Metagenome / Metatranscriptome Family F052531

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052531
Family Type	Metagenome / Metatranscriptome
Number of Sequences	142
Average Sequence Length	110 residues
Representative Sequence	MAKQALLAVATMLIIGGTIVECRAASGLRLTCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKRVK
Number of Associated Samples	123
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	11.43 %
% of genes near scaffold ends (potentially truncated)	41.55 %
% of genes from short scaffolds (< 2000 bps)	83.10 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.113 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (38.028 % of family members)
Environment Ontology (ENVO)	Unclassified (47.887 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.958 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 19.47% β-sheet: 26.55% Coil/Unstructured: 53.98%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF00067	p450	16.20
PF06725	3D	7.04
PF07886	BA14K	4.93
PF00180	Iso_dh	4.23
PF01042	Ribonuc_L-PSP	2.11
PF03562	MltA	1.41
PF07690	MFS_1	1.41
PF04392	ABC_sub_bind	1.41
PF03734	YkuD	1.41
PF03401	TctC	0.70
PF00550	PP-binding	0.70
PF06071	YchF-GTPase_C	0.70
PF12071	DUF3551	0.70
PF11453	DUF2950	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG2124	Cytochrome P450	Defense mechanisms [V]	16.20
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	2.11
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	1.41
COG2821	Membrane-bound lytic murein transglycosylase	Cell wall/membrane/envelope biogenesis [M]	1.41
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.41
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	1.41
COG0012	Ribosome-binding ATPase YchF, GTP1/OBG family	Translation, ribosomal structure and biogenesis [J]	0.70
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.11 %
Unclassified	root	N/A	47.89 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.11 %
Unclassified	root	N/A	47.89 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.11 %
Unclassified	root	N/A	47.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.89 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16.20 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.89 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.27 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.11 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.89 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.63 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2.11 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.41 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.70 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.70 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.89 %
unclassified Bradyrhizobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae	4.23 %
Hydrogenophaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga	2.11 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	1.41 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.41 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.70 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.70 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.89 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	4.23 %
unclassified Hydrogenophaga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → unclassified Hydrogenophaga	2.11 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1.41 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.41 %
Microvirga vignae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga vignae	0.70 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.70 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.89 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	4.23 %
Hydrogenophaga sp. T4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → unclassified Hydrogenophaga → Hydrogenophaga sp. T4	2.11 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1.41 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.41 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.70 %
Microvirga vignae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga vignae	0.70 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000816\|AF_2010_repII_A10DRAFT_1019866	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300001867\|JGI12627J18819_10219112	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300004633\|Ga0066395_10068810	All Organisms → cellular organisms → Bacteria	1624	Open in IMG/M
3300005332\|Ga0066388_100034224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4862	Open in IMG/M
3300005332\|Ga0066388_100121202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3138	Open in IMG/M
3300005332\|Ga0066388_100504546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1845	Open in IMG/M
3300005332\|Ga0066388_101590883	All Organisms → cellular organisms → Bacteria → Proteobacteria	1149	Open in IMG/M
3300005363\|Ga0008090_14453971	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300005436\|Ga0070713_100246549	All Organisms → cellular organisms → Bacteria	1628	Open in IMG/M
3300005764\|Ga0066903_101223479	All Organisms → cellular organisms → Bacteria	1396	Open in IMG/M
3300006052\|Ga0075029_100061994	All Organisms → cellular organisms → Bacteria → Proteobacteria	2184	Open in IMG/M
3300006052\|Ga0075029_100462666	All Organisms → cellular organisms → Bacteria → Proteobacteria	833	Open in IMG/M
3300006052\|Ga0075029_101113891	Not Available	549	Open in IMG/M
3300006059\|Ga0075017_100353289	All Organisms → cellular organisms → Bacteria → Proteobacteria	1095	Open in IMG/M
3300006102\|Ga0075015_100207899	All Organisms → cellular organisms → Bacteria → Proteobacteria	1045	Open in IMG/M
3300006102\|Ga0075015_100284125	Not Available	906	Open in IMG/M
3300006162\|Ga0075030_101100902	Not Available	625	Open in IMG/M
3300006755\|Ga0079222_10014896	All Organisms → cellular organisms → Bacteria	2955	Open in IMG/M
3300006800\|Ga0066660_10307260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	1269	Open in IMG/M
3300006804\|Ga0079221_10044315	All Organisms → cellular organisms → Bacteria	1963	Open in IMG/M
3300006854\|Ga0075425_100312649	All Organisms → cellular organisms → Bacteria	1808	Open in IMG/M
3300010046\|Ga0126384_11015798	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300010048\|Ga0126373_11009684	Not Available	897	Open in IMG/M
3300010358\|Ga0126370_10073934	All Organisms → cellular organisms → Bacteria	2264	Open in IMG/M
3300010359\|Ga0126376_10099153	Not Available	2217	Open in IMG/M
3300010360\|Ga0126372_10300367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1411	Open in IMG/M
3300010361\|Ga0126378_10768526	Not Available	1074	Open in IMG/M
3300010366\|Ga0126379_10163836	All Organisms → cellular organisms → Bacteria	2091	Open in IMG/M
3300010366\|Ga0126379_11514722	Not Available	776	Open in IMG/M
3300010398\|Ga0126383_10637283	Not Available	1140	Open in IMG/M
3300010863\|Ga0124850_1135652	Not Available	593	Open in IMG/M
3300010868\|Ga0124844_1058126	Not Available	1385	Open in IMG/M
3300010868\|Ga0124844_1274541	Not Available	582	Open in IMG/M
3300012181\|Ga0153922_1061525	Not Available	836	Open in IMG/M
3300012971\|Ga0126369_10019518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5415	Open in IMG/M
3300016294\|Ga0182041_11713272	Not Available	582	Open in IMG/M
3300016341\|Ga0182035_10154205	All Organisms → cellular organisms → Bacteria	1768	Open in IMG/M
3300016357\|Ga0182032_10087026	All Organisms → cellular organisms → Bacteria	2165	Open in IMG/M
3300016387\|Ga0182040_10162869	All Organisms → cellular organisms → Bacteria	1603	Open in IMG/M
3300016387\|Ga0182040_11754834	Not Available	531	Open in IMG/M
3300016422\|Ga0182039_12126983	Not Available	517	Open in IMG/M
3300016445\|Ga0182038_10019111	All Organisms → cellular organisms → Bacteria	4083	Open in IMG/M
3300016445\|Ga0182038_10756522	Not Available	849	Open in IMG/M
3300017822\|Ga0187802_10001478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6359	Open in IMG/M
3300017924\|Ga0187820_1000036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	22468	Open in IMG/M
3300017927\|Ga0187824_10278276	Not Available	587	Open in IMG/M
3300017928\|Ga0187806_1063682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1137	Open in IMG/M
3300017932\|Ga0187814_10110888	All Organisms → cellular organisms → Bacteria → Proteobacteria	1014	Open in IMG/M
3300017937\|Ga0187809_10417135	Not Available	514	Open in IMG/M
3300017959\|Ga0187779_10010209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5381	Open in IMG/M
3300017973\|Ga0187780_10478309	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300018089\|Ga0187774_10465913	Not Available	787	Open in IMG/M
3300020580\|Ga0210403_11312069	Not Available	552	Open in IMG/M
3300021405\|Ga0210387_10679462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga vignae	913	Open in IMG/M
3300021420\|Ga0210394_11579024	Not Available	553	Open in IMG/M
3300025928\|Ga0207700_11526618	Not Available	592	Open in IMG/M
3300026896\|Ga0207730_1015126	Not Available	657	Open in IMG/M
3300026909\|Ga0207858_1010006	Not Available	941	Open in IMG/M
3300026927\|Ga0207744_1015089	Not Available	731	Open in IMG/M
3300026959\|Ga0207852_1014273	Not Available	840	Open in IMG/M
3300026990\|Ga0207824_1016895	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300027039\|Ga0207855_1022868	Not Available	850	Open in IMG/M
3300027042\|Ga0207766_1009234	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300027680\|Ga0207826_1000986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8088	Open in IMG/M
3300027787\|Ga0209074_10127285	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300027824\|Ga0209040_10242762	All Organisms → cellular organisms → Bacteria → Proteobacteria	908	Open in IMG/M
3300027825\|Ga0209039_10095781	All Organisms → cellular organisms → Bacteria → Proteobacteria	1278	Open in IMG/M
3300027874\|Ga0209465_10411697	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300027898\|Ga0209067_10013721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4222	Open in IMG/M
3300027910\|Ga0209583_10146205	Not Available	962	Open in IMG/M
3300027911\|Ga0209698_10612264	Not Available	836	Open in IMG/M
3300027915\|Ga0209069_10073751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → unclassified Hydrogenophaga → Hydrogenophaga sp. T4	1622	Open in IMG/M
3300031057\|Ga0170834_101472915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1008	Open in IMG/M
3300031231\|Ga0170824_109659080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1315	Open in IMG/M
3300031446\|Ga0170820_15981650	Not Available	771	Open in IMG/M
3300031474\|Ga0170818_109705680	Not Available	779	Open in IMG/M
3300031544\|Ga0318534_10570592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	644	Open in IMG/M
3300031545\|Ga0318541_10474491	Not Available	700	Open in IMG/M
3300031546\|Ga0318538_10546578	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300031546\|Ga0318538_10734637	Not Available	536	Open in IMG/M
3300031561\|Ga0318528_10071122	All Organisms → cellular organisms → Bacteria	1791	Open in IMG/M
3300031572\|Ga0318515_10123625	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300031573\|Ga0310915_10818773	Not Available	654	Open in IMG/M
3300031668\|Ga0318542_10392351	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300031679\|Ga0318561_10618561	Not Available	596	Open in IMG/M
3300031681\|Ga0318572_10317468	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300031682\|Ga0318560_10191159	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300031682\|Ga0318560_10396059	Not Available	747	Open in IMG/M
3300031718\|Ga0307474_10134277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → unclassified Hydrogenophaga → Hydrogenophaga sp. T4	1862	Open in IMG/M
3300031719\|Ga0306917_10351682	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300031744\|Ga0306918_10214059	All Organisms → cellular organisms → Bacteria	1457	Open in IMG/M
3300031747\|Ga0318502_10141039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1369	Open in IMG/M
3300031753\|Ga0307477_10961843	Not Available	561	Open in IMG/M
3300031754\|Ga0307475_10220884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → unclassified Hydrogenophaga → Hydrogenophaga sp. T4	1516	Open in IMG/M
3300031764\|Ga0318535_10325105	Not Available	688	Open in IMG/M
3300031768\|Ga0318509_10565892	Not Available	634	Open in IMG/M
3300031769\|Ga0318526_10223545	Not Available	770	Open in IMG/M
3300031770\|Ga0318521_11009425	Not Available	510	Open in IMG/M
3300031781\|Ga0318547_10307060	Not Available	964	Open in IMG/M
3300031792\|Ga0318529_10029283	All Organisms → cellular organisms → Bacteria	2270	Open in IMG/M
3300031792\|Ga0318529_10458633	Not Available	593	Open in IMG/M
3300031794\|Ga0318503_10089577	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300031795\|Ga0318557_10046339	Not Available	1817	Open in IMG/M
3300031796\|Ga0318576_10079940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1467	Open in IMG/M
3300031798\|Ga0318523_10026710	All Organisms → cellular organisms → Bacteria	2578	Open in IMG/M
3300031805\|Ga0318497_10553880	Not Available	645	Open in IMG/M
3300031819\|Ga0318568_10983341	Not Available	521	Open in IMG/M
3300031821\|Ga0318567_10581892	Not Available	636	Open in IMG/M
3300031823\|Ga0307478_10089894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2360	Open in IMG/M
3300031833\|Ga0310917_10577846	Not Available	763	Open in IMG/M
3300031835\|Ga0318517_10151394	Not Available	1037	Open in IMG/M
3300031846\|Ga0318512_10474828	Not Available	633	Open in IMG/M
3300031879\|Ga0306919_10506631	Not Available	930	Open in IMG/M
3300031890\|Ga0306925_10771387	Not Available	1000	Open in IMG/M
3300031890\|Ga0306925_11773062	Not Available	592	Open in IMG/M
3300031893\|Ga0318536_10272573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	860	Open in IMG/M
3300031896\|Ga0318551_10444919	Not Available	740	Open in IMG/M
3300031897\|Ga0318520_10206242	Not Available	1161	Open in IMG/M
3300031910\|Ga0306923_11653493	Not Available	663	Open in IMG/M
3300031941\|Ga0310912_10077547	All Organisms → cellular organisms → Bacteria → Proteobacteria	2406	Open in IMG/M
3300031942\|Ga0310916_10844648	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300031945\|Ga0310913_10039675	All Organisms → cellular organisms → Bacteria	3034	Open in IMG/M
3300031945\|Ga0310913_10382590	Not Available	998	Open in IMG/M
3300031947\|Ga0310909_10091955	All Organisms → cellular organisms → Bacteria	2424	Open in IMG/M
3300031954\|Ga0306926_10188470	All Organisms → cellular organisms → Bacteria	2559	Open in IMG/M
3300031954\|Ga0306926_11722061	Not Available	714	Open in IMG/M
3300031959\|Ga0318530_10190585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	840	Open in IMG/M
3300031959\|Ga0318530_10476171	Not Available	518	Open in IMG/M
3300031962\|Ga0307479_10576663	Not Available	1107	Open in IMG/M
3300031981\|Ga0318531_10377135	Not Available	642	Open in IMG/M
3300032042\|Ga0318545_10221995	Not Available	677	Open in IMG/M
3300032043\|Ga0318556_10265016	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300032043\|Ga0318556_10587820	Not Available	581	Open in IMG/M
3300032044\|Ga0318558_10172543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1048	Open in IMG/M
3300032055\|Ga0318575_10561721	Not Available	579	Open in IMG/M
3300032059\|Ga0318533_11282776	Not Available	535	Open in IMG/M
3300032094\|Ga0318540_10120290	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300032261\|Ga0306920_100684104	All Organisms → cellular organisms → Bacteria	1513	Open in IMG/M
3300033290\|Ga0318519_10191458	Not Available	1163	Open in IMG/M
3300033290\|Ga0318519_10422637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	796	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.59%
Host-Associated	Host-Associated	1.41%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.21%
Aquatic	Environmental → Aquatic	13.38%
Plants	Host-Associated → Plants	0.70%
Fungi	Host-Associated → Fungi	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.21%
Sediment	Environmental → Aquatic → Sediment	7.75%
Freshwater	Environmental → Aquatic → Freshwater	5.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.70%
Mycelium	Host-Associated → Fungi → Mycelium	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.61%
Loam	Environmental → Terrestrial → Soil → Loam	15.49%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.75%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.63%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.70%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	57.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.04%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.23%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.11%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.11%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.70%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.70%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	38.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.97%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	7.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.04%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.52%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.11%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.11%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.70%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.70%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000816	Forest soil microbial communities from Amazon forest - 2010 replicate II A10	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026896	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 71 (SPAdes)	Environmental	Open in IMG/M
3300026909	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 23 (SPAdes)	Environmental	Open in IMG/M
3300026927	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 56 (SPAdes)	Environmental	Open in IMG/M
3300026945	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 55 (SPAdes)	Environmental	Open in IMG/M
3300026959	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 3 (SPAdes)	Environmental	Open in IMG/M
3300026990	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 73 (SPAdes)	Environmental	Open in IMG/M
3300027039	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14 (SPAdes)	Environmental	Open in IMG/M
3300027042	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 68 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A10DRAFT_10198661	3300000816	Forest Soil	LAIATMLVIGGTIVECRGASGLRLTCTGDLTNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTIDTPAETKCRIRATALPQTRRGADHRELYRVIDVLTVDKRVK*
JGI12627J18819_102191121	3300001867	Forest Soil	PKVDVPKVDIPKVDIPVDVAKQTVVAIATMLVISGAIVECRAASGLRLTCSGNLTNTREDGITLGQCDLNFLPVKDIDSIEDICGIPGTIDTPAENKCRIRATVSPQTSRAADHRELYRVLDVITVDKR*
Ga0066395_100688103	3300004633	Tropical Forest Soil	MAKQALLAIATMLVIGGTIVECRGASGLRLTCTGDLTNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTIDTPAETKCRIRATALPQTRRGADHRELYRVIDVLTVDKRVK*
Ga0066388_1000342241	3300005332	Tropical Forest Soil	LLDLPSSGQALDTAKIDIAKIEIPKIDMAKQSLLAIATVLVIGATIVECRAASGLRLTCSGNLTNTREEGLTLGQCDLNFLPVKDINAIEDICGTPGTIDTPSETKCRMRAMVSPQTSRAADHRELYRVLDVLTVDKR*
Ga0066388_1001212023	3300005332	Tropical Forest Soil	MPKTEIAKQTLVAMTTMLVVSGAIVEGRAASGLRLTCSGNLTNTREDGITLGQCDLNFLPVKDIDSIEDICGIPGTIDTPAETKCRIKATVSPQTSRATDHRELYRVLDVITVDKR*
Ga0066388_1005045463	3300005332	Tropical Forest Soil	MAKIDMAKQAPLAIAIALIMGGTIVECRAASGLRLTCSGNLTNTREDGLTLGQCDLNFLPVKDINAIEDICGIPGTIDSPTETKCRMRAMVSPQTNRAADHRELYRVIDVLTVDKR*
Ga0066388_1015908832	3300005332	Tropical Forest Soil	MAKQHGEAMTWRSNDMAKQALLAVATMLIIGGTIVECRAASGLRLTCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKRVKSERDWRSAIWHTSLPAILSVSP*
Ga0008090_144539712	3300005363	Tropical Rainforest Soil	MRLLLTLAQPRSIDIATTWRSNDMAKQALLAIATMLVIGGTIVECRGASGLRLTCTGDLTNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTIDTPAETKCRIRATASPQTRRGADHRELYRVIDVLTVDKRVK*
Ga0070713_1002465491	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSKIDMPKVDIPKVDIPKVDIPVDVAKRTVVAIATMLAISGAIVECRAASGLRLTCSGNLTNTREDGITLGQCDLNFLPVKDIDSIEDICGIPGTIDTPAENKCRIRATVSPQTSRAADHRELYRVLDVITVDKR*
Ga0066903_1012234792	3300005764	Tropical Forest Soil	MAKQALLAVATMLIIGGTIVECRAASGLRLTCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKRVK*
Ga0075029_1000619943	3300006052	Watersheds	MAKIEMAKIEMAKIEMAKIEMAKIDKAKQALIAIVTALVTGGTIVECSAASGLRLTCSGNLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPIETKCRIRATVSPQTSRAADHRELYRVLDVLTVDKR*
Ga0075029_1004626661	3300006052	Watersheds	SAASGLRLTCIGNLTNTREDGITLGQCDLNFLSVKDVNSIEDVCGIPGTIDTPSETKCRIKAAVSPQTSRAADHRELYRVLDVLTVDKR*
Ga0075029_1011138911	3300006052	Watersheds	MAKRAQIGIAAILVIGGTIAECSAASGLRLTCIGNLTNTREDGITLGQCDLNFLSVKDVNSIEDICGIPGTIDTPTETKCRIKATVSPQTSRAADHRELYRVLD
Ga0075017_1003532891	3300006059	Watersheds	MAKRAQIGIAAILVIGGTIAECSAASGLRLTCIGNLTNTREDGITLGQCDLNFLSVKDVNSIEDICGIPGTIDTPTETKCRIKATVSPQTSRAADHRELYRVLDVLTVDKR*
Ga0075015_1002078992	3300006102	Watersheds	MAKDMAKQALIGIVTVLVTGGTIVECSAASGLRLTCSGDLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPTETKCRIRATVSPQTSRAADHRELYRVLDVLTVDKR*
Ga0075015_1002841252	3300006102	Watersheds	LVIGGTIAECSAASGLRLTCIGNLTNTREDGITLGQCDLNFLSVKDVNSIEDICGIPGTIDTPTETKCRIKATVSPQTSRAADHRELYRVLDVLTVDKR*
Ga0075030_1011009022	3300006162	Watersheds	LVIGGTIAECSAASGLRLTCIGNLTNTREDGITLGQCDLNFLSVKDVNSIEDICGIPGTIDTPTETKCRIKATVLPQTSRAADHRELYRVPDVLTVDKR*
Ga0079222_100148963	3300006755	Agricultural Soil	MSKIDMPKVDVPKVDIPKVDIPVDVAKQTVVAIATMLVISGAIVECRAASGLRLTCSGNLTNTREDGITLGQCDLNFLPVKDIDSIEDICGIPGMIDTPAENKCRIRATVSPQTSRAADHRELYRVLDVITVDKR*
Ga0066660_103072602	3300006800	Soil	MAKQALIAIAGTLIIGGTIVECSAASGLRLACTGDLTNTREDGVTLGECDLNFLSLRQMTEIENVCGIAGTADSPAENQCRIRAVVSPDPSRAADHRKLYKVLDVLTVDKR*
Ga0079221_100443155	3300006804	Agricultural Soil	ISGAIVECRAASGLRLTCSGNLTNTREDGITLGQCDLNFLPVKDIDSIEDICGIPGTIDTPAENKCRIRATVSPQTSRAADHRELYRVLDVITVDKR*
Ga0075425_1003126493	3300006854	Populus Rhizosphere	MSKIDMPKVDVPKVDIPKVDIPVDVAKQTVVAIATMLVISGAIVECRAASGLRLTCSGNLTNTREDGITLGQCDLNFLPVKDIDSIEDICGIPGTIDTPAENKCRIRATVSPQTSRAADHRELYRVLDVITVDKR*
Ga0126384_110157983	3300010046	Tropical Forest Soil	HGEATTWRSNDMAKQALLAIATMLVIGGTIVECRGASGLRLTCTGDLTNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTIDTPAETKCRIRATASPQTRRGADHRELYRVIDVLTVDKRVK*
Ga0126373_110096841	3300010048	Tropical Forest Soil	LPSSGQALDTAKIDIAKIEIPKIDMAKQSLLAIATVLVIGATIVECRAASGLRLTCSGNLTNTREEGLTLGQCDLNFLPVKDINAIEDICGTPGTIDTPSETKCRMRAMVSPQTSRAADHRELYRVLDALTVDKR*
Ga0126370_100739344	3300010358	Tropical Forest Soil	MAKIDMAKQAPLAIAIALIMGGTIVECRAASGLRLTCSGNLTNTREDGLTLGQCDLNFLPVKDINAIEDICGTPGTIDTPSETKCRMRAMVSPQTNRAADHRELYRVIDVLTVDKR*
Ga0126376_100991532	3300010359	Tropical Forest Soil	MAKQALLAIATMLVIGGTIVECRGASGLRLTCTGDLTNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKRVK*
Ga0126372_103003672	3300010360	Tropical Forest Soil	MTWRSNDMAKQALLAVATMLIIGGTIVECRAASGLRLTCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTPDTPAETKCRIRATVSPQTRRGAD
Ga0126378_107685261	3300010361	Tropical Forest Soil	LPSSGQALDTAKIDIAKIEIPKIDMAKQSLLAIATVLVIGATIVECRAASGLRLTCSGNLTNTREEGLTLGQCDLNFLPVKDINAIEDICGTPGTIDTPSETKCRMRAMVSPQTSRAADHRELYRVLDVLTVDKR*
Ga0126379_101638361	3300010366	Tropical Forest Soil	MAKQALLAIATMLLIGGTIVECRGASGLRLTCTGDLTNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTIDTPAETKCRIRATALPQTRRGADHRELYRVIDVLTVDKRVK*
Ga0126379_115147221	3300010366	Tropical Forest Soil	AKIDIAKIEIPKIDMAKQSLLAIATVLVIGATIVECRAASGLRLTCSGNLTNTREEGLTLGQCDLNFLPVKDINAIEDICGTPGTIDTPSETKCRMRAMVSPQTSRAADRRELYRVLDVLTVDKR*
Ga0126383_106372831	3300010398	Tropical Forest Soil	MAKQALLAVATMLVIGGTIVECRGASGLRLTCTGDLTNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTIDTPAETKCRIRATALPQTRRGADHRELYRVIDVLTVDKRVK*
Ga0124850_11356522	3300010863	Tropical Forest Soil	WRSNDMAKQRRGEATTWRSNDMAKQALLAIATMLVIGGTIVECRGASGLRLTCTGDLTNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTIDTPAETKCRIRATALPQTRRGADHRELYRVIDVLTVDKRVK*
Ga0124844_10581261	3300010868	Tropical Forest Soil	MPKTEIAKQTLVAMTTMLVVSGAIVEGRAASGLRLTCSGNLTNTREDGITLGQCDLNFLPVKDIDSIEDICGIPGTIIDTPAETKCRIKATVSPQTSRATDHRELYRVLDVITVDKR
Ga0124844_12745411	3300010868	Tropical Forest Soil	MPKTEIAKQTLVAMTTMLVVSGAIVEGRAASGLRLTCSGNLTNTREDGITLGQCDLNFLPVKDIDSIEDICGIPGTIDTPAETKCRIKATVSPQTSRATDHRELYRVLDVITVDK
Ga0153922_10615251	3300012181	Attine Ant Fungus Gardens	MAKQALIGIAAVLVIGGTIVECSAASGLRLTCLGNLTNTREDGITLGQCDLNFLSVKDVNSIEDVCGIPGTIDTPTETKCRIKATVSPQTSRAADHRELYRVLDVLTVDKR*
Ga0126369_100195186	3300012971	Tropical Forest Soil	MLVIGGTIVECRGASGLRLTCTGDLTNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTIDTPAETKCRIRATALPQTRRGADHRELYRVIDVLTVDKRVK*
Ga0182041_117132722	3300016294	Soil	SGLRLTCTGDLNNTREDGITLGQCDLNFLPVKDITSIEDICGIPSTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKPVK
Ga0182035_101542052	3300016341	Soil	MTWRSNDLAKQALLAVATMLIIGGTIVECRAASGLRLMCTGDLNNTREDGITLGQCDLNFLPVKDITSIEDICGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKPVK
Ga0182032_100870262	3300016357	Soil	MTWRSNDMAKQALLAVATMLIIGGTIVECRAASGLRLMCTGDLNNTREDGITLGQCDLNFLPVKDITSIEDICGIPGTTDTPAETKCRIRATVSPQTRHGADHRELYRVIDVLTVDKPVK
Ga0182040_101628692	3300016387	Soil	MLIIGGTIIKCCAASRLRLTCSGTLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPAETKCRIRATLSPQTSHAADRRELYRVLNLLTVDKR
Ga0182040_117548342	3300016387	Soil	VECRAASGLRLMCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKRVK
Ga0182039_121269832	3300016422	Soil	SGLRLTCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKRVK
Ga0182038_100191113	3300016445	Soil	MLIIGGTIIKCCAASRLRLTCSGTLTNTREYGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPAETKCRIRATLSPQTSHAADRRELYRVLDLLTVDKR
Ga0182038_107565222	3300016445	Soil	MAKQALLAVATMLIIGGTIVECRAASGLRLTCTGDLNNTREDGITLGQCDLNFLPVKDITSIEDICGIPGTTDTPAETKCRIKATVSPQTRRGADHRELYRVIDVLTVDKRVK
Ga0187802_100014786	3300017822	Freshwater Sediment	MAKIDMAKDMAKQALIGIVTVLVTGGTIVECSAASGLRLTCSGDLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPTETKCRIRATVSPQTSRAADHRELYRVLDVLTVDKR
Ga0187820_10000365	3300017924	Freshwater Sediment	MAKDMAKQALIGIVTVLVTGGTIVECSAASGLRLTCSGDLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPTETKCRIRATVSPQTSRAADHRELYRVLDVLTVDKR
Ga0187824_102782761	3300017927	Freshwater Sediment	IDMAKDMAKQALIGIVTVLVTGGTIVECSAASGLRLTCSGDLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPTETKCRIRATVSPQTSRAADHRELYRVLNVLTVDKR
Ga0187806_10636822	3300017928	Freshwater Sediment	MAKDMAKDMAKRALIAIVTVLVTGGTIVECSAASGLRLTCSGDLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPTETKCRIRATVSPQTSRAADHRELYRVLDVLTVDKR
Ga0187814_101108882	3300017932	Freshwater Sediment	KQALIGIVTVLVTGGTIVECSAASGLRLTCSGDLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPTETKCRIRATVSPQTSRAADHRELYRVLDVLTVDKR
Ga0187809_104171352	3300017937	Freshwater Sediment	MAKMDMAKDMAKQALIGIVTVLVTGGTIVECSAASGLRLTCSGDLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPTETKCRIRATVSPQTSRAADHRELYRVLDLLTVDKR
Ga0187779_100102095	3300017959	Tropical Peatland	MAKIDLAKIDMAKIDRTKQALLAIATALVIGGTIVECSAASGIRLTCSGTLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPATIDTPAETNCRIRATVSSQTSRAADHRELYRVLDVLTVDKR
Ga0187780_104783092	3300017973	Tropical Peatland	KQVLLAIATALVIGGTIVECSAASGIRLTCSGTLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPATVDTPAETKCRIRATVSSQTSRAADHRELYRVLDVLTVDKR
Ga0187774_104659131	3300018089	Tropical Peatland	MAQLDIAKIDIAKQTVAAIATMLVISGAIVECRAASGLRLTCSGSLTNTREDGITLGQCDLNFLPVKDIDSIEDICGIPGTIDTPTETKCRIRATVSPQTSRAADHRELYRVLDVMTVDK
Ga0210403_113120691	3300020580	Soil	MAKRAQIGIAAILVIGGTIVECGAASGLRLTCIGNLTNTREDGITLGQCDLNFLSVKDVNSIEDICGIPGTIDTPTETKCRIKATVSPQTNRAADHRELYRVLDVLTVDKR
Ga0210387_106794622	3300021405	Soil	MAKRAQIGIAAILVIGGTIAECSAASGLRLTCIGNLTNTREDGITLGQCDLNFLSVKDVNSIEDICGIPGTIDTPTETKCRIKATVSPQTNRAADHRELYRVLDVLTVDKR
Ga0210394_115790241	3300021420	Soil	MPKIDMPKIEMPKQTIVAIAAMLAISGAIVESRAASGLRLTCSGNLTNTREDGITLGPCDLNSLPVKDIGSIEDICGIPGTIDTPTETRCRIKATVSPQTSRAADHRELYRVLDVITVDK
Ga0207700_115266182	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LVISGAIVECRAASGLRLTCSGNLTNTREDGITLGQCDLNFLPVKDIDSIEDICGIPGTIDTPAENKCRIRATVSPQTSRAADHRELYRVLDVITVDKR
Ga0207730_10151261	3300026896	Tropical Forest Soil	AASRLRLTCSGTLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPAETKCRIRATVSPQTSHAADRRELYRVLDVLWISGEAIRKRSA
Ga0207858_10100062	3300026909	Tropical Forest Soil	MCAASRLRLTCSGTLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPAETKCRIRATLSPQTSHAADRRELYRVLDLLTVDKR
Ga0207744_10150892	3300026927	Tropical Forest Soil	VLIIGGTIIAASRLRLTCSGTLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPAETKCRIRATVSPQTSHAADRRELYRVLDVLWISGEAIRKRSA
Ga0207743_10104441	3300026945	Tropical Forest Soil	VLIIGGTIIKCCAASRLRLTCSGTLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPAETKCRIRATVSPQTSYA
Ga0207852_10142732	3300026959	Tropical Forest Soil	VLIIGGTIIAASRLRLTCSGTLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPAETKCRIRATVSPQTSHAADRRELYRVLDL
Ga0207824_10168951	3300026990	Tropical Forest Soil	IRLANFGFERPNSIDMAKIEMAKIEMAKIEIAKRALIAIATVLVIGGAIVECSAASGLQLTCSGTLTNTREDGITLGQGDLNFLPVKDINSIEDMYPRPIDTPAETKCRIRATVSSQTGRTSDRRELYRVLDVLTVDKR
Ga0207855_10228682	3300027039	Tropical Forest Soil	MCAASRLRLTCSGTLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPAETKCRIRATVSPQTSHAADRRELYRVLDVLWISGEAIRKRSA
Ga0207766_10092342	3300027042	Tropical Forest Soil	VLIPIAAVLIIGGTIIAASRLRLTCSGTLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPAETKCRIRATVSPQTSYAADRRELYRVLDVLTVDKR
Ga0207826_10009868	3300027680	Tropical Forest Soil	VLIIGGTIIAASRLRLTCSGTLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPAETKCRIRATVSPQTSYAADRRELYRVLDVLWISGEAIRKRSA
Ga0209074_101272853	3300027787	Agricultural Soil	SMSKIDMPKVDVPKVDIPKVDIPVDVAKQTVVAIATMLVISGAIVECRAASGLRLTCSGNLTNTREDGITLGQCDLNFLPVKDIDSIEDICGIPGTIDTPAENKCRIRATVSPQTSRAADHRELYRVLDVITVDKR
Ga0209040_102427622	3300027824	Bog Forest Soil	MAKIEMAKIDKAKQALIAIVTALVTGGTIVECSAASALRLTCSGNLTNTREDGITLGQCDLNLLPVKDINSIEDICGIPGTIDTPTETKCRIRATVSPQTSRAADHRELYRVLDVLTVDK
Ga0209039_100957812	3300027825	Bog Forest Soil	MAKIEMAKIDKAKQALIAIVTALVTGGTIVECSAASALRLTCSGNLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPTETKCRIRATVSPQTSRAADHRELYRVLDVSTVDK
Ga0209465_104116973	3300027874	Tropical Forest Soil	LRLTCSGNLTNTREDGLTLGQCDLNFLPVKDINAIEDICGIPGTIDSPTETKCRMRAMVSPQTNRAADHRELYRVIDVLTVDKR
Ga0209067_100137212	3300027898	Watersheds	MAKIEMAKIEMAKIEMAKIDKAKQALIAIVTALVTGGTIVECSAASGLRLTCSGNLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPIETKCRIRATVSPQTSRAADHRELYRVLDVLTVDKR
Ga0209583_101462052	3300027910	Watersheds	LVIGGTIAECSAASGLRLTCIGNLTNTREDGITLGQCDLNFLSVKDVNSIEDICGIPGTIDTPIETKCRIRATVSPQTSRAADHRELYRVLDVLTVDKR
Ga0209698_106122641	3300027911	Watersheds	LVIGGTIAECSAASGLRLTCIGNLTNTREDGITLGQCDLNFLSVKDVNSIEDICGIPGTIDTPTETKCRIKATVLPQTSRAADHRELYRVPDVLTVDKR
Ga0209069_100737512	3300027915	Watersheds	LVIGGTIAECSAASGLRLTCIRNLTNTREDGITLGQCDLNFLSVKDVNSIEDICGIPGTIDTPTETKCRIKATVSPQTSRAADHRELYRVLDVLTVDKR
Ga0170834_1014729153	3300031057	Forest Soil	AASGLRLTCIGNLTNTREDGITLGQCDLIFLSVKDVNSIEDICGIPGTIDTPTETKCRIKATVSPQTNRAADHRELYRVLDVLTVDKR
Ga0170824_1096590803	3300031231	Forest Soil	MAKQAQIGIAAILLIGTFVESSAASGLRLTCIGNLTNTREDGITLGQCDLNFLSVKDVNSIEDVCGIPGTIDTPSETKCRIKAAVSPQTSRAADHRELYRVLDVLTVDKR
Ga0170820_159816501	3300031446	Forest Soil	IGIAAILLIGTFVESSAASGLRLTCIGNLTNTREDGITLGQCDLNFLSVKDVNSIEDVCGIPGNIDTPSETKCRIKAAVSPQTSRAADHRELYRVLDVLTVDKRCNDPNSSWFGKM
Ga0170818_1097056801	3300031474	Forest Soil	IGIAAILLIGTFVESSAASGLRLTCIGNLTNTREDGITLGQCDLNFLSVKDVNSIEDVCGIPGTIDTPSETKCRIKAAVSPQTSRAADHRELYRVLDVLTVDKR
Ga0318534_105705921	3300031544	Soil	MLIIGGTIIKCCAASRLRLTCSGTLTNTREDGITLGQCDLNFLPVKDTNSIEDICGIPGTIDTPAETKCRIRATLSPQTSHAADRRELYRVLDLLTVDKR
Ga0318541_104744911	3300031545	Soil	MLIIGGTIIKCCAASRLRLTCSGTLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPAETKCRIRATLSPQTSHAADRRELY
Ga0318538_105465782	3300031546	Soil	MLIIGGTIVECRAASGLRLTCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELY
Ga0318538_107346372	3300031546	Soil	PWLRATKLDRIIDTAKQVLIPIAAMLIIGGTIIKCCAASRLRLTCSGTLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPAETKCRIRATLSPQTSHAADRRELYRVLDLLTVDKR
Ga0318528_100711221	3300031561	Soil	MCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKRVK
Ga0318515_101236251	3300031572	Soil	MTWRSNDMAKQALLAVATMLIIGGTIVECRAASGLRLMCTGDLNNTREDGITLGQCDLNFLPVKDITSIEDICGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKPVK
Ga0310915_108187732	3300031573	Soil	IIGGTIVECRAASGLRLTCTGDLNNTREDGITLGQCDLNFLPVKDITSIEDICGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKPVK
Ga0318542_103923511	3300031668	Soil	RAASGLRLTCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDMLTVDKRVK
Ga0318561_106185612	3300031679	Soil	VLIIGGTIIKCCAASRLRLTCSGTLTNTREDGITLGQCDLNFLPVKDTNSIEDICGIPGTIDTPAETKCRIRATVSPQTSYAADRRELYRVLDVLWISGEAIRKRSA
Ga0318572_103174681	3300031681	Soil	MAKQALLAVATMLIIGGTIVECRAASGLRLTCTGDLNNTREDGITLGQCDLNFLPVKDITFIEDICGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKPVK
Ga0318560_101911593	3300031682	Soil	MTWRSNDLAKQALLAVATMLIIGGTIVECRAASGLRLMCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKRVK
Ga0318560_103960592	3300031682	Soil	MLIIGGTIIKCCAASRLRLTCSGTLTNRREDGITLGQCDLNFLPVKDTNSIEDICGIPGTIDTPAETKCRIRATLSPQTSHAADRRELYRVLDLLTVDKR
Ga0307474_101342772	3300031718	Hardwood Forest Soil	MAKRAQIGIAAILVIGGTIAECSAASGLRLTCIGNLTNTGEDGITLGQCDLNFLSVKDVNSIEDICGIPGTIDTPTETKCRIKATVSPQTSRAADHRELYRVLDVLTVDKR
Ga0306917_103516823	3300031719	Soil	MAKQALLAVATMLIIGGTIVECRAASGLRLTCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKRVK
Ga0306918_102140591	3300031744	Soil	ECRAASGLRLTCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKRVK
Ga0318502_101410391	3300031747	Soil	MAKQALLAVATMLIIGGTIVECRAASGLRLTCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLT
Ga0307477_109618432	3300031753	Hardwood Forest Soil	MAKRAQIGIAAILVIGGTIAECSAASGLRLTCIGNLTNTREDGITLGQCDLNFLSVKDVNSIEDICGIPGTIDTPTETKCRIKATVSPQTSRAADHRELYR
Ga0307475_102208842	3300031754	Hardwood Forest Soil	MAKRAQIGIAAILVIGGTIAECSAASGLRLTCIGNLTNTGEDGITLGQCDLNFLSVKDVNSIEDICGIPGTIDTPTETKCRIKATVSPQASRAADHRELYRVLDVLTVDKR
Ga0318535_103251052	3300031764	Soil	MTWRSNDLAKQALLTVATMLIIGGTIVECRAASGLRLMCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKRVK
Ga0318509_105658921	3300031768	Soil	VLIIGGTIIKCCAASRLRLTCSGTLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPAETKCRIRATVSPQTSYAADRRELYRVLDVLWISGEAIRKRSA
Ga0318526_102235452	3300031769	Soil	MTWRSNDLAKQALLAVATMLIIGGTIVECRAASGLRLMCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVWGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKRVK
Ga0318521_110094251	3300031770	Soil	VECRAASGLRLTCTGDLNNTREDGITLGQCDLNFLPVKDITFIEDICGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKPVK
Ga0318547_103070601	3300031781	Soil	MTWRSNDLAKQALLAVATMLIIGGTIVECRAASGLRLMCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQARRGADH
Ga0318529_100292831	3300031792	Soil	TIIKCCAASRLRLTCSGTLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPAETKCRIRATLSPQTSHAADRRELYRVLDLLTVDKR
Ga0318529_104586332	3300031792	Soil	MAKQALLAVATMLIIGGTIVECRAASGLRLMCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKRVK
Ga0318503_100895773	3300031794	Soil	MTWRSNDLAKQALLAVATMLIIGGTIVECRAASGLRSMCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKRVK
Ga0318557_100463393	3300031795	Soil	MTWRSNDMAKQALLAVATMLIIGGTIVECRAASGLRLTCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKRVK
Ga0318576_100799401	3300031796	Soil	MAKQALLAVATMLIIGGTIVECRAASGLRLMCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKPVK
Ga0318523_100267104	3300031798	Soil	PIAAVLIIGGTIIKCCAASRLRLTCSRTLTNTREEGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPAETKCRIRATLSPQTSHAADRRELYRVLDLLTVDKR
Ga0318497_105538801	3300031805	Soil	TIIKCCAASRLRLTCSGTLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPAETKCRIRATVSPQTSYAADRRELYRVLDVLWISGEAIRKRSA
Ga0318568_109833411	3300031819	Soil	MTWRSNDMAKQALLAVATMLIIGGTIVECRAASGLRLMCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKWVK
Ga0318567_105818922	3300031821	Soil	AKQMLIPIAAVLIIGGTIIKCCAASRLRLTCSGTLTNTREDGITLGQCDLNFLPVKDTNSIEDICGIPGTIDTPAETKCRIRATLSPQTSHAADRRELYRVLDLLTVDKR
Ga0307478_100898941	3300031823	Hardwood Forest Soil	MAKRAQIGIAAILVIGGTIAQCSAASGLRLTCIGNLTNTREDGITLGQCDLNFLSVKDVNSIEDICGIPGTIDTPTETKCRIKATVSPQTSRSADHRELYRVLDVLTVDKR
Ga0310917_105778462	3300031833	Soil	MAKQALLAVATMLIIGGTIVECRATSGLRLTCTGDLNNTREDGITLGQCDLNFLPVKDITFIEDICGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKPVK
Ga0318517_101513942	3300031835	Soil	MTWRSNDMAKQALLAVATMLIIGGTIVECRAASGLRLTCTGDLNNTREDGITLGQCDLNFLPVKDITSIEDICGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKPVK
Ga0318512_104748281	3300031846	Soil	MLIIGGTIIKCCAASRLRLTCRGTLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPAETKCRIRATVSPQTSYAADRRELY
Ga0318495_104584322	3300031860	Soil	VLIIGGTIIKCCAASRLRLTCSGTLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPAETKCRIRATVSPQTS
Ga0306919_105066312	3300031879	Soil	MLIIGGTIIKCCAASRLRLTCSGTLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPAETKCRIRATVSPQTSYAADRRELYRVLDVLWISGEAIRKRSA
Ga0306925_107713871	3300031890	Soil	MRLLLTLASRSHARSTLQRHGEATTWRSNDMAKQALLAVATMLVIGGTIVECRGASGLRLTCTGDLTNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTIDTPAETKCRIRATASPQTRRGADHRELYRVIDVLTVDKRVK
Ga0306925_117730622	3300031890	Soil	CTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKRVK
Ga0318536_102725732	3300031893	Soil	MTWRSNDMAKQALLAVATMLIIGGTIVECRAASGLRLTCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLT
Ga0318551_104449192	3300031896	Soil	MTWRSNDLAKQALLAVATMLIIGGTIVECRAASGLRLMCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDMLTVDKR
Ga0318520_102062422	3300031897	Soil	MLIIGGTIIKCCAASRLRLTCSGTLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPAETKCRIRATLSPQTSHAADRRELYRVLDLLTVDKR
Ga0306923_116534931	3300031910	Soil	QALLAVATMLIIGGTIVECRAASGLRLTCTGDLNNTREDGITLGQCDLNFLPVKDITSIEDICGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKPVK
Ga0310912_100775471	3300031941	Soil	VLIPIAAVLIIGGTIIKCCAASRLRLTCSGTLTNRREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPAETKCRIRATLSPQTSHAADRRELYRVLDLLTVDKR
Ga0310916_108446482	3300031942	Soil	MLIIGGTIVECRAASGLRLTCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKRVK
Ga0310913_100396753	3300031945	Soil	MAKQALLAVATMLIIGGTIVECRAASGLRLMCTGDLNNTREDGITLGQCDLNFLPVKDITSIEDICGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKPVK
Ga0310913_103825902	3300031945	Soil	VLIIGGTIIKCCAASRLRLTCSGTLTNTREDGITLGQCDLNFLPVKDTNSIEDICGIPGTIDTPAETKCRIRATLSPQTSHAADRRELYRVLDLLTVDKR
Ga0310909_100919554	3300031947	Soil	MTWRSNDLAKQALLAVATMLIIGGTIVECRAASGLRLMCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDMLTVDKRVK
Ga0306926_101884702	3300031954	Soil	VLIIGGTIIKCCAASRLRLTCSGTLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPAETKCRIRATLSPQTSHAADRRELYRVLDLLTVDKR
Ga0306926_117220612	3300031954	Soil	MAKQALLAVATMLIIGGTIVECRAASGLRLMCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVI
Ga0318530_101905851	3300031959	Soil	MTWRSNDLAKQALLAVATMLIIGGTIVECRAASGLRLMCTGDLNNTREDGITLGQCDLNFLPVKDITSIEDICGIPGTTDTPAETKCRIKATVSPQTRRGADHRELYRVIDVLTVYKPVK
Ga0318530_104761711	3300031959	Soil	VATMLIIGGTIVECRATSGLRLTCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKRVK
Ga0307479_105766631	3300031962	Hardwood Forest Soil	MAKRAQIGIAAILVIGGTIAECSAASGLRLTCIGNLTNTGEDGITLGQCDLNFLSVKDVNSIEDICGIPGTIDTPTETKCRIKATVSPQTNRAADHRELYR
Ga0318531_103771351	3300031981	Soil	DTAKQVLIPIAAVLIIGGTIIKCCAASRLRLTCSGTLTNTREDGITLGQCDLNFLPVKDTNSIEDICGIPGTIDTPAETKCRIRATFSPQTSHAADRRELYRVLDLLTVDKR
Ga0318545_102219952	3300032042	Soil	NDLAKQALLAVATMLIIGGTIVECRAASGLRLMCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKRVK
Ga0318556_102650163	3300032043	Soil	IIKCCAASRLRLTCSGTLTNTREDGITLGQCDLNFLPVKDINSIEDICGIPGTIDTPAETKCRIRATVSPQTSYAADRRELYRVLDVLWISGEAIRKRSA
Ga0318556_105878201	3300032043	Soil	MTWRSNDLAKQALLAVATMLIIGGTIVECRAASGLRLMCTGDLNNTREDGITLGQCDLNFLPVKDITSIEDICGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVD
Ga0318558_101725432	3300032044	Soil	MLIIGGTIVECRAASGLRLMCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKRVK
Ga0318575_105617211	3300032055	Soil	MQLLPYLGFAQPRETDMATTWRSNDMAKQALLAVATMLIIGGTIVECRAASGLRLTCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDK
Ga0318533_112827762	3300032059	Soil	SNDMAKQRHGEATTWRSNDMAKQALLAVATMLIIGGTIVECRAASGLRLTCTGDLNNTREDGITLGQCDLNFLPVKDITSIEDICGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKPVK
Ga0318540_101202901	3300032094	Soil	TIVECRAASGLRLMCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDVLTVDKRVK
Ga0306920_1006841043	3300032261	Soil	MAKQALLAVATMLVIGGTIVECRGASGLRLTCTGDLTNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTIDTPAETKCRIRATASPQTRRGADHRELYRVIDVLTVDKRVK
Ga0318519_101914581	3300033290	Soil	MTWRSNDMAKQALLAVATMLIIGGTIVECRAASGLRLTCTGDLNNTREDGITLGQCDLNFLPVKDINSIEDVCGIPGTTDTPAETKCRIRATVSPQTRRGADHRELYRVIDMLTVDKRVK
Ga0318519_104226371	3300033290	Soil	MLIIGGTIIKCCAASRLRLTCSGTLTNTREDGITLGQCDLNFLPVKDTNSIEDICGIPGTIDTPAETKCRIGATFSTQTSHAADRRELYRVLDLLTVDKR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052531

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences