Metagenome / Metatranscriptome Family F052480

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052480
Family Type	Metagenome / Metatranscriptome
Number of Sequences	142
Average Sequence Length	48 residues
Representative Sequence	FTTPWTATLTYVPGPDVMAEAVCAENLHQYYYDNSDTDVPRAEKPDF
Number of Associated Samples	103
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.16 %
% of genes near scaffold ends (potentially truncated)	90.85 %
% of genes from short scaffolds (< 2000 bps)	89.44 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.17

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.676 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.422 % of family members)
Environment Ontology (ENVO)	Unclassified (30.986 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.085 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.17
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.17
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF13581	HATPase_c_2	2.82
PF03401	TctC	2.11
PF01436	NHL	2.11
PF00816	Histone_HNS	1.41
PF00118	Cpn60_TCP1	1.41
PF07758	DUF1614	1.41
PF00467	KOW	1.41
PF13505	OMP_b-brl	1.41
PF01471	PG_binding_1	0.70
PF13419	HAD_2	0.70
PF07592	DDE_Tnp_ISAZ013	0.70
PF03328	HpcH_HpaI	0.70
PF13406	SLT_2	0.70
PF02517	Rce1-like	0.70
PF13751	DDE_Tnp_1_6	0.70
PF03929	PepSY_TM	0.70
PF00753	Lactamase_B	0.70
PF05231	MASE1	0.70
PF04205	FMN_bind	0.70
PF02308	MgtC	0.70
PF13557	Phenol_MetA_deg	0.70
PF01527	HTH_Tnp_1	0.70
PF04143	Sulf_transp	0.70
PF02666	PS_Dcarbxylase	0.70
PF02371	Transposase_20	0.70
PF01494	FAD_binding_3	0.70
PF00588	SpoU_methylase	0.70
PF03544	TonB_C	0.70
PF13586	DDE_Tnp_1_2	0.70
PF04412	AcnX	0.70
PF03050	DDE_Tnp_IS66	0.70
PF01546	Peptidase_M20	0.70
PF00155	Aminotran_1_2	0.70
PF07859	Abhydrolase_3	0.70
PF04055	Radical_SAM	0.70
PF00078	RVT_1	0.70
PF13426	PAS_9	0.70
PF04392	ABC_sub_bind	0.70
PF00072	Response_reg	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.11
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	1.41
COG2916	DNA-binding protein H-NS	Transcription [K]	1.41
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.41
COG4089	Uncharacterized membrane protein	Function unknown [S]	1.41
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.70
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	0.70
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.70
COG3447	Integral membrane sensor domain MASE1	Signal transduction mechanisms [T]	0.70
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.70
COG3295	Uncharacterized conserved protein	Function unknown [S]	0.70
COG3182	PepSY-associated TM region	Function unknown [S]	0.70
COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain	Translation, ribosomal structure and biogenesis [J]	0.70
COG3174	Membrane component of predicted Mg2+ transport system, contains DUF4010 domain	Inorganic ion transport and metabolism [P]	0.70
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.70
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.70
COG2391	Uncharacterized membrane protein YedE/YeeE, contains two sulfur transport domains	General function prediction only [R]	0.70
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	0.70
COG1679	Mevalonate 5-phosphate dehydratase subunit 1, aconitase superfamily (modified mevalonate pathway)	Lipid transport and metabolism [I]	0.70
COG1285	Magnesium uptake protein YhiD/SapB, involved in acid resistance	Inorganic ion transport and metabolism [P]	0.70
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.70
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.70
COG0688	Phosphatidylserine decarboxylase	Lipid transport and metabolism [I]	0.70
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.70
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.70
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.70
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.70
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.70
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	0.70
COG0565	tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferase	Translation, ribosomal structure and biogenesis [J]	0.70
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.38 %
Unclassified	root	N/A	36.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.68 %
Unclassified	root	N/A	36.62 %
Viruses	superkingdom	All Organisms → Viruses	0.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.68 %
Unclassified	root	N/A	36.62 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.87 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	13.38 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.41 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.70 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.62 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	22.54 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	11.27 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	2.11 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.41 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.70 %
uncultured bacterium BLR9	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR9	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.27 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.75 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.52 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.11 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.70 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.70 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.70 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.70 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.70 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.70 %
uncultured bacterium BLR9	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR9	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.27 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.52 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	2.11 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.11 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.11 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.70 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.70 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.70 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.70 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.70 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.70 %
Halothiobacillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Halothiobacillaceae	0.70 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.70 %
uncultured bacterium BLR9	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR9	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.27 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.52 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.11 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.11 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.41 %
unclassified Halothiobacillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Halothiobacillaceae → unclassified Halothiobacillaceae	0.70 %
Rhizobiales bacterium 35-66-30	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 35-66-30	0.70 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.70 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.70 %
Novosphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium	0.70 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.70 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.70 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.70 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.70 %
uncultured bacterium BLR9	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR9	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.27 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.52 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.11 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.41 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.70 %
Aciditerrimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Aciditerrimonas	0.70 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.70 %
Halothiobacillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Halothiobacillaceae → unclassified Halothiobacillaceae → Halothiobacillaceae bacterium	0.70 %
unclassified Novosphingobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium	0.70 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.70 %
Rhizobiales bacterium 35-66-30	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 35-66-30	0.70 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.70 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.70 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.70 %
uncultured bacterium BLR9	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR9	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.27 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.52 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.11 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.41 %
Aciditerrimonas ferrireducens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Aciditerrimonas → Aciditerrimonas ferrireducens	0.70 %
Novosphingobium sp. Rr 2-17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. Rr 2-17	0.70 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.70 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.70 %
Halothiobacillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Halothiobacillaceae → unclassified Halothiobacillaceae → Halothiobacillaceae bacterium	0.70 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.70 %
Rhizobiales bacterium 35-66-30	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 35-66-30	0.70 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.70 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.70 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.70 %
uncultured bacterium BLR9	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR9	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459009\|GA8DASG01ECU2T	Not Available	515	Open in IMG/M
3300002245\|JGIcombinedJ26739_100936583	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300002914\|JGI25617J43924_10074509	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300002917\|JGI25616J43925_10381131	Not Available	520	Open in IMG/M
3300004092\|Ga0062389_104477957	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300004152\|Ga0062386_100791220	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	781	Open in IMG/M
3300004479\|Ga0062595_101627615	Not Available	603	Open in IMG/M
3300005332\|Ga0066388_102136329	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1008	Open in IMG/M
3300005332\|Ga0066388_102288802	Not Available	977	Open in IMG/M
3300005332\|Ga0066388_105791434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 35-66-30	625	Open in IMG/M
3300005439\|Ga0070711_100411335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1100	Open in IMG/M
3300005542\|Ga0070732_10805126	Not Available	573	Open in IMG/M
3300005764\|Ga0066903_100106233	All Organisms → cellular organisms → Bacteria	3822	Open in IMG/M
3300005764\|Ga0066903_102203509	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300005764\|Ga0066903_102617818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	978	Open in IMG/M
3300005764\|Ga0066903_103054341	Not Available	906	Open in IMG/M
3300005764\|Ga0066903_106746653	Not Available	597	Open in IMG/M
3300006059\|Ga0075017_101122323	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300006086\|Ga0075019_10475959	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR9	772	Open in IMG/M
3300006162\|Ga0075030_101541215	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300006797\|Ga0066659_11620601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300007265\|Ga0099794_10003869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5792	Open in IMG/M
3300009089\|Ga0099828_11658992	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	562	Open in IMG/M
3300009143\|Ga0099792_10894329	Not Available	587	Open in IMG/M
3300009520\|Ga0116214_1272776	Not Available	645	Open in IMG/M
3300009523\|Ga0116221_1201507	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300009523\|Ga0116221_1340927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	650	Open in IMG/M
3300009524\|Ga0116225_1051319	All Organisms → cellular organisms → Bacteria → Proteobacteria	1984	Open in IMG/M
3300009672\|Ga0116215_1542582	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300009792\|Ga0126374_11176147	All Organisms → cellular organisms → Bacteria → Proteobacteria	613	Open in IMG/M
3300010159\|Ga0099796_10009904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2599	Open in IMG/M
3300010159\|Ga0099796_10444279	Not Available	576	Open in IMG/M
3300010304\|Ga0134088_10568416	Not Available	562	Open in IMG/M
3300010343\|Ga0074044_10731120	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300010358\|Ga0126370_10234936	Not Available	1411	Open in IMG/M
3300010358\|Ga0126370_10607377	Not Available	945	Open in IMG/M
3300010359\|Ga0126376_11642916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300010359\|Ga0126376_13020023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	520	Open in IMG/M
3300010360\|Ga0126372_11183333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	788	Open in IMG/M
3300010360\|Ga0126372_11529469	Not Available	704	Open in IMG/M
3300010366\|Ga0126379_12213521	Not Available	651	Open in IMG/M
3300010376\|Ga0126381_102771262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	700	Open in IMG/M
3300010376\|Ga0126381_103565726	All Organisms → cellular organisms → Bacteria → Proteobacteria	611	Open in IMG/M
3300010379\|Ga0136449_101042490	All Organisms → cellular organisms → Bacteria	1310	Open in IMG/M
3300010379\|Ga0136449_104357730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	522	Open in IMG/M
3300011270\|Ga0137391_11394697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	547	Open in IMG/M
3300012189\|Ga0137388_11107497	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300012202\|Ga0137363_10922928	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300012361\|Ga0137360_10954940	Not Available	739	Open in IMG/M
3300012363\|Ga0137390_11680295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	570	Open in IMG/M
3300012917\|Ga0137395_10542445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	839	Open in IMG/M
3300012917\|Ga0137395_10783025	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300012918\|Ga0137396_10168064	All Organisms → cellular organisms → Bacteria	1603	Open in IMG/M
3300012918\|Ga0137396_10445552	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300012922\|Ga0137394_10085760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2639	Open in IMG/M
3300012924\|Ga0137413_10614515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	815	Open in IMG/M
3300012927\|Ga0137416_10063873	All Organisms → cellular organisms → Bacteria	2642	Open in IMG/M
3300012944\|Ga0137410_11675472	Not Available	559	Open in IMG/M
3300012971\|Ga0126369_12727933	Not Available	578	Open in IMG/M
3300012971\|Ga0126369_13530465	Not Available	512	Open in IMG/M
3300014162\|Ga0181538_10314602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	848	Open in IMG/M
3300016270\|Ga0182036_10202427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1456	Open in IMG/M
3300016270\|Ga0182036_11258480	Not Available	616	Open in IMG/M
3300016294\|Ga0182041_10449931	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300016294\|Ga0182041_10664019	Not Available	921	Open in IMG/M
3300016319\|Ga0182033_10964896	Not Available	757	Open in IMG/M
3300016319\|Ga0182033_12006100	Not Available	527	Open in IMG/M
3300016341\|Ga0182035_10684378	Not Available	892	Open in IMG/M
3300016371\|Ga0182034_10541497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	976	Open in IMG/M
3300016387\|Ga0182040_10322942	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300016387\|Ga0182040_11501771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300016422\|Ga0182039_10510789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1039	Open in IMG/M
3300016422\|Ga0182039_12250766	Not Available	503	Open in IMG/M
3300016445\|Ga0182038_10724122	Not Available	868	Open in IMG/M
3300017822\|Ga0187802_10207045	Not Available	755	Open in IMG/M
3300017823\|Ga0187818_10389182	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300017961\|Ga0187778_11101297	Not Available	553	Open in IMG/M
3300017970\|Ga0187783_10204301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. Rr 2-17	1450	Open in IMG/M
3300017970\|Ga0187783_10636631	Not Available	771	Open in IMG/M
3300017972\|Ga0187781_10328882	Not Available	1086	Open in IMG/M
3300017972\|Ga0187781_11015675	Not Available	607	Open in IMG/M
3300018085\|Ga0187772_11274481	Not Available	543	Open in IMG/M
3300020199\|Ga0179592_10012652	All Organisms → cellular organisms → Bacteria	3675	Open in IMG/M
3300021181\|Ga0210388_11735934	Not Available	516	Open in IMG/M
3300021403\|Ga0210397_10389676	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300021432\|Ga0210384_10368351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1294	Open in IMG/M
3300021432\|Ga0210384_11118515	Not Available	691	Open in IMG/M
3300021560\|Ga0126371_10549347	Not Available	1304	Open in IMG/M
3300021861\|Ga0213853_10090995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	617	Open in IMG/M
3300021861\|Ga0213853_10454846	Not Available	715	Open in IMG/M
3300022715\|Ga0242678_1072994	Not Available	534	Open in IMG/M
3300022718\|Ga0242675_1090429	Not Available	575	Open in IMG/M
3300026514\|Ga0257168_1018183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1429	Open in IMG/M
3300026551\|Ga0209648_10026792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5039	Open in IMG/M
3300027070\|Ga0208365_1004260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1699	Open in IMG/M
3300027512\|Ga0209179_1138936	Not Available	543	Open in IMG/M
3300027652\|Ga0209007_1120648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Aciditerrimonas → Aciditerrimonas ferrireducens	656	Open in IMG/M
3300027667\|Ga0209009_1009434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	2326	Open in IMG/M
3300027842\|Ga0209580_10501360	Not Available	604	Open in IMG/M
3300027903\|Ga0209488_10121886	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1962	Open in IMG/M
3300028536\|Ga0137415_10102298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2717	Open in IMG/M
3300031474\|Ga0170818_114071646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300031640\|Ga0318555_10771932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	519	Open in IMG/M
3300031715\|Ga0307476_10848869	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300031719\|Ga0306917_10952660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	671	Open in IMG/M
3300031736\|Ga0318501_10092772	All Organisms → cellular organisms → Bacteria → Acidobacteria	1495	Open in IMG/M
3300031736\|Ga0318501_10587838	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300031736\|Ga0318501_10820487	All Organisms → cellular organisms → Bacteria → Proteobacteria	516	Open in IMG/M
3300031771\|Ga0318546_10156594	All Organisms → cellular organisms → Bacteria → Acidobacteria	1538	Open in IMG/M
3300031796\|Ga0318576_10196587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	948	Open in IMG/M
3300031797\|Ga0318550_10097534	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1383	Open in IMG/M
3300031833\|Ga0310917_10769501	Not Available	651	Open in IMG/M
3300031879\|Ga0306919_11033912	Not Available	628	Open in IMG/M
3300031890\|Ga0306925_10304609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1714	Open in IMG/M
3300031890\|Ga0306925_10696413	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300031890\|Ga0306925_10773163	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300031890\|Ga0306925_11865380	Not Available	573	Open in IMG/M
3300031897\|Ga0318520_10415925	Not Available	823	Open in IMG/M
3300031910\|Ga0306923_10928373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	951	Open in IMG/M
3300031910\|Ga0306923_12561040	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300031912\|Ga0306921_10986901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	951	Open in IMG/M
3300031912\|Ga0306921_11414808	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300031912\|Ga0306921_11585566	Not Available	712	Open in IMG/M
3300031942\|Ga0310916_10776495	Not Available	808	Open in IMG/M
3300031954\|Ga0306926_10225637	Not Available	2324	Open in IMG/M
3300031962\|Ga0307479_11538494	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300032001\|Ga0306922_12394496	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300032025\|Ga0318507_10424669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300032039\|Ga0318559_10502961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Halothiobacillaceae → unclassified Halothiobacillaceae → Halothiobacillaceae bacterium	565	Open in IMG/M
3300032064\|Ga0318510_10484515	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300032076\|Ga0306924_10977562	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300032091\|Ga0318577_10100135	All Organisms → cellular organisms → Bacteria → Acidobacteria	1356	Open in IMG/M
3300032160\|Ga0311301_10096446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5837	Open in IMG/M
3300032160\|Ga0311301_10258383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2858	Open in IMG/M
3300032160\|Ga0311301_10744113	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300032180\|Ga0307471_100295539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1703	Open in IMG/M
3300032261\|Ga0306920_100930751	Not Available	1269	Open in IMG/M
3300032261\|Ga0306920_103957571	Not Available	539	Open in IMG/M
3300033289\|Ga0310914_11551974	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.96%
Aquatic	Environmental → Aquatic	7.04%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.96%
Freshwater	Environmental → Aquatic → Freshwater	4.93%
Sediment	Environmental → Aquatic → Sediment	2.11%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.17%
Loam	Environmental → Terrestrial → Soil → Loam	9.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.11%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.41%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.15%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.11%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.41%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.41%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.42%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.49%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.86%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.04%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.34%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.23%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.82%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.11%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.11%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.11%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	1.41%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.41%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.41%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.41%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.70%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.70%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F47_01431940	2170459009	Grass Soil	DGRGRGRFHTPWTATLTYVPGPDVPAESVCAENIHQYYYDHSDAEVPRTEKPDF
JGIcombinedJ26739_1009365831	3300002245	Forest Soil	DEGVFTTPWTSTLTYVPGPDVFPEVVCAENTHQYYYKNEADVPRAEKPDF*
JGI25617J43924_100745091	3300002914	Grasslands Soil	KGVFTTPWTSTLTYVPGPSTWPEVVCAENPHQYYYDGSDTDVPRADKPDF*
JGI25616J43925_103811311	3300002917	Grasslands Soil	VFTTPWTSTLTYVPGPSTWPEVVCAENPRQYYYDGSDTDVPRADKPDF*
Ga0062389_1044779571	3300004092	Bog Forest Soil	TLTYVPGPDKIQEGVCAENIHQYYYKNDAAVPRAEKPDF*
Ga0062386_1007912203	3300004152	Bog Forest Soil	GVFTTPWTSTLTYVPGPSTWPEVVCAENPHQYYYDRSDTDVPRADEPDF*
Ga0062595_1016276152	3300004479	Soil	EDEGAFTMPWTATMTYVPGPSGWSESICAENTHQYYYDGIDANVPHADNPDF*
Ga0066388_1021363291	3300005332	Tropical Forest Soil	AGAFTTPWTATLTYVPGPEFLREVVCAENRAQYYYNNDADVPTADKPDF*
Ga0066388_1022888021	3300005332	Tropical Forest Soil	VFTTPWTATLTYVPGSDVLGEAVCAENPHQYYYDGSDSNIPHAEKPDF*
Ga0066388_1057914341	3300005332	Tropical Forest Soil	LTYVPGPDGPSESVCAENIHQYYYDRSDANVPRADNPDF*
Ga0070711_1004113351	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VFTTPWTSTLTYVPRPDIASESVCADNLHQYYYDHSDTNAPRADKPDF*
Ga0070732_108051261	3300005542	Surface Soil	GVFTTPWTATLTYVPGNDVLGEAVCAENPHQYYYDGSDSNIPHAEKSDF*
Ga0066903_1001062335	3300005764	Tropical Forest Soil	TLTYVPGPDQLAEEVCAENTHQYYYNNEADIPRADKPDF*
Ga0066903_1022035091	3300005764	Tropical Forest Soil	GPDTWPEVVCAENRNQYYYSREETDVPRADKPDF*
Ga0066903_1025664552	3300005764	Tropical Forest Soil	VTIEDEGVFTTPWTATLTYVPSNDQFPEVVCAENVRWFPRTEATVPIAHKPDF*
Ga0066903_1026178182	3300005764	Tropical Forest Soil	GVFTTPWTATLTYVPGSDVLGEAVCAENPHQYYYDGSDSNIPHAEKPDF*
Ga0066903_1030543411	3300005764	Tropical Forest Soil	IEDEGVFTTPWTATLTYVPGPDVMAESVCAENLHQYYYDNSDTNAPRAEKPDF*
Ga0066903_1067466531	3300005764	Tropical Forest Soil	TPWTATLTYVPGPDQLAEEVCAENTQQYYYDNVADIPRADKPDF*
Ga0075017_1011223232	3300006059	Watersheds	TTPWTATLTYVPGPDQLAEEVCAENTHQYYYNNEADVPRADKPDF*
Ga0075019_104759591	3300006086	Watersheds	TLTYVPGPDVMSEAVCAENPHQYYYDRSDTDVPRTEKLDF*
Ga0075030_1015412152	3300006162	Watersheds	VFTTPWTATLTYVPGPDTWPEVVCAENRSQYYSNDETDVPRAEKPDF*
Ga0066659_116206011	3300006797	Soil	MAWTATLTYVPGPNRWSESVCAENVHQYYYDGSDANVPRAEKPDF*
Ga0099794_100038691	3300007265	Vadose Zone Soil	QLELTIEDKDVFTTPWTSMLTYVPGPSTWPEVVCAENPRQYYYDGSDTDVPRADKPDF*
Ga0099828_116589921	3300009089	Vadose Zone Soil	LQLHLTIEDEGVFTTPWTATLTYVPGPDVMSEAVCAENLHQYYYDHSDTDVPRAEKLDF*
Ga0099792_104997811	3300009143	Vadose Zone Soil	HVTIEDEGVFTTPWTSTLTYVPSNDQFPEVVCAENLRWFPGTEASVPTADKPDF*
Ga0099792_108943291	3300009143	Vadose Zone Soil	VFTTPWTSTLTYVPRPDIASEAVCADNLRQYYYDHSDTDAPRADKPDF*
Ga0116214_12727762	3300009520	Peatlands Soil	VFTTPWTATLTYVPGPDEWREAVCAENTHQYYYNNEADVPRAEKPDF*
Ga0116221_12015072	3300009523	Peatlands Soil	TLTYVPGPDQLSEEVCAENTHQYYYSNEADVPRADKPDF*
Ga0116221_13409271	3300009523	Peatlands Soil	YVPGPDQVSEGVCAENIQQYYTKDEADVPRAAKPDF*
Ga0116225_10513194	3300009524	Peatlands Soil	VFTTPWTATLTYVPGPDQIQESVCSENLKFYPGRDADVPRAEKPDF*
Ga0116215_15425821	3300009672	Peatlands Soil	TPWTATLTYVPGPDQLSEEVCAENTHQYYYSNEADVPRADKPDF*
Ga0126374_111761471	3300009792	Tropical Forest Soil	TATLTYVPGPDVMPEAVCAENLHQYYYDHSDTDAPRAENPDF*
Ga0099796_100099041	3300010159	Vadose Zone Soil	TTPWTSTLTYVPGPSTWPEVVCAENPRQYYYDGSDTDVPRADKPDF*
Ga0099796_104442791	3300010159	Vadose Zone Soil	LRQRDEGVFTTPWTATLTYVPGPDVVSEAVCAENLRQYYYDHSDTNVPHAEKPDF*
Ga0134088_105684161	3300010304	Grasslands Soil	FTMPWTATLTYVPGPNGWSESVCAENRHQYYYDGSDANVPRADKPDF*
Ga0074044_107311202	3300010343	Bog Forest Soil	VTIEDEGVFTTPWTATLTYVPGPDQLAEEVCAENTHQYYYDNEADVPHADKSDF*
Ga0126370_102349362	3300010358	Tropical Forest Soil	TIEDEGVFTTPWTATLTYVPGPDVMPEAVCAENLHQYYYDNSDTDAPRAENPDF*
Ga0126370_106073772	3300010358	Tropical Forest Soil	TTPWTATLTYVPGPDQLAEEVCAENTHQYYYNNEADIPRADKPDF*
Ga0126376_116429161	3300010359	Tropical Forest Soil	QLHVTIEDEGVFTTPWFATLTYVPGPDVLSEAVCAENVHQYYYVFSDTNVPRAEKPVF*
Ga0126376_130200232	3300010359	Tropical Forest Soil	VPGPTGWSESVCAENVHQYYYDGSDANVPRADKPDF*
Ga0126372_111703922	3300010360	Tropical Forest Soil	VTIEDEGVFTTPWTATLTYVPSNDQFPEVVCAENMRWFPRTEATVPIAHKPDF*
Ga0126372_111833331	3300010360	Tropical Forest Soil	SATLTYVPGPDVLSEAVCAENVHQYYYDFSDTNVPRAEKPDF*
Ga0126372_115294692	3300010360	Tropical Forest Soil	FLQLELTIEDKGVFTTPWTSTLTYVPGPSTWPEVVCAENPHQYYYDNSDTDVPHAEKPDF
Ga0126379_122135211	3300010366	Tropical Forest Soil	IEDGGVFTTPWTATLTYVPGPDVAAEAVCAENLHQYYYDNSDTNAPRAEKPDF*
Ga0126381_1027712621	3300010376	Tropical Forest Soil	GPSTWPEVVCAENPHQYYYDGSDADVPRADKPDF*
Ga0126381_1035657262	3300010376	Tropical Forest Soil	ELTIEDKGVFTTPWTSTLTYVPGPATWPEVVCAENPHQYYYDGSDTDVPRAEKPDF*
Ga0136449_1010424904	3300010379	Peatlands Soil	VFTTPWSATLTYVPGPDVPSESVCAEDIHQYYYDRSDADVPRTEKPDF*
Ga0136449_1043577302	3300010379	Peatlands Soil	VFTAPWTSTLTYVPGPDQVSEGVCAENIQQYYTKDEADVPRAAKPDF*
Ga0137391_113946972	3300011270	Vadose Zone Soil	ATLTYVPRTDLFPEAVCAENRAQYYYNNEADVPTADKPDF*
Ga0137388_111074971	3300012189	Vadose Zone Soil	GKFLQLHVTIEDEGVFTTSWTSTLTYVPSNDQFPEVVCAENLRWFPGTEASVPTADKPDF
Ga0137363_109229281	3300012202	Vadose Zone Soil	TIEDKGVFTTPWTSTLTYVPGPSTWPEVVCAENPRQYYYDGSDTDVPRADKPDF*
Ga0137360_109549401	3300012361	Vadose Zone Soil	VHLTVEDEGALTKSWTATLTYVPGPSRWSESVCAENVHQYYYDGSDANVPRADKPDF*
Ga0137390_116802952	3300012363	Vadose Zone Soil	DEGVFTTPWTATLTYVPGPDVLSEVVCAENLHQYYYDRSDTNAPRAEKPDF*
Ga0137395_105424452	3300012917	Vadose Zone Soil	WTATLTYVPGPDVLREAVCAENVHQYYYDHSDANVPRAEKLDF*
Ga0137395_107830252	3300012917	Vadose Zone Soil	PGPSTWPEVVCAENPRQYYYDGSDTDVPRADKPDF*
Ga0137396_101680643	3300012918	Vadose Zone Soil	LRQRDEGVFTTPWTATLTYVPGPDVVSEAVCAENLHQYYYDHSDTNVPHAEKPDF*
Ga0137396_104455521	3300012918	Vadose Zone Soil	WTSTLTYVPGPSTWPEVVCAENPRQYYYDGSDTDVPRADKPDF*
Ga0137394_100857602	3300012922	Vadose Zone Soil	LRQRDEGVFTTPWTATLTYVPGPDVVSEAICAENLHQYYYDHSDTNVPHAEKPDF*
Ga0137413_106145153	3300012924	Vadose Zone Soil	PGPDVLGEVVCADNVRQYYYDRSDTDVPRTEKPDF*
Ga0137416_100638732	3300012927	Vadose Zone Soil	LRQRDEGVFTTPWTATLTYVPGPDVVSEAICAENLHQYYYDHSDTNVPHAEKPD
Ga0137410_116754721	3300012944	Vadose Zone Soil	STLTYVPGPSTWPEVVCAENPRQYYYDGSDTDVPRADKPDF*
Ga0126369_127279331	3300012971	Tropical Forest Soil	GPDGPSESVCAENIHQYYYDRSDADVPRADKPDF*
Ga0126369_135304651	3300012971	Tropical Forest Soil	DKGVFTAPWTSTLTYVPGPGTWPEVVCAENPHQYYYDGSDTDVPHADKPDF*
Ga0181538_103146022	3300014162	Bog	PWTATLTYVPGHDYLPEEVCAENRHQYYYDHSDANVPRAEKPDF*
Ga0182036_102024271	3300016270	Soil	TTPWTATLTYVPGPDVLAEAVCAENLHQYYYDNSDTNAPRAEKPDF
Ga0182036_112584802	3300016270	Soil	TYVPGPDTWSEVVCAENTHQYYYNNEADVPRAEKPDF
Ga0182041_104499311	3300016294	Soil	LQLHLTIEDEGVFTTPWTATLTYVPGPEQLPETVCAENRHQYYYDHSDANVPRAEKPDF
Ga0182041_106640192	3300016294	Soil	TATLTYVPGADVLGEAVCAENPHQYYYDGSDSNIPHAEKPDF
Ga0182033_109648963	3300016319	Soil	VFTTPWTATLTYVPGPDQFPETVCAENRHQYYYNNEADVPRAEKPDF
Ga0182033_120061001	3300016319	Soil	TTLTYVPGPDVLSESVCAENPHQYYYDGSDSNIPHAEKPDF
Ga0182035_106843784	3300016341	Soil	VFTTPWTATLTYVPGPYQFPETVCAENRHQYYYNNEADVPRADKPDF
Ga0182034_105414972	3300016371	Soil	VTIEDEGVFTTPWTATLTYVPGPDQLPETVCAENRAQYYYKNEADVPKADRPDF
Ga0182040_103229421	3300016387	Soil	GVFTTPWTATLTYVPGSNAPSEAICAENVHQYYYDRSDANVPHADKPDF
Ga0182040_115017711	3300016387	Soil	HLTIEDEGVFTTPWTATLTYVPGPDQLPETVCAENRHQYYYNNEADVPRAEKPDF
Ga0182039_105107892	3300016422	Soil	QLELTIEDKGVFTTPWTSTLTYVPGPSTWPEVVCAENPHQYYYDGSDTDVPRADKPDF
Ga0182039_122507661	3300016422	Soil	HLTVEDEGVFTTPWTATLTYVPGSNAPSESICAENVHQYYYDRSDAKVPHADKPDF
Ga0182038_107241222	3300016445	Soil	EGVFTTPWTATLTYVPGPDQFPETVCAENRHQYYYNNEADVPRAEKPDF
Ga0187802_102070451	3300017822	Freshwater Sediment	LTIEDEGVFTTPWTATLTYVPRPDVASEAVCADNLHQYYYDHSDTNVPRADKPDF
Ga0187818_103891821	3300017823	Freshwater Sediment	LQLTVEDEGVFTTPWSATLTYVPGPDVPSESVCAENIHQYYYDRSDADVPRTEKPDF
Ga0187778_111012972	3300017961	Tropical Peatland	LHDPWSATLTYVPGPDVASESVCAENIHQYYYDRSDADVPRTEKPDF
Ga0187783_102043012	3300017970	Tropical Peatland	VTVEDEEVFTAPWSATVTYVPGDQLGEGVCAENLHQYYYKDEADVPVAEKPDF
Ga0187783_106366311	3300017970	Tropical Peatland	DGVFTTPWTATLTYVPGEENHLPEEVCAENIQQYYYKNETDLPRSEKPDF
Ga0187781_103288822	3300017972	Tropical Peatland	EDDGVFTTPWTTTLTYVPGPAQMAEGVCSENIQQYYTKDQADVPRAETADF
Ga0187781_110156752	3300017972	Tropical Peatland	PGPDVPAESVCAENIHQYYYDHSDADVPRTEKPDF
Ga0187772_112744811	3300018085	Tropical Peatland	VTIEDEGVFTAPWTATITYVPGPDVLGEAVCADNVRQYYYDRSDTDVPRTEKPDF
Ga0179592_100126521	3300020199	Vadose Zone Soil	LRQRDEGVFTTPWTATLTYVPGPDVVSEAICAENLHQYYYDHSDTNVPHAEKPDF
Ga0210388_117359342	3300021181	Soil	ATLTYVPGPAVLPENVCAENIHQYYYDRSDTDVPRAEKPDF
Ga0210397_103896762	3300021403	Soil	EGVFTTPWTATLTYVPGPDQLPETVCAENRAQYYYNNEADVPRADKPDF
Ga0210384_103683511	3300021432	Soil	YVPSANLPGESICAENIHQYYYDRSDADVPRTEKPDF
Ga0210384_111185152	3300021432	Soil	TLTYVPGSDVLGEAVCAENPHQYYYDGSDSNIPHAAKPDF
Ga0126371_105493471	3300021560	Tropical Forest Soil	GVFTTPWTSTLTYVPGPSTWPEVVCAENPHQYYYDGSDADVPRADKPDF
Ga0213853_100909951	3300021861	Watersheds	LTYVPGPDTWPEVVCAENRNQYYSNDETDVPRAEKPDF
Ga0213853_104548461	3300021861	Watersheds	PWTATLTYVPGPDQLPETVCAENRHQYYYGNQDADVPRADKPDF
Ga0242678_10729941	3300022715	Soil	ATLTYVPGPDQFPEEVCAENLHQYYYHNDTDAPRADKPDF
Ga0242675_10904291	3300022718	Soil	TLTYVPGADVLGESVCAENPHQYYYDGSDSNIPHAEKPDF
Ga0257168_10181833	3300026514	Soil	AVQCDGSYDGVFTTPWTATLTYVPGPDVLSEAVCAENLHQYYYDNSDTNVPHAEKLDF
Ga0209648_100267928	3300026551	Grasslands Soil	QLELTIEDKGVFTTPWTSTLTYVPGPSTWPEVVCAENPRQYYYDGSDTDVPRADKPDF
Ga0208365_10042602	3300027070	Forest Soil	TLTYVPSANLPGESICAENIHQYYYDRSDADVPRTEKPDFW
Ga0209179_11389361	3300027512	Vadose Zone Soil	FTTPWTATLTYVPGPDVMAEAVCAENLHQYYYDNSDTDVPRAEKPDF
Ga0209007_11206482	3300027652	Forest Soil	EDEGVFTTPWTSTLTYVPGPDVFPEVVCAENTHQYYYKNEADVPRAEKPDF
Ga0209009_10094342	3300027667	Forest Soil	MSYVPGPDVWVETVCAENTHQYYYNNEADVPRTEKPDF
Ga0209580_105013603	3300027842	Surface Soil	ATLTYVPGPDLWPERVCAENTHQYYYNNEADVPRAERPDF
Ga0209488_101218861	3300027903	Vadose Zone Soil	TYVPGPSTWPEVVCAENPRQYYYDGSDTDVPRADKPDF
Ga0137415_101022982	3300028536	Vadose Zone Soil	LRQRDEGVFTTPWTATLTYVPGPDVVSEAVCAENLHQYYYDHSDTNVPHAEKPDF
Ga0170818_1140716461	3300031474	Forest Soil	LTIEDEGVFTTPWTSTLTYVPRPDIASESVCADNLHQYYYDHSDTNAPRADKPDF
Ga0318555_107719321	3300031640	Soil	TVTYVPGDDSFPEEVCAENVHQYYYDHSDTNVPRAEKPDF
Ga0307476_108488691	3300031715	Hardwood Forest Soil	LHLTVEDEGVFTTPWTATLTYVPRPDIPAESVCAENVHQYYYDHSDADVPRTEKRDF
Ga0306917_109526601	3300031719	Soil	TYVPGPSTWPEVVCAENPHQYYYDGSDTDVPRADKPDF
Ga0318501_100927722	3300031736	Soil	PWTATLTYVPGPELLPEVVCAENRAQYYYHDDADVPAADKPDF
Ga0318501_105878382	3300031736	Soil	LHVTIEDEGVFTTPWTATLTYVPGPDVLAEAACAENLHQYYYDNSDTKAPQADKPDF
Ga0318501_108204872	3300031736	Soil	VLQLHLTIEDTGAFTTPWTATLTYVPAREQLFAETVCAENRSQYYYNNEADVPTASKPDF
Ga0318546_101565941	3300031771	Soil	LTYVPGPELLPEVVCAENRAQYYYHDDADGQAADKPDF
Ga0318576_101965872	3300031796	Soil	TTPWTSTLTYVPRPDIASEAVCADNLHQYYYDHSDTDAPHADKPDF
Ga0318550_100975342	3300031797	Soil	LTIEDEGVFTTPWTATLTYVPGPDILSEVVCAENRHQYYYDHSDANVPRAEKSDF
Ga0310917_107695013	3300031833	Soil	DEGVFTTPWTATLTYVPGPDQFPETVCAENRRQYYYNNEAEVPRAEKPDF
Ga0306919_110339121	3300031879	Soil	TTPWTATLTYVPGPDGPSESVCAENIHQYYYDRSDANVPRADKPDF
Ga0306925_103046093	3300031890	Soil	LTIEDAGAFTTPWTATLTYVPGPELLREVVCAENRAQYYYNNDADVPTADKPDF
Ga0306925_106964131	3300031890	Soil	FTTPWTSTLTYVPGPPDLSENVCAENVHQYYYDRSDTDVPRAEKPDF
Ga0306925_107731631	3300031890	Soil	TIEDEGVFTIPWTALTYVPGPDQFPETVCAENRHQYYYNNEADVPRAEKPDF
Ga0306925_118653801	3300031890	Soil	ATLTYVPGPDVLSEAVCSENPHQYYYDRSDSNVPRAKKPDF
Ga0318520_104159252	3300031897	Soil	LTIEDEGVFTTPWTATLTYVPGPDQFPETVCAENRHQYYYNNEADVPRAEKPDF
Ga0306923_109283732	3300031910	Soil	FTTPWTATLTYVPGPDQLPETVCAESRHQYYYNNEADVPRAEKPDF
Ga0306923_125610401	3300031910	Soil	LTVEDEGVFTTPGTATLTYVPGSNAPSEAICAENVHQYYYDRSDANVPHADKPDF
Ga0306921_109869011	3300031912	Soil	ATLTYVPGPDQWPEVVCAENRNQYYYSREETDVPRADKPDF
Ga0306921_114148082	3300031912	Soil	HLTIEDEGVFTTPWTATLTYVPGPDQLPETVCAESRHQYYYNNEADVPRAEKPDF
Ga0306921_115855662	3300031912	Soil	FTTPWTATLTYVPGPDVLAEAVCAENLHQYYYDNSDTKAPQADKPDF
Ga0310916_107764952	3300031942	Soil	EDEGVFTTPWTATLTYVPGPDGPSESVCAENRHQYYYDRSDVDVPRADKPDF
Ga0306926_102256371	3300031954	Soil	STLTYVPGPPDLSENVCAENVHQYYYDRSDTDVPRAEKPDF
Ga0307479_115384941	3300031962	Hardwood Forest Soil	ATLTYVPGPDQLPETVCAENRAQYYYNNEADVPRADKPDF
Ga0306922_123944961	3300032001	Soil	VHLTIEDEDVFTTPWTATLTYVPGNDVLGEAVCAENPHQYYYDGSDSNIPHAEKPDF
Ga0318507_104246692	3300032025	Soil	LHLTVEDEGVFTTPWTATLTYVPGPDVPAESVCAENIHQYYYDHSDADVPRTEKPDF
Ga0318559_105029611	3300032039	Soil	LQLHLTIEDEGVFTTPWTSTLTYVPGPELLPEAVCAENLHQYYYDRRDVDAPRADKPDF
Ga0318510_104845152	3300032064	Soil	PWTATLTYVPGPDILSEVVCAENRHQYYYDHSDANVPRAEKPDF
Ga0306924_109775622	3300032076	Soil	TATLTYVPGPDQWPEVVCAENRNQYYYSREETDVPRADKPDF
Ga0318577_101001352	3300032091	Soil	FASPWTATLTYVPGPELLPEVVCAENRAQYYYHDDADVPAADKPDF
Ga0311301_100964461	3300032160	Peatlands Soil	WTATLTYVPGPDIWPEVVCAENRSQYYTNDETDVPRADKPDF
Ga0311301_102583831	3300032160	Peatlands Soil	IEDGGAFTTPWTATLTYVPGPDLMAEAVCAENRAQYYYKNEADVPTAAKPDF
Ga0311301_107441131	3300032160	Peatlands Soil	HLTIEDEGVFTTPWTATLTYVPGPDVLSESICAENPHQYYYDHSDSNLPRAEKPDF
Ga0307471_1002955391	3300032180	Hardwood Forest Soil	DDGVFTTPWTATLTYVPGDDQLPEEVCAENRHQYYFNNETDVPRADKPDF
Ga0306920_1009307512	3300032261	Soil	TLTYVPGADVLGEAVCAENPHQYYYDGSDSNIPHAEKPDF
Ga0306920_1039575711	3300032261	Soil	GRFHHAVTATLTYVPGPDGPSESVCAENIHQYYYDRSDANVPRADKPDF
Ga0310914_115519741	3300033289	Soil	EDEGVFTTPWTATLTYVPGPDTWPEVICAENRNQYYYSREETDVPRADKPDF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052480

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences