Metagenome / Metatranscriptome Family F052700

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052700
Family Type	Metagenome / Metatranscriptome
Number of Sequences	142
Average Sequence Length	67 residues
Representative Sequence	VKYFKITKTWSVKAESEEEAIKQVAADPGQYLESESVTRTEYKKPQQKAGGWKNGFKNQLLGQQ
Number of Associated Samples	74
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	76.06 %
% of genes near scaffold ends (potentially truncated)	24.65 %
% of genes from short scaffolds (< 2000 bps)	85.21 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (71.127 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (44.366 % of family members)
Environment Ontology (ENVO)	Unclassified (32.394 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (59.859 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.30% β-sheet: 18.48% Coil/Unstructured: 65.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF01555	N6_N4_Mtase	24.65
PF11171	DUF2958	14.79
PF01609	DDE_Tnp_1	1.41
PF07690	MFS_1	0.70
PF02534	T4SS-DNA_transf	0.70
PF13814	Replic_Relax	0.70
PF13482	RNase_H_2	0.70
PF14104	DUF4277	0.70
PF00899	ThiF	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG0863	DNA modification methylase	Replication, recombination and repair [L]	24.65
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	24.65
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	24.65
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	1.41
COG3293	Transposase	Mobilome: prophages, transposons [X]	1.41
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	1.41
COG5421	Transposase	Mobilome: prophages, transposons [X]	1.41
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	1.41
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	1.41
COG3505	Type IV secretory pathway, VirD4 component, TraG/TraD family ATPase	Intracellular trafficking, secretion, and vesicular transport [U]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.13 %
All Organisms	root	All Organisms	28.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.13 %
cellular organisms	root	All Organisms → cellular organisms	28.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.13 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	27.46 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.13 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.63 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	5.63 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.41 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	1.41 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.13 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	5.63 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4.93 %
candidate division Zixibacteria	phylum	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria	2.82 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	1.41 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.70 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.70 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.70 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.13 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	5.63 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	3.52 %
unclassified candidate division Zixibacteria	no rank	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria	2.82 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.41 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.70 %
Epsilonproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria	0.70 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.13 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	5.63 %
Sphaerobacteridae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae	3.52 %
candidate division Zixibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium	2.82 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.41 %
Aggregatilineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Aggregatilineales	0.70 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.70 %
Campylobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.13 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	5.63 %
Sphaerobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales	3.52 %
candidate division Zixibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium	2.82 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.41 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.70 %
Arcobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Arcobacteraceae	0.70 %
Aggregatilineaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Aggregatilineales → Aggregatilineaceae	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.13 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	5.63 %
Sphaerobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae	3.52 %
candidate division Zixibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium	2.82 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.41 %
Aliarcobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Arcobacteraceae → Aliarcobacter	0.70 %
Aggregatilinea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Aggregatilineales → Aggregatilineaceae → Aggregatilinea	0.70 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.13 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	5.63 %
Sphaerobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae	3.52 %
candidate division Zixibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium	2.82 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.41 %
Aggregatilinea lenta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Aggregatilineales → Aggregatilineaceae → Aggregatilinea → Aggregatilinea lenta	0.70 %
Aliarcobacter butzleri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Arcobacteraceae → Aliarcobacter → Aliarcobacter butzleri	0.70 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.13 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	5.63 %
Nitrolancea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea	3.52 %
candidate division Zixibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium	2.82 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.41 %
Aggregatilinea lenta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Aggregatilineales → Aggregatilineaceae → Aggregatilinea → Aggregatilinea lenta	0.70 %
Aliarcobacter butzleri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Arcobacteraceae → Aliarcobacter → Aliarcobacter butzleri	0.70 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.13 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	5.63 %
Nitrolancea hollandica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica	3.52 %
candidate division Zixibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium	2.82 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.41 %
Aggregatilinea lenta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Aggregatilineales → Aggregatilineaceae → Aggregatilinea → Aggregatilinea lenta	0.70 %
Aliarcobacter butzleri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Arcobacteraceae → Aliarcobacter → Aliarcobacter butzleri	0.70 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c1092527	Not Available	730	Open in IMG/M
3300000787\|JGI11643J11755_11777109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica	675	Open in IMG/M
3300000787\|JGI11643J11755_11786976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Aggregatilineales → Aggregatilineaceae → Aggregatilinea → Aggregatilinea lenta	520	Open in IMG/M
3300000858\|JGI10213J12805_10431767	Not Available	557	Open in IMG/M
3300000955\|JGI1027J12803_108112775	Not Available	648	Open in IMG/M
3300005179\|Ga0066684_10290107	Not Available	1084	Open in IMG/M
3300005184\|Ga0066671_10594775	Not Available	717	Open in IMG/M
3300005187\|Ga0066675_11098008	Not Available	594	Open in IMG/M
3300005289\|Ga0065704_10109998	Not Available	1990	Open in IMG/M
3300005289\|Ga0065704_10273441	Not Available	938	Open in IMG/M
3300005289\|Ga0065704_10766611	Not Available	512	Open in IMG/M
3300005294\|Ga0065705_10027274	Not Available	1215	Open in IMG/M
3300005294\|Ga0065705_10567057	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Arcobacteraceae → Aliarcobacter → Aliarcobacter butzleri	728	Open in IMG/M
3300005294\|Ga0065705_10809131	Not Available	607	Open in IMG/M
3300005294\|Ga0065705_11118855	Not Available	518	Open in IMG/M
3300005295\|Ga0065707_10004479	Not Available	4408	Open in IMG/M
3300005295\|Ga0065707_10154739	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1620	Open in IMG/M
3300005332\|Ga0066388_101266228	Not Available	1268	Open in IMG/M
3300005332\|Ga0066388_101581327	Not Available	1152	Open in IMG/M
3300005332\|Ga0066388_102583622	Not Available	925	Open in IMG/M
3300005332\|Ga0066388_105222296	Not Available	659	Open in IMG/M
3300005560\|Ga0066670_10833429	Not Available	560	Open in IMG/M
3300005562\|Ga0058697_10795903	Not Available	511	Open in IMG/M
3300005764\|Ga0066903_104148327	Not Available	776	Open in IMG/M
3300005764\|Ga0066903_105622816	Not Available	660	Open in IMG/M
3300005937\|Ga0081455_10621160	Not Available	701	Open in IMG/M
3300006034\|Ga0066656_11005819	Not Available	535	Open in IMG/M
3300006049\|Ga0075417_10002862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5327	Open in IMG/M
3300006049\|Ga0075417_10013345	All Organisms → cellular organisms → Bacteria	3115	Open in IMG/M
3300006049\|Ga0075417_10019200	Not Available	2701	Open in IMG/M
3300006049\|Ga0075417_10048689	Not Available	1823	Open in IMG/M
3300006049\|Ga0075417_10090066	Not Available	1380	Open in IMG/M
3300006049\|Ga0075417_10165806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica	1034	Open in IMG/M
3300006049\|Ga0075417_10287905	Not Available	795	Open in IMG/M
3300006049\|Ga0075417_10559909	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	579	Open in IMG/M
3300006058\|Ga0075432_10205157	Not Available	782	Open in IMG/M
3300006194\|Ga0075427_10006293	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1715	Open in IMG/M
3300006194\|Ga0075427_10006894	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium	1659	Open in IMG/M
3300006194\|Ga0075427_10039002	Not Available	796	Open in IMG/M
3300006844\|Ga0075428_100346503	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1595	Open in IMG/M
3300006844\|Ga0075428_100400794	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1470	Open in IMG/M
3300006844\|Ga0075428_101510048	Not Available	704	Open in IMG/M
3300006844\|Ga0075428_101699068	Not Available	659	Open in IMG/M
3300006844\|Ga0075428_101731096	Not Available	652	Open in IMG/M
3300006845\|Ga0075421_100106570	All Organisms → cellular organisms → Bacteria	3523	Open in IMG/M
3300006845\|Ga0075421_100270949	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	2074	Open in IMG/M
3300006845\|Ga0075421_101859934	Not Available	646	Open in IMG/M
3300006846\|Ga0075430_100457554	Not Available	1053	Open in IMG/M
3300006846\|Ga0075430_101798263	Not Available	502	Open in IMG/M
3300006846\|Ga0075430_101808873	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	501	Open in IMG/M
3300006847\|Ga0075431_100019609	All Organisms → cellular organisms → Bacteria	6898	Open in IMG/M
3300006847\|Ga0075431_100484705	Not Available	1229	Open in IMG/M
3300006847\|Ga0075431_100687241	Not Available	1002	Open in IMG/M
3300006847\|Ga0075431_100948708	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300006852\|Ga0075433_10158041	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	2017	Open in IMG/M
3300006871\|Ga0075434_100223941	Not Available	1901	Open in IMG/M
3300006871\|Ga0075434_102361822	Not Available	534	Open in IMG/M
3300006880\|Ga0075429_100003104	All Organisms → cellular organisms → Bacteria	14109	Open in IMG/M
3300006880\|Ga0075429_100009042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	8654	Open in IMG/M
3300006969\|Ga0075419_10344422	Not Available	1012	Open in IMG/M
3300006969\|Ga0075419_10730926	Not Available	704	Open in IMG/M
3300009094\|Ga0111539_10584097	Not Available	1301	Open in IMG/M
3300009094\|Ga0111539_12589034	Not Available	588	Open in IMG/M
3300009094\|Ga0111539_13510951	Not Available	503	Open in IMG/M
3300009100\|Ga0075418_10950544	Not Available	929	Open in IMG/M
3300009100\|Ga0075418_11694650	Not Available	687	Open in IMG/M
3300009147\|Ga0114129_10013120	Not Available	11802	Open in IMG/M
3300009147\|Ga0114129_10030749	All Organisms → cellular organisms → Bacteria	7594	Open in IMG/M
3300009147\|Ga0114129_10100773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3996	Open in IMG/M
3300009147\|Ga0114129_10406580	All Organisms → cellular organisms → Bacteria	1793	Open in IMG/M
3300009147\|Ga0114129_10953230	Not Available	1084	Open in IMG/M
3300009147\|Ga0114129_10996899	Not Available	1055	Open in IMG/M
3300009147\|Ga0114129_12529801	Not Available	613	Open in IMG/M
3300009147\|Ga0114129_13086258	Not Available	545	Open in IMG/M
3300009147\|Ga0114129_13456231	Not Available	506	Open in IMG/M
3300009156\|Ga0111538_10991414	Not Available	1063	Open in IMG/M
3300009162\|Ga0075423_10244658	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1879	Open in IMG/M
3300009162\|Ga0075423_11461500	Not Available	733	Open in IMG/M
3300010038\|Ga0126315_10379612	Not Available	885	Open in IMG/M
3300010038\|Ga0126315_10687665	Not Available	667	Open in IMG/M
3300010041\|Ga0126312_10471444	Not Available	897	Open in IMG/M
3300010041\|Ga0126312_10769684	Not Available	697	Open in IMG/M
3300010041\|Ga0126312_11129902	Not Available	576	Open in IMG/M
3300010042\|Ga0126314_10422817	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium	962	Open in IMG/M
3300010043\|Ga0126380_11226249	Not Available	648	Open in IMG/M
3300010043\|Ga0126380_12216090	All Organisms → cellular organisms → Bacteria → Proteobacteria	508	Open in IMG/M
3300010044\|Ga0126310_11273033	Not Available	593	Open in IMG/M
3300010145\|Ga0126321_1066574	Not Available	583	Open in IMG/M
3300010145\|Ga0126321_1264694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica	630	Open in IMG/M
3300010362\|Ga0126377_10700639	Not Available	1065	Open in IMG/M
3300011003\|Ga0138514_100137579	Not Available	541	Open in IMG/M
3300012198\|Ga0137364_11174678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica	576	Open in IMG/M
3300012212\|Ga0150985_100769978	Not Available	1217	Open in IMG/M
3300012212\|Ga0150985_102214437	Not Available	541	Open in IMG/M
3300012212\|Ga0150985_110898814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica	540	Open in IMG/M
3300012212\|Ga0150985_119772015	Not Available	1277	Open in IMG/M
3300012354\|Ga0137366_11199179	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium	516	Open in IMG/M
3300012356\|Ga0137371_10319111	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1209	Open in IMG/M
3300012469\|Ga0150984_103047277	Not Available	618	Open in IMG/M
3300012469\|Ga0150984_115008184	Not Available	1260	Open in IMG/M
3300012961\|Ga0164302_11290116	Not Available	589	Open in IMG/M
3300012971\|Ga0126369_12040957	Not Available	661	Open in IMG/M
3300015372\|Ga0132256_102759384	Not Available	590	Open in IMG/M
3300015373\|Ga0132257_102967150	Not Available	618	Open in IMG/M
3300016270\|Ga0182036_10048583	Not Available	2652	Open in IMG/M
3300016319\|Ga0182033_10060779	Not Available	2613	Open in IMG/M
3300016371\|Ga0182034_10323943	Not Available	1243	Open in IMG/M
3300016387\|Ga0182040_10541356	Not Available	936	Open in IMG/M
3300016404\|Ga0182037_11363216	Not Available	626	Open in IMG/M
3300016404\|Ga0182037_11821849	Not Available	544	Open in IMG/M
3300018468\|Ga0066662_12176654	Not Available	582	Open in IMG/M
3300018482\|Ga0066669_11566901	Not Available	600	Open in IMG/M
3300019767\|Ga0190267_11521839	Not Available	517	Open in IMG/M
3300027873\|Ga0209814_10004114	All Organisms → cellular organisms → Bacteria	5483	Open in IMG/M
3300027873\|Ga0209814_10025184	Not Available	2432	Open in IMG/M
3300027873\|Ga0209814_10041146	All Organisms → cellular organisms → Bacteria	1923	Open in IMG/M
3300027873\|Ga0209814_10054202	Not Available	1674	Open in IMG/M
3300027873\|Ga0209814_10099831	Not Available	1231	Open in IMG/M
3300027873\|Ga0209814_10230444	Not Available	802	Open in IMG/M
3300027880\|Ga0209481_10005756	All Organisms → cellular organisms → Bacteria	5254	Open in IMG/M
3300027880\|Ga0209481_10553664	Not Available	595	Open in IMG/M
3300027909\|Ga0209382_10005120	All Organisms → cellular organisms → Bacteria	17134	Open in IMG/M
3300027909\|Ga0209382_10157863	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	2623	Open in IMG/M
3300027909\|Ga0209382_10695372	Not Available	1095	Open in IMG/M
3300027909\|Ga0209382_10717408	Not Available	1074	Open in IMG/M
3300031545\|Ga0318541_10642298	Not Available	593	Open in IMG/M
3300031548\|Ga0307408_102234319	Not Available	529	Open in IMG/M
3300031668\|Ga0318542_10025892	All Organisms → cellular organisms → Bacteria	2475	Open in IMG/M
3300031731\|Ga0307405_11062782	Not Available	694	Open in IMG/M
3300031744\|Ga0306918_11335229	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300031771\|Ga0318546_10810615	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium	659	Open in IMG/M
3300031890\|Ga0306925_10400999	Not Available	1470	Open in IMG/M
3300031890\|Ga0306925_10817225	Not Available	966	Open in IMG/M
3300031903\|Ga0307407_10708701	Not Available	759	Open in IMG/M
3300031942\|Ga0310916_11204898	Not Available	626	Open in IMG/M
3300031995\|Ga0307409_101250531	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300031995\|Ga0307409_101457006	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300032002\|Ga0307416_100623492	Not Available	1161	Open in IMG/M
3300032002\|Ga0307416_101959305	Not Available	689	Open in IMG/M
3300032076\|Ga0306924_11320193	Not Available	774	Open in IMG/M
3300032261\|Ga0306920_101207574	Not Available	1092	Open in IMG/M
3300033289\|Ga0310914_11542354	Not Available	568	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	58.45%
Environmental	Environmental	41.55%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	58.45%
Terrestrial	Environmental → Terrestrial	40.14%
Aquatic	Environmental → Aquatic	1.41%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	51.41%
Soil	Environmental → Terrestrial → Soil	39.44%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.34%
Freshwater	Environmental → Aquatic → Freshwater	1.41%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.70%
Phylloplane	Host-Associated → Plants → Phylloplane	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	49.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.63%
Loam	Environmental → Terrestrial → Soil → Loam	4.23%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.11%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.41%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.70%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.70%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	49.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.49%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.11%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.41%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	44.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.04%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	4.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.82%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.11%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	2.11%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.41%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.41%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.41%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.70%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.70%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_10925271	2228664022	Soil	VSHLKYFKITKSWVVKLEDTATEADAIKQIAADPDKYLDSESVTRTEYKKPQQSAGGWKNGFRQQLLG
JGI11643J11755_117771091	3300000787	Soil	MVSHLKYFKITKSWKVEAATEEEAIKQVAQNPGQYLESETVTRTEYKKPQQKAGGWANGFRTQLLGQ*
JGI11643J11755_117869762	3300000787	Soil	MVSHLKYFKITKTWSVKAETEEEAIRQVAQNPGQYIESETVTRTEYKKPQQKAGGWANGFKAQLLGQQ*
JGI10213J12805_104317671	3300000858	Soil	MVSHLKYFKITKSWSVKAESEEEAIKQVAADPGQYLESESVTRTEYRKPQQKAGSWANGFKSQLLG*
JGI1027J12803_1081127752	3300000955	Soil	IAVKYFKITKTWAVQAESEAEAIKLIAADPVQYLDSETITRTEYKKPQQKTGWTNGFKQQLLGSNNKR*
Ga0066684_102901072	3300005179	Soil	VKYFKITKTWSVKAESEEEAIKQVAADPGQYLESETVTRTEYKKPQQKAGGWANRFKAQ
Ga0066671_105947752	3300005184	Soil	VKYFKITKSWVVKVEDTATEADAIKLVAANPDKYLDSETVTRTEYKKPQQKAGGWKNGFKNQILGQQ*
Ga0066675_110980081	3300005187	Soil	MSRSRQTAWERMVNHLKYFKITKSWSIKAESEEEAIKQVAADPAQYLESETVTRTDYKKPQQKTGGRSNGFNSQLLGYRVPL*
Ga0065704_101099982	3300005289	Switchgrass Rhizosphere	MEVSHLKYFKITKTWSVKAETEEEAIRQVAQNPGQYIESETVTRTEYKKPQQKAGGWANGFKSQLLG*
Ga0065704_102734411	3300005289	Switchgrass Rhizosphere	VKYFKITKTWSVKAETEEEAIRQVAQNPGQYIESETVTRTEYKKPQQKTGGWANGFKSQLLGS*
Ga0065704_107666112	3300005289	Switchgrass Rhizosphere	MEVSHLKYFKITKTWSVKAESEEEAIKQVAQNPGQYLDSESVTRTEYKKPQQKAGGWTNGFRTQLLGQ*
Ga0065705_100272743	3300005294	Switchgrass Rhizosphere	VKYFKITKSWVVKVEDTATEADAIKQVAADPDKYLDSESVTRTEYKKPQQKAGGWANGFRTQLLGQ*
Ga0065705_105670571	3300005294	Switchgrass Rhizosphere	VKYFKITKSWVVKVEDTATEADAIKLVAAEPEKYLDSETVTRTEYKKPQTKTGGWANGFKSQLLG*
Ga0065705_108091311	3300005294	Switchgrass Rhizosphere	VHVKYFKITKTWSVKAESEDEAIKQVAADPGQYLESESVQRTEYKKPQQKAGGWANGFKSQLLG*
Ga0065705_111188551	3300005294	Switchgrass Rhizosphere	VSHLKYFKITKSWSIKAESEEEAIKQVASDPAQYLESETVTRTDYKKPQQKTGGWANGFKTQLLG*
Ga0065707_100044792	3300005295	Switchgrass Rhizosphere	VKYFKITKTWSVKAESEDEAIKQVAADPGQYLESESVQRTEYKKPQQKAGGWANGFKSQLLG*
Ga0065707_101547391	3300005295	Switchgrass Rhizosphere	VSHLKYFKITKTWSVKAESEEEAIKQVAQNPGQYLDSESVTRTEYKKPQQKAGGWTNGFRTQLLGQ*
Ga0066388_1012662283	3300005332	Tropical Forest Soil	VKYFKITKTWSVKAESEEEAIKQVAANPGQYLESESVTRTEYKKPQQKAGGWANGFKSQLLGH*
Ga0066388_1015813272	3300005332	Tropical Forest Soil	ITKTWVVKVEDTATEADAIKQIAADPDKYLDQESVQRTEYKKPQQNAGGWKNGFRSQLLGH*
Ga0066388_1025836222	3300005332	Tropical Forest Soil	MKYFKITKTWVVKVEDTATEADAIKQIASDPDKYLDQESVQRTEYKKPQQNAGGWKNGFRQQLLGS*
Ga0066388_1052222961	3300005332	Tropical Forest Soil	VVNRSRDAFPEKEVSRLKYFKITKAWSIKAESEEEAIKQVASDPAQYLESETVTRTDYKKPQQKTGGWANGFKSQLLG*
Ga0066670_108334292	3300005560	Soil	VKYFKITKSWSVKAESEEEAIKQVAADPGQYLESETVTRTDYKKPQQKTGGWTNGFKSQLLG*
Ga0058697_107959032	3300005562	Agave	VSRLKYFKITKTWSVKAESEEEAIKQVAADPAQYLESETVTRTDYKKPQQKTGGWANGFKSQLLG
Ga0066903_1041483272	3300005764	Tropical Forest Soil	VSRLKYFKITKTWSIKAESEEEAIKQVASDPAQYLESETVTRTDYKKPQQKAGGWVNGFKSQLLG*
Ga0066903_1056228162	3300005764	Tropical Forest Soil	MKYFKITKTWSVKAESEEEAIKQVAADPGHYLEAETVTRVEYKKPQQKTGGWVNGFKSQLLG*
Ga0081455_106211601	3300005937	Tabebuia Heterophylla Rhizosphere	VKYFKITKTWSVKVEDTATEADAIKQVASDPDKYLESESVQRTEYKKPQQNSGGWKNGFRNQLLGH*
Ga0066656_110058191	3300006034	Soil	RDKVKYFKITKTWSVKAESEEEAIKQVAADPGQYLESESVTRTEYKKPQQKAGGWKNGFKNQLLGQQ*
Ga0075417_100028625	3300006049	Populus Rhizosphere	LEVSHLKYFKITKTWSVKAESEDEAIKQVAADPGQYLESESVTRTEYKKPQQKTNGWANGFRQQLLGGSGS*
Ga0075417_100133456	3300006049	Populus Rhizosphere	MVNHLKYFKITKSWSIKAESEEEAIKQVAADPGQYLESETVTRTEYKKPQQKAGGWKNGFKSQLLGQQ*
Ga0075417_100192004	3300006049	Populus Rhizosphere	MVNHLKYFKITKSWSVKAESEEEAIKQVAADPGQYLESESVTRTEYKKPLQKAGGWKNGFKNQLLGQQ*
Ga0075417_100486892	3300006049	Populus Rhizosphere	MVSHLKYFKITKSWSVKADSEEEAIKQVAADPGQYLESETVTRTDYKKPQQKTGGWTNGFKSQLLG*
Ga0075417_100900661	3300006049	Populus Rhizosphere	VSHLKYFKITKTWSVKAETEDEAIKQVAQNPGQYLESETVTRTEYKKPQQKAGGWKNGFKNQLLGQQ*
Ga0075417_101658061	3300006049	Populus Rhizosphere	VKYFKITKTWSVKAESEEEAIKQVAADPGHYLEAETVTRVEYKKPQQKTGGWANGFKSQLLG*
Ga0075417_102879051	3300006049	Populus Rhizosphere	VKYFKITKTWSVKAESEEEAIKQVAADPGQYLESESVQRTEYKKPHQNSGGWKNGFRQQLLGQ*
Ga0075417_105599092	3300006049	Populus Rhizosphere	VKYFKITKTWSVKAESEEEAIKQVAADPGQYLESESVQRTEYKKPQQNAGGWKNGFRNQLLGH*
Ga0075432_102051572	3300006058	Populus Rhizosphere	MVNHLKYFKITKSWSVKAESEEEAIKQVAADPGQYLESESVTRTEYKKPLQKAGGWKNGFKNQILGQQ*
Ga0075427_100062932	3300006194	Populus Rhizosphere	VNHLKYFKITKSWSIKAESEEEAIKQVAADPGQYLESETVTRTEYKKPQQKAGGWKNGFKSQLLGQQ*
Ga0075427_100068943	3300006194	Populus Rhizosphere	MKYFKITKTWSVKAESEDEAIKQVAADPGQYLDSETVTRTEYKKPLQKAGGWKNGFKNQILGQQ*
Ga0075427_100390022	3300006194	Populus Rhizosphere	PLREEVVRVKYFKFTKNWVVKVEDDATEADATKLVVANPDKYLDSETVTRTEYKKPLQKAGGWKNGFKNQILGQQ*
Ga0075428_1003465033	3300006844	Populus Rhizosphere	VKYFKITKSWKVEAATEEEAIKQVAQNPSQYLDSESVTRTEYKKPQQKAGGWANGFKSQLLG*
Ga0075428_1004007941	3300006844	Populus Rhizosphere	MKYFKITKSWAVKAESETEAIKLIAAEPEKYLDSQTITRTEYVKPPQKAGGWKNGFKSQLLGQQ*
Ga0075428_1015100481	3300006844	Populus Rhizosphere	MVSHLKYFKIIKSWSIKAESEEEAIKQVAADPAQYLESETVTRTDYKRPQQKTGGWANGFKSQLLG*
Ga0075428_1016990681	3300006844	Populus Rhizosphere	VKYFKITKTWSVKAETEDEAIKQVAQNPGQYLESETVTRTEYKKPQQKAGGWTNGFRSQILGH*
Ga0075428_1017310961	3300006844	Populus Rhizosphere	RYNQKYFKITKTWSVKAETEEEAIKQVAQNPGQYLDSESVTRTEYKKPQQKAGGWANGFKSQILGH*
Ga0075421_1001065703	3300006845	Populus Rhizosphere	VSHLKYFKIIKSWSIKAESEEEAIKQVAADPAQYLESETVTRTDYKRPQQKTGGWANGFKSQLLG*
Ga0075421_1002709494	3300006845	Populus Rhizosphere	VDGSRQTAWERSVSHLKYFKITKTWSVKAETEDEAIKQVAQNPGQYLESETVTRTEYKKPQQKAGGWKNGFKNQLLGQQ*
Ga0075421_1018599341	3300006845	Populus Rhizosphere	WSVKAETEEEAIKQVAQNPGQYLDSESVTRTEYKKPQQKAGGWANGFKSQILGH*
Ga0075430_1004575542	3300006846	Populus Rhizosphere	MVNHLKYFKITKSWSVKAESEEEAIKQVAADPGQYLESESVTRTEYKKPQQKTNGWANGFRQQLLGGSGS*
Ga0075430_1017982631	3300006846	Populus Rhizosphere	YFKITKSWSIKAESEEEAIKQVAADPGQYLESETVTRTEYKKPQQKAGGWKNGFKSQLLGQQ*
Ga0075430_1018088731	3300006846	Populus Rhizosphere	VKYFKITKSWKVEAATEEEAIKQVAQNPSQYLDSESVTRTEYKKPQQKAGGWANGFKSQL
Ga0075431_1000196094	3300006847	Populus Rhizosphere	MTPERGGERQMKYFKITKTWSVKAESEDEAIKQVAADPGQYLDSETVTRTEYKKPLQKAGGWKNGFKNQILGQQ*
Ga0075431_1004847052	3300006847	Populus Rhizosphere	VVNRSRQTAWERMVSHLKYFKIIKSWSIKAESEEEAIKQVAADPAQYLESETVTRTDYKRPQQKTGGWANGFKSQLLG*
Ga0075431_1006872411	3300006847	Populus Rhizosphere	VKYFKITKTWSVKAESEDEAIKQVAANPGQFLESETVTRTEYKKPLQKAGGWKNGFKNQILGQQ*
Ga0075431_1009487083	3300006847	Populus Rhizosphere	MVNHLKYFKITKSWSVKAESEEEAIKQVAADPGQYLESESVTRTEYKKPLQKAGGWKNGFKNQLLG
Ga0075433_101580416	3300006852	Populus Rhizosphere	MVNHLKYFKITKSWSIKAESEEEAIKQVAADPGQYLESETVTRTEYKKPQQKAGGWKNGF
Ga0075434_1002239411	3300006871	Populus Rhizosphere	MKYFKITKTWSVKAESEDEAIKQVAADPGQYLDSETVTRTEYKKPLQKAGGWKNGFKNQLLGQQ*
Ga0075434_1023618222	3300006871	Populus Rhizosphere	YFKITKTWSVKAESEEEAIKQVAADPGQYLESESVQRTEYKKPQQKAGGWANGFRQQLLGQ*
Ga0075429_1000031047	3300006880	Populus Rhizosphere	MKYFKITKTWSVKAESEDEAIKQVAADPGQFLESETVTRTEYKKPLQKAGGWKNGFKNQILGQQ*
Ga0075429_1000090426	3300006880	Populus Rhizosphere	VSHLKYFKITKSWSVKADSEEEAIKQVAADPGQYLESETVTRTDYKKPQQKTGGWTNGFKSQLLG*
Ga0075419_103444221	3300006969	Populus Rhizosphere	SHQKYFKITKTWSVKAESEEEAIKQVAANPGQYLESESVQRTEYKKPHQNSGGWKNGFRQQLLGQ*
Ga0075419_107309261	3300006969	Populus Rhizosphere	VKYFKITKTWSVKAESEEEAIKQVAADPGQYLESESVQRTEYKKPQQKAGGWTNGFRNQLLGH*
Ga0111539_105840971	3300009094	Populus Rhizosphere	LEVSHLKYFKITKTWSVKAETEDEAIKQVAQNPGQYLESETVTRTEYKKPQQKAGGWKNGFKNQLLGQQ*
Ga0111539_125890342	3300009094	Populus Rhizosphere	MVNHLKYFKITKSWSVKAESESGTRTEYKNPLQKAGGWKNGFKNQLLGQQ
Ga0111539_135109511	3300009094	Populus Rhizosphere	MVSHLKYFKITKSWSVKADSEEEAIKQVAADPGHSLESETVTRTDYKKPQQKTGGWTNGFKSQLLG*
Ga0075418_109505442	3300009100	Populus Rhizosphere	VKYFKITKTWAVKAESETEAIKLIAADPVQYLDSETITRTEYKKPQQKAGGWTNGFKEQLLGSNSKR*
Ga0075418_116946501	3300009100	Populus Rhizosphere	VVHVKYFKITKSWAVKAESEAEALKLVVADPEKYLDSETVTRTEYKKPQQKAGGWTNGFKNQLLGQK*
Ga0114129_1001312012	3300009147	Populus Rhizosphere	VKYFKITKTWSVKAESEEEAIKQVAADPGQYLESESVQRAEYKKPQQNAGGWKNGFRNQLLGH*
Ga0114129_100307499	3300009147	Populus Rhizosphere	MVNHLKYFKITKSWSIKAKSEEEAIKQVAADPGQYLESETVTRTEYKKPQQKAGGWKNGFKSQLLGQQ*
Ga0114129_101007731	3300009147	Populus Rhizosphere	VVHVKYFKITKSWKVEAATEEEAIKQVAQNPSQYLDSESVTRTEYKKPQQKAGGWANGFKSQLLG*
Ga0114129_104065803	3300009147	Populus Rhizosphere	VKYFKITKTWSVKAESEEEAIKQVAADPGQYLESESVTRTEYKKPQQKAGGWKNGFKNQLLGQQ*
Ga0114129_109532301	3300009147	Populus Rhizosphere	WSIKAESEEEAIKQVAADPAQYLESETVTRTDYKRPQQKTGGWANGFKSQLLG*
Ga0114129_109968991	3300009147	Populus Rhizosphere	VSSKIHRIRYNQKYFKITKTWSVKAETEEEAIKQVAQNPGQYLDSESVTRTEYKKPQQKAGGWANGFKSQILGH*
Ga0114129_125298011	3300009147	Populus Rhizosphere	VSRLKYFKITKSWSIKAESEEEAIKQVASDPAQYLESETVTRTDYKKPQQKTGGWANGFKSQLLG*
Ga0114129_130862581	3300009147	Populus Rhizosphere	VVRVKYFKITKTWSVKAESEDEAIKQVAADPGQYLDSESVTRTEYKRPQQKAGGWKNGFKNQLLGQQ*
Ga0114129_134562311	3300009147	Populus Rhizosphere	VKYFKITKTWSVKAESEAEAIKLVVASPDEYLDSESVQRTEYKKPLQKAGGWKNGFKNQLLGQQ*
Ga0111538_109914141	3300009156	Populus Rhizosphere	CRLVGTSDVPARSRGMTPERGGERQMKYFKITKTWSVKAESEDEAIKQVAADPGQYLDSETVTRTEYKKPLQKAGGWKNGFKNQILGQQ*
Ga0075423_102446582	3300009162	Populus Rhizosphere	MVNHLKYFKITKSWSIKAESEEEAIKQVATDPGQYLESETVTRTEYKKPQQKAGGWKNGFKSQLLGQQ*
Ga0075423_114615001	3300009162	Populus Rhizosphere	VSRLKYFKITKTWSIKAESEEEAIKQVASDPAQYLESETVTRTDYKKPQQKSGGWANGFKSQLLG*
Ga0126315_103796122	3300010038	Serpentine Soil	VNDYVKYFKITKTWSVKAESEEEAIKQVAADPGQYLESETVTRTEYKKPQQKAGGWKNGLKNQLLGQQ*
Ga0126315_106876652	3300010038	Serpentine Soil	VSHLKYFKITKTWSVRAETEDEAIKQVAQNPGQYLESETVTRTEYKRPQQKAGGWANGFKNQLLGQQ*
Ga0126312_104714443	3300010041	Serpentine Soil	MKYFKITKSWSVKAESEEEAIKQVAQNPGQYLESESVTRTEYKGPQQKAGSWANGFKSQLLGQQ*
Ga0126312_107696842	3300010041	Serpentine Soil	MEVSHLKYFKITKTWSVKAESEDEAIRQVAQNPGQYIESETVTRTEYKKPQQKAGGWANGFKNQLLGQQ*
Ga0126312_111299021	3300010041	Serpentine Soil	VKYFKITKSWVVKVEDTATEADAIKQVAADPDKYLDSETVTRTEYKKPQQKAGGWKNGLKNQLLGQQ*
Ga0126314_104228172	3300010042	Serpentine Soil	VSRLKYFKITKSWSIKAESEEEAIKQVASDPAQYLESETVTRTDYKKPQQKAGGWANGFKSQLLG*
Ga0126380_112262492	3300010043	Tropical Forest Soil	VVRVKYFKITKTWSVKAESEDEAIKQVAADPGQFLESEKISRTEYKKPQQRAGGWKNGFKNQLLGQQ*
Ga0126380_122160901	3300010043	Tropical Forest Soil	VSRLKYFKITKIWSIKAESEEEAIKQVATNPAQYLESETVTRTDYKKPQQKAGGWVNGFRSQLLG*
Ga0126310_112730331	3300010044	Serpentine Soil	ITKTWSVRAETEDEAIKQVAQNPGQYLESETVTRTEYKRPQQKAGGWANGFKNQLLGQQ*
Ga0126321_10665741	3300010145	Soil	VSRLKYFKITKSWSIKAESEEEAIKQVAADPAQYLESETVTRTDYKKPRQKNGGWANGFKSQLLG*
Ga0126321_12646942	3300010145	Soil	VSHKLAAKSRDAFPEKEVSRLKYFKITKSWSIKAESEEEAIKQVASDPAQYLESETVTRTDYKKPQPKANGWANGFKSQLLG*
Ga0126377_107006391	3300010362	Tropical Forest Soil	VKYFKITKSWAVKSESEAEAIKLIAADPEKYLDAETVTRTEYKKTQQKTGWANGFKSQLLGSNSNV*
Ga0138514_1001375792	3300011003	Soil	PGAGKLSLRLEVSRLKYFKITKTWSVKAESEEEAIKQVASDPAHYLESETVTRTDYKKPQQKAGGWANGFKNQLLGQ*
Ga0137364_111746781	3300012198	Vadose Zone Soil	MVSHLKYFKITKSWSIKAESEEEAIKQVASDPAQYLESETVTRTDYKKPQQKAGGWANGFRAQLLGQQ*
Ga0150985_1007699782	3300012212	Avena Fatua Rhizosphere	VGHLKYFKITKSWSIKAESEEEAIKQVASDPAQYLESETVTRTDYKKPQQKAGGWANGFKSQLLG*
Ga0150985_1022144371	3300012212	Avena Fatua Rhizosphere	MVSHLKYFKITKSWSVKAESEEEAIKQVAADPGQYLESESVTRTEYKKPQQKAGGWANGFRTQLLGQQ*
Ga0150985_1108988142	3300012212	Avena Fatua Rhizosphere	LEVSHLKYFKITKTWAVKAESESEAIKLVAADPEKYLDSEQVVRTEYKRPQQKTG
Ga0150985_1197720153	3300012212	Avena Fatua Rhizosphere	MKYFKITKSWSVKAESEDEAIKQVAADPGQYLESETVTRTDYKKSQQKTGGWTNGFKSQLLG*
Ga0137366_111991792	3300012354	Vadose Zone Soil	VSHLKYFKITKSWSVKAETEEEAIRQVAQNPGQYIESETVTRTEYKKPQQKAGGWVNGFKDQLLGQQ*
Ga0137371_103191112	3300012356	Vadose Zone Soil	VKYFKITKTWSVKAESEEEAIKQVAADPGQYLESETVTRTEYKRPQQKTGWGTAIRDQLIGSGSNGRQAR*
Ga0150984_1030472772	3300012469	Avena Fatua Rhizosphere	LEVSHLKYFKITKTWSVKAESEEEAIRQVAQNPGQYIESETVTRTEYKKPQQKTGGWANGFKAQLLGSGS*
Ga0150984_1150081841	3300012469	Avena Fatua Rhizosphere	MVSHLKYFKITKSWSIKAESEEEAIKQVASDPAQYLESETVTRTDYKKPQQKAGGWANGFKSQLLG*
Ga0164302_112901162	3300012961	Soil	MEVSHLKYFKITKTWSIKAESEEEAIKQVASDPAQYLESETVTQKAGGWANGFKSQLLG*
Ga0126369_120409571	3300012971	Tropical Forest Soil	VKYFKITKTWSVKVEDTATEADAIKQVASDPDKYLESESVQRTEYKKPQQNAGGWKNRFRNQLLGH*
Ga0132256_1027593841	3300015372	Arabidopsis Rhizosphere	DVPARSRGMAPERGGERAMKYFKITKTWSVKAETEEEAIKQVAADPGQFLESEIVTRTEYKKPLQKAGGWKNGFKNQILGQQ*
Ga0132257_1029671501	3300015373	Arabidopsis Rhizosphere	VVRVKYFKITKTWSVKAESEDEAIKQVAADPGQFLESEKISRTEYKKPQQKAGGWKNGFKNQLLGQQ*
Ga0182036_100485831	3300016270	Soil	VKYFKITKTWSVKAESEEEAIKQVASDPAQYLESETVTRTDYKKPQQKASGWVNGFKSQLLG
Ga0182033_100607794	3300016319	Soil	VKYFKITKTWVVKVEDTATEADAIKQIASDPDKYLDQESVQRTEYKKPQQNAGGWKNGFRLVFRTLS
Ga0182034_103239432	3300016371	Soil	VKYFKITKTWVVKVEDTATEADAIKQIASDPDKYLDQESVQRTEYKKPQQNAGGWKNGFRQQLLGG
Ga0182040_105413561	3300016387	Soil	KGVVHVKYFKITKTWVVKVEDTATEADAIKQIASDPDKYLDQESVQRTEYKKPQQNAGGWKNGFRSQLLGH
Ga0182037_113632162	3300016404	Soil	VVHVKYFKITKTWVVKVEDTATEADAIKQIASDPDKYLDQESVQRTEYKKPQQNAGGWKNGFRSQLLGH
Ga0182037_118218491	3300016404	Soil	YFKITKTWSVRAESEEDAIKQIAADPGHYLETESVTRTEQKKPQEKANGWANGFRQQLLG
Ga0066662_121766541	3300018468	Grasslands Soil	VKYFKITKTWSIKAESEEEAIKQVASDPAQYLESETVTRTDYKRPQQKAGGWANGFKSQLLG
Ga0066669_115669012	3300018482	Grasslands Soil	VSHLKYFKITKSWSVKAETEEEAIRQVAQNPGQYIESETVTRTEYKKPQQKAGGWVNGFKDQLLGQQ
Ga0190267_115218391	3300019767	Soil	VSRLKYFKITKTWSVKAESEEEAIKQVAADPAHYLESETVTRTDYKKPQQKAGGWANGFKSQLLG
Ga0209814_100041146	3300027873	Populus Rhizosphere	MVNHLKYFKITKSWSIKAESEEEAIKQVAADPGQYLESETVTRTEYKKPQQKAGGWKNGFKSQLLGQQ
Ga0209814_100251842	3300027873	Populus Rhizosphere	MVNHLKYFKITKSWSVKAESEEEAIKQVAADPGQYLESESVTRTEYKKPLQKAGGWKNGFKNQLLGQQ
Ga0209814_100411463	3300027873	Populus Rhizosphere	MVSHLKYFKITKSWSVKADSEEEAIKQVAADPGQYLESETVTRTDYKKPQQKTGGWTNGFKSQLLG
Ga0209814_100542021	3300027873	Populus Rhizosphere	LEVSHLKYFKITKTWSVKAESEDEAIKQVAADPGQYLESESVTRTEYKKPQQKTNGWANGFRQQLLGGSGS
Ga0209814_100998311	3300027873	Populus Rhizosphere	VKYFKITKTWSVKAESEEEAIKQVAADPGHYLEAETVTRVEYKKPQQKTGGWANGFKSQLLG
Ga0209814_102304442	3300027873	Populus Rhizosphere	VSHLKYFKITKTWSVKAETEDEAIKQVAQNPGQYLESETVTRTEYKKPQQKAGGWKNGFKNQLLGQQ
Ga0209481_100057567	3300027880	Populus Rhizosphere	VNHLKYFKITKSWSIKAESEEEAIKQVAADPGQYLESETVTRTEYKKPQQKAGGWKNGFKSQLLGQQ
Ga0209481_105536641	3300027880	Populus Rhizosphere	MKYFKITKTWSVKAESEDEAIKQVAADPGQYLDSETVTRTEYKKPLQKAGGWKNGFKNQILGQQ
Ga0209382_1000512013	3300027909	Populus Rhizosphere	VSHLKYFKITKSWSVKADSEEEAIKQVAADPGQYLESETVTRTDYKKPQQKTGGWTNGFKSQLLG
Ga0209382_101578634	3300027909	Populus Rhizosphere	MVSHLKYFKIIKSWSIKAESEEEAIKQVAADPAQYLESETVTRTDYKRPQQKTGGWANGFKSQLLG
Ga0209382_106953722	3300027909	Populus Rhizosphere	ELPLGKGVVHVKYFKITKSWKVEAATEEEAIKQVAQNPSQYLDSESVTRTEYKKPQQKAGGWANGFKSQLLG
Ga0209382_107174082	3300027909	Populus Rhizosphere	ITKTWSVKAETEEEAIKQVAQNPGQYLDSESVTRTEYKKPQQKAGGWANGFKSQILGH
Ga0318541_106422982	3300031545	Soil	VSHLKYFKITKTWSVRAESEEDAIKQIAADPGHYLETESVTRTEQKKPQEKANGWANGFRQQLLG
Ga0307408_1022343191	3300031548	Rhizosphere	VKYFKITKSWKVEAATEEEAIKQVAQNPSQYLESETVTRTEYKKPQQKAGGWANGFRTQLLGQ
Ga0318542_100258922	3300031668	Soil	VVHVKYFKITKTWVVKVEDTATEADAIKQIASDPDKYLDQESVQRTEYKKPQQNAGGWKNGFRLVFRTLS
Ga0307405_110627821	3300031731	Rhizosphere	VSHLKYFKITKSWSIKAESEEEAIKQVASDPAHYLESETVTRTDYKKPQQKTGGWANGFKSQLLG
Ga0306918_113352291	3300031744	Soil	VVNRSRDAFPEKEVSRLKYFKITKTWSIKAESEEEAIKQVASDPAQYLESETVTRTDYKKPQQKAGGWVNGFKSQLLG
Ga0318546_108106152	3300031771	Soil	VSHLKYFKITKTWSVKAETEEEAIKQVAADPGQYLESESVTRTEYKKPQQKAGGWKNGFRGQLLGQQ
Ga0306925_104009992	3300031890	Soil	VKYFKITKTWVVKVEDTATEADAIKQIASDPDKYLDQESVQRTEYKKPQQNAGGWKNGFRSQLLGH
Ga0306925_108172251	3300031890	Soil	FSQEQRNYPLGKGVVHVKYFKITKTWSVKAESEEEAIKQVAADPGHYLEAETVTRVEYKKPQQKTGGWANGFKSQLLG
Ga0307407_107087011	3300031903	Rhizosphere	VSRLKYFKITKSWSIKAESEEEAIKQVASDPAQYLESETVTRTDYKKPQQKAGGWANGFKSQLLG
Ga0310916_112048981	3300031942	Soil	LGKEVVHVKYFKITKTWSVKAETEEEAIKQVAADPGQYLESESVQRTEYKKPQQNAGGWKNGFRQQLLGG
Ga0307409_1012505311	3300031995	Rhizosphere	MVSHLKYFKITKSWSIKAESEEEAIKQVAADPAQYLESETVTRTDYKKPQQKTGGWANGF
Ga0307409_1014570062	3300031995	Rhizosphere	VQSITGSVSATRSSPCLVVDGSRQIAWERMVSHLKYFKITKTWSVKAESEDEAIKQVAKDPGQYLESETVTRTEYKKPQQKTGGWANGFKSQLLGQQ
Ga0307416_1006234922	3300032002	Rhizosphere	VSRLKYFKITKTWSVKAESEEEAIKQVASDPAQYLESETVTRTDYKKPQQKAGGWANGFKDQLLGQQ
Ga0307416_1019593051	3300032002	Rhizosphere	YFKITKTWSVKAETEEEAIKQVAADPGQYLESETVTRTEYKKPQQKAGGWKNGFKNQLLGQQ
Ga0306924_113201932	3300032076	Soil	VKYFKITKTWVVKVEDTATEADAIKQIASDPDKYLDQESVQRTEYKKPQQNAGGWKNGFRLVFRT
Ga0306920_1012075743	3300032261	Soil	VSHLKYFKITKVWSVKAESEDEAIKQVAANPGQYLESESVQRTEYKKPQQNAGGWANGFRQQLLGQ
Ga0310914_115423541	3300033289	Soil	ITKTWSVKAETEEEAIKQVAADPGQYLESESVQRTEYKKPQQNAGGWKNGFRQQLLGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052700

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences