Metagenome / Metatranscriptome Family F052532

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052532
Family Type	Metagenome / Metatranscriptome
Number of Sequences	142
Average Sequence Length	73 residues
Representative Sequence	MPRNNDEPLPESGMGGASDAGAHGVHPASAMRVEGSPLPDDAPGDAPIERRRHRDSNYRGPERRIGGTKHRD
Number of Associated Samples	100
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	89.29 %
% of genes near scaffold ends (potentially truncated)	19.72 %
% of genes from short scaffolds (< 2000 bps)	61.27 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.16

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (69.014 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.310 % of family members)
Environment Ontology (ENVO)	Unclassified (23.239 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.521 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.00% β-sheet: 0.00% Coil/Unstructured: 94.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.16
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.16
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF00753	Lactamase_B	30.99
PF04214	DUF411	9.86
PF00583	Acetyltransf_1	9.15
PF04226	Transgly_assoc	4.93
PF13672	PP2C_2	4.23
PF13508	Acetyltransf_7	3.52
PF00664	ABC_membrane	1.41
PF01293	PEPCK_ATP	1.41
PF16697	Yop-YscD_cpl	0.70
PF01966	HD	0.70
PF01906	YbjQ_1	0.70
PF07228	SpoIIE	0.70
PF00282	Pyridoxal_deC	0.70
PF00005	ABC_tran	0.70
PF00892	EamA	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG3019	Uncharacterized metal-binding protein, DUF411 family	Function unknown [S]	9.86
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	4.93
COG1866	Phosphoenolpyruvate carboxykinase, ATP-dependent	Energy production and conversion [C]	1.41
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.70
COG0393	Uncharacterized pentameric protein YbjQ, UPF0145 family	Function unknown [S]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.01 %
Unclassified	root	N/A	30.99 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.01 %
Unclassified	root	N/A	30.99 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.01 %
Unclassified	root	N/A	30.99 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	38.73 %
Unclassified	root	N/A	30.99 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.11 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	33.80 %
Unclassified	root	N/A	30.99 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.99 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	19.01 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	4.93 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.99 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	19.01 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4.23 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.70 %
Gemmatimonadetes bacterium 13_1_40CM_2_60_3	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.99 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	13.38 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	5.63 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4.23 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.70 %
Gemmatimonadetes bacterium 13_1_40CM_2_60_3	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.99 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	13.38 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4.23 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	2.82 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.70 %
Gemmatimonadetes bacterium 13_1_40CM_2_60_3	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.99 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	13.38 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4.23 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2.82 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.70 %
Gemmatimonadetes bacterium 13_1_40CM_2_60_3	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_10931709	Not Available	754	Open in IMG/M
3300002568\|C688J35102_118385594	Not Available	554	Open in IMG/M
3300002568\|C688J35102_120449206	All Organisms → cellular organisms → Bacteria → Proteobacteria	1078	Open in IMG/M
3300002568\|C688J35102_120705199	All Organisms → cellular organisms → Bacteria → Proteobacteria	1386	Open in IMG/M
3300003267\|soilL1_10005239	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	16291	Open in IMG/M
3300003267\|soilL1_10005240	All Organisms → cellular organisms → Bacteria	9820	Open in IMG/M
3300003267\|soilL1_10019745	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	3626	Open in IMG/M
3300003316\|rootH1_10118805	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4773	Open in IMG/M
3300004081\|Ga0063454_100123625	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300004081\|Ga0063454_100446094	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300004153\|Ga0063455_100028552	All Organisms → cellular organisms → Bacteria	1641	Open in IMG/M
3300004153\|Ga0063455_100331606	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300004156\|Ga0062589_101125693	All Organisms → cellular organisms → Bacteria → FCB group	745	Open in IMG/M
3300004156\|Ga0062589_102838212	Not Available	506	Open in IMG/M
3300004479\|Ga0062595_100797775	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	777	Open in IMG/M
3300005171\|Ga0066677_10567722	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	647	Open in IMG/M
3300005329\|Ga0070683_102163637	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300005341\|Ga0070691_10106530	All Organisms → cellular organisms → Bacteria	1398	Open in IMG/M
3300005341\|Ga0070691_10892930	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	548	Open in IMG/M
3300005440\|Ga0070705_101067716	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300005615\|Ga0070702_100394924	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300005840\|Ga0068870_11250869	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300005873\|Ga0075287_1037527	Not Available	643	Open in IMG/M
3300005874\|Ga0075288_1023058	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300005884\|Ga0075291_1017907	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300006755\|Ga0079222_10014276	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3000	Open in IMG/M
3300006876\|Ga0079217_10015322	All Organisms → cellular organisms → Bacteria	2585	Open in IMG/M
3300006881\|Ga0068865_102074633	Not Available	517	Open in IMG/M
3300009176\|Ga0105242_10492083	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1165	Open in IMG/M
3300009789\|Ga0126307_10003289	All Organisms → cellular organisms → Bacteria	11028	Open in IMG/M
3300009789\|Ga0126307_10289599	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1318	Open in IMG/M
3300009840\|Ga0126313_10138285	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1828	Open in IMG/M
3300010036\|Ga0126305_10218862	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1213	Open in IMG/M
3300010037\|Ga0126304_10030913	All Organisms → cellular organisms → Bacteria	3147	Open in IMG/M
3300010038\|Ga0126315_10029532	All Organisms → cellular organisms → Bacteria	2841	Open in IMG/M
3300010039\|Ga0126309_10006002	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4738	Open in IMG/M
3300010039\|Ga0126309_10299339	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300010039\|Ga0126309_10453932	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	779	Open in IMG/M
3300010042\|Ga0126314_10183420	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1469	Open in IMG/M
3300010042\|Ga0126314_10246467	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1267	Open in IMG/M
3300010045\|Ga0126311_10030619	All Organisms → cellular organisms → Bacteria	3307	Open in IMG/M
3300010045\|Ga0126311_10243872	All Organisms → cellular organisms → Bacteria → FCB group	1330	Open in IMG/M
3300010045\|Ga0126311_11013873	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	679	Open in IMG/M
3300010145\|Ga0126321_1131328	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	571	Open in IMG/M
3300010145\|Ga0126321_1288434	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	676	Open in IMG/M
3300010146\|Ga0126320_1485087	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	518	Open in IMG/M
3300010166\|Ga0126306_10207289	All Organisms → cellular organisms → Bacteria → FCB group	1482	Open in IMG/M
3300010371\|Ga0134125_12666829	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	543	Open in IMG/M
3300010375\|Ga0105239_10247835	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2000	Open in IMG/M
3300010396\|Ga0134126_10314975	All Organisms → cellular organisms → Bacteria	1832	Open in IMG/M
3300010399\|Ga0134127_11119900	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300010399\|Ga0134127_12790001	Not Available	568	Open in IMG/M
3300011332\|Ga0126317_10067191	All Organisms → cellular organisms → Bacteria → FCB group	1399	Open in IMG/M
3300012212\|Ga0150985_104699440	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4306	Open in IMG/M
3300012212\|Ga0150985_107183475	All Organisms → cellular organisms → Bacteria	2466	Open in IMG/M
3300012212\|Ga0150985_111009817	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300012212\|Ga0150985_119419978	All Organisms → cellular organisms → Bacteria	1760	Open in IMG/M
3300012469\|Ga0150984_112869874	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1090	Open in IMG/M
3300012469\|Ga0150984_114018150	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	629	Open in IMG/M
3300012469\|Ga0150984_123009356	All Organisms → cellular organisms → Bacteria	3638	Open in IMG/M
3300012469\|Ga0150984_123221290	Not Available	546	Open in IMG/M
3300012897\|Ga0157285_10022340	All Organisms → cellular organisms → Bacteria → FCB group	1358	Open in IMG/M
3300012937\|Ga0162653_100004258	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1465	Open in IMG/M
3300012958\|Ga0164299_11663075	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	505	Open in IMG/M
3300012960\|Ga0164301_10555165	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	839	Open in IMG/M
3300012961\|Ga0164302_10090620	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1660	Open in IMG/M
3300014326\|Ga0157380_11229897	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	794	Open in IMG/M
3300014488\|Ga0182001_10441549	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300017789\|Ga0136617_10000106	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	57780	Open in IMG/M
3300018000\|Ga0184604_10186413	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	704	Open in IMG/M
3300018061\|Ga0184619_10252335	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	811	Open in IMG/M
3300018066\|Ga0184617_1034411	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1219	Open in IMG/M
3300018469\|Ga0190270_13020602	Not Available	532	Open in IMG/M
3300019269\|Ga0184644_1612523	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	523	Open in IMG/M
3300019279\|Ga0184642_1097038	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300019356\|Ga0173481_10150593	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300019361\|Ga0173482_10612534	Not Available	549	Open in IMG/M
3300019877\|Ga0193722_1000973	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	6640	Open in IMG/M
3300020202\|Ga0196964_10016892	All Organisms → cellular organisms → Bacteria	3019	Open in IMG/M
3300021078\|Ga0210381_10175032	Not Available	739	Open in IMG/M
3300025912\|Ga0207707_11668939	Not Available	500	Open in IMG/M
3300025921\|Ga0207652_10162269	All Organisms → cellular organisms → Bacteria	2004	Open in IMG/M
3300025937\|Ga0207669_10978758	Not Available	710	Open in IMG/M
3300025945\|Ga0207679_11549763	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	607	Open in IMG/M
3300026075\|Ga0207708_10095519	All Organisms → cellular organisms → Bacteria	2296	Open in IMG/M
3300026121\|Ga0207683_10274216	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1541	Open in IMG/M
3300027637\|Ga0209818_1022776	All Organisms → cellular organisms → Bacteria	1375	Open in IMG/M
3300027775\|Ga0209177_10100120	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300027787\|Ga0209074_10373178	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	591	Open in IMG/M
3300028707\|Ga0307291_1105735	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	703	Open in IMG/M
3300028718\|Ga0307307_10001506	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	5759	Open in IMG/M
3300028718\|Ga0307307_10167161	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	691	Open in IMG/M
3300028819\|Ga0307296_10476393	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	683	Open in IMG/M
3300028824\|Ga0307310_10409017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	674	Open in IMG/M
3300028828\|Ga0307312_11189122	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300028881\|Ga0307277_10207390	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300028884\|Ga0307308_10638018	All Organisms → cellular organisms → Bacteria → FCB group	511	Open in IMG/M
3300031058\|Ga0308189_10025244	All Organisms → cellular organisms → Bacteria	1448	Open in IMG/M
3300031058\|Ga0308189_10090454	All Organisms → cellular organisms → Bacteria → FCB group	949	Open in IMG/M
3300031091\|Ga0308201_10264992	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	598	Open in IMG/M
3300031093\|Ga0308197_10136581	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	772	Open in IMG/M
3300031421\|Ga0308194_10156763	Not Available	706	Open in IMG/M
3300031548\|Ga0307408_100057452	All Organisms → cellular organisms → Bacteria	2825	Open in IMG/M
3300031548\|Ga0307408_100073919	All Organisms → cellular organisms → Bacteria	2528	Open in IMG/M
3300031548\|Ga0307408_101150462	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	722	Open in IMG/M
3300031824\|Ga0307413_10009793	All Organisms → cellular organisms → Bacteria	4607	Open in IMG/M
3300031824\|Ga0307413_10907620	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	749	Open in IMG/M
3300031852\|Ga0307410_10022742	All Organisms → cellular organisms → Bacteria	3882	Open in IMG/M
3300031903\|Ga0307407_10607990	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	815	Open in IMG/M
3300031995\|Ga0307409_101360785	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300031995\|Ga0307409_102002544	Not Available	609	Open in IMG/M
3300032004\|Ga0307414_10327521	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	1306	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.06%
Host-Associated	Host-Associated	23.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.97%
Plants	Host-Associated → Plants	23.94%
Aquatic	Environmental → Aquatic	14.08%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.20%
Freshwater	Environmental → Aquatic → Freshwater	10.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.04%
Sediment	Environmental → Aquatic → Sediment	2.11%
Marine	Environmental → Aquatic → Marine	1.41%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.70%
Rhizome	Host-Associated → Plants → Rhizome	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.48%
Loam	Environmental → Terrestrial → Soil → Loam	11.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.27%
Ice	Environmental → Aquatic → Freshwater → Ice	5.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.52%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.82%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.11%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.41%
Sand	Environmental → Terrestrial → Soil → Sand	0.70%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.70%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.70%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.27%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.15%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	5.63%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	5.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.52%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.82%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.11%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.70%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.70%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.31%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	14.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	9.15%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	5.63%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	5.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.52%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	3.52%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	3.52%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.82%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.11%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.11%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	2.11%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.11%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.11%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.41%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.41%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.70%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.70%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.70%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.70%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003316	Sugarcane root Sample L1	Host-Associated	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005873	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301	Environmental	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300005884	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010146	Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012046	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ833 (21.06)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012678	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ288 (22.06)	Environmental	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300014310	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_TuleA_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300025795	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_109317092	3300000363	Soil	MARRNDNDALPESGMGGSSDSGAHGRHPASAAKLDRSPLPDDVPGDAAIERRRHHDPNYNGPERRVGVGERES*
C688J35102_1183855942	3300002568	Soil	MARRDDDALPESAMGGSSDAGAHGVHPASAARVPDPLPDDVPGDAAIERRHHRDPNYNGPERRIGPGERDY
C688J35102_1204492063	3300002568	Soil	MARRNDDALPESAMGGSSDAGAHGVHPASAARVPDPLPDDVPGDAAIERRHHRDPNYNGPERRIGPGERDY*
C688J35102_1207051993	3300002568	Soil	MPHNHDEPLPESGMGGATDAGAHGLHPASAMRVEGSPLPDDAPGDAPIERRRHRDSNYSGPERRIGGTKHRD*
soilL1_1000523911	3300003267	Sugarcane Root And Bulk Soil	VSDRNDNELPESAMGGASDAGAHGKHPASAAKLENRSPLPDEVPGDAAIERRRHQDSAYRGPERRLGEGRSSGP*
soilL1_1000524010	3300003267	Sugarcane Root And Bulk Soil	MTTPEDQTLPESGMGGASDAGAHGIHPASAAKVEGSPLPDDAVGDVPIERRRHHDAKYRGPERRIGAGQTRE*
soilL1_100197454	3300003267	Sugarcane Root And Bulk Soil	MERSDDRGPLPESGMGGASDAGAHGKHPASAARLDRSPLPEDVPGDAAIERRRHHDPAYRGPERRIGSST*
rootH1_101188054	3300003316	Sugarcane Root And Bulk Soil	VSDRNDNELPESAMGGTSDAGAHGKHPASAAKLENRSPLPDEVPGDAAIERRRHQDSAYRGPERRLGEGRSSGP*
Ga0055469_101857942	3300003999	Natural And Restored Wetlands	MTADNRDDPLPESGMGGASDAGAHGKHPASAARLDQSSVRPENAPGDATVERRHGPLDSYNGPERRLGRSGDSHAEN*
Ga0063454_1001236252	3300004081	Soil	MTERNEDGTLPESGMGGASDAGAHGMHPASAARLEGSPLPEDAPGDAPIERRRHRDQNYPGPERRIGATKHPA*
Ga0063454_1004460942	3300004081	Soil	MPRNNDESLPESGMGGASDAGAHGLHPASATRVEGSPLPDDAPGDATIERRRHRDSNYGGPERRIGGTKHGD*
Ga0063455_1000285521	3300004153	Soil	MARRDDDALPESAMGGSSDAGAHGVHPASAARVPDPLPDDVPGDAAIERRHHRDPNYNGPERRIGPGERDY*
Ga0063455_1003316061	3300004153	Soil	MTERNDEGTLPESGMGGASDAGAHGMHPASAARLEGSPLAEDAPGDAPIERRRHRDQNYPGPERRIGATKHPA*
Ga0062589_1011256932	3300004156	Soil	MPRNNDEPLPESGMGGASDAGAHGVHPASAMRVEGSPLPDDAPGDAAIERRRHRESNYSGPERRIGGTKHRD*
Ga0062589_1028382121	3300004156	Soil	MPRNNDEPLPESGMGGASDAGAHGVHPASAMRVEGSPLPEDARGDVPIERRRHRDSDYSGPERRIGGTKHRD*
Ga0063356_1036385351	3300004463	Arabidopsis Thaliana Rhizosphere	MSSHPRDPLPESAMGGASDAGAHGKHPASAAKLEDRSARPEDVLGDAAVERRRGGNHSYTGPERRLGRAGGSHAQD*
Ga0063356_1036385361	3300004463	Arabidopsis Thaliana Rhizosphere	MSFHSRDPLPESATGGASDAGARGKHPASAAKLEDGSARPEDVPGDAAVERRRGRNLSYTGPERRLGRVGGSHAQD*
Ga0062595_1007977751	3300004479	Soil	MPRNNDEPLPESGMGGASDAGAHGVHPASAMRVEGSPLPDDAPGDAPIERRRHRESNYSGPERRIGGTKHRD*
Ga0066677_105677221	3300005171	Soil	MAGTDRNNSSPESGMGGASDSGAHGKHPASAAKLDPRLARPEDAPGDAAIERRHHHDPNYGGPERRIGARK*
Ga0070683_1021636372	3300005329	Corn Rhizosphere	LAAKEVHMPRKNDEPLPESGMGGASDAGAHGVHPASAIRVEGSPLPDEAVGDAAIERRRHRDSNYSGPERRMGATKHRD*
Ga0070691_101065304	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MPRNNDEPLPESGMGGASDAGAHGVHPASAMRVEGSPLPDDAPGDAAIERRRHRESNYSGPERRIGGTK
Ga0070691_108929301	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MPRNNDEPLPESGMGGVSDAGAHGVHPASAMRVEGSPLPDDAPGDAPIERRRHRESNYSGPERRIGGTKHRD*
Ga0070705_1010677161	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MPRNNDEPLPESGMGGASDAGAHGVHPASAMRVEGSPLPDDAPGDAPIERRRHRESNYSGPERRIGGTKHRV*
Ga0070702_1003949243	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MPRNNDEPLPESGMGGVSDAGAHGVHPASAMRVEGSPLPDDAPGDAPIERRRHRESNYSGPERRIGG
Ga0068870_112508692	3300005840	Miscanthus Rhizosphere	MPRKNDEPLPESGMGGASDAGAHGVHPASAIRVEGSPLPDEAVGDAAIERRRHRDSNYSGPERRIGATKHRD*
Ga0075287_10375272	3300005873	Rice Paddy Soil	MERSDDRGPLPESGMGGASDAGAHGKHPASAARLDRSPLPEDVPGDAAIERRRQHDPDYRGPERRIGSS
Ga0075288_10230582	3300005874	Rice Paddy Soil	MERSDDRGPLPESGMGGASDAGAHGKHPASAARLDRSPLPEDVPGDAAIERRRHHDPDYRGPERRIGSSP*
Ga0075291_10179073	3300005884	Rice Paddy Soil	MERSDDRGPLPESGMGGASDAGAHGKHPASAARLDRSPLPEDVPGDAAIERRRHHDPDYRGPERRIGSS
Ga0079222_100142762	3300006755	Agricultural Soil	MTPYDDPLPESGMGGASDSGAHGRHPASAAKLDHRSPLPDDVPGDAAIERRHHHDPNYNGPERRLGPGAPES*
Ga0079217_100153223	3300006876	Agricultural Soil	MMNRNNRNGDSLPESAMGGSSDAGASGGHPAGSADAAREGRSPLPDDAPGDAAIERRRGHQPGFRGPERRMSDK*
Ga0068865_1020746331	3300006881	Miscanthus Rhizosphere	MPRNNDEPLPESGMGGASDAGAHGVHPASAMRVAGSPLPDDAPGDAPIERRRHRESNYSGPERRIGGTKHRD*
Ga0079215_115738151	3300006894	Agricultural Soil	TGENDMGSHKDDALPESAMGGASDAGAHGNHPASAAKLEGRSARPEDVPGDAAVERRHGVDSNYTGPERRLGRTGGSRVQT*
Ga0079216_103298722	3300006918	Agricultural Soil	MSANSHDPLPESAMGGASDAGAHGNHPASAAKLEHRSARPEDAAGDAAVERRHHADSNYHGPERRMGRTGGSRAES*
Ga0105242_104920831	3300009176	Miscanthus Rhizosphere	MPRNNDEPLPESGMGGASDAGAHGVHPASAMRVEGSPLPDDAPGDAPIERRRHRESNYSGPERRIGGTKRWD*
Ga0126307_100032898	3300009789	Serpentine Soil	MSRDNDGPLPESGMGGASDAGAHGVHPASGVRVEGSPRPEDAPGDVPIERRRHRDSNYSGPERRIGGTKHRE*
Ga0126307_101483492	3300009789	Serpentine Soil	MSGHTDDALPESAMGGASDTGAHGNHPASAAKLEGRSARPEDVPGDAAVERRHRVDSNYTGPERRLGRRGGSRVQT*
Ga0126307_102895992	3300009789	Serpentine Soil	MARNNEDESLPESGMGGASDAGAHGIHPASAAKLEGRSALPDDVPGDAAIERRHHRDSNYNGPERRIGAAGRLPREE*
Ga0126313_101382852	3300009840	Serpentine Soil	MPRDKEDGPLPESAMGGASDAGAHGVHPASAVRVEGSPRPEDAPGDVPIERRRHRDNNYSGPERRIGGKKHRE*
Ga0126305_101586473	3300010036	Serpentine Soil	MSGHTDEALPESAMGGASDTGAHGNHPASAAKLEGRSARPEDVPGDAAVERRHRVDSNYTGPERRLGRRGGSRVQT*
Ga0126305_102188622	3300010036	Serpentine Soil	MPRENDGPLPESAMGGASDAGAHGVHPASAARVEGSPRPEDAPGDVPIERRRHRDNNYSGPERRIGGTKHPE*
Ga0126304_100309136	3300010037	Serpentine Soil	MPRENDGPLPESAMGGASDAGAHGVHPASAVRVEGSPRPEDAPGDVPIERRRHRDNNYSGPERRIGGTKHPE*
Ga0126304_105657082	3300010037	Serpentine Soil	MSGHTDEALPESAMGGASDTGAHGNHPASAAKLEGRSARPEDVPGDAAVERRHGVDSNYTGPERRLGRRGGSRVQT*
Ga0126315_100295324	3300010038	Serpentine Soil	MPRDKDAPLPESAMGGASDAGAHGVHPASAVRVEGSPRPEDAPGDVPIERRRHRDNNYSGPERRIGGKKHRE*
Ga0126309_100060022	3300010039	Serpentine Soil	MTERNEDGTLPESGMGGASDAGAHGLHPASATRLEGSPLPDDAPGDAPIERRRRRDENYPGPERRIGATAHPA*
Ga0126309_100284553	3300010039	Serpentine Soil	MSPNSHDPLPESGMGGASDAGAHGNHPASAAKLEHRSARPEDAPGDAAVERRHRADPDYRGPERRIGRGGGSRAQD*
Ga0126309_102993391	3300010039	Serpentine Soil	MERRHEDETLPESGMGGASDAGAHGVHPASAAHLERSPLPEDVPGDAAIERRRHRDVNYAGLERRIASTKTGE*
Ga0126309_104539322	3300010039	Serpentine Soil	MNERNEDSTLPESGMGGASDAGAHGTHPASAARVPSPLPEEALGDAPIERRRHRDDGYAGPERRIGGTK*
Ga0126309_105675023	3300010039	Serpentine Soil	MSSHTDDALPESAMGGASDAGAHGNHPASAAKLEGRSARPEDVPGDAAVERRHSIDSNYTGPERRLGRTGGSRVQP*
Ga0126312_100415384	3300010041	Serpentine Soil	MSRSSDDSLPESGMGGASDAGAHGTHPASAARLDSHSARPEDAPGDAPVERRRRQDPNYNGPERRLGRSGGTRAQD*
Ga0126314_101834203	3300010042	Serpentine Soil	MTDRNEDGTLPESGMGGASDAGAHGVHPASATRLEGSPLPDEAPGDAPIERRRHRDENYRGPERRIGATAYPA*
Ga0126314_102464672	3300010042	Serpentine Soil	MPRDNDGPLPGSAMGGASDAGAHGVHPASAVRVEGSPRPEDAPGDVPIERRRHRDNNYSGPERRIGGTKHPE*
Ga0126311_100306195	3300010045	Serpentine Soil	MPRDKDGPLPESAMGGASDAGAHGVHPASAVRVEGSPRPEDAPGDVSIERRRHRDNNYSGPERRIGGTKHRE*
Ga0126311_102438722	3300010045	Serpentine Soil	MTDRNEDGTLPESGMGGASDAGAHGVHPASATRLEGSPLPDDAPGDAPIERRRHRDENYRGPERRIGATAYPA*
Ga0126311_110138732	3300010045	Serpentine Soil	MTRDNEDESLPESAMGGASDAGAHGMHPASAARLEGRSPLPEDAPGDAAIERRHHRDSNYKGPERRIGAGNTTD*
Ga0126321_11313281	3300010145	Soil	VSDRNDNELPESAMGGASDAGAHGSHPASAAKLENRSPLPDDVPGDAAIERRHHHDSDYRGPERRI
Ga0126321_12884341	3300010145	Soil	MNRRDDESLPESGMGGASDAGAHGVHPASATRVPRPLPDEAPGDAPIERRHHHDENYTGPERRIGGYQHRD*
Ga0126320_14850871	3300010146	Soil	MMNDDRRQPSDPLPESAMGGASDAGASGGHPASAPALAQEHRPAAPDDVPGDATVERRHRHDPNYRGPE
Ga0126306_102072892	3300010166	Serpentine Soil	MAQRDNDETLPESGMGGASDAGAHGLHPASAARFEDRSPLPDDAPGDAAIERRHHRDSNYKGPERRIGAAKTRD*
Ga0134125_126668291	3300010371	Terrestrial Soil	MPRNNDEPLPESGMGGASDAGAHGVHPASAMRVEGSPLPDDAPGDAPIERRRHRESNYSGPERRIG
Ga0105239_102478351	3300010375	Corn Rhizosphere	MPRNNDEPLPESGMGGASDAGAHGVHPASAMRVEGSPLPDDAPGDAPIERRRHRESNYSGPERRIGGTKNRD*
Ga0134126_103149752	3300010396	Terrestrial Soil	MTPYDDPLPESGMGGASDSGAHGRHPASAAKLEDRSPLPDDVPGDAAIERRHHHDPNYNGPERRLGPGAPES*
Ga0134127_111199003	3300010399	Terrestrial Soil	MTPYDDPLPESGMGGASDSGAHGRHPASAAKLDHRSPLPDDVPGDAAIERRHHHDSNYNGPERRLGRGAPES*
Ga0134127_127900012	3300010399	Terrestrial Soil	MPRNNDEPLPESGMGGASDAGAHGVHPASAMRVEGSPLPDDAPGDAPIERRRHRESDYSGPERRIGGTKHRV*
Ga0126317_100671912	3300011332	Soil	MPRNNDEPLPESGMGGASDAGAHGVHPASAMRVEGSPLPDDAPGDAPIERRRHRDSNYRGPERRIGGTKHRD*
Ga0136634_101282431	3300012046	Polar Desert Sand	MTTNNAGETFPESAMGGASDAGAHGKHPASAAKLEQGSARPEDAVGDAATERRRERDRIYNGPERRIGRAGGLRESGAASS*
Ga0150985_1046994404	3300012212	Avena Fatua Rhizosphere	MTERNEDGTLPESGMGGASDAGAHGMHPASAARLEGSPLPEDAPGDAPIERRRHRDQDYPGPERRIGATKHPA*
Ga0150985_1071834751	3300012212	Avena Fatua Rhizosphere	MPRNSDESLPESGMGGASDAGAHGLHPASATRVEGSPLPDDAPGDATIERRRHRDSNYGGPERRIGGTKHRD*
Ga0150985_1110098172	3300012212	Avena Fatua Rhizosphere	MPRNNDEPSPESGMGGASDAGAHGVHPASAIRVEGSPLPDDAPGDAPIERRRHRDSNYSGPERRIGGTKHRD*
Ga0150985_1194199785	3300012212	Avena Fatua Rhizosphere	DDALPESAMGGSSDAGAHGVHPASAARVPDPLPDDVPGDAAIERRHHRDPNYNGPERRIGPGERDY*
Ga0150985_1220915842	3300012212	Avena Fatua Rhizosphere	LHLRKSEAKEKMMSTHSDDSLPESGMGGASDAGAHGTHPASAARLDPRSARPEDAPGDAAVERRHRQDPNYNGPERRLGHSGGSRAQD*
Ga0150984_1061382311	3300012469	Avena Fatua Rhizosphere	MMNDDRRQPSDPLPESAMGGASDAGASGGHPASAPALAQEHRPAAPDDVPGDAAVERRHRHDPNYRGPERRMAAA*
Ga0150984_1128698743	3300012469	Avena Fatua Rhizosphere	MPHNHDEPLPESGMGGASDAGAHGLHPASAMRVEGSPLPDDAPGDAPIERRRHRDSNYSGPERRIGGTKHRD*
Ga0150984_1140181502	3300012469	Avena Fatua Rhizosphere	DMPRNNDEPLPESGMGGASDAGAHGVHPASATRVEGSPLPDDAPGDAPIERRRHRESNYSGPERRIGGTKHRD*
Ga0150984_1230093563	3300012469	Avena Fatua Rhizosphere	MTERNEDGTLPESGLGGASDAGAHGMHPASAARLEGSPLPEDAPGDAPIERRRHRDQDYPGPERRIGATKHPA*
Ga0150984_1232212902	3300012469	Avena Fatua Rhizosphere	MARRNDDALPESAMGGSSDAGAHGVHPASAARVPDPLPDDVPGDAAIERRHHRDSNYNGPERRIGPGQRDY*
Ga0136615_100100563	3300012678	Polar Desert Sand	MTTDNAGDVFPESGMGGASDAGAHGKHPASAAKLEQISARPKDAPGDAAIERRRERDRNYNGPERRIGRAGGSRESGAAPS*
Ga0136613_103485302	3300012681	Polar Desert Sand	MTTDNAGDVFPESGMGGASDAGAHGKHPASAAKLEQISARPKDAPGDAAIERRRERDRNYNGPERRIGRAGGPRESGAAPS*
Ga0136614_102867832	3300012684	Polar Desert Sand	MTRHPSDDLPESAMGGASDAGAHGKHPASAAKLEHRSARPDDVPGDAAIERRHHAESNYDGPERRQGRSGGSHA*
Ga0157285_100223402	3300012897	Soil	MPRNNDEPLPESGMGGASDAGAHGVHPASAMRVEGSPLPEDAPGDVPIERRRHRESNYSGPERRIGGTKHRD*
Ga0162653_1000042583	3300012937	Soil	MARRNDNDALPESGMGGSSDSGAHGMHPASAAKLEHRSPLPDDAPGDAAIERRHHRDPNYNGPERRVGVGERNG*
Ga0164299_116630752	3300012958	Soil	MPRNNDEPLPESGMGGASDAGAHGVHPASAMRVEGSPLPDDAPGDAPIERRRHRESNYSGPE
Ga0164301_105551652	3300012960	Soil	MPRNNDEPLPESGMGGASDAGAHGVHPASAMRVEGSPLPDDAPGDTPIERRRHRESNYSGPERRIGGTKHRG*
Ga0164302_100906205	3300012961	Soil	MPRNNDEPLPESGMGGASDAGAHGAHPASAMRVEGSPLPDDAPGDAPIERRRHRESNYSGPERRIGG
Ga0075331_11610652	3300014310	Natural And Restored Wetlands	MSSDSRDPLPESAMGGASDAGAHGKHPASAAKLQDRSARPEDVPGDAAVERRHGRNSNYTGPERRLGRAGGSHAPD*
Ga0157380_112298971	3300014326	Switchgrass Rhizosphere	RNNDEPLPESGMGGSSDAGAHGVHPASAMRVEGSPLPEDARGDVPIERRRHRESNYSGPERRIGGTKHRD*
Ga0182001_104415492	3300014488	Soil	LAVPEREVMMPRDDNESLPDSAMGGASDAGAHGPHPASATKLNRSPLPDDAPGDAAIERRRHRDSDYRGPERRMGSIKPNAG*
Ga0180121_100000806	3300017695	Polar Desert Sand	MSTQSDNPLPESAMGGASDAGAHGKHPASAAKLEHRSARPDDVPGDAAIERRQHAESNYDGPERRQGRSGGPHA
Ga0183260_100140434	3300017787	Polar Desert Sand	MNRAIVSQEEIMTRHPSDDLPESAMGGASDLGAHGKHPASAAKLDQRSARPEDVPGDAAVERRHNRDQAYRGPERRVGGSSAEP
Ga0136617_1000010641	3300017789	Polar Desert Sand	MTRHPSDDLPESAMGGASGLGAHGKHPASAAKLDQRSARPEAVPGDAAVERRHNRDQAYRGPERRVGGSSAEA
Ga0136617_103638462	3300017789	Polar Desert Sand	MSTQSDNPLPESAMGGASDAGAHGKHPASAAKLEHRSARPDDVPGDAAIERRHHAESNYDGPERRQGRSGGSHA
Ga0184604_101864132	3300018000	Groundwater Sediment	MIRSNDGDPLPESAMGGASDAGAHGKHPASAARLEGSPLPDDVLGDAAIERRHHHDSSYSGPERRVGAGAR
Ga0184619_102523352	3300018061	Groundwater Sediment	MAGTDRNNSLPESGMGGASDSGAHGSHPASAAKLDPRLARPEDAPGDAAIERRHHHDPNYGGPERRIGARK
Ga0184617_10344112	3300018066	Groundwater Sediment	MIRSNDGDPLPESAMGGASDAGAHGKHPASAARLEGSPLPDDVPGDAAIERRHHHDSNYRGPERRIGAGAR
Ga0190265_108941533	3300018422	Soil	MSIHNPGDPPPESGMGGASDAGAHGTHPASAARLKETSARPEDAPGDAAVERRKGQDRNYNGPERRLGRSGGSRAQD
Ga0190268_100674432	3300018466	Soil	MSANSHDPLPESAMGGASDAGAHGNHPASAAKLEHRSARPEDATGDAAVERRHHADSNYHGPERRMGRTGGSRAES
Ga0190268_106001382	3300018466	Soil	MSANSHDPLPESAMGGASDAGAHGIHPASAAKLEHSSARPEDAPGDAAVERRHGTDSDYHGPERRMGRTGGSRAHS
Ga0190268_107701662	3300018466	Soil	MSSHSRDPLPESAMGGASDAGAHGKHPASAAKLEDRSARPEDVPGDAAVERRHGRNLSYTGPERRLGRVGGSHAQD
Ga0190270_130206021	3300018469	Soil	MSSHRDDALPESAMGGASDAGAHGNHPASAAKLEGRSARPEDVPGDAAVERRHGVDSNYTGPERRL
Ga0184644_16125232	3300019269	Groundwater Sediment	MIRSNDGDPLPESAMGGASDAGAHGKHPASAARLEGSPLPDDVPGDAAIERRHHHDSN
Ga0184642_10970381	3300019279	Groundwater Sediment	MIRSNDGEPLPESAMGGASDAGAHGKHPASAARLEGSPLPDDVPGDAAIERRHHHDS
Ga0173481_101505931	3300019356	Soil	MPRNNDDPLPDSGMGGASDAGAHGVHPASAMRVEGSPLPDDAPGDAPIERRRHRESNYSGPERRIGGTKHLD
Ga0173482_106125342	3300019361	Soil	MPRNNDEPLPESGMGGASDAGAHGVHPASAMRVEGSPLPDDAPGDAPIERRRHRESNYSGPERRIGGTKHRD
Ga0193722_10009736	3300019877	Soil	MIRSNDGDPLPESAMGGASDAGAHGKHPASAARLEGSPLPDDVPGDAAIERRHHHDSNYSGPERRVGAGAR
Ga0196964_100168922	3300020202	Soil	MPRNEDENLPESAMGGAADAGAHGTHPASAARLDRSPLPDDAPGDAPVERRRHRDSNYRGPERRIGAMK
Ga0210381_101750323	3300021078	Groundwater Sediment	MARNDNDALPESGMGGSSDSGAHGMHPASAAKLEHRSPLPDDVPGDAAIERRHHHDPNYNGPERRVGA
Ga0210114_10652251	3300025795	Natural And Restored Wetlands	MTADNRDDPLPESGMGGASDAGAHGKHPASAARLDQSSVRPENAPGDATVERRHGPLDSYNGPERRLGRSGDSHAE
Ga0207707_116689392	3300025912	Corn Rhizosphere	LAAKEVDMPRNNDEPLPESGMGGASDAGAHGVHPASAMRVEGSPLPDDAPGDAPIERRRHRESNYSGPERRIGGTKHRD
Ga0207652_101622694	3300025921	Corn Rhizosphere	MPRNNDEPLPESGMGGASDAGAHGVHPASAMRVEGSPLPDDAPGDAAIERRRHRESNYSGPERRIGGTKHRD
Ga0207669_109787581	3300025937	Miscanthus Rhizosphere	MPRNNDEPLPESGMGGASDAGAHGVHPASAMRVEGSPLPDDAPGDAPIERRRHRESNYSGPERRI
Ga0207679_115497632	3300025945	Corn Rhizosphere	MPRNNDEPLPESGMGGASDAGAHGVHPASAMRVEGSPLPDDAPGDAPIERRRHRESNYSGPERRIGGTKHRV
Ga0207708_100955192	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MPRNNDEPLPESGMGGAADAGAHGVHPASAMRVEGSPLPDDAPGDAPIERRRHRESNYSGPERRIGGTKHRD
Ga0207683_102742163	3300026121	Miscanthus Rhizosphere	MPRNNDEPLPESGMGGASDAGAHGVHPASAMRVEGSPLPDDAPGDAAIERRRHRESNYSGPERRIGGTKHRV
Ga0209818_10227762	3300027637	Agricultural Soil	MMNRNNRNGDSLPESAMGGSSDAGASGGHPAGSADAAREGRSPLPDDAPGDAAIERRRGHQPGFRGPERRMSDK
Ga0209177_101001202	3300027775	Agricultural Soil	MTPYDDPLPESGMGGASDSGAHGRHPASAAKLDHRSPLPDDVPGDAAIERRHHHDPNYNGPERRLGPGAPES
Ga0209074_103731781	3300027787	Agricultural Soil	MTPYDDPLPESGMGGTSDSGAHGRHPASAAKLDHRSPLPDDVPGDAAIERRHHHDPNYNGPERRLGPGAPES
Ga0307291_11057351	3300028707	Soil	MIRSNDGDPLPESAMGGASDAGAHGKHPASAARLEGSPLPDDVPGDAAIERRHHHDSNYRGPER
Ga0307307_100015066	3300028718	Soil	MVRSNDGDPLPESAMGGASDAGAHGKHPASAAKLEGSPLPDDVPGDAAIERRHHHDSNYNGPERRVGAGAR
Ga0307307_101671612	3300028718	Soil	MAGTERNDSLPESGRGGASDAGAHGKHPASAAKLDPRSARPEDAPGDAAIERRHHHDSDYTGPERRIGGRRPR
Ga0307296_104763931	3300028819	Soil	MAGTERNDSLPESGMGGASDAGAHGKHPASAAKLDPRSARPEDAPGDAAIERRHHHDSDYTGPERRIGGRRPR
Ga0307310_104090172	3300028824	Soil	MTRFNDDTRLPESGMGGASDAGAHGKHPASAAKVGSPLPDDAVGDAPIERRHHRDPNYSGPERRIGAGDRARGDE
Ga0307312_111891222	3300028828	Soil	NFEEDFMARRNDDDIPPESGMGGSSDSGAHGLHPASAAKLDDPLPDDVPGDAAIERRHHHDANYNGPERRIGGGTRHGIT
Ga0307277_102073902	3300028881	Soil	MARRNDNDALPESGMGGSSDSGAHGKHPASAAKLEHQSPLPDDVLGDAAIERRHHHDPNYNGPERRVGVGERDS
Ga0307308_106380182	3300028884	Soil	DIPPESGMGGSSDSGAHGLHPASAAKLDDPLPDDVPGDAAIERRHHHDANYNGPERRIGGGTRHGTT
Ga0299907_100659295	3300030006	Soil	MSNNPGDSLPESAMGGASDAGAHGKHPASAAKLDSATARPESAPGDAVIERRRRHDSNYSGPERRLGRMGASHAQG
Ga0308189_100252443	3300031058	Soil	MIRSNDGDPLPESAMGGASDAGAHGKHPASAARLEGSPLPDDVPGDAAIERRHHHDSSYSGPERRVGAGAR
Ga0308189_100904542	3300031058	Soil	TMTRFNDDTRLPESGMGGASDAGAHGKHPASAAKVEGSPLPDDAVGDAPIERRHHRDPNYSGPERRIGAGDRARGDE
Ga0308201_102649921	3300031091	Soil	MSPHNDDRLSPDSAMGGASDAGAHGVHPASAVRVEESPLPDDAPGDAPIERRRHRDSSYSGPERRIGGAKHRE
Ga0308197_101365811	3300031093	Soil	MIRSNDGDPLPESAMGGASDAGAHGKHPASAARLEGSPLPDEVLGDAAIERRHHHDSNY
Ga0308194_101567632	3300031421	Soil	MARRNDDDILPESGMGGSSDSGAHGLHPASAAKLDDPLPDDVPGDAAIERRHHHDANYNGPERRIGGGTRHGIT
Ga0307408_1000206423	3300031548	Rhizosphere	MSANSHDPLPESAMGGASDAGAHGNHPASAASLKHRSARPEDAPGDSPVERRHHADSSYHGPERRMGRTGGSRAAS
Ga0307408_1000574524	3300031548	Rhizosphere	MNRRDEDPTLPESGMGGTSDAGAHGTHPASAARLERSPLPDDAPGDAAVERRRHRDTNYTGPERRMGAGKNPE
Ga0307408_1000739195	3300031548	Rhizosphere	MPRNQDESLPESGMGGAADAGAHGPHPASAAKLDRSALPDDAPGDAAVERRRHRDANYQGPERRLGAMKPNAG
Ga0307408_1011504622	3300031548	Rhizosphere	MSRRNQDELPESGMGGASDAGAHGNHPASAAKLDRSALPDHVPGDAAIERRHQQDANYRGPERRIGAT
Ga0307413_100097935	3300031824	Rhizosphere	MNRRDEDPTLPESGMGGTSDAGAHGTHPASAARLERSPLPDEAPGDAAVERRRHRDTNYTGPERRMGAGKNPE
Ga0307413_109076201	3300031824	Rhizosphere	MPRDKDAPLPESAMGGASDAGAHGVHPASAVRVEGSPRPEDAPGDVPIERRRHRDNNYSGPERRIGGTKHRE
Ga0307410_100227427	3300031852	Rhizosphere	MNRRDEDPTLPESGMGGTSDAGAHGTHPASAARLERSPLPDDAPGDAAVERRRHRDTNYTGPERRIGAGK
Ga0307410_100626214	3300031852	Rhizosphere	MSTNSHDPLPESAMGGASDAGAHGNHPASAAKLEHRSARPEDAPGDAAVERRRHADSDYHGPERRMGRTGGSRAES
Ga0307407_106079901	3300031903	Rhizosphere	MPRDKDGPLPESAMGGASDAGAHGVHPASAVRVEGSPRPEDAPGDVPIERRRHRDNNYSGPERRIGGTKHRE
Ga0307409_1010395181	3300031995	Rhizosphere	MNANPNDPLPESAMGGASDAGAHGNHPASAAKLEHRSARPEDAPGDAAVERRHGADSDYRGPERRMGRMRGSRAES
Ga0307409_1013607852	3300031995	Rhizosphere	MARSNKDDSLPESAMGGASDAGAHGKHPASAVRVEGSPLPDDVVGDAAIERRHHHDSNYNGPERRIGAGAR
Ga0307409_1020025442	3300031995	Rhizosphere	MSERNEDRTLPESGMGGVSDAGAHGMHPASAAKVEGSPLPDDAPGDAPIERRRHRDESYTGPERRMGATKHAS
Ga0307414_103275214	3300032004	Rhizosphere	MNRRDEDPTLPESGMGGTSDAGAHGTHPASATRLERSPLPDDAPGDAAVERRRHRDTNYTGPERRMGSGKNPE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052532

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences