Metagenome / Metatranscriptome Family F052691

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052691
Family Type	Metagenome / Metatranscriptome
Number of Sequences	142
Average Sequence Length	69 residues
Representative Sequence	GNITRRASGQTSLRCLGTRTTEESVQKVLQMAVDVFHWCDLPRKGIDFCVVSCSQQVV
Number of Associated Samples	115
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	47.89 %
% of genes near scaffold ends (potentially truncated)	64.08 %
% of genes from short scaffolds (< 2000 bps)	92.25 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.676 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (21.127 % of family members)
Environment Ontology (ENVO)	Unclassified (19.718 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.958 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.70% β-sheet: 0.00% Coil/Unstructured: 59.30%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF13655	RVT_N	2.82
PF12760	Zn_Tnp_IS1595	1.41
PF00440	TetR_N	0.70
PF00112	Peptidase_C1	0.70
PF01370	Epimerase	0.70
PF08592	Anthrone_oxy	0.70
PF06778	Chlor_dismutase	0.70
PF00078	RVT_1	0.70
PF08388	GIIM	0.70
PF02796	HTH_7	0.70
PF00982	Glyco_transf_20	0.70
PF04986	Y2_Tnp	0.70
PF01348	Intron_maturas2	0.70
PF01609	DDE_Tnp_1	0.70
PF01610	DDE_Tnp_ISL3	0.70
PF04255	DUF433	0.70
PF07883	Cupin_2	0.70
PF00106	adh_short	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	0.70
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.70
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.70
COG3253	Coproheme decarboxylase/chlorite dismutase	Coenzyme transport and metabolism [H]	0.70
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.70
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.70
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.70
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.70
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.70
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.68 %
All Organisms	root	All Organisms	37.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.68 %
cellular organisms	root	All Organisms → cellular organisms	35.92 %
Viruses	superkingdom	All Organisms → Viruses	1.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.68 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	35.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.34 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.41 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	0.70 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.70 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.68 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	4.23 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.41 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.41 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	0.70 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.70 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.70 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.70 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.68 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	4.23 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	1.41 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1.41 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	1.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.41 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %
Candidatus Fervidibacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fervidibacteria	0.70 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.70 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.70 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.70 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.70 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.68 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	4.23 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	1.41 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1.41 %
Anaplasmataceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Anaplasmataceae	1.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.41 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.70 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.70 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.70 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %
Candidatus Fervidibacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fervidibacteria	0.70 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.68 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	4.23 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	1.41 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1.41 %
Wolbachieae	tribe	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Anaplasmataceae → Wolbachieae	1.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.41 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.70 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.70 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.70 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %
Candidatus Fervidibacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fervidibacteria	0.70 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.68 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	4.23 %
Pseudomonas aeruginosa group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group	1.41 %
Acutalibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Acutalibacter	1.41 %
Wolbachia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Anaplasmataceae → Wolbachieae → Wolbachia	1.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.41 %
unclassified Microvirga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga	0.70 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.70 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.70 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %
Candidatus Fervidibacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fervidibacteria	0.70 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.68 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	4.23 %
Pseudomonas aeruginosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas aeruginosa	1.41 %
unclassified Wolbachia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Anaplasmataceae → Wolbachieae → Wolbachia → unclassified Wolbachia	1.41 %
unclassified Acutalibacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Acutalibacter → unclassified Acutalibacter	1.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.41 %
Microvirga sp. VF16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. VF16	0.70 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.70 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.70 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %
Candidatus Fervidibacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fervidibacteria	0.70 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.68 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	4.23 %
Acutalibacter sp. 1XD8-33	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Acutalibacter → unclassified Acutalibacter → Acutalibacter sp. 1XD8-33	1.41 %
Wolbachia endosymbiont of Cylisticus convexus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Anaplasmataceae → Wolbachieae → Wolbachia → unclassified Wolbachia → Wolbachia endosymbiont of Cylisticus convexus	1.41 %
Pseudomonas aeruginosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas aeruginosa	1.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.41 %
Microvirga sp. VF16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. VF16	0.70 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.70 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.70 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %
Candidatus Fervidibacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fervidibacteria	0.70 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000858\|JGI10213J12805_10019313	Not Available	905	Open in IMG/M
3300002562\|JGI25382J37095_10163806	Not Available	705	Open in IMG/M
3300004016\|Ga0058689_10096913	Not Available	619	Open in IMG/M
3300004633\|Ga0066395_10567649	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	662	Open in IMG/M
3300005295\|Ga0065707_10496784	Not Available	760	Open in IMG/M
3300005332\|Ga0066388_100482249	All Organisms → cellular organisms → Bacteria	1878	Open in IMG/M
3300005332\|Ga0066388_103633454	Not Available	787	Open in IMG/M
3300005338\|Ga0068868_101819241	Not Available	576	Open in IMG/M
3300005344\|Ga0070661_100127708	All Organisms → cellular organisms → Bacteria	1908	Open in IMG/M
3300005446\|Ga0066686_10492978	Not Available	835	Open in IMG/M
3300005467\|Ga0070706_100042238	All Organisms → cellular organisms → Bacteria	4211	Open in IMG/M
3300005471\|Ga0070698_100236588	All Organisms → cellular organisms → Bacteria	1759	Open in IMG/M
3300005518\|Ga0070699_101194867	Not Available	698	Open in IMG/M
3300005540\|Ga0066697_10710332	Not Available	550	Open in IMG/M
3300005561\|Ga0066699_10445107	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300005562\|Ga0058697_10555318	Not Available	594	Open in IMG/M
3300005713\|Ga0066905_101597623	Not Available	596	Open in IMG/M
3300005764\|Ga0066903_102928219	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	925	Open in IMG/M
3300005843\|Ga0068860_100321088	All Organisms → cellular organisms → Bacteria → Proteobacteria	1520	Open in IMG/M
3300005843\|Ga0068860_100890997	Not Available	905	Open in IMG/M
3300005981\|Ga0081538_10027519	All Organisms → cellular organisms → Bacteria	3940	Open in IMG/M
3300006058\|Ga0075432_10008964	All Organisms → cellular organisms → Bacteria	3411	Open in IMG/M
3300006058\|Ga0075432_10014992	All Organisms → cellular organisms → Bacteria	2642	Open in IMG/M
3300006196\|Ga0075422_10177117	Not Available	865	Open in IMG/M
3300006844\|Ga0075428_100328379	All Organisms → cellular organisms → Bacteria	1643	Open in IMG/M
3300006844\|Ga0075428_102705823	Not Available	505	Open in IMG/M
3300006845\|Ga0075421_100295902	All Organisms → cellular organisms → Bacteria	1969	Open in IMG/M
3300006845\|Ga0075421_100339211	All Organisms → cellular organisms → Bacteria	1818	Open in IMG/M
3300006845\|Ga0075421_100763839	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300006847\|Ga0075431_100872364	Not Available	870	Open in IMG/M
3300006847\|Ga0075431_101188512	Not Available	726	Open in IMG/M
3300006853\|Ga0075420_101318840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	620	Open in IMG/M
3300006854\|Ga0075425_100809213	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fervidibacteria	1074	Open in IMG/M
3300006854\|Ga0075425_102525720	Not Available	568	Open in IMG/M
3300006871\|Ga0075434_100657118	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300006871\|Ga0075434_101994510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	586	Open in IMG/M
3300006904\|Ga0075424_100177690	All Organisms → cellular organisms → Bacteria	2258	Open in IMG/M
3300006904\|Ga0075424_101896509	Not Available	629	Open in IMG/M
3300006969\|Ga0075419_10308235	Not Available	1068	Open in IMG/M
3300007076\|Ga0075435_101379187	Not Available	618	Open in IMG/M
3300009038\|Ga0099829_10145780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1886	Open in IMG/M
3300009094\|Ga0111539_11010729	Not Available	967	Open in IMG/M
3300009094\|Ga0111539_11536447	Not Available	772	Open in IMG/M
3300009100\|Ga0075418_10122443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. VF16	2763	Open in IMG/M
3300009100\|Ga0075418_10364739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas aeruginosa	1543	Open in IMG/M
3300009137\|Ga0066709_100628373	All Organisms → cellular organisms → Bacteria	1534	Open in IMG/M
3300009137\|Ga0066709_104353826	Not Available	516	Open in IMG/M
3300009147\|Ga0114129_10531787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas aeruginosa	1531	Open in IMG/M
3300009147\|Ga0114129_12389525	Not Available	633	Open in IMG/M
3300009148\|Ga0105243_12412267	Not Available	564	Open in IMG/M
3300009162\|Ga0075423_11374170	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300009553\|Ga0105249_10233045	All Organisms → cellular organisms → Bacteria	1816	Open in IMG/M
3300009553\|Ga0105249_11409251	Not Available	769	Open in IMG/M
3300009814\|Ga0105082_1103288	Not Available	540	Open in IMG/M
3300009840\|Ga0126313_10119529	All Organisms → cellular organisms → Bacteria	1959	Open in IMG/M
3300010038\|Ga0126315_10032371	All Organisms → cellular organisms → Bacteria	2729	Open in IMG/M
3300010047\|Ga0126382_12111233	Not Available	539	Open in IMG/M
3300010086\|Ga0127496_1044545	All Organisms → Viruses → Predicted Viral	1135	Open in IMG/M
3300010093\|Ga0127490_1085271	Not Available	700	Open in IMG/M
3300010097\|Ga0127501_1071567	Not Available	741	Open in IMG/M
3300010103\|Ga0127500_1022906	Not Available	803	Open in IMG/M
3300010119\|Ga0127452_1016974	Not Available	724	Open in IMG/M
3300010304\|Ga0134088_10688599	Not Available	513	Open in IMG/M
3300010336\|Ga0134071_10108125	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300010359\|Ga0126376_12117107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	606	Open in IMG/M
3300011270\|Ga0137391_10626098	Not Available	900	Open in IMG/M
3300012046\|Ga0136634_10388719	Not Available	580	Open in IMG/M
3300012206\|Ga0137380_10710066	Not Available	872	Open in IMG/M
3300012209\|Ga0137379_11619753	Not Available	546	Open in IMG/M
3300012210\|Ga0137378_11818824	Not Available	513	Open in IMG/M
3300012212\|Ga0150985_114838560	Not Available	696	Open in IMG/M
3300012350\|Ga0137372_11154909	Not Available	527	Open in IMG/M
3300012353\|Ga0137367_10551669	Not Available	809	Open in IMG/M
3300012357\|Ga0137384_10862486	Not Available	730	Open in IMG/M
3300012359\|Ga0137385_10062114	All Organisms → cellular organisms → Bacteria	3327	Open in IMG/M
3300012359\|Ga0137385_11320981	Not Available	584	Open in IMG/M
3300012362\|Ga0137361_11060766	Not Available	731	Open in IMG/M
3300012362\|Ga0137361_11360599	Not Available	634	Open in IMG/M
3300012364\|Ga0134027_1057591	Not Available	877	Open in IMG/M
3300012379\|Ga0134058_1225677	Not Available	1105	Open in IMG/M
3300012381\|Ga0134026_1235600	Not Available	775	Open in IMG/M
3300012382\|Ga0134038_1115624	Not Available	1256	Open in IMG/M
3300012390\|Ga0134054_1177637	Not Available	635	Open in IMG/M
3300012401\|Ga0134055_1385294	Not Available	1019	Open in IMG/M
3300012405\|Ga0134041_1397255	Not Available	520	Open in IMG/M
3300012469\|Ga0150984_110479841	Not Available	1012	Open in IMG/M
3300012469\|Ga0150984_119676684	All Organisms → Viruses → Predicted Viral	1030	Open in IMG/M
3300012486\|Ga0157331_1040932	Not Available	500	Open in IMG/M
3300012905\|Ga0157296_10143054	Not Available	707	Open in IMG/M
3300012948\|Ga0126375_11218759	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300012948\|Ga0126375_11856853	Not Available	528	Open in IMG/M
3300012971\|Ga0126369_11789297	Not Available	703	Open in IMG/M
3300012971\|Ga0126369_12470361	Not Available	605	Open in IMG/M
3300012971\|Ga0126369_13299400	Not Available	529	Open in IMG/M
3300013308\|Ga0157375_13276005	Not Available	540	Open in IMG/M
3300016294\|Ga0182041_11983266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	542	Open in IMG/M
3300016341\|Ga0182035_11572788	Not Available	592	Open in IMG/M
3300016341\|Ga0182035_12138906	Not Available	508	Open in IMG/M
3300016357\|Ga0182032_10822837	Not Available	786	Open in IMG/M
3300016445\|Ga0182038_11087246	Not Available	710	Open in IMG/M
3300018063\|Ga0184637_10064709	All Organisms → cellular organisms → Bacteria	2237	Open in IMG/M
3300018071\|Ga0184618_10264115	Not Available	729	Open in IMG/M
3300018077\|Ga0184633_10238324	Not Available	936	Open in IMG/M
3300018078\|Ga0184612_10203252	All Organisms → cellular organisms → Bacteria → Proteobacteria	1029	Open in IMG/M
3300019232\|Ga0180114_1152970	Not Available	645	Open in IMG/M
3300021073\|Ga0210378_10238709	Not Available	689	Open in IMG/M
3300021307\|Ga0179585_1108265	Not Available	545	Open in IMG/M
3300025910\|Ga0207684_10035309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	4245	Open in IMG/M
3300027332\|Ga0209861_1020446	Not Available	986	Open in IMG/M
3300027490\|Ga0209899_1002418	All Organisms → cellular organisms → Bacteria	4227	Open in IMG/M
3300027873\|Ga0209814_10106883	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300027909\|Ga0209382_10955465	Not Available	897	Open in IMG/M
3300027909\|Ga0209382_11086185	Not Available	827	Open in IMG/M
3300027909\|Ga0209382_12190409	Not Available	523	Open in IMG/M
3300028047\|Ga0209526_10170729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1517	Open in IMG/M
3300030620\|Ga0302046_11172693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Anaplasmataceae → Wolbachieae → Wolbachia → unclassified Wolbachia → Wolbachia endosymbiont of Cylisticus convexus	605	Open in IMG/M
3300030829\|Ga0308203_1020519	Not Available	855	Open in IMG/M
3300030990\|Ga0308178_1027470	Not Available	949	Open in IMG/M
3300031099\|Ga0308181_1057621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Acutalibacter → unclassified Acutalibacter → Acutalibacter sp. 1XD8-33	754	Open in IMG/M
3300031114\|Ga0308187_10225046	Not Available	669	Open in IMG/M
3300031561\|Ga0318528_10727671	Not Available	531	Open in IMG/M
3300031562\|Ga0310886_10164964	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300031564\|Ga0318573_10409281	Not Available	729	Open in IMG/M
3300031573\|Ga0310915_10908383	Not Available	617	Open in IMG/M
3300031820\|Ga0307473_10230477	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300031833\|Ga0310917_10543002	Not Available	790	Open in IMG/M
3300031901\|Ga0307406_10692738	Not Available	850	Open in IMG/M
3300031901\|Ga0307406_11812335	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300031941\|Ga0310912_10216725	All Organisms → cellular organisms → Bacteria	1467	Open in IMG/M
3300032012\|Ga0310902_11306946	Not Available	514	Open in IMG/M
3300032025\|Ga0318507_10338751	Not Available	655	Open in IMG/M
3300032179\|Ga0310889_10768391	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300032205\|Ga0307472_101010459	Not Available	780	Open in IMG/M
3300032205\|Ga0307472_101271987	Not Available	707	Open in IMG/M
3300033289\|Ga0310914_11836924	Not Available	510	Open in IMG/M
3300034178\|Ga0364934_0332260	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	576	Open in IMG/M
3300034660\|Ga0314781_040074	Not Available	808	Open in IMG/M
3300034661\|Ga0314782_113910	Not Available	627	Open in IMG/M
3300034662\|Ga0314783_086823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Anaplasmataceae → Wolbachieae → Wolbachia → unclassified Wolbachia → Wolbachia endosymbiont of Cylisticus convexus	648	Open in IMG/M
3300034663\|Ga0314784_145384	Not Available	533	Open in IMG/M
3300034680\|Ga0370541_003025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1398	Open in IMG/M
3300034680\|Ga0370541_008547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Acutalibacter → unclassified Acutalibacter → Acutalibacter sp. 1XD8-33	994	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	67.61%
Host-Associated	Host-Associated	32.39%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.68%
Plants	Host-Associated → Plants	32.39%
Aquatic	Environmental → Aquatic	4.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.46%
Sediment	Environmental → Aquatic → Sediment	2.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.82%
Freshwater	Environmental → Aquatic → Freshwater	2.11%
Floodplain	Environmental → Terrestrial → Floodplain	0.70%
Roots	Host-Associated → Plants → Roots	0.70%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.70%
Phylloplane	Host-Associated → Plants → Phylloplane	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	25.35%
Loam	Environmental → Terrestrial → Soil → Loam	7.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.82%
Sand	Environmental → Terrestrial → Soil → Sand	2.11%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.11%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.11%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.41%
Ice	Environmental → Aquatic → Freshwater → Ice	0.70%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.70%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.70%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.70%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	25.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.93%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.82%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.11%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.41%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.70%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	21.13%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	9.86%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.52%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.11%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.11%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.11%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.41%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.41%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.41%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.41%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.41%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.70%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.70%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.70%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.70%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.70%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.70%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010086	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010093	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010097	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010103	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010119	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012046	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ833 (21.06)	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012379	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012381	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012382	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012390	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012405	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012486	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.120510	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300019232	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT530_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021307	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027332	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M
3300034660	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034661	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034662	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034663	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034680	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10213J12805_100193133	3300000858	Soil	GGKKRRPSCNGTDTGCNITRRASGLTSLRCLGTRTMEESIQKVLQMAVDVFHWCYLPHEGIDFYVVSCSQQVFFMLTGPSHGL*
JGI25382J37095_101638062	3300002562	Grasslands Soil	MPFCSGTDTGCNITRRESELTSLRCLGTRTTEESIQKVLQMSVALFHWCYLPRKGIDFGAVSYSQQVV*
Ga0058689_100969132	3300004016	Agave	VDMGCARPMGNITRRASGQTSLRCLGTRSTEESVQKVLQMAVALCHWCYLPHKGIDFCLVSCSQQVVDC*
Ga0066395_105676492	3300004633	Tropical Forest Soil	SELTSLRCLGTRTTEESIQKVLQMSVAWFHWCYLPRKGIDFGVVSYSQQVVGR*
Ga0065707_104967841	3300005295	Switchgrass Rhizosphere	ITRRASELTSLRCLGTRTTEESLQKVLQMTVAWFHWCYLPRQGIDFGSVSYSQQVVGLLTGPSHGLRDA*
Ga0066388_1004822491	3300005332	Tropical Forest Soil	GQTSLRCLGTRITEESTQKVLQMTVAVSHWCYLPRKGIDVRVVSCSQQVL*
Ga0066388_1036334541	3300005332	Tropical Forest Soil	MPPCSGTDTGGNMTRRASELTSLRCLGTRTTEESIQKVLHMSVAWFHWCSLPRKGIDFGVVSYSQQVVG
Ga0068868_1018192411	3300005338	Miscanthus Rhizosphere	GNITRRASGQTSLRCLGTKTTEESVQKVLQMAVDVCHWCYLPREGIDFCVVSCSQQVTSLLTGRPSHGLWDA*
Ga0070661_1001277084	3300005344	Corn Rhizosphere	SGLTSLRCLGTRSTEESTQKVLQMTVAVLHWCYLPRKGIDLCVVSCSQQVV*
Ga0066686_104929782	3300005446	Soil	MGNITRRASGQTSLRCLGTRTTEESVEKVLQMAVDVFHWCYLPREGIDFCVVSCSQQVTLLLTGRPSHGLWDA*
Ga0070706_1000422383	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPSCNGTDTGCNITRRESAQTSLRCLGTRTIEESIQKVLQMTVAFLHWCYLPHKGIDVCLVSCSQQVVLLLTGPSHGL*
Ga0070698_1002365882	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MAVRVWGWEKANAVLNGTDTGCNITRRESAQTSLRCLGTRTIEESIQKVLQMTVAFLHWCYLPHKGIDVCLVSCSQQVVLLLTGPSHGL*
Ga0070699_1011948672	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTRRASGLTSLRCLDTRTREESVQKVLQMSVAWSHWCYLPREGIDCSVVSCSQQVVRLLTGPLHGL*
Ga0066697_107103321	3300005540	Soil	MGNITRRASGQTSLRCLGTRTTEESVEKVLQMAVDVFHWCYLPREGIDFCVVSCSQQVVSLLTGPSHGL*
Ga0066699_104451072	3300005561	Soil	MGNITRRASGQTSLRCLGTRTTEESVEKVLQMAVDVFHWCYLPREGIDFCVVSCSQQVT*
Ga0058697_105553181	3300005562	Agave	MGWIRVASDSGNMTRRASGQTSLRCLGTRTREESVQKVLQMAVASCHWCYLPREGIDFSVVSCSQQV
Ga0066905_1015976232	3300005713	Tropical Forest Soil	MAVRVRGWEKVKAVLNGTDTGGHITRRASGLTSLRCLGTRTREEAIQKVLQMAVAWCHWGSLPREGIDFFAVSCSQQVVSLLTGPHTAFE
Ga0066903_1029282191	3300005764	Tropical Forest Soil	FGNLTRRASGQTSLRCLGTRITEESTQQVWQMTVAVSHWCSLPRKGIDVCVVSCSQQVL*
Ga0068860_1003210883	3300005843	Switchgrass Rhizosphere	MPSCSGTDTGGHITRRASELTSLRCLGTRTREESIQKVLQMTVAWFPWCYLPREGIDFS
Ga0068860_1008909972	3300005843	Switchgrass Rhizosphere	MGNITCRASGQTSLRCLGTRTTEESVQKVLQMAVASCHWCYLPRKGIDLRLDRAASMVFFMLTGLSQGL*
Ga0081538_100275193	3300005981	Tabebuia Heterophylla Rhizosphere	MPFCNGRDTGGNITRRASEPTSLRCLGTKTIEELVQKVLQMSVDVFHWCYLPRKGINFYVVSCSQQVVNC*
Ga0075432_100089643	3300006058	Populus Rhizosphere	MPPCSGVDTGGARSVGNMTRRASGLTSLRCLDTRTREESVQKVLQMSVAWSHWCYLPREGIDFSVVSCSQQVVRLLTGPLHGL*
Ga0075432_100149925	3300006058	Populus Rhizosphere	MAVRVWGREKRRPPCNGEDTGCARGTGNITRRASGQTSLRCLGTRTTEESVQKVLQMAVDVFHWCYLPRKGIDFCVVSCSQQVTLLLTGPSQGL*
Ga0075422_101771171	3300006196	Populus Rhizosphere	MTRRASGLTSLRCLDTRTREESVQKVLQMSVAWSHWCYLPREGIDFSVVSCSQQVVRLLTGPLHGL*
Ga0075428_1003283794	3300006844	Populus Rhizosphere	TGNITRRASGQTSLRCLGTRTTEESVQKVLQMAVDVFHWCYLPRQGINFCVVSCSQQVTLLLTGRPSHGL*
Ga0075428_1027058231	3300006844	Populus Rhizosphere	TGNITRRASGQTSLRCLGTRTTEESVQKVLQMAVDVFHWCDLPRKGIDFCVVSCSQQVV*
Ga0075421_1002959023	3300006845	Populus Rhizosphere	GGNITRRASEPTSLRCLGTKTIEELVQKVLQMSVDVFHWCYLPRKGINFYVVSCSQQVVNC*
Ga0075421_1003392111	3300006845	Populus Rhizosphere	MPPCSGVDTGCARSLGNMTRRASGLTSLRCLDTRTREESVQKVLQMSVAWSHWCYLPREGIDFSVVSCSQQVVRLLTGPLHGL*
Ga0075421_1007638393	3300006845	Populus Rhizosphere	MTRRESELTSLRCLGTRTTEESVEKVLQMSVALFHWCYLPRKGIDFGAVSCSQ*
Ga0075431_1008723641	3300006847	Populus Rhizosphere	TSLRCLGTRITEESTQKVLQMTVAVSHWCYLPRKGIDFCVVSCSQQVL*
Ga0075431_1011885122	3300006847	Populus Rhizosphere	CGYGGGKKRMPSRSGADTGCNSTRRESGLTSLRCLGTRTIEESVQKVLQMAVALFHWCYLPRQGIDFGSVSYSQQVLRLLTGPSHGL*
Ga0075420_1013188401	3300006853	Populus Rhizosphere	TRRASELTSLRCLGTRTREESIQKVLQMAVAGFHWCYLPREGIDFFVVSCSQQVVRLLTGPSQGL*
Ga0075425_1008092132	3300006854	Populus Rhizosphere	MTRRASELTSLRCLGTRTTEESVEKVLQMSVALFHWCYLPRKGIDFGAVSCSQ*
Ga0075425_1025257202	3300006854	Populus Rhizosphere	MPLGNGEDTGCARRTGNITRRASGQTSLRCLGTRTPEESVQKVLQMAVDVFHWCYLPRKGIDFCVVS
Ga0075434_1006571182	3300006871	Populus Rhizosphere	PPCNGVDTGCARGLGNITRRASGQTSLRCLGTKTREESIQKVLQMAVAACHWCYLPREGIDFSVVSCSQQVV*
Ga0075434_1019945101	3300006871	Populus Rhizosphere	GCDITRRESEPTSLRCLGTKTIEELVQKVWQMSVAVCHWCYLPRKGINFYVVSCSQQVINC*
Ga0075424_1001776902	3300006904	Populus Rhizosphere	MDTGCNITRRASGLTSLRCLGTRITEESVEKVMQMAVDVFHWCYLPRKGIDFCRVSCSQQV*
Ga0075424_1018965091	3300006904	Populus Rhizosphere	KRRPSCNGTDTGCNITRRASGLTSLRCLGTRTREESIQKVLQMAVAGFHWCYLPREGIDFFAVSCSQQVVSLLTGPSHGL*
Ga0075419_103082351	3300006969	Populus Rhizosphere	RRASGQTSLRCLGTRITEESAQKVLQMTVAVSHWCYLPRKGIDVWVVSCSQQVL*
Ga0075435_1013791871	3300007076	Populus Rhizosphere	RTGNITRRASGQTSLRCLGTRTPEESVQKVLQMAVDVFHWCYLPRKGIDFCVVSCSQQVTLLLTGPSQGL*
Ga0099829_101457802	3300009038	Vadose Zone Soil	MPFCNGTDTGCNITRRESELTSLRCLGTRTTEESVQKVLQMSVALFHWCYLPREGIDLGSVSCSQQVL*
Ga0111539_110107291	3300009094	Populus Rhizosphere	ITRRASGQTSLRCLGTRITEESAQKVLQMTVAVSHWCYLPRKGIDVWVVSCSQQVL*
Ga0111539_115364471	3300009094	Populus Rhizosphere	MPFCNGRDTGGNITRRASEPPSLRCLGTQTIEELVQKVLQMSVDVCHWCYLPRKGINFYAVSCSQQVV*
Ga0075418_101224432	3300009100	Populus Rhizosphere	MPSRSGADTGCNSTRRESGLTSLRCLGTRTIEESVQKVLQMAVALFHWCYLPRQGIDFGSVSYSQQVLRLLTGPSHGL*
Ga0075418_103647391	3300009100	Populus Rhizosphere	TGCARRTGNITRRASGQTSLRCLGTRTTEESVQKVLQMAVDVFHWCYLPRQGINFCVVSCSQQVTLLLTGRPSHGL*
Ga0066709_1006283731	3300009137	Grasslands Soil	TGWNITRRASAQTSLRCLGTRTMEESIQKVLQMTVAFLHWCYLPRQGIDVCLVSCSQQVFLLLTGPSHGL*
Ga0066709_1043538261	3300009137	Grasslands Soil	NITRRASGQTSLRCLGTRTTEESVEKVLQMAVDVFHWCYLPREGIDFCVVSCSQQVT*
Ga0114129_105317871	3300009147	Populus Rhizosphere	RRTGNITRRASGQTSLRCLGTRTTEESVQKVLQMAVDVFHWCYLPRQGINFCVVSCSQQVTLLLTGRPSHGL*
Ga0114129_123895251	3300009147	Populus Rhizosphere	MDTGCNITRRASGLTSLRCLGTRITEESVEKVMQMAVDVFHWCYLPRKGIDFCRVSC
Ga0105243_124122671	3300009148	Miscanthus Rhizosphere	MPSCSGTDTGGHITRRASEPTSLRCLGTKTIEELVQKVLQMSVAVCHWCYLPRKGINFYVVSCSQQ
Ga0075423_113741702	3300009162	Populus Rhizosphere	ASGQTSLRCLGTRTTEESVQKVLQMAVDVFHWCDLPRKGIDFCVVSCSQQVV*
Ga0105249_102330452	3300009553	Switchgrass Rhizosphere	MGGNITRRASEPTSLRCLGTKTIEELVQKVLQMSVAVCHWCYLPRKGINFYVVSCSQQVVNC*
Ga0105249_114092512	3300009553	Switchgrass Rhizosphere	VDTGCARGLGNITRRASGQTSLRCLGTRITEESTQKVLQMTVAVSHWCYLPRKGIDFCVV
Ga0105082_11032881	3300009814	Groundwater Sand	MPSCNGTDTGCNITRRESEQTSLRCLGTRTPEESVEKVMQMAVDVFHWCYLPRKGIDFWLVSCSQHVFPMLTGPSHGL*
Ga0126313_101195292	3300009840	Serpentine Soil	MPPCNGRDTGCNITRRESEPTSLRCLGTKTIEELVQKVLQMAVDVFHWCYLPRKGINFYVSIVQPAGC*
Ga0126315_100323714	3300010038	Serpentine Soil	MPPCNGRDTGCNITRRESEPPSLRCLGTKTIEELVQKVLQMAVDVFHWCYLPRKGINFYVSIVQPAGC*
Ga0126382_121112331	3300010047	Tropical Forest Soil	ITRRASELTSLRCLGTRTTEESIQKVLQMSVAWFHWCYLPRKGIDFGAVSYSQQVV*
Ga0127496_10445453	3300010086	Grasslands Soil	MGNITRRASGQTSLRCLGTRTTEESVEKVLQMAVDVFHWCYLPREGIDFCVVSCSQQVTLLLTGRPS
Ga0127490_10852711	3300010093	Grasslands Soil	MGNITRRASGQTSLRCLGTRTTEESVEKVLQMAVDVFHWCYLPREGIDFCRVSCSQQVTS
Ga0127501_10715671	3300010097	Grasslands Soil	MTVWVRRGKKRRPFCNGTDTGCNITRRESELTSLRCLGTRTTEESVQKVLQMSVALFHWCYLPREGIDFCRVSCSQQVTSLLTGP
Ga0127500_10229061	3300010103	Grasslands Soil	MPPCNGEDTGCARSMGNITRRASGQTSLRCLGTRTTEESVEKVLQMAVDVFHWCYLPREGIDFCVVSCSQQVTLLLTGRPSH
Ga0127452_10169741	3300010119	Grasslands Soil	CNGTDTGCNITRRESAQTSLRCLGTRTIEESIQKVLQMTVAFLHWCYLPRKGIDVCLVSCSQQVVLLLTGPSHGL*
Ga0134088_106885992	3300010304	Grasslands Soil	MPPCNGEDTGCARSMGNITRRASGQTSLRCLGTRTTEESVEKVLQMAVDVFHWCYLPREGIDFCVVSCSQQVTLLLTGRPS
Ga0134071_101081253	3300010336	Grasslands Soil	MPPCNGEDTGCARSMGNITRRASGQTSLRCLGTRTTEESVEKVLQMAVDVFHWCYLPREGIDFCVVSCSQQVTLLLTGRPSHGLWDA*
Ga0126376_121171071	3300010359	Tropical Forest Soil	GCNITRRASGLTSLRCLGTRTREESIQKVLPMAVAWFHWGSLPREGIDFFAVSCSQQVVSLLTGPLHGL*
Ga0137391_106260981	3300011270	Vadose Zone Soil	SAQTSLRCLGTRTIEESIQKVLQMTVASLHWCYLPRKGIDVCLVSCSQQVVILLTGPSHGL*
Ga0136634_103887191	3300012046	Polar Desert Sand	MTLRESGQTILRCLGTRTTEESVQKVLQMSVALFHWCYLPLSLSERASC
Ga0137380_107100661	3300012206	Vadose Zone Soil	MPFCSGTDTGCHITRRESELTSLRCLGTRTTEESIQKVLQMSVALFHWCYLPRKGIDFGAVSYSQQVV*
Ga0137379_116197532	3300012209	Vadose Zone Soil	GCNITRRASELTSLRCLGTRTREESIQKVLQMAVAWCHWCYFPREGIDFSVISCSQQVV*
Ga0137378_118188241	3300012210	Vadose Zone Soil	TGCNITRRASGLTSLRCLGTRMTEESVEKVMQMAVDVFHWCYLPRKGIDFCLVSCSQQVLGLLTGPSHGL*
Ga0150985_1148385601	3300012212	Avena Fatua Rhizosphere	VDTGCARGLGNITRRASGQTSLRCLGTRITEESTQKVLQMAVALCHWCYLPRKGIDCCLVSCSQHVFFMLTGPS
Ga0137372_111549091	3300012350	Vadose Zone Soil	MPSCNGMDTGCANCIGNITRRESGQTSLRCLGTRTTEESVEKVLQMAVDVFHWCYLPREGIDFCVVSCSQQVTLLLTGRPSHGLWDA*
Ga0137367_105516691	3300012353	Vadose Zone Soil	MTRHASELTSLRCLGTRTMEESIQKVLQMAVASCHWCYLPREGIDFCLVS
Ga0137384_108624861	3300012357	Vadose Zone Soil	MPPCNGEDTGCARSMGNITRRASGQTSLRCLGTRTTEESVEKVLQMAVAVFHWCYLPREGIDFCVVSCSQQVTLLLTGRPSHGLWDA*
Ga0137385_100621144	3300012359	Vadose Zone Soil	MPFCNGTDTGCNITRRASELTSLRCLGTRTTEESVQKVLQMSVALFHWCYLPREGIDLGSVSCSQQVTSLLTGPLHGL*
Ga0137385_113209811	3300012359	Vadose Zone Soil	DTGCNITRRASELTSLRCLGTRTRGESIQKVLQMAVAVCHWCYLPREGIDFSVVSCSQQVV*
Ga0137361_110607661	3300012362	Vadose Zone Soil	GNITRRASGQTSLRCLGTRTTEESVEKVLQMAVDVFHWCYLPREGIDFCVVSCSQQVTLLLTGRPSHGLWDA*
Ga0137361_113605991	3300012362	Vadose Zone Soil	GTDTGCNITRRESELTSLRCLGTRTTEESIQKVLQMSVALFHWCYLPRKGIDFGAVSYSQQVV*
Ga0134027_10575912	3300012364	Grasslands Soil	MPPCNGEDTGCARSMGNITRRASGQTSLRCLGTRTTEESVEKVLQMAVDVFHWCYLPREGIDFCVVSCSQQVV*
Ga0134058_12256771	3300012379	Grasslands Soil	DTGCNITRRESEQTSLRCLGTRTPEESTKKVLQMTVAFQHWCYLPRKGIDFCLLSCSQQAL*
Ga0134026_12356001	3300012381	Grasslands Soil	MGNITRRASGQTSLRCLGTRTTEESVEKVLQMAVDVFHWCYLPREGIDFCVVSCSQQ
Ga0134038_11156241	3300012382	Grasslands Soil	MPPCNGEDTGCARSMGNITRRASGQTSLRCLGTRTTEESVEKVLQMAVDVFHWCYLPREGIDFCVVSCSQQVT*
Ga0134054_11776371	3300012390	Grasslands Soil	CNGSDTGCNITRRASGLTSLRCLGTRMTEESVEKVMQMAVDVFHWCYLPRKGIDFCLVSCSQQVLGLLTGPSHGL*
Ga0134055_13852941	3300012401	Grasslands Soil	DTGCNITRRASGLTSLRCLGTRMTEESVEKVLQMAVDVFHWCYLPRKGIDFCLVSCSQQV
Ga0134041_13972551	3300012405	Grasslands Soil	MDTGCNITRRASELTSLRCLGTRTTEESTQKVLQMSVGLFHWCYLPRKGIDFGSVSYSQQVLRLLTGPFHGL
Ga0150984_1104798411	3300012469	Avena Fatua Rhizosphere	MPSCSGADTGCNITRRESGLTSLRCLDTRTTEESVQKVLQMAVALFHWCYLPRKGIDFGAVSYSQQVLRLLTGPSQGL*
Ga0150984_1196766841	3300012469	Avena Fatua Rhizosphere	RASGQTSLRCLGTRITEESTQKVLQMTVAVSHWCYLPRKGIDVCVVSCSQQVL*
Ga0157331_10409321	3300012486	Soil	GLGNITRRASGQTSRRCLGTRTTEESIEKVLQMAVALFHWCSLPRKGIDFCVVSCSQQVV
Ga0157296_101430541	3300012905	Soil	MAEGVEERRSKRRPPCNGADTGCANAFGNITRRASGQTSLRCLGTKTTEESVQKVLQMAVDVCHWCYLPRKGIDFCIVSCSQQVL*
Ga0126375_112187591	3300012948	Tropical Forest Soil	SELTSLRCLGTRTTEESIQKVLQMSVAWFHWCYLPRKGIDFGAVSYSQQVV*
Ga0126375_118568531	3300012948	Tropical Forest Soil	VVRVEGWKKRMPVCNGSDTGGNITRRASGQTSLRCLGTRITEESVEKVMQMAVDVFHWCYLPRKGIDFSVVSCSQQVT*
Ga0126369_117892971	3300012971	Tropical Forest Soil	GQTSRRCLGTRTTEESIEKVLHMAVAWFHWCSLPRKGIDFGAVSYSQQVV*
Ga0126369_124703611	3300012971	Tropical Forest Soil	SGQTSLRCLGTRITEESVEKVMQMAVDVFHWCYLPRKGIDCSVVSCSQQVT*
Ga0126369_132994001	3300012971	Tropical Forest Soil	MPSCNGRDTGCNITRRASEPTSLRCLGTKTIEELVQKVLQMSVDVFHWCSLPRKGINFYVVSCSQQVVNC*
Ga0157375_132760051	3300013308	Miscanthus Rhizosphere	RPPCNGVDTGCARGLGNITRRASGQTSRRCLGTRTTEESIEKVLQMAVALFHWCYLPRKGIDFGSVSYSQQVV*
Ga0182041_119832662	3300016294	Soil	SGNETDTGGARGLGNITRRASGQTSLRCLGTRTREEAIQKVWQMAVALCHWCSLPREGIDFCVVSCSQQVV
Ga0182035_115727881	3300016341	Soil	WRCGYGGGKKRRPSCSGTDTGGHITRRASELTSLRCLGTRTTEESRQKVLQMSVAWFHWCYLPRKGIDFGAVSYSQQVVGLLTGPSQGL
Ga0182035_121389061	3300016341	Soil	RTPFCNGTDTGGARGLGNITRRASGQTSLRCLGTRTREESLQKVLQMTVAVLHWCYLPRKGIDFCVVSCSQQVL
Ga0182032_108228372	3300016357	Soil	GTKRRPPRSGTDTGCTITRRASELTSLRWLGTRTTEESIEKVVQMSVASGHWGSLPRKGIDVCQVSCSQQVVGLLTGLSQGL
Ga0182038_110872462	3300016445	Soil	GNITRRASGQTSLRCLGTRTMEESVQKVLQMAVDVFHWCYLPRKGIDFCVVSCSQQVL
Ga0184637_100647091	3300018063	Groundwater Sediment	SGQTSLRCLGTRTTEESVQKVLQMSVALSHWCYLPRQGIDCCLVSCSQQVVLLLTGPSHGLREA
Ga0184618_102641152	3300018071	Groundwater Sediment	MPFCNGSDTGCNITRRESGLTSLRCLGTRTTEESVQKVLQMAVDVFHWCSLPRKGIDFCVVSCSQQVT
Ga0184633_102383241	3300018077	Groundwater Sediment	SGQTSLRCLGTRTTEESVQKVLQMSVALSHWCYLPRQGIDFCLVSCSQQVVLLLTGPSHGLREA
Ga0184612_102032521	3300018078	Groundwater Sediment	MPSCNGMDTGCANCIGNITRRESGQTSLRCLGTRTTEESVQKVLQMSVALFHWCYLPRKGIDFCVVSCSQQVV
Ga0180114_11529701	3300019232	Groundwater Sediment	MPSCHGMDTGCANGIGNMTRRASGQTSLRCLGTRPTEESVQKVLQMSVASLHWCYLPHKGIDQRRVSCSQH
Ga0210378_102387091	3300021073	Groundwater Sediment	MPLCSGADTGWNITRHASGLTSLRCLGTRTPEESTQKVWHMSVALLHWCSLPRTGIDVCLVSCSQQVVGLLTGPSPG
Ga0179585_11082651	3300021307	Vadose Zone Soil	MPSCNGTDMGCNITRRESEQTSLRCLGTRTPEESTQKVLQMTVALLHWCSLPRKGIDVCLVSCSQQVVSLLTGPSHGL
Ga0207684_100353097	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPSCNGTDTGCNITRRESAQTSLRCLGTRTIEESIQKVLQMTVAFLHWCYLPHKGIDVCLVSCSQQVVLLLTGPSHGL
Ga0209861_10204462	3300027332	Groundwater Sand	VKPLTRRESAQTSLRCLGTRTPEESVQRVLQMSVDVFHWCYLPRKGIDFCLVSCSQQVV
Ga0209899_10024184	3300027490	Groundwater Sand	MPSCSGADTGCNITRRASGLTSLRCLGTRTPEESVQRVLQMSVDVFHWCYLPRKGIDFWLVSCSQHVFPMLTGPSHGL
Ga0209814_101068832	3300027873	Populus Rhizosphere	LCNGVDTGCARSVGNITRRASGQTSLRCLGTRTMEESIQKVLQMTVASGHWCYLPRKGIDVCQVSCSQQVVRLLPGLSQGL
Ga0209382_109554651	3300027909	Populus Rhizosphere	GNITRRASGQTSLRCLGTRTTEESVQKVLQMAVALCHWCYLPRKGIDFCLVSCSQQVVDC
Ga0209382_110861852	3300027909	Populus Rhizosphere	ANAFGNITRRASGQTSLRCLGTRITEESAQKVLQMTVAVSHWCYLPRKGIDVWVVSCSQQVL
Ga0209382_121904092	3300027909	Populus Rhizosphere	GNITRRASGQTSLRCLGTRTTEESVQKVLQMAVDVFHWCDLPRKGIDFCVVSCSQQVV
Ga0209526_101707291	3300028047	Forest Soil	MPPCNGVDTGCNITRRESGLTSLRCLDTRTREESIQKVLQMSVACFTGATFPHTGIDFEAVSCSQQVLSLLTGPSHGLSRCLSRMKGNFHVRF
Ga0302046_111726932	3300030620	Soil	TATGGNIPRRASGLTALRCLGTRTTEELIEKVLHMSVDSFHWCDLPRQGINFCLVSCRQQVVGLLTGPSHGL
Ga0308203_10205191	3300030829	Soil	MVGYGGGKKRRPPCNGGDTGCARGLGNITRRASGQTSLRCLGTRTTEESVQKVLQMAVDVFHWCYLPREGIDFSVVSCSQQVV
Ga0308178_10274701	3300030990	Soil	VDTGCARGLGNITRRASGQTSLRCLGTRTTEESVQKVLQMSVACHWCSLPRKGIDFCLVS
Ga0308181_10576212	3300031099	Soil	MPSCSGADTGCNITRRESELTSLRCLGTRTTEESIQKVLQMSVALFHWCYLPRKGIDFGAVSYSQQVV
Ga0308187_102250461	3300031114	Soil	ITRRESAQTSLRCLGTRTIEESIQKVLQMTVAFLHWCYLPRKGIDVCLVSCSQQVL
Ga0318528_107276711	3300031561	Soil	DTDCASGLGNIIRRASGQTSLRCLGTRTMEESIQKVLQMTVASGHWCYLPRKGIDVCQVSCSQQVVGLLTGLSQGL
Ga0310886_101649642	3300031562	Soil	MPPCSGADTGCNITRRESGLTSLRCLDTRTMEESTQKVLQMSVACHWCYLPRKGIDFYVTNGVSLLQTIQYS
Ga0318573_104092811	3300031564	Soil	SGADTGGHITRRASELTSLRCLGTRTTEESIQKVLQMAVALFHWCYLPRTGIDFGAVSYSQQVVGLLTGPSQGLRDA
Ga0310915_109083831	3300031573	Soil	GADTGCNMTRRASGLTSLRCLGTRTIEESIEKVLQMAVASLHWCYLPRKGIDLDPVSYSQQVVGLLTGPSPGL
Ga0307473_102304771	3300031820	Hardwood Forest Soil	MGGNITRRASEPTSLRCLGTKTIEELVQKVLQMSVAVCHWCYLPRKGINFYVVSCSQQVVNC
Ga0310917_105430021	3300031833	Soil	GGKKRMPSCSGTDTGCNITRRASELTSLRCLGTRTTEESIQKVLQMAVALFHWCYLPRKGIDFGAVSYSQQVVGLLTGPSQGLRDA
Ga0307406_106927381	3300031901	Rhizosphere	MPPGNGEDTGGARRTGNITRRASGQTSLRCLGTRTPEESVQKVLQMAVDEFHWCYLPRKGIDFCVVSCSQQGTLLLTGRPSHGF
Ga0307406_118123352	3300031901	Rhizosphere	GLGNITRRASGQTSLRCLGTRTREESIQKVWQMTVASGHWCYLPRKGIDVCQVSCSQQVVGLLTGLSQGL
Ga0310912_102167251	3300031941	Soil	TDTGGHITRRASELTSLRCLGTRTTEESRQKVLQMSVAWFHWCYLPRKGIDFGAVSYSQQVVGLLTGPSQGL
Ga0310902_113069461	3300032012	Soil	MDTGCNITRRESELTSLRCLGTRTTEESIQKVLQMSVALFHWCYLPRKGIDFGAVSYSQQVV
Ga0318507_103387511	3300032025	Soil	CSGADTDCNMTRRASGLTSLRCLGTRTIEESIEKVLQMAVASLHWCYLPRKGSDLDPVSYSQQVVGLLTGPSPGL
Ga0310889_107683912	3300032179	Soil	NAFGNITRRASGQTSLRCLGTRITEESTQKVLQMTVAVSHWCYLPRKGIDFCVVSCSQQV
Ga0307472_1010104591	3300032205	Hardwood Forest Soil	MPPCSGVDTGCARSLGNMTRRASGLTSLRCLDTRTREESVQKVLQMSVAWSHWCYLPREGIDFSVVS
Ga0307472_1012719871	3300032205	Hardwood Forest Soil	RDTGGNITRRASEPTSLRCLGTKTIEELVQKVLQMSVAVCHWCYLPRKGINFYVVSCSQQVVNC
Ga0310914_118369241	3300033289	Soil	QTSLRCLGTRITEESTQKVLQMTVAVSHWCYLPRKGIDFCVVSCSQQVL
Ga0364934_0332260_420_575	3300034178	Sediment	MILRASGQTSVWCLGTKTTEESTQKVLHMTVALLHWCYLPHTGIDCRPVSCS
Ga0314781_040074_530_775	3300034660	Soil	MPSCSEMDTGCNITRRESELTSLRCLGTRTTEESIQKVLQMSVALFHWCYLPRKGIDLGAVSYSQQLVLLLTGLSYGLRDA
Ga0314782_113910_7_234	3300034661	Soil	MDTGCNITRRESELTSLRCLGTRTTEESIQKVLQMSVALFHWCYLPRKGIDLGAVSYSQQLVLLLTGLSYGLRDA
Ga0314783_086823_429_647	3300034662	Soil	ADTGCNSTRRESGLTSLRCLGTRTIEESVQKVLQMAVALFHWCYLPRQGIDFGSVSYSQQVLRLLTGPSHGL
Ga0314784_145384_1_234	3300034663	Soil	MPPCNGTDTGCNITRRESEQTSLRCPGTRTPEESTQKVLQMSVVFHWCYLPREGIDFCPVSYSQQVMGLLTGPSHGLW
Ga0370541_003025_504_752	3300034680	Soil	MPPCNGTDTGCNIIRRESGLTSLRCPDTRTTEESVQKVLHMTVDMFHWCYLPRKGIDVCLVSCSQQVLGLLTGRPSHGLWDA
Ga0370541_008547_351_557	3300034680	Soil	MPSCSGADTGCNITRRESELTSLRCLGTRTTEESIQKVLQMSVALFHWCYLPRKGIDFGSVSYSQQVV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052691

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences