Metagenome / Metatranscriptome Family F052492

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F052492
Family Type	Metagenome / Metatranscriptome
Number of Sequences	142
Average Sequence Length	71 residues
Representative Sequence	VKYLWALLGLLYALLNIYVGYLLFTAGVGAKLAQKGLMLQAPPVLGGIALAVLALPLIWNSLRLATARTP
Number of Associated Samples	101
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.39 %
% of genes near scaffold ends (potentially truncated)	24.65 %
% of genes from short scaffolds (< 2000 bps)	84.51 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.80

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (98.592 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (26.761 % of family members)
Environment Ontology (ENVO)	Unclassified (30.986 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.183 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.24% β-sheet: 0.00% Coil/Unstructured: 37.76%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.80
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.80
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
f.63.1.1: Claudin	d3jbre_	3jbr	0.84851
a.25.1.1: Ferritin	d2fzfa1	2fzf	0.78964
f.24.1.1: Cytochrome c oxidase subunit I-like	d7coha_	7coh	0.76111
a.238.1.0: automated matches	d3ok8a_	3ok8	0.76065
a.25.1.1: Ferritin	d1z6oa1	1z6o	0.75943

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF00459	Inositol_P	4.93
PF07676	PD40	2.82
PF02585	PIG-L	1.41
PF09828	Chrome_Resist	1.41
PF01738	DLH	1.41
PF14031	D-ser_dehydrat	1.41
PF08241	Methyltransf_11	0.70
PF00033	Cytochrome_B	0.70
PF12838	Fer4_7	0.70
PF13247	Fer4_11	0.70
PF12697	Abhydrolase_6	0.70
PF10431	ClpB_D2-small	0.70
PF01292	Ni_hydr_CYTB	0.70
PF03450	CO_deh_flav_C	0.70
PF08808	RES	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	1.41
COG1290	Cytochrome b subunit of the bc complex	Energy production and conversion [C]	0.70
COG1969	Ni,Fe-hydrogenase I cytochrome b subunit	Energy production and conversion [C]	0.70
COG2864	Cytochrome b subunit of formate dehydrogenase	Energy production and conversion [C]	0.70
COG3038	Cytochrome b561	Energy production and conversion [C]	0.70
COG3658	Cytochrome b subunit of Ni2+-dependent hydrogenase	Energy production and conversion [C]	0.70
COG4117	Thiosulfate reductase cytochrome b subunit	Inorganic ion transport and metabolism [P]	0.70
COG5654	Predicted toxin component of a toxin-antitoxin system, contains RES domain	Defense mechanisms [V]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.59 %
Unclassified	root	N/A	1.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.59 %
Unclassified	root	N/A	1.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.59 %
Unclassified	root	N/A	1.41 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	86.62 %
Unclassified	root	N/A	1.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	84.51 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.41 %
Unclassified	root	N/A	1.41 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.70 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	83.80 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.41 %
Unclassified	root	N/A	1.41 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.70 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.70 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	83.80 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.41 %
Unclassified	root	N/A	1.41 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.70 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	83.80 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.41 %
Unclassified	root	N/A	1.41 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.70 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.70 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725002\|GPICC_F5MS3JC01ETUSI	Not Available	527	Open in IMG/M
3300004081\|Ga0063454_100731854	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300004633\|Ga0066395_10134745	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M
3300005174\|Ga0066680_10529948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	740	Open in IMG/M
3300005176\|Ga0066679_10904254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	556	Open in IMG/M
3300005178\|Ga0066688_10039980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2657	Open in IMG/M
3300005179\|Ga0066684_10774356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	636	Open in IMG/M
3300005180\|Ga0066685_10193502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1394	Open in IMG/M
3300005181\|Ga0066678_10289234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1070	Open in IMG/M
3300005184\|Ga0066671_10320188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	978	Open in IMG/M
3300005445\|Ga0070708_100182213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1963	Open in IMG/M
3300005447\|Ga0066689_10438278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	819	Open in IMG/M
3300005467\|Ga0070706_100423761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1238	Open in IMG/M
3300005467\|Ga0070706_101064746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	745	Open in IMG/M
3300005467\|Ga0070706_101136423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	719	Open in IMG/M
3300005468\|Ga0070707_100892140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	854	Open in IMG/M
3300005471\|Ga0070698_100191233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1984	Open in IMG/M
3300005518\|Ga0070699_100579234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1022	Open in IMG/M
3300005534\|Ga0070735_10341524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	899	Open in IMG/M
3300005536\|Ga0070697_100711756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	886	Open in IMG/M
3300005537\|Ga0070730_10005251	All Organisms → cellular organisms → Bacteria	11203	Open in IMG/M
3300005537\|Ga0070730_10186493	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300005537\|Ga0070730_10248797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1174	Open in IMG/M
3300005540\|Ga0066697_10744821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	534	Open in IMG/M
3300005542\|Ga0070732_10005002	All Organisms → cellular organisms → Bacteria	7186	Open in IMG/M
3300005542\|Ga0070732_10028552	All Organisms → cellular organisms → Bacteria	3169	Open in IMG/M
3300005552\|Ga0066701_10709922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	604	Open in IMG/M
3300005554\|Ga0066661_10168899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1345	Open in IMG/M
3300005557\|Ga0066704_10611108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	700	Open in IMG/M
3300005559\|Ga0066700_10438572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	918	Open in IMG/M
3300005561\|Ga0066699_10065687	All Organisms → cellular organisms → Bacteria	2289	Open in IMG/M
3300005568\|Ga0066703_10484487	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300005575\|Ga0066702_10206986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1189	Open in IMG/M
3300005586\|Ga0066691_10570230	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300005764\|Ga0066903_100050404	All Organisms → cellular organisms → Bacteria	5060	Open in IMG/M
3300005764\|Ga0066903_100090334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4066	Open in IMG/M
3300005764\|Ga0066903_105235883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	686	Open in IMG/M
3300006032\|Ga0066696_10505965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	792	Open in IMG/M
3300006032\|Ga0066696_10621489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	700	Open in IMG/M
3300006050\|Ga0075028_100454361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	741	Open in IMG/M
3300006796\|Ga0066665_11038517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	626	Open in IMG/M
3300006800\|Ga0066660_10788938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	774	Open in IMG/M
3300006903\|Ga0075426_10853407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	686	Open in IMG/M
3300006914\|Ga0075436_100998231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	628	Open in IMG/M
3300009012\|Ga0066710_103564940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	588	Open in IMG/M
3300009029\|Ga0066793_10863563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	513	Open in IMG/M
3300009038\|Ga0099829_10827496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	769	Open in IMG/M
3300009038\|Ga0099829_11173193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	636	Open in IMG/M
3300009089\|Ga0099828_10300871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1443	Open in IMG/M
3300009089\|Ga0099828_10505210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1090	Open in IMG/M
3300009090\|Ga0099827_11059976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	704	Open in IMG/M
3300009090\|Ga0099827_11474750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	592	Open in IMG/M
3300009137\|Ga0066709_101276219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1078	Open in IMG/M
3300009137\|Ga0066709_102561585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	685	Open in IMG/M
3300009137\|Ga0066709_102644365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	671	Open in IMG/M
3300010048\|Ga0126373_12116721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	624	Open in IMG/M
3300010358\|Ga0126370_11880577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	581	Open in IMG/M
3300010360\|Ga0126372_11995366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	627	Open in IMG/M
3300010376\|Ga0126381_103856044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	585	Open in IMG/M
3300010398\|Ga0126383_10205878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1893	Open in IMG/M
3300010870\|Ga0102750_10063524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	917	Open in IMG/M
3300010870\|Ga0102750_10933634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	543	Open in IMG/M
3300010874\|Ga0136264_10152945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	749	Open in IMG/M
3300010878\|Ga0136899_10178696	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300011269\|Ga0137392_11061909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	665	Open in IMG/M
3300011269\|Ga0137392_11104551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	650	Open in IMG/M
3300011270\|Ga0137391_10068157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3052	Open in IMG/M
3300011270\|Ga0137391_10506820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1021	Open in IMG/M
3300011270\|Ga0137391_10882797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	733	Open in IMG/M
3300011270\|Ga0137391_11412658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	542	Open in IMG/M
3300011271\|Ga0137393_10393670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1186	Open in IMG/M
3300011998\|Ga0120114_1118479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	506	Open in IMG/M
3300012014\|Ga0120159_1119284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	742	Open in IMG/M
3300012096\|Ga0137389_10320000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1315	Open in IMG/M
3300012189\|Ga0137388_10692423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	946	Open in IMG/M
3300012189\|Ga0137388_11184418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	702	Open in IMG/M
3300012202\|Ga0137363_11241392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	632	Open in IMG/M
3300012207\|Ga0137381_10548057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1008	Open in IMG/M
3300012207\|Ga0137381_10720281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	867	Open in IMG/M
3300012208\|Ga0137376_11427596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	583	Open in IMG/M
3300012209\|Ga0137379_10184296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2000	Open in IMG/M
3300012209\|Ga0137379_10712013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	909	Open in IMG/M
3300012210\|Ga0137378_10048860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3803	Open in IMG/M
3300012210\|Ga0137378_11103410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	708	Open in IMG/M
3300012210\|Ga0137378_11285333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	648	Open in IMG/M
3300012210\|Ga0137378_11649405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	549	Open in IMG/M
3300012210\|Ga0137378_11874092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	502	Open in IMG/M
3300012212\|Ga0150985_101361378	All Organisms → cellular organisms → Bacteria	4582	Open in IMG/M
3300012212\|Ga0150985_102161826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	539	Open in IMG/M
3300012212\|Ga0150985_106057289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2352	Open in IMG/M
3300012212\|Ga0150985_110083573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2490	Open in IMG/M
3300012212\|Ga0150985_115181240	All Organisms → cellular organisms → Bacteria	2256	Open in IMG/M
3300012212\|Ga0150985_118930075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1230	Open in IMG/M
3300012212\|Ga0150985_119198828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	613	Open in IMG/M
3300012212\|Ga0150985_119319095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	648	Open in IMG/M
3300012212\|Ga0150985_121884467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1117	Open in IMG/M
3300012353\|Ga0137367_10791001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	659	Open in IMG/M
3300012355\|Ga0137369_10730400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	679	Open in IMG/M
3300012357\|Ga0137384_10467635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1037	Open in IMG/M
3300012359\|Ga0137385_10694892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	850	Open in IMG/M
3300012359\|Ga0137385_10795871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	786	Open in IMG/M
3300012363\|Ga0137390_10243962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1782	Open in IMG/M
3300012363\|Ga0137390_11879791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	528	Open in IMG/M
3300012918\|Ga0137396_10043782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3038	Open in IMG/M
3300012971\|Ga0126369_11380177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	795	Open in IMG/M
3300012977\|Ga0134087_10490586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616	Open in IMG/M
3300013764\|Ga0120111_1047481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1086	Open in IMG/M
3300013772\|Ga0120158_10194731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1066	Open in IMG/M
3300014326\|Ga0157380_13209413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	522	Open in IMG/M
3300015245\|Ga0137409_10760487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	804	Open in IMG/M
3300018468\|Ga0066662_10048294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2692	Open in IMG/M
3300020070\|Ga0206356_10803780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1347	Open in IMG/M
3300020078\|Ga0206352_10572511	All Organisms → cellular organisms → Bacteria	8903	Open in IMG/M
3300021374\|Ga0213881_10052864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1722	Open in IMG/M
3300021388\|Ga0213875_10084526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1480	Open in IMG/M
3300021861\|Ga0213853_10192678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1717	Open in IMG/M
3300022467\|Ga0224712_10131738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1092	Open in IMG/M
3300022467\|Ga0224712_10217742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	873	Open in IMG/M
3300022533\|Ga0242662_10278261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	552	Open in IMG/M
3300025910\|Ga0207684_10311886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1356	Open in IMG/M
3300025910\|Ga0207684_10502113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1040	Open in IMG/M
3300025922\|Ga0207646_10441903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1174	Open in IMG/M
3300026326\|Ga0209801_1137758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1037	Open in IMG/M
3300026328\|Ga0209802_1206608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	748	Open in IMG/M
3300026548\|Ga0209161_10041649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3074	Open in IMG/M
3300026552\|Ga0209577_10509197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	795	Open in IMG/M
3300026555\|Ga0179593_1011103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2648	Open in IMG/M
3300027826\|Ga0209060_10258440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	797	Open in IMG/M
3300027842\|Ga0209580_10031709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2403	Open in IMG/M
3300027842\|Ga0209580_10085811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1510	Open in IMG/M
3300027857\|Ga0209166_10002663	All Organisms → cellular organisms → Bacteria	13280	Open in IMG/M
3300027857\|Ga0209166_10055960	All Organisms → cellular organisms → Bacteria	2285	Open in IMG/M
3300027874\|Ga0209465_10519070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	594	Open in IMG/M
3300027875\|Ga0209283_10988731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	502	Open in IMG/M
3300028554\|Ga0302047_10784483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	543	Open in IMG/M
3300028554\|Ga0302047_11084658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	917	Open in IMG/M
3300030784\|Ga0102758_10788609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	743	Open in IMG/M
3300031058\|Ga0308189_10411843	Not Available	561	Open in IMG/M
3300031058\|Ga0308189_10435618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	550	Open in IMG/M
3300031091\|Ga0308201_10023889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1315	Open in IMG/M
3300031093\|Ga0308197_10382967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	545	Open in IMG/M
3300034268\|Ga0372943_0186918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1278	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.85%
Host-Associated	Host-Associated	9.15%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.44%
Plants	Host-Associated → Plants	9.15%
Aquatic	Environmental → Aquatic	1.41%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.34%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.11%
Freshwater	Environmental → Aquatic → Freshwater	0.70%
Sediment	Environmental → Aquatic → Sediment	0.70%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.70%
Roots	Host-Associated → Plants → Roots	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.06%
Loam	Environmental → Terrestrial → Soil → Loam	11.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.11%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.70%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.70%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.07%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.52%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.11%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.70%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.70%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.70%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	26.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	18.31%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	7.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.34%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	6.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.23%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.41%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.70%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.70%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.70%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.70%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.70%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725002	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010870	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010874	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 3A (Eukaryote Community Metatranscriptome) (version 3)	Environmental	Open in IMG/M
3300010878	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 3A (Eukaryote Community Metatranscriptome) (version 7)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011998	Permafrost microbial communities from Nunavut, Canada - A30_35cm_6M	Environmental	Open in IMG/M
3300012014	Permafrost microbial communities from Nunavut, Canada - A10_80cm_6M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028554	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 3A (Eukaryote Community Metatranscriptome) (v9)	Environmental	Open in IMG/M
3300030784	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 6A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICC_04231440	2067725002	Soil	GARDWVGRGTGVVKYVWALAAILYALLNIYVGYIFVTAAFGTRLSTKGFPLQAAPILGGIGLAVLALPLIWNAIRLATSKTPSY
Ga0063454_1007318542	3300004081	Soil	VKYLWVVLGVLYGLLSIYVGYLFIQSGIGAKLAQKGFLLQGPPLLGGILLILLSLPLLWNCVRLATAGTPRY*
Ga0066395_101347452	3300004633	Tropical Forest Soil	VKYLWALLGLLYALLSIYVGYLFVTAGTGARLSQKGLLLQVPPILGGIALVILALPLIWNCARLVSARGPRY*
Ga0066680_105299482	3300005174	Soil	MKYVWALVGVAYALLCIYVGYLFVTAGTGARLSQKGLLLQAPPILGGIALVILALPLIWNCARLVSARGPRY*
Ga0066679_109042541	3300005176	Soil	VKYLWALIGLLYALLNIYTGYVLFTAGTGARLAQKGILLQAPPVLGGIALAILAIPLIWNSIRLA
Ga0066688_100399804	3300005178	Soil	VKYLWAVLGLLYALLSIYVGYLFFTAGTGARLSQKGLLLQAPPVLGGIALVLLALPLIWNCVRLATSRSSTA*
Ga0066684_107743562	3300005179	Soil	VKYVWALLGLVYALLSIYVGYLFVTAGTGARLAQKGLILQAPPILGGIALVILALPLIWNCVRLVSARGPRY*
Ga0066685_101935022	3300005180	Soil	VKYLWALIGLLYALLNIYAGYVLFTAGTGARLAQKGIMLQAPPVLGGIALAILALPLIWNSVRLATART*
Ga0066678_102892341	3300005181	Soil	VKYLWALLGLLYALLSIYVGYLFFTAGTGARLSQKGLLLQAPPVLGGIALVLLALPLIWNCVRLATSRSSTA*
Ga0066671_103201881	3300005184	Soil	VKYVWVIVGLLYAVLNVYTGYLLFTAGVGPKLAQKGIMLQAPPVLGGIALAVLAIPLIWNSLSLVRSQKSEVRSQTSDASG*
Ga0070708_1001822133	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKYLWALIGLLYALLNIYTGYVLFTAGTGVKLSQKGIMLQAPPVLGGIALAVLALPLIWNCVRLATARTP*
Ga0066689_104382782	3300005447	Soil	VKYVWALIGLLYALLNIYTGYVLFTAGTGARLAQKGVMLQAPPVLGGIALAILALPLVWNSVRLAIGSQKSELRTQK
Ga0070706_1004237612	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VKYLWALLGLLYALLNLYVAYLLFTAGTGARLAQKGIMLQAPPVLGGLALAVLALPLIWNSIRLTTARTP*
Ga0070706_1010647462	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VKYLWALVGLLYALLNIYVGYLFVTAAMGHGLTQKGLLLQAPPFLGGIGLAVLALPLLWNVLRLVTARAPSY*
Ga0070706_1011364232	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LLYALLNIYVGYLLFTAGVGAKLAQKGLMLQAPPVLGGIALAVLALPLIWNSLRLATARTP*
Ga0070707_1008921402	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VKYVWALLGLLYALLNIYVGYLLFTAGVGAKLAQKGLMLQAPPILGGIALAVLALPLIWNSLRLATARTP*
Ga0070698_1001912333	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VKYLWALLGLLYALLNIYVGYVLITAGVGAKLAQKGVMLQAPPVLGGIALAVLALPLIWNSLRLATARTP*
Ga0070699_1005792342	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VKYLWALLGLLYALLNIYVGYLLFTAGLGAKLAQKGVMLQAPPVLGGIALAVLALPLIWNSLRLATARTP*
Ga0070735_103415241	3300005534	Surface Soil	VRYLWAVIGVLYALLSIYVGYLFFTSGIGAKLLQKGIYLQAPPILGGIALVILAIPLIWNSIRLATSRIPR
Ga0070697_1007117561	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VKYLWALLGLLYALLNIYVGYLLFTAGVGAKLAQKGLMLQAPPVLGGIALAVLALPLIWNSLRLATARTP*
Ga0070730_100052519	3300005537	Surface Soil	MKYLWAVLGLLYAALNLYVGYLLVMAGTGPKLAQKGIVLTAPPILGGIALAILALPLLWNCVRLATARPAADSV*
Ga0070730_101864934	3300005537	Surface Soil	MKYLWALLGLLYALLNVYVGYVLFHAGTGPTLAQKGVMLQAPPVLGGIALAVLALPLIWNSFRLATARTP*
Ga0070730_102487973	3300005537	Surface Soil	MRFVWAVLGALYAVLAIYVGYLFITAATGEHLTQKGLLLQAAPLLGGIGLILFAIPLLWNCLSLAIRRPSAPPG*
Ga0066697_107448211	3300005540	Soil	YALLNIYTGYVLFTAGTGARLAQKGIMLQAPPVLGGIALAILALPLIWNSVRLATAKT*
Ga0070732_100050026	3300005542	Surface Soil	MRFVWALLAALYALLAIYVGYLFITAATGEHLTQKGLLLQAAPFLGGLGLILFAIPLLWNCVALVVRRPSAPPG*
Ga0070732_100285522	3300005542	Surface Soil	VKYVWALLGLLYAILSIYVGYLFITSATGDRLSQKGLLLQAPPLLGGLALIVLALPLLWNCLRLVTARVARG*
Ga0066701_107099222	3300005552	Soil	LCIYVGYLFVTAGTGARLSQKGLLLQAPPILGGIALVILALPLIWNCARLVSARGPRY*
Ga0066661_101688992	3300005554	Soil	VKYLWAVLGLLYALLSISVGYLFFTAGTGARLSQKGLLLQAPPVLGGIALVLLALPLIWNCVRLATSRSSTA*
Ga0066704_106111081	3300005557	Soil	ARGWLRRGRHRVKYVWALLGLLYALLSIYVAYLFVTAGTGAKLAQKGLILQAPPILGGIALVVLALPLIWNCLRLVSARGPRY*
Ga0066700_104385722	3300005559	Soil	LYALLSIYVGYLFFTAGTGARLSQKGLLLQAPPVLGGIALVLLALPLIWNCVRLATSRSSTA*
Ga0066699_100656874	3300005561	Soil	VKYVWALLGLLYALLSIYVGYLFVTAGTGAKLAQKGLILQAPPILGGIALVILALPLIWNCLRLVSARRPRY*
Ga0066703_104844872	3300005568	Soil	VKYVWALLGLLYALLSIYVGYLFVAAGTGAKLAQKGLILQAPPILGGIALVILALPLIWNCVRLVSARGPRY*
Ga0066702_102069862	3300005575	Soil	VKYVWALLGLVYALLSIYVGYLFVTAGTGARLAQKGLILQAPPILGGIALVVLALPLIWNCVRLVSARGPRY*
Ga0066691_105702302	3300005586	Soil	VKYLWALLGLLYALLSIYVGYLFFTAGTGARLSQKGLLLQAPPVLGGIALVLLALPLIWNCVRLVTSSPSPSGRGPG*
Ga0066903_1000504044	3300005764	Tropical Forest Soil	VRFVWAILGLLYALLSIYVGYLFVVSGTGEKLQQKGAALQAAPLLGGIALIILSIPLIWNCIRLATSRI*
Ga0066903_1000903344	3300005764	Tropical Forest Soil	VKYVWALLGLLYALLSIYVGYLFVVQATGVRLSEKGLLLQAPPFLGGIALILLSLPLVWNAVRLATSKTPSY*
Ga0066903_1052358832	3300005764	Tropical Forest Soil	VKYLWALVGVLYALLNIYVGYILITAGSGAKLAQKGILLQAPPILGGLGLAVLALPLIWNCVRLATSKTG*
Ga0066696_105059651	3300006032	Soil	VKYVWVIVGLLYALLNVYTGYLLFTAGVGPKLAQKGIMLQAPPVLGGIALAALAIPLIWNSLSLVRSQKSVRSQSEVRSQTSDATG*
Ga0066696_106214891	3300006032	Soil	VKYVWALLGLLYALLSIYVGYLFVTAGTGARLAQKGLILQAPPILGGIALVILALPLIWNCLRLVSA
Ga0075028_1004543612	3300006050	Watersheds	VKYLWALIGLAYALLNIYVGYLLFTAGTGVKLSQKGVMLQAPPVLGGIALVVLALPLIWNSVRLATARTSNY*
Ga0066665_110385172	3300006796	Soil	VKYLWALIGLLYALLNIYTGYVLFTAGTGARLAQKGIMLQAPPVLGGIALAILALPLVWNSVRLAIGSQKSELRSCEPEAVDPWQP*
Ga0066660_107889382	3300006800	Soil	VKYVWVIVGLLYALLNVYTGYLLFTAGVGPKLAQKGIMLQAPPVLGGIALAVLAIPLIWNSLSLGGSQKSIRSQKSEVRRQTSDASG*
Ga0075426_108534071	3300006903	Populus Rhizosphere	VKYLWALLAVLYAVLSIYVGYLFVTSATGRLTQKGLLLQAPPLLGGIALILLALPLLWNCLRLVTARRV*
Ga0075436_1009982312	3300006914	Populus Rhizosphere	VKYLWALLGLLYALLSIYVGYLFFTAGTGVRLSQKGVLLQGPPILGGIALVLFALPLIWNCVRLATSRVER*
Ga0066710_1035649402	3300009012	Grasslands Soil	MRYLWTLIGLLYALLNIYVGYLFVTAAMGHGLSQKGLLLQAPPFLGGIGLAVLALPLLWNVFRLVTSRPPSY
Ga0066793_108635631	3300009029	Prmafrost Soil	VKYLWALIGLLYAALNLYVGYLLVTAGSGPKLAQKGLLIQAPPVLGGLALAVLALPLLWNCVRLATAKTDS*
Ga0099829_108274961	3300009038	Vadose Zone Soil	YALLNIYVGYLFVTAATGHGLSQKGLLLQAPPFLGGIGLAVLALPLLWNVLRLVTARTPSY*
Ga0099829_111731931	3300009038	Vadose Zone Soil	VKYLWALLGLLYALLSIYVGYLFFTLATGRLGPKGLLLQAPPVLGGIALVVLAIPLIWNCVR
Ga0099828_103008712	3300009089	Vadose Zone Soil	VKYVWALIGLLYALLNIYVGYVLFAAGTGAKLAQKGVMLQAPPVLGGIALAVLALPLIWNSVRLATAPTPRY*
Ga0099828_105052102	3300009089	Vadose Zone Soil	VKYLWALLGLLYALLNIYVAYLLFTAGTSARLAQKGIVLQAPPVLGGLALAVLALPLIWNSVRLATARQGVGTTTRP*
Ga0099827_110599762	3300009090	Vadose Zone Soil	VKYLWALIGLLYALLNIYTGYVLFTAGTGAKLAQKGLMLQAPPVLGGIALAVLALPLIWNSVRLATAKTP*
Ga0099827_114747502	3300009090	Vadose Zone Soil	GLLYALLNIYVGYLFVTAAMGHGLSQKGLLLQAPPFLGGIGLAVLALPLIWNVVRLVTSRAPSY*
Ga0066709_1012762192	3300009137	Grasslands Soil	VKYLWALIGLLYALLNIYTGYVLFTAGTGARLAQKGIMLQAPPVLGGIALAILALPLVWNSVRLAIGSQ
Ga0066709_1025615851	3300009137	Grasslands Soil	MRYLWTLIGLLYALLNIYVGYLFVTAAMGHGLSQKGLLLQAPPFLGGIGLAVLALPLLWNVFRLVTSRPPSY*
Ga0066709_1026443651	3300009137	Grasslands Soil	VKYLWALIGLLYALLNIYTGYVLFTAGTGARLAQKGIMLQAPPVLGGIALAVLALPLIWNSVRLATARTPAA*
Ga0126373_121167211	3300010048	Tropical Forest Soil	MRFVWALLGLLYALVAIYVGYQFFTAGTERLGPKGILLQAPPILGGIALVVLAIPLIWNCVRLVTARVPRY*
Ga0126370_118805771	3300010358	Tropical Forest Soil	VKYVWALLGLLYALLSIYVGYLFIVQATGVRLSEKGLLLQAPPFLGGIALILLSLPLVWNAVRLATSKTPSY*
Ga0126372_119953661	3300010360	Tropical Forest Soil	VKYLWALLGLLYALLSIYVGYLFVTAGTGARLSQKGLLLQVPPILGGIALVILALPLIWNCARLVSARGPRS*
Ga0126381_1038560442	3300010376	Tropical Forest Soil	VKYVWVIIGVLYALLSIYVGYLFITSATGAKLQQKGLLLQVPPLVGGIALILLSLPLLWNAVRLATSRPPTY*
Ga0126383_102058784	3300010398	Tropical Forest Soil	VKYVWALLGLLYALLSIYVGYLFIVQATGVRLSEKGLLLQAPPFLGGIALILLSLPLLWNAVRLATSKTPSY*
Ga0102750_100635242	3300010870	Soil	MKYLWALIGLLFALLNIYVGYLFVTAGFGARLSTKGIMLQAPPVLGGIALAVLALPLIWNCVRLVTARTPRY*
Ga0102750_109336341	3300010870	Soil	VKYLWLLLALLYGVLNVYTGYVLVMAGTGPRLAQKGIMLQAPPVLGGIALAVLALPLIWNCLRLATAKTPKY*
Ga0136264_101529452	3300010874	Soil	MKYLWALIGLLFALLNIYVGYLFVTAGFGARLSTKGIMLQAPPVLGGIALAVLALPLIWNCVRLV
Ga0136899_101786962	3300010878	Soil	VKYLWLLIGLAYAALNIYVGYVLVVAGTGPKLAQKGILLQAPPILGGIALAILALPLIWNSLRFLTAKTPPTA*
Ga0137392_110619091	3300011269	Vadose Zone Soil	VKYVWALIGLLYALLNIYVGYVLFAAGTGAKLAQKGVMLQAPPVLGGIALAVLALPLIWNSVRLATAKKIST*
Ga0137392_111045512	3300011269	Vadose Zone Soil	MKYLWALIGLLYALLNIYVGYLFVTAAMGHGLSQKGLLLQAPPFLGGIGLAVLALPLIWNSMQLAAARPPRY
Ga0137391_100681574	3300011270	Vadose Zone Soil	VKYLWAVLGLLYALLNIYVGYVLFTAGVGAKLAQKGIMLQAPPVLGGIALAVLALPLIWNSIRLATARTA*
Ga0137391_105068202	3300011270	Vadose Zone Soil	MKYLWALIGLLYALLNIYVGYLFVTAAMGHGLSQKGLLLQAPPFLGGIGLAVLALPLLWNVFRLITSRPPSY*
Ga0137391_108827972	3300011270	Vadose Zone Soil	VKYLWAVLGLLYALLSIYVGYVFFTAGTGARLSQKGLLLQAPPVLGGIALVLFALPLIWNCVRLITSPSPSGRGLG*
Ga0137391_114126581	3300011270	Vadose Zone Soil	VKYLWALLGLLYALLNIYVAYLMFTAGTGARLAQKGIMLQAPPVLGGLALAVLALPLIWNSVRLATAPQGVGTTTRP*
Ga0137393_103936701	3300011271	Vadose Zone Soil	VKYLWAVLGLLYALLNIYVGYVLFTAGVGAKLAQKGIMLQAPPVLGGIALAVLALPLIWN
Ga0120114_11184792	3300011998	Permafrost	VKYVWVVLGLVYAVLNLYVGYLLVTAGTGPKLSQKGILLQAPPVLGGIALAVLALPLLWTCVRLATAKTEG
Ga0120159_11192841	3300012014	Permafrost	VKKYLWAVLGLLHAVLNLYVGYLLVAAGIGPKLSQKGILLQAPPVLGGIALAVLALPLVWTCVRLATAKSVSS*
Ga0137389_103200001	3300012096	Vadose Zone Soil	RWRRLVKYLWALIGLLYALLNIYTGFVLFTAGTGVKLAQIGVMLQAPPVLGGIALAVLALPLIWNSVRLATAKT*
Ga0137388_106924232	3300012189	Vadose Zone Soil	MKYVWALIGLLYALLNIYVGYVLFAAGTGAKLAQKGIMLQAPPVLGGIALAVLALPLIWNSVRLATARTR*
Ga0137388_111844182	3300012189	Vadose Zone Soil	MKYLWALIGLLYALLNIYVGYVLFTAGTGAKLAQKGIMLQAPPVLGGIALAVLALPLIWNSVRLATARTS*
Ga0137363_112413921	3300012202	Vadose Zone Soil	MKYLWALIGLLYALLNIYVGYLFVTAAMGHGLSQKGLLLQAPPFLGGIGLAVLVLPLIWNSARLVFTRPRVA*
Ga0137381_105480572	3300012207	Vadose Zone Soil	VKYAWALVGLLYALLNIYVGFEFVTAATGPRLSQKGVLLQVPPFLGGIALAILALPLIWNCVRHGLARPQTF*
Ga0137381_107202812	3300012207	Vadose Zone Soil	VKYLWALIGLLYALLNIYTGYVLFTAGTSARLAQKGVMLQAPPVLGGIALAILALPLVWNSVRLAIGSQKSEVRTQKLSAKG*
Ga0137376_114275961	3300012208	Vadose Zone Soil	WRRFVKYLWALIGLLYALLNIYTGYVLFTAGTGARLAQKGIMLQAPPVLGGIALAVLALPLIWNSVRLLTAKKVAT*
Ga0137379_101842961	3300012209	Vadose Zone Soil	VKYLWAILGLLYALLSIYVGYLFISSAIGPKLAQKGLLLQAPPFLGGIALAVLAIPLIWNCVRLFTSRPQA*
Ga0137379_107120132	3300012209	Vadose Zone Soil	MRYLWTLIGLLYALLNIYVGYLFVTAAMGHGLSQKGLLLQAPPFLGGIGLAVLALPLIWNSARLVFTPPRVA*
Ga0137378_100488604	3300012210	Vadose Zone Soil	VKYLWAILGLLYALLSIYVGYLFISSAIGPKLAQKGLLLQAPPFLGGIALAVLAIPLIWNCVRLVTSRPQA*
Ga0137378_111034102	3300012210	Vadose Zone Soil	VKYLWALLGLLYALLNIYTGYVLFTAGTGAKLAQKGLMLQAPPVLGGIALAVLALPLIWNSIRLATARTA*
Ga0137378_112853332	3300012210	Vadose Zone Soil	LYALLNIYVGYLFVTAAMGHGLSQKGLLLQAPPFLGGIGLAVLALPLIWNVVRLVTSRAPSY*
Ga0137378_116494051	3300012210	Vadose Zone Soil	VKYVWALVALLYALLNIYVGYLLFTAGTGVKLAQKGLLLQAPPVLGGIALAILALPVMWNCVRLATAKRSNY*
Ga0137378_118740922	3300012210	Vadose Zone Soil	LGGWRCRVKYLWALLGLLYALLNFYVGYLFFTAGTGRLGPKGILLQAPPVLGGIALAVLAIPLIWNCIRLATARTTNY*
Ga0150985_1013613785	3300012212	Avena Fatua Rhizosphere	MKYLWVLIAILYALLNIYVGYLFFVAGTGPRLSQKGILLQAPPILGGIALAVLALPLLWNAFRLATSRTPQ*
Ga0150985_1021618262	3300012212	Avena Fatua Rhizosphere	VKYLWALIGLLYALLSIYVGYLFIQSGMGARLAQKGALLQGPPLLGGIALIILSLPLLWN
Ga0150985_1060572893	3300012212	Avena Fatua Rhizosphere	MKYLWVLIALAYAVLNIYVGYILFVAGTGAKLQQKGIMLQAPPILGGLALAVLAIPLIWNAFRLATSRTP*
Ga0150985_1100835731	3300012212	Avena Fatua Rhizosphere	MKFVWVLIGILYAVLNIYVGYLLFVAGTGAKLMQKGPYLQGPPILGGLALIILALPLIWNCIRLATSRTG*
Ga0150985_1151812402	3300012212	Avena Fatua Rhizosphere	VKFLWVLIGVLYALLNIYVGYLFITAGTGARLSQKGVLLQGPPVLGGLALIVLALPLIWNCIRLATSRTG*
Ga0150985_1189300752	3300012212	Avena Fatua Rhizosphere	MKYLWALIAIAYALLNIYVGYILFVAGTGARLSQKGIYLQAPPILGGLALAVLAIPLIWNAFRLATSRRTP*
Ga0150985_1191988281	3300012212	Avena Fatua Rhizosphere	MKYLWVLIAILYALLNIYVGYLFFVTGVGAKLAQKGPYLQGPPVLGGIALALLALPLIWNAVRLATSRTPSS*
Ga0150985_1193190952	3300012212	Avena Fatua Rhizosphere	VRYLWALVAIAYALLNIYVGYIFVTAGFGERLSTKGLPLQLPPVLGGIALALLALPLIWNAFRLATARQVKY*
Ga0150985_1218844672	3300012212	Avena Fatua Rhizosphere	VKYVWAVVGIAYALLNLYVGYVLFVAGTGARLAQKEIYLQAPPILGGLALAILALPLIWNAVRLATSRVSS*
Ga0137367_107910011	3300012353	Vadose Zone Soil	AVLNIYVGYLFFTAGTGARLSQKGVLLQAPPVLGGIALAVLALPLIWNAIRLATSRTPKY
Ga0137369_107304001	3300012355	Vadose Zone Soil	VKYVWVLIGLAYAVLNIYVGYLFFTAGTGARLSQKGVLLQAPPVLGGIALAVLALPLIWNAIRLATSRTPK
Ga0137384_104676352	3300012357	Vadose Zone Soil	VKYLWALIGLLYALLNIYTGYVLFTAGTGARLAQKGIMLQAPPVLGGIALAILALPLVWNSVRLAIGSQKSEVRTQKLSAKG*
Ga0137385_106948922	3300012359	Vadose Zone Soil	MKFVWALIGLLYALLNIYVGYLFVTAAMGLGLSQKGLLLQAPPFLGGIGLAVLALPLIWNVVRLVTFRAPSY*
Ga0137385_107958712	3300012359	Vadose Zone Soil	VKYAWALVGLLYALLNIYVGFEFVTASTGPRLSQKGVLLQVPPFLGGIALAILALPLIWNCVRHGLARPQTF*
Ga0137390_102439622	3300012363	Vadose Zone Soil	MKYLWALLGLLYALLSIYVGYLFIAAATGAKLSQKGVLLQAPPLLGGIALAVLALPLIWNCIRLATARTP*
Ga0137390_118797912	3300012363	Vadose Zone Soil	MKFVWALIGLLYALLNIYVGYLFVTAAMGHGLSQKGLLLQAPPFLGGIGLAVLALQLMWNVVRLVTSRAPSY*
Ga0137396_100437823	3300012918	Vadose Zone Soil	VKYLWALIGLLYALLNIYVGYVLFIAGTGAKLAQKGIMLQAPPVLGGIALAVLALPLIWNSVRLVTVKTAHS*
Ga0126369_113801772	3300012971	Tropical Forest Soil	VKYLWAVIGLLYALLNIYVGYTLITAGAGAKLAQKGILLQAPPILGGLGLAVLALPLIWNCVRLATSKTG*
Ga0134087_104905862	3300012977	Grasslands Soil	VKYLWALIGLVYALLNIYTGYLLFTAGTGAKLAQKGLLLQAPPVLGGIALAIFAVPLIW
Ga0120111_10474813	3300013764	Permafrost	VKYLWAVLGLLYAVLNLYVGYLLVTAGIGPKLSQKGILLQAPPVLGGIALAVLALPLVWTCVRLATAKSVSS*
Ga0120158_101947312	3300013772	Permafrost	VKKYLWAVLGLLYAVLNLYVGYLLVAAGIGPKLSQKGILLQAPPVLGGIALAVLALPLVWTCVRLATAKSVSS*
Ga0157380_132094132	3300014326	Switchgrass Rhizosphere	FLWALIGLLYALLNIYVGYLFVVAAMGPKLTQKGIALQSAPFLGGLGLAVLAIPLIWNCLRLATSKTASPS*
Ga0137409_107604871	3300015245	Vadose Zone Soil	MKYLWAVLGLLYAVLNLYVGYLLVTAGTGARLAQKGMLLQAPPVLGGIALAILALPLLWNCVRLATAKTDA*
Ga0066662_100482941	3300018468	Grasslands Soil	VKYVWALLGLLYALLSIYVGYLFVAAGTGAKLAQKGLILQAPPILGGIALVVLALPLIWNCLRLVSARGPRY
Ga0206356_108037802	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	VKYLWVVLGLLYAALNIYVGYVLVTAGMSARLAQKGLLLQAPPVLGGIALVVLALPLLWNCIRLATARTPDTRHRAA
Ga0206352_105725113	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	VKYLWVLPGLLYVALNVYVGYLFVQSGMGAKLAPKGILLQAPPVLGGIALIVLSVPLLWNCLRLATSRVRY
Ga0213881_100528642	3300021374	Exposed Rock	MKYLWALLGLLYAVLSIYVGYLFITSAVGAKLTQKGLLLQVPPLLGGIALILLAVPLLWNCARLVTARTA
Ga0213875_100845263	3300021388	Plant Roots	MKYLWALLGLLYAVLSIYVGYLFITSAVGAKLTQKGLLLQVPPLLGGIALILLALPLI
Ga0213853_101926783	3300021861	Watersheds	VKYLWALLGLLYAVLNLYVGYLLVTAGTGAKLAQKGAFLQAPPVLGGIALVVLALPLIWNCARLATAKSEA
Ga0224712_101317383	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	LLGLLYVALNVYVGYLFVQSGMGAKLAPKGILLQAPPVLGGIALIVLSVPLLWNCLRLATSRVRY
Ga0224712_102177422	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	VKYLWVLLGLLYALLNLYVGYLLFTAGTGAKLAQKGIMLQAPPVLGGIALAVLAIPLIWNCIRLATARTPRY
Ga0242662_102782611	3300022533	Soil	MKYLWVLLGLLYALLSIYVGYLFIISGTGPKLALKGLLLQAPPVLGGLALIVLAVPLIWNSVRLATARTPS
Ga0207684_103118862	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VKYLWALLGLLYALLNIYVGYLLFTAGVGAKLAQKGLMLQAPPVLGGIALAVLALPLIWNSLRLATARTP
Ga0207684_105021132	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VKYLWALVGLLYALLNIYVGYLFVTAAMGHGLTQKGLLLQAPPFLGGIGLAVLALPLLWNVLRLVTARAPSY
Ga0207646_104419032	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VKYLWALLGLLYALLNIYVGYLLFTAGVGAKLAQKGLMLQAPPILGGIALAVLALPLIWNSLRLATARTP
Ga0209801_11377582	3300026326	Soil	VKYLWAVLGLLYALLSIYVGYLFFTAGTGARLSQKGLLLQAPPVLGGIALVLLALPLIWNCVRLATSRSSTA
Ga0209802_12066082	3300026328	Soil	MKYVWALVGVAYALLCIYVGYLFVTAGTGARLSQKGLLLQAPPILGGIALVILALPLIWNCARLVSARGPRY
Ga0209161_100416494	3300026548	Soil	VKYLWALLGLLYALLSIYVGYLFFTAGTGARLSQKGLLLQAPPVLGGIALVLLALPLIWNCVRLATSRSSTA
Ga0209577_105091972	3300026552	Soil	VKYVWALLGLLYALLSIYVGYLFVTAGTGAKLAQKGLILQAPPILGGIALVMLALPLIWNCVRLVSARGPRY
Ga0179593_10111034	3300026555	Vadose Zone Soil	MKFLWALLGLLYALLNIYVGYIFVTAAMGHGLSQKGLLLQAPPFLGGIALAVLALPLIWNCARLVVVPPRVS
Ga0209060_102584402	3300027826	Surface Soil	VRYLWAVLGLLYALLAIYVGYLFFTSGVGAKLMQKGIYLQAPPILGGIALVILAIPLIWNCIRLATARIPRY
Ga0209580_100317092	3300027842	Surface Soil	MRFVWALLAALYALLAIYVGYLFITAATGEHLTQKGLLLQAAPFLGGLGLILFAIPLLWNCVALVVRRPSAPPG
Ga0209580_100858112	3300027842	Surface Soil	VKYVWALLGLLYAILSIYVGYLFITSATGDRLSQKGLLLQAPPLLGGLALIVLALPLLWNCLRLVTARVARG
Ga0209166_1000266317	3300027857	Surface Soil	MKYLWAVLGLLYAALNLYVGYLLVMAGTGPKLAQKGIVLTAPPILGGIALAILALPLLWNCVRLATARPAADSV
Ga0209166_100559605	3300027857	Surface Soil	MKYLWALLGLLYALLNVYVGYVLFHAGTGPTLAQKGVMLQAPPVLGGIALAVLALPLIWNSFRLATARTP
Ga0209465_105190702	3300027874	Tropical Forest Soil	VKYLWALLGLLYALLSIYVGYLFVTAGTGARLSQKGLLLQVPPILGGIALVILALPLIWNCARLVSARGPRY
Ga0209283_109887311	3300027875	Vadose Zone Soil	VKYLWALLGLLYALLNIYVAYLLFTAGTSARLAQKGIVLQAPPVLGGLALAVLALPLIWNSVRLATARQGVGTTTRP
Ga0302047_107844831	3300028554	Soil	VKYLWLLLALLYGVLNVYTGYVLVMAGTGPRLAQKGIMLQAPPVLGGIALAVLALPLIWNCLRLATAKTPKY
Ga0302047_110846582	3300028554	Soil	MKYLWALIGLLFALLNIYVGYLFVTAGFGARLSTKGIMLQAPPVLGGIALAVLALPLIWNCVRLVTARTPRY
Ga0102758_107886091	3300030784	Soil	MKYLWALIGLLYALLNIYVGYILFVAGTGARLMQKGPYLQGPPILGGLALAVLALPLLWNCLRLVTAKRETY
Ga0308189_104118432	3300031058	Soil	SIHRGRFGWWRCSVKYLWVVIGVLYALLNIYVGYQFVIAGIGPKLAQKGILLQAPPFLGGIALALLALPLLWNCFRLATAKTPRY
Ga0308189_104356181	3300031058	Soil	MKYLWVLIALAYGLLNIYSGYLLFTAGIGAKLSQKGIYLQAPPILGGLAIAVLALPLIWN
Ga0308201_100238892	3300031091	Soil	MKYLWVIVGLLYSLLNIYVGYLLVTAAVGPKLTQKGILLQAPPLLGGLALAVLALPLIWNCLRLATAKTSTY
Ga0308197_103829672	3300031093	Soil	MKFLWALIGLLYALLNIYVGYLFVMAAMGPKLTQKGIALQSAPFLGGLGLAILAIPLIWNCIRLATAKPPSY
Ga0372943_0186918_611_826	3300034268	Soil	MRYLWALFGLVFGLLSIYAGYYYFTSGMTERLMQKGLLLQAPAVLSGIGLVILALPLIYQSVRLATSRPPQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052492

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences