical Forest Soil	LRNKRPEHFVDELSLADVHASLEHAADVLSTVKGSRALGRQRNR*
Ga0066903_1068158901	3300005764	Tropical Forest Soil	ASKIGNELRNKRPEHFVDKLSLADVHASLERAADVLSTVKGSQARGRQGHR*
Ga0081455_101348755	3300005937	Tabebuia Heterophylla Rhizosphere	VSRALAAKIANELRNKRPEHFLDKLSLADLHASLERAADVLSTVKGSEARGRQRHR*
Ga0070717_102509271	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	NELRNKRPEHFVDKSTLAEIRDALEFAADVLTTVKGSPARGHQRHR*
Ga0070712_1007767501	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GAALNRCRALAAKIANELRNKRPEYFVDKLLLADIQASLERTADVLSTVKGSQAGGRQRRR*
Ga0066709_1041380002	3300009137	Grasslands Soil	MGTALNRCRALATKIANELRNKRPEYFIGKLSLADVHASLERAADVLSTVKGSQARGRQRRR*
Ga0075423_112401242	3300009162	Populus Rhizosphere	RALGAKIANELRNKKPEHFIEKSSLAEIHSSLERAADVLGRVTRAQAQSSHRHR*
Ga0126374_102622481	3300009792	Tropical Forest Soil	RVLAAKIANELRNKRPEQFVDKLLLADIYASLEHVADVLGAVKGSQARGRQRRR*
Ga0126374_110074202	3300009792	Tropical Forest Soil	ALAAKIGNELRNKRPEHFFDKLSLADVHASLERAADVLSTVKGSRRPQRRR*
Ga0126380_121981681	3300010043	Tropical Forest Soil	IANELRNKKPEQFVDKLSLADLYASLEHAADVLSTVKGSQARGRQRRR*
Ga0126384_102960413	3300010046	Tropical Forest Soil	ALASKIGNELRNKRPEHFVDKLSLADVHASLERAADVLSTVKGSQARAVSATDS*
Ga0126382_104933461	3300010047	Tropical Forest Soil	NELRNKRPEHFVDKLSLADIHTSLERAADVLSTVKGSQARGRQRWR*
Ga0126382_107972942	3300010047	Tropical Forest Soil	AAKIANELRNKRPEHFVDRLSLADIHASLERAADVLTTVKSLPARGRPRDR*
Ga0126373_118959262	3300010048	Tropical Forest Soil	RNKRPEHFIDKLSLADVHASLERVADVLSTVKGSQAKRRQRRR*
Ga0134080_101782602	3300010333	Grasslands Soil	MGTALNRCRALATKIANELRNKRPEYFIGKLSLADVHASLERAADVLSTVKGSQARGRQRHR*
Ga0126370_111211393	3300010358	Tropical Forest Soil	IGATLNRCRALAAKIGNELRNKRPEHFVDKLSLADVHASLERAADVLSTVKGSQARHR*
Ga0126376_125522191	3300010359	Tropical Forest Soil	LAAKIANELRNKRPEHFVDTLSMADIHASLERAADVLSTVRGSQSRGRQRR*
Ga0126372_107480422	3300010360	Tropical Forest Soil	MLCRALAAKIANELRNKTPEHFADTLSMADIHCFLERTANILSAVEGSHARGRQRRRRSPFSGG*
Ga0126372_122781741	3300010360	Tropical Forest Soil	VLNRSRVLAAKIANELRNKRPEHFVDTLSMADIDASLERAADVLSTVRGSQSRGRQRR*
Ga0126372_127385221	3300010360	Tropical Forest Soil	AAKIANELRNKRPEHFFDKLSLTERAADVLSTVEGSRRPQRQRRSREGL*
Ga0126379_110176351	3300010366	Tropical Forest Soil	KRPEHFVDKLSLADVHASLERAADVLSTVKGSRARGSQRHR*
Ga0126379_123268181	3300010366	Tropical Forest Soil	RVLAAKIANELRNKRPEHFVDKLSLADIHASLERVADVLSTVKGSQTRGRQRRR*
Ga0126379_128417532	3300010366	Tropical Forest Soil	IANELRNKTPEHFANKLSMADIHCFLERTANILSAVEGSHARGRQRRR*
Ga0126381_1013908511	3300010376	Tropical Forest Soil	IANELRNKTPEHFANKLSMADMHCFLERTANILSAVEGSHARGRQRRR*
Ga0126381_1034704181	3300010376	Tropical Forest Soil	ELRNKRPEHFVDKLSLADVHASLERAADVLSTVKGSQARGHQRYR*
Ga0126381_1037904221	3300010376	Tropical Forest Soil	ATLIRCRVLAAKIANELRNKKPEQFVDKLSLADLYASLEHAADVLSTVKGSQARGRQRRR
Ga0126383_106555381	3300010398	Tropical Forest Soil	TLIRCRVLAAKIANELRNKRPEQFVDKLLLADIYASLEHVADVRGAVKGSQARGRQRRR*
Ga0124850_100139215	3300010863	Tropical Forest Soil	ELRKKKAEHFVDERSLADIHASLERAADVLSMMKGSPARGRQRRR*
Ga0124850_10043531	3300010863	Tropical Forest Soil	ASKIANELRNKTPEHFVDKLSLADVHASLERAADVLSTVKGS*
Ga0124844_10657851	3300010868	Tropical Forest Soil	RATLIRCRVLAAKIANELRNKRPEQFVDKLLLADIYASLEHVADVLGAVKGSQARGRQRRR*
Ga0137382_110307851	3300012200	Vadose Zone Soil	LAAKIANELRDKMPEHFVDKLSLADIHASLERAADVLSTFKVSQARGRQRR*
Ga0137363_118201981	3300012202	Vadose Zone Soil	NKRPEHFVDKLSLADVHASLERAADVLSTVKGSQVRGRQRRR*
Ga0137376_101688341	3300012208	Vadose Zone Soil	KRPEHFVDKLPLADIHTSLERAADVLTTVKGSQARGRQRHR*
Ga0137376_116526152	3300012208	Vadose Zone Soil	APFATKIGNELRDKRPEHFVDKLSLADIHASLERAADVLGTVKGSQARRR*
Ga0137370_108857361	3300012285	Vadose Zone Soil	EPEHFVDKLSLADVHGSLERAGDVLSTVKGSQVRDRQYHR*
Ga0137367_107165911	3300012353	Vadose Zone Soil	MLIRCRVLAVKIANELRNKKPEHFVELSLADIHASLEHAADVLSTVKGSRARGRQRRR*
Ga0137384_106427461	3300012357	Vadose Zone Soil	NELRNKTPEHFVDKLSMADIHASLERAADVLSTVKGSRARGRQRRR*
Ga0137375_100792948	3300012360	Vadose Zone Soil	ATKIANELRNKRPEHFIDKLSLADVHAPLERAADVLSTVKGSQARGRQRRR*
Ga0137360_115594421	3300012361	Vadose Zone Soil	KIANELRNKRPEHFIDKLSLADVHASLERAADVLSTVKGSQARGRQRRR*
Ga0137358_102221391	3300012582	Vadose Zone Soil	MSDGIGASLNRCRALATKIANELRDKRPEHFVDKLSLADIHASLERAADVLSTVKGSQTWGRQRRR*
Ga0137416_104710923	3300012927	Vadose Zone Soil	RPEHFVDKSTLAEIRDALEFAADVLTTVKGSPARGHQRHR*
Ga0126375_105138673	3300012948	Tropical Forest Soil	RNKRPEHFVDKLSLADIHTSLERAADVRSTVKCSQSRGRQRWR*
Ga0164299_114928301	3300012958	Soil	MSDGIGASLNRCRALATKIANELRDKRPEHFVDKLSLADIHASLERAADVLSTVKGSQTRGRQRRG*
Ga0164302_101368083	3300012961	Soil	FERFAGLPQNAAQNESELRNKGPEHFVDKLSLADFYASLERAADVLSTVRGSQARGRQRRR*
Ga0126369_103268783	3300012971	Tropical Forest Soil	CRALASKIANELRNKRPEHFVDKLSLADVHASLERAADVLSTVKGS*
Ga0126369_114230952	3300012971	Tropical Forest Soil	LAVKIANELRNKRPEHFVDKLSLADVHSSLERAADVLSTVKGSQARGRQHRR*
Ga0182036_105547043	3300016270	Soil	AAKIANELRNKRPEHFVDKLLLADIHASLEHAADVLSTVKGSQVQGRQRHR
Ga0182036_108605251	3300016270	Soil	ATLIRCRVLAAKIANELRNKKPEQFVDKLSLADIHTSLERAADVLSTVKGSQPRGRQRRR
Ga0182041_100826911	3300016294	Soil	NELRNKRPEHFIDKLSLADVHASLERAADVLSMVKGSRRPQRRR
Ga0182041_102173252	3300016294	Soil	RCRALAAKIANELRNKRPEHFVDRLSLADVHASLERAADVLSTVKGSQAQGRQQHR
Ga0182041_105629014	3300016294	Soil	RALAAKIANELRNKRPEHFFDKLSLADVHASLERAADVLSTVKGSRARDRQ
Ga0182033_118064151	3300016319	Soil	LAAKIANELRNKRPEHFFDKLSLADVHASLERAADVLSTVKGSRRPQRRR
Ga0182033_119763651	3300016319	Soil	AKIANGLRNKRPEQFVDKLLLADIYASLEHVADVLGAVKGSRARDRQRRRR
Ga0182035_102664421	3300016341	Soil	IANELRNKRPEHFVDRLSLADVHASLERAADVLSTVKGSQAQGRQQHR
Ga0182035_106792264	3300016341	Soil	LAAKIANELRNKRPEHFFDKLSLADVHASLERAADVLSTVKGSRARDRQ
Ga0182035_109209921	3300016341	Soil	NRCRALAAKIANELRNKRPEHFVDKLSLADIHASLERAADVLSTVKGSQARHR
Ga0182035_110953663	3300016341	Soil	ELPNKRPEHFFDKLSLADVHASLERAADVLSTVKGSRARDRQQHR
Ga0182035_121663051	3300016341	Soil	IGAALNRCRALATKIANELRNTRPAHFADKLSLADIHASLERAADALSTVKGSRPPTHTGMNG
Ga0182032_101952291	3300016357	Soil	NRCRALAAKIANELRNKRPEHFVDRLSLADVHASLERAADVLSTVKGSQAQGRQQHR
Ga0182034_111046311	3300016371	Soil	KIANELRNKRPEHFVDKLSLADIHASLERVAGILNTVKGSQARGRQRRR
Ga0182040_117077251	3300016387	Soil	LAAKIGNELRNKRPEHFIDKLLLADIHAPLERAADLLSTVKGSQARGRQRRR
Ga0182037_100992001	3300016404	Soil	KIANELRNKRPEHFIDKLSLADVHASLERAADVLSMVKGSRRPQRRR
Ga0182038_105328072	3300016445	Soil	ALIRCRVLAAKIANELRNKRPEQFVDKLLLADIYASVEHVADVLGAVKGSRARDRQRRRR
Ga0182038_110458721	3300016445	Soil	IANELRNKRPEHFFDKLSLADVHASLEHAADVLSTVKGSRARDRQQHR
Ga0182038_113459752	3300016445	Soil	VSAAKIANELPNKRPEHFFDKLSLADVHASLERAADVLSTVKGS
Ga0182038_115530211	3300016445	Soil	ALIRCRVLAAKIANELRNKRPEQFVDKLLLADIYASLEHLADVLGAVKGSQARGRQRRR
Ga0210407_109864201	3300020579	Soil	NELRNKTPEHFADKLSMADIHASLERAADVLSTVKGSQARGRQRR
Ga0210387_109272281	3300021405	Soil	MSDGIGASLNRCRALATKIANELRDKRPEHFVDKLLLADIHASLERAADVLSTVKGSQTRGRQRRG
Ga0210402_103220424	3300021478	Soil	CRALAVKIANELRNKRPEHFVDKSSLADVHASLEHAADVLSTVKGGRGV
Ga0126371_106621961	3300021560	Tropical Forest Soil	GIGTVLNRCRALASKIANELRNKRPEHFVDKLSLADVHASLERAADVLSTVKGS
Ga0126371_125069792	3300021560	Tropical Forest Soil	AELNRCRALAAKIANELRNKRPEHFVDKLTLADIHASLERAADVLSAVKGSRTRGRQRRR
Ga0126371_134404111	3300021560	Tropical Forest Soil	KIANELRNKRPEQFVDKLLLADIYASLEHVADVLGAVKGSQARGRQRRR
Ga0207664_108869601	3300025929	Agricultural Soil	GHDREDWHATKIANELRDKRPEHFVDKLSLADIHTSLERAADVLSTVKGSQARGRQRRR
Ga0207665_113585961	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	RCRALAAKIANELRIKTPEHFADKLSMADIHASLERAADVLSTVKGSQVRGRQRRR
Ga0209474_104853002	3300026550	Soil	NRCRALAAKIANELRNKRPEHFIDKVAMADIHASLERAADVLSTVKGSQARARQRRR
Ga0209689_10997413	3300027748	Soil	NELRNKRPEHFVDKLPLACIHASLERAADVLSTVKGSHARGRQRRR
Ga0209465_101691132	3300027874	Tropical Forest Soil	KIANELRNKRPEHFVDKLSMADIRACLERAADILTTVKGSPSRGRQRHR
Ga0307278_102404472	3300028878	Soil	AKIGNELRNKRPEHFVDKLSLADIHASLERAADVLSTVKGSQARGRQHHR
Ga0318516_108804301	3300031543	Soil	LAAKIANELRNKRPEQFVDKLLLADIYVSLEYVADVLGAVKGSQARGRQRRR
Ga0318538_107998131	3300031546	Soil	VLAAKIANELRNKRPEQFVDKLLLADIYASLEHVADVLGAVKGSQARGRQRRR
Ga0318542_101445131	3300031668	Soil	IGNELRNKRPEHFIDKLSLADVHASLERAADVLSTVKGSRAPGRQRHR
Ga0318561_101281243	3300031679	Soil	GVGAALNRCRALAAKIANELRNKRPEHFVDKLSMADIHACLERAADVLNTVKGSQARGRQRHG
Ga0318572_107373511	3300031681	Soil	IRAALIRCRVLAAKIANELRNKRPEQFVDKLLLADIYVSLEYVADVLGAVKGSQARGRQRRR
Ga0318560_106505081	3300031682	Soil	CRVLAVKIANELRNKRPEHFVDKLSLADIHASLERVAGILNTVKGSQARGRQRRR
Ga0318500_103079861	3300031724	Soil	IANGLRNKRPEHFVGKLSLADIHTSLERVADVLSTVKGSRAPGRQRHR
Ga0318501_101420251	3300031736	Soil	LNRCRALAAKIANELRNKRPEHFVDRLSLADVHASLERAADVLSTVKGSQAQGRQQHR
Ga0318501_101507301	3300031736	Soil	RCRALAAKIGNELRNKRPEHFIDKLSLADVHASLERAADVLSTVKGSRAPGRQRHR
Ga0318501_107006621	3300031736	Soil	IGTALNRRRALAAKIANELRNKRPEHFVDKLSLADVHTSLERAADVLSTVKGSRRPRRRR
Ga0306918_103240271	3300031744	Soil	NKRPEHFVDKLLLADIHASLEHAADVLSTVKGSQVQGRQRHR
Ga0318502_101756571	3300031747	Soil	PNKRPEHFFDKLSLADVHASLERAADVLSTVKGSRARDRQQHR
Ga0318502_102173802	3300031747	Soil	GTELNRCRALAAKIANELRNKRPEHFVDKLLLADIHASLEHAADVLSTVKGSQVQGRQRH
Ga0318502_102549403	3300031747	Soil	ALIRCRVLAAKIANELRNKRPEQFVDKLLLADIYASLEHVADVLGAVKGSQARGRQRRR
Ga0318502_105672821	3300031747	Soil	LYRCRVLVGRIGEELRKKKPEHFVDKLSLADINASLERAADVLSMMKGSQTRGRQRRG
Ga0318494_108673381	3300031751	Soil	LIRCRVLAAKIANELRNKRPEQFVDKLLLADIYVSLEYVADVLGAVKGSQARGRQRRR
Ga0318521_105042531	3300031770	Soil	ELRNKRPEHFVDRLSLADVHASLERAADVLSTVKGSQAQGRQQHR
Ga0318546_105728022	3300031771	Soil	TLIRCRVLAVKIANELRNKRPEHFVDKLSLADIHASLERVAGILNTVKGSQARGRQRRR
Ga0318546_111914081	3300031771	Soil	VSAAKIANELPNKRPEHFFDKLSLADVHASLERAADVLSTVKGSR
Ga0318547_101991403	3300031781	Soil	ELRNKRPEHFIDKLSLADVHASLERAADVLSTVKGSRAPGRQRHR
Ga0318547_102247241	3300031781	Soil	LRNKRPEQFVDKLLLADIYASLEHVADVLGAVKGSRARDRQRRRR
Ga0318548_101644914	3300031793	Soil	RPEHFFDKLSLADVHASLERAADVLSTVKGSRARDRQ
Ga0318557_105794731	3300031795	Soil	DRCRALAGRIGEELRKKKAEHFVDERSLADIHASLERAADVLSMMKGSPARGRQRRR
Ga0318576_100393261	3300031796	Soil	IRCRALAAKIANELRTKRPEHFVDKLSLADVHASLERAADVLSTVKGSQARGRQRHR
Ga0318576_105357071	3300031796	Soil	STLIRCRVLAAKIANGLRNKRPEHFVGKLSLADIHTSLERVADVLSTVKGSRAPGRQRHR
Ga0318550_102272311	3300031797	Soil	LAAKIANELRNKRPEHFVDKLSLADIHACLERAANVLSRVKGSQARARQRYR
Ga0318523_105018951	3300031798	Soil	NELPNKRPEHFFDKLSLADVHASLERAADVLSTVKGSRARDRQQHR
Ga0318527_101461661	3300031859	Soil	YRCRALAAKIANELRNKRPEHFFDKLSLADIHASLERAADALSRVKQRSR
Ga0306919_108391851	3300031879	Soil	ALATKIANELRNKRPEHFVDKLSLADVHASLERAADVLSTVNSSQAQGRQRYP
Ga0306921_101396683	3300031912	Soil	VEFAGTIEHFVDELSLADVHVSLEHAADVLSTVKGSRTLGRQRNR
Ga0306921_112444202	3300031912	Soil	IRAALIRCRVLAAKIANELRNKRPEQFVDKLLLADIYASLEHVADVLGAVKGSQARGRQRRR
Ga0310916_109911561	3300031942	Soil	LPNKRPEHFFDKLSLADVHASLERAADVLSTVKGSRARDRQQHR
Ga0310910_107180961	3300031946	Soil	AALNRCRALAAKIANELRNKRPEHFVDKLSLADIHASLERAADVLSTVKGSQARHR
Ga0318531_105859431	3300031981	Soil	LESTLYRCRALVGRIGEELRKKKPEHFVDKLSLADINASLERAADVLSMMKGSQTRGRQRRG
Ga0318569_103659441	3300032010	Soil	VLAAKIANGLRNKRPEQFVDKLLLADIYASLEHVADVLGAVKGSQARGRQRRR
Ga0318569_104120323	3300032010	Soil	IANELRNKRPEHFFDKLSLADVHASLERAADVLSTVKGSRARDRQ
Ga0318507_105542461	3300032025	Soil	FFDKLSLADVHASLERAADVLSTVKGSRARDRQQHR
Ga0318559_104328132	3300032039	Soil	EKAAIRAALIRCRVLAAKIANELRNKRPEQFVDKLLLADIYASLEHVADVLGAVKGSQARGRQRRR
Ga0318545_100240401	3300032042	Soil	GNELRNKRPKHFIDKLSLADVHASLERAADVLSTVKGSRRPRRRR
Ga0318545_102436662	3300032042	Soil	RNKRPEHFFDKLSLADVHASLERAADVLSTVKGSRARDRQQYR
Ga0318545_102678081	3300032042	Soil	CRVLAAKIANELRNKRPEHFVDKLSLADVHAFLERAADVLSTVKGSQARGRQRHRDNAGPPAPSR
Ga0318532_102082491	3300032051	Soil	NRCRALAAKIANELRNKRPEHFVDKLLLADIHASLEHAADVLSTVKGSQVQGRQRHR
Ga0318506_101555812	3300032052	Soil	RNKRPEHFIDKLSLADVHASLERAADVLSTVKGSRAPGRQRHR
Ga0318570_104391431	3300032054	Soil	AAKIANELRNKRPEHFVDKLSLADIHASLERAADVLSTVKGSQARHR
Ga0318504_102904941	3300032063	Soil	LIRCRVLAAKIANELRNKKPEQFVDKLSLADIHTSLERAADVLSTVKGSQPRGRQRRR
Ga0306924_115754792	3300032076	Soil	RPEHFVDKLTLADDHASLERAADVLSTVNSSQAQGRQRYP
Ga0318577_103458503	3300032091	Soil	IANELPNKRPEHFFDKLSLADVHASLERAADVLSTVKGSRARDRQQHR
Ga0306920_1007722193	3300032261	Soil	LNRCRALAAKIVNELRNKRPEHFVDKLSLADIHASLERAADVLSTVKGSQARHR
Ga0310914_110101513	3300033289	Soil	RALAAKIANELRNKRPEHFVDKLSLADIHASLERAADVLSTVKGSQARHR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F052752

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences