NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F052459

Metagenome Family F052459

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F052459
Family Type Metagenome
Number of Sequences 142
Average Sequence Length 50 residues
Representative Sequence TDKHGYVTDRPEGGLDHAIDAARYGCMMSLSQKAQSKGTYAISIGKYKY
Number of Associated Samples 100
Number of Associated Scaffolds 142

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 2.82 %
% of genes from short scaffolds (< 2000 bps) 1.41 %
Associated GOLD sequencing projects 94
AlphaFold2 3D model prediction Yes
3D model pTM-score0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (97.183 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake
(37.324 % of family members)
Environment Ontology (ENVO) Unclassified
(64.085 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(61.268 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 32.47%    β-sheet: 0.00%    Coil/Unstructured: 67.53%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.29
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 142 Family Scaffolds
PF13392HNH_3 2.82
PF11500Cut12 2.11
PF13489Methyltransf_23 1.41
PF10109Phage_TAC_7 0.70
PF04466Terminase_3 0.70

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 142 Family Scaffolds
COG1783Phage terminase large subunitMobilome: prophages, transposons [X] 0.70


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A97.18 %
All OrganismsrootAll Organisms2.82 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003277|JGI25908J49247_10021496All Organisms → Viruses → Predicted Viral1914Open in IMG/M
3300005584|Ga0049082_10016613All Organisms → Viruses → Predicted Viral2525Open in IMG/M
3300010885|Ga0133913_11256069All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1895Open in IMG/M
3300034061|Ga0334987_0110627All Organisms → Viruses → Predicted Viral2091Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake37.32%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater13.38%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment8.45%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater7.75%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton4.93%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater4.23%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater3.52%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake3.52%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous2.82%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake2.11%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water2.11%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic1.41%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine1.41%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.70%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater0.70%
LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic0.70%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake0.70%
Marine PlanktonEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton0.70%
Macrotidal RiverEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Macrotidal River0.70%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater0.70%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.70%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland0.70%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine0.70%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300001848Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM47, ROCA_DNA265_0.2um_TAP-S_3aEnvironmentalOpen in IMG/M
3300002098Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B7 metagenomeEnvironmentalOpen in IMG/M
3300002277Freshwater microbial communities from Lake Mendota, WI - 26OCT2012 deep hole epilimnionEnvironmentalOpen in IMG/M
3300002278Freshwater microbial communities from Lake Mendota, WI - 22OCT2012 deep hole epilimnionEnvironmentalOpen in IMG/M
3300002362Freshwater microbial communities from Lake Mendota, WI - 03AUG2012 deep hole epilimnionEnvironmentalOpen in IMG/M
3300003277Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SDEnvironmentalOpen in IMG/M
3300003393Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DDEnvironmentalOpen in IMG/M
3300003394Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SNEnvironmentalOpen in IMG/M
3300003512Macrotidal river microbial communities from the South Alligator River system, Northern Australia - Sample CTD2 sed R1EnvironmentalOpen in IMG/M
3300004460Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300005528Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaGEnvironmentalOpen in IMG/M
3300005584Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRFEnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300006805Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNAEnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300007670Estuarine microbial communities from the Columbia River estuary - metaG 1449C-3EnvironmentalOpen in IMG/M
3300008107Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NAEnvironmentalOpen in IMG/M
3300008116Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NAEnvironmentalOpen in IMG/M
3300008117Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008120Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NAEnvironmentalOpen in IMG/M
3300008264Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-53-LTREnvironmentalOpen in IMG/M
3300008266Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008448Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigsEnvironmentalOpen in IMG/M
3300008450Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigsEnvironmentalOpen in IMG/M
3300009151Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaGEnvironmentalOpen in IMG/M
3300009159Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaGEnvironmentalOpen in IMG/M
3300009169Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300011010Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface IceEnvironmentalOpen in IMG/M
3300013126 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10mEnvironmentalOpen in IMG/M
3300017701Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300017716Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.DEnvironmentalOpen in IMG/M
3300017722Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017723Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300017747Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.NEnvironmentalOpen in IMG/M
3300017754Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.DEnvironmentalOpen in IMG/M
3300017761Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017766Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.DEnvironmentalOpen in IMG/M
3300017774Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017777Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017778Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017780Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300017784Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017785Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020530Freshwater microbial communities from Lake Mendota, WI - 22OCT2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020549Freshwater microbial communities from Lake Mendota, WI - 12OCT2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021091Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015055 Kigoma Offshore 40mEnvironmentalOpen in IMG/M
3300021141Freshwater microbial communities from Lake Mendota, WI - Practice 15JUN2010 epilimnionEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300022179Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.NEnvironmentalOpen in IMG/M
3300022190Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.NEnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300024350Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepA_8dEnvironmentalOpen in IMG/M
3300024512Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepC_0hEnvironmentalOpen in IMG/M
3300024513Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepA_8hEnvironmentalOpen in IMG/M
3300025635Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025655Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027210Estuarine microbial communities from the Columbia River estuary - metaG 1449C-3 (SPAdes)EnvironmentalOpen in IMG/M
3300027467Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepB_8hEnvironmentalOpen in IMG/M
3300027631Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)EnvironmentalOpen in IMG/M
3300027688Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DN (SPAdes)EnvironmentalOpen in IMG/M
3300027697Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN (SPAdes)EnvironmentalOpen in IMG/M
3300027749Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027772Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027785Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027798Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027808Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)EnvironmentalOpen in IMG/M
3300028275Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepB_8dEnvironmentalOpen in IMG/M
3300031707Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20EnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300031772Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20EnvironmentalOpen in IMG/M
3300031784Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112EnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300031834Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300031952Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40EnvironmentalOpen in IMG/M
3300031963Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116EnvironmentalOpen in IMG/M
3300031999Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20EnvironmentalOpen in IMG/M
3300032046Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40EnvironmentalOpen in IMG/M
3300032050Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122EnvironmentalOpen in IMG/M
3300032053Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16EnvironmentalOpen in IMG/M
3300032093Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117EnvironmentalOpen in IMG/M
3300032118Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15EnvironmentalOpen in IMG/M
3300032173Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_topEnvironmentalOpen in IMG/M
3300033993Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037EnvironmentalOpen in IMG/M
3300033996Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004EnvironmentalOpen in IMG/M
3300034061Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028EnvironmentalOpen in IMG/M
3300034062Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045EnvironmentalOpen in IMG/M
3300034066Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087EnvironmentalOpen in IMG/M
3300034102Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112EnvironmentalOpen in IMG/M
3300034104Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120EnvironmentalOpen in IMG/M
3300034105Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127EnvironmentalOpen in IMG/M
3300034106Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131EnvironmentalOpen in IMG/M
3300034112Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191EnvironmentalOpen in IMG/M
3300034120Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2014-rr0172EnvironmentalOpen in IMG/M
3300034283Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061EnvironmentalOpen in IMG/M
3300034356Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ13530_11039997013300001213WetlandLDHLIDAARYACMMKLSVQAQKKGQYAITIGKYKY*
RCM47_108503213300001848Marine PlanktonNLINEMYGYEWAVDKNGYVTDNPQGGLDHLIDAARYCCMMKLSQKAQTKGKYVVSFH*
JGI24219J26650_100518553300002098LenticWGVDKHQHVTDKPEGGLDHLIDAARYGCMMRLSNVATAKGKYVITIR*
B570J29592_10744813300002277FreshwaterYVTDRPEGGLDHGIDAARYGCMMSLSQKAQAKGTYAITIGNLRY*
B570J29590_10530013300002278FreshwaterRPEGGLDHAIDAARYGCMMSLSQKAQAKGTYAITIGNLRY*
B570J29607_10375313300002362FreshwaterGYVTDRPEGGLDHGIDAARYGCMMSLSQKAQAKGTYAITIGNLRY*
JGI25908J49247_1002149663300003277Freshwater LakeNEMYAYQYITDKYGYVTDKPEGGLDHAIDAARYACMMKLSVKAQKKGTYAISVGKYSNF*
JGI25908J49247_1010285913300003277Freshwater LakeLRTSQNLINEMYAYQYITDKYGYVTDKPEGGLDHAIDAARYAVMMKLSVKAQRKGTYAISVGKYSNF*
JGI25909J50240_100978813300003393Freshwater LakeNEMYAYQXETDKHGYTTDRPEGGLDHAIDAARYGCMMSLSQKAVNKGTYAISIGKYKY*
JGI25909J50240_101439413300003393Freshwater LakeHGYTTDRPEGGLDHAIDAARYGCMMSLSQKAQKKGTYAITIGQHKY*
JGI25907J50239_107757633300003394Freshwater LakeQNLINEMYAYQYASDKHGYVTNTPEGGLDHLLDAARYVGMMKLTQKAQTKGTYAISIGKYANF*
SACTD2sed_102093113300003512Macrotidal RiverLKTSQNLINEMYAYQYATDKNGYTTDTPEGGLDHLIDAARYGCMMRLSQKAQNKGTYAITIGKYKY*
Ga0066222_114064613300004460MarineTTDNPEGGLDHLIDAARYVAMMKLSVKAQAKGTYAISIGKYRY*
Ga0068872_1054467113300005528Freshwater LakeYQYAQDKYGYVTDVPEGGLDHLIDAARYCCMMKLSQQAQNKGKYAITIGNIKY*
Ga0049082_1001661363300005584Freshwater LenticYVTDKPEGGLDHAIDAARYACMMKLSVKAQRKGTYAISVGKYSNF*
Ga0049082_1026132713300005584Freshwater LenticNEMYAYQYATDKHGYITDIPEGGLDHLLDAARYVGMMKLTQKAQTKGTYAISIGNYKY*
Ga0079957_130135713300005805LakeNEMYSYQYASDKYGYVTDVPEGGLDHLIDAARYCCMMKLSQQAQNKGRYAITIGNIKY*
Ga0075464_1076525513300006805AqueousEGGLDHLIDASRYVIMSKLSLKAQQKGVYSISIR*
Ga0070748_112071713300006920AqueousQNLINEFYGYQWSTDKHGYATDTPEGGLDHLIDAVRYVGMMKLSQKAVNKGKYTINVF*
Ga0102862_119531213300007670EstuarineMYAYQYSADKYGYITDTPEGGLDHLIDAARYCCMMKLSQKATQKGKYAITIGNIRY*
Ga0114340_107450413300008107Freshwater, PlanktonVLQNHKIHVLRSSQNLINELYGYQYATDKYGYVTDTPEGGLDHLLDAARYVGMMRLTQKATKKGTYAITIR*
Ga0114350_110855013300008116Freshwater, PlanktonPEGGLDHLLDAARYVGMMRLTQKAIKKGTYAITVR*
Ga0114351_112360713300008117Freshwater, PlanktonDKHGYTTDTPEGGLDHLLDAARYVAMMKLTQKAVRKGSYAITIR*
Ga0114355_100666013300008120Freshwater, PlanktonGYVTDTPEGGLDHLLDAARYVGMMRLTQKATKKGTYAITIR*
Ga0114353_110980843300008264Freshwater, PlanktonNKSQNLINEMYSYQYATDKYGYVTDTPEGGLDHLIDAARYCCMMKLSQSAQKKGQYAISIGNYRY*
Ga0114363_110793733300008266Freshwater, PlanktonVTDNPEGGLDHLIDAARYCCMMKLSEKAKSKGKYAITIGKIKY*
Ga0114363_118342833300008266Freshwater, PlanktonPEGGLDHLLDAARYVGMMRLTQKATKKGTYAITVR*
Ga0114876_102320153300008448Freshwater LakeYAYQYSTDKHGYVTDIPEGGLDHLLDALRYVGMMKLTQKATTKGRYAITVGQHRY*
Ga0114880_115314513300008450Freshwater LakeGYITDTPEGGLDHLIDAARYCCMMKLSQKATQKGKYAITIGNIRY*
Ga0114962_1009230213300009151Freshwater LakeEMYGYQYITDKHGYTTDQPEGGLDHLIDAARYACMMRLSVKAANKGRYAITIGKHQYG*
Ga0114978_1028413813300009159Freshwater LakeGLDHLIDAARYCCMMKLSQKAQRKGVYAITIGQNRY*
Ga0105097_1039090633300009169Freshwater SedimentDKHGYTTDNPEGGLDHLIDAARYCCMMKLSEKAKSKGTYAITIGKIRY*
Ga0133913_1125606913300010885Freshwater LakeLINEMYAYQYQTDKHGYTTDVPEGGLDHLIDALRYVAMMKLSQKAVAKGKYAITIGRHQY
Ga0133913_1309500113300010885Freshwater LakePEGGLDHAIDAARYGCMMSLSQKAVNKGTYAISIGKYKY*
Ga0139557_104460213300011010FreshwaterYSYQYATDKYGYVTDNPEGGLDHLIDAARYVAMMKLTHKAQNKGQYAISIGNYRY*
(restricted) Ga0172367_1022598643300013126FreshwaterDHLIDAARYCCMMRLSQKGVNKGKYAITVGNIKY*
Ga0181364_101076753300017701Freshwater LakeILKQSQNLINEMYAYQYETDKHGYTTDRPEGGLDHAIDAARYGCMMSLSQKAVNKGTYAISIGKYKY
Ga0181350_111830013300017716Freshwater LakeKIKILKTSQNLINEMYAYQYETDKHGYTTDRPEGGLDHAIDAARYGCMMSLSQKAVNKGTYAISIGRYKY
Ga0181347_105403533300017722Freshwater LakeEGGLDHAIDAARYGCMMSLSQKAVNKGTYAITIGQHKY
Ga0181347_105997233300017722Freshwater LakeLINEMYAYQYETDKHGYTTDRPEGGLDHAIDAARYGCMMSLSQKAVNKGTYAISIGKYKY
Ga0181362_100142613300017723Freshwater LakeWATDKYGYQLDKPDGGLDHAIDAARYCAMMKLTKQNQNKGVYAISVR
Ga0181362_100297523300017723Freshwater LakeMYAYQYETDKHGYTTDRPEGGLDHAIDAARYGCMMSLSQKAVNKGTYAISIGKYKY
Ga0181362_107210013300017723Freshwater LakePEGGLDHAIDAARYGCMMSLSQKAVNKGTYAISIGRYKY
Ga0181352_102898513300017747Freshwater LakeNLINEMYAYQYATDKYGYVTDTPEGGLDHLLDAARYVAMMKLTQKATNKGKYVISIR
Ga0181352_106971433300017747Freshwater LakeNVLNKPEGGLDHLLDAARYCCMSKLIRKEENKGKYAITIGNVRL
Ga0181344_122859223300017754Freshwater LakeKPESGLDHLIDAARYCCMSKLTRKEENKGKYAITIGNVRL
Ga0181356_100463113300017761Freshwater LakeHGYTTDRPEGGLDHAIDAARYGCMMSLSQKAQRKGTYAISIGQHKY
Ga0181356_118903233300017761Freshwater LakeQWATDKYGYQLDKPDGGLDHAIDAARYCAMMKLTKQNQNKGVYAISVR
Ga0181343_118538733300017766Freshwater LakeYGYTTDNPEGGLDHLIDAARYVAMMKLSVKAQKKGTYAISIGKYANF
Ga0181358_103564313300017774Freshwater LakeQNLINEMYAYQYETDKHGYTTDRPEGGLDHAIDAARYGCMMSLSQKAVNKGTYAISIGRYKY
Ga0181358_123916413300017774Freshwater LakeIKKILRTSQNLINEMYAYQYITDKYGYVTDKPEGGLDHAIDAARYAVMMKLSVKAQRKGTYAISVGKYSNF
Ga0181358_125498513300017774Freshwater LakeQYATDKHGYTTDNPDGGLDHLLDAARYVAMMRLSIKAANKGKYAITIGNQRY
Ga0181357_121201433300017777Freshwater LakeYTTDRPEGGLDHAIDAARYGCMMSLSQKAVNKGTYAISIGRYKY
Ga0181349_103941713300017778Freshwater LakeNLINEMYAYQYITDKYGYVTDKPEGGLDHAIDAARYACMMKLSVKAQSKGKYQISIR
Ga0181349_120581213300017778Freshwater LakeDKHGYTTDRPEGGLDHAIDAARYGCMMSLSQKAVNKGTYAISIGKYKY
Ga0181349_125027433300017778Freshwater LakeLDHAIDAARYGCMMSLSQKAVNKGTYAISIGRYKY
Ga0181346_104917913300017780Freshwater LakeAYQYATDKYGYTTDNPEGGLDHLIDAARYVAMMKLSIKAQKRGTYAISIGKYANF
Ga0181346_106250413300017780Freshwater LakeLDHAIDAARYGCMMSLSQKAQRKGSYAITIGQHKY
Ga0181346_120571133300017780Freshwater LakeGLDHAIDAARYGCMMSLSQKAQRKGSYAITIGQHKF
Ga0181346_126690813300017780Freshwater LakeNPEGGLDHLIDAARYVAMMKLSVKAQKRGTYAISIGKYANF
Ga0181348_117244413300017784Freshwater LakeEHGYTTDRPEGGLDHAIDAARYGCMMSLSQKAVNKGTYAISIGKYKY
Ga0181355_108312213300017785Freshwater LakeKTSQNLINEIYGYQYAEDRGGYITDTPEGGLDHLLDAMRYVAMMKLSIKSQAKGKYQIAF
Ga0181355_115800513300017785Freshwater LakeNLINEMYSYQYATDKHGYTTDKPEGGLDHLIDAARYGCMMRLSLKHANRGKYNISII
Ga0181359_101626513300019784Freshwater LakeQSQNLINEMYAYQYETDKHGYTTDRPEGGLDHAIDAARYGCMMSLSQKAVNKGTYAISIGKYKY
Ga0181359_108861733300019784Freshwater LakeIKILKTSQNLINEMYAYQYETDKHGYTTDRPEGGLDHAIDAARYGCMMSLSQKAVNKGTYAISIGRYKY
Ga0181359_125389933300019784Freshwater LakeGLDHLLDAARYVGMMKLTQKAQTKGTYAISIGKYANF
Ga0208235_104086523300020530FreshwaterQNLINEFYSYQWAMDKHQHVTDRPEGGMDHLIDAARYGFMMKLSNKATAVGKYVIRVR
Ga0207942_104595613300020549FreshwaterDKYGYQLDKPDGGLDHAIDAARYCAMMKLTKQNQNKGVYAISVR
Ga0194133_1057489733300021091Freshwater LakeVLRTSQNLINEMYGYQYATDKYGYVTDTPENGLDHLLDAARYVGMMRLTQKASKRGTYAITIR
Ga0214163_104062533300021141FreshwaterKKSQNLINEMYAYQYATDKHGYITDTPEGGLDHLLDAARYVGMMKLTQKAQTKGTYAISIGNYKY
Ga0222714_1059176113300021961Estuarine WaterHGYITDTPEGGLDHLIDAARYCCMMKLSQKAQNKGRYAITIGNIRY
Ga0222713_1076989713300021962Estuarine WaterKPEGGLDHLIDAARYCCMSKLTKRQENKGKYSITVGNVRL
Ga0222713_1079307233300021962Estuarine WaterDRPEGGLDHLMDAVRYVGMSKLTKREENKGKYTISIR
Ga0181353_104350513300022179Freshwater LakePEGGLDHAIDAARYGCMMSLSQKAQAKGTYAISIGKYRY
Ga0181354_109766933300022190Freshwater LakeHGYTTDRPEGGLDHAIDAARYGCMMSLSQKAVNKGTYAISIGRYKY
Ga0181354_110526313300022190Freshwater LakeDKYGYTTDTPEGGLDHLIDAARYCCMMKLSQKAQNKGRYALTIGNIHY
Ga0181354_118735433300022190Freshwater LakeKIKILKTSQNLINEMYAYQYETDKHGYVTDRPEGGLDHAIDAARYGCMMSLSQKAQAKGTYAISIGKYRY
Ga0181354_121953833300022190Freshwater LakeYATDKYGYVTDTPEGGLDHLLDAARYVGMMKLTQKATKKGTYAITIR
Ga0181351_112435433300022407Freshwater LakePEGGLDHAIDAARYGCMMSLSQKAVNKGTYAISIGKYKY
Ga0181351_114393913300022407Freshwater LakeEDKGGYVTDTPEGGLDHLLDAMRYVAMMKLSIKSQAKGKYQIAFK
Ga0255167_107909833300024350FreshwaterLKKSQNLINEFYGYQYGTDKYGYVTDIPEGGLDHLIDAARYCCMMKLSQKATQKGRYAITIGNIRH
Ga0255186_101581613300024512FreshwaterDTPEGGLDHLIDAARYAAMMKLSVKAQTKGQYAISIGQYRY
Ga0255144_101597443300024513FreshwaterTPEGGLDHLIDAARYCCMMKLSQKATQKGRYAITIGNIRH
Ga0255144_105646613300024513FreshwaterNKSQNLINELYSYQYATDKYGYVTDTPEGGLDHLIDAARYCCMMKLSQKAVNKGQYSISI
Ga0208147_100871313300025635AqueousYGYQYSTDKHGYTTDVPEEGLDHLMDALRYVGLMKLTQTAQKKGTYALSVGGVRY
Ga0208795_118167613300025655AqueousLINEMYAYQYETDKYGYVTDKPEGGLDHAIDAARYGCMMSLSQKAVAKGRYSITVGNIRY
Ga0208802_105744833300027210EstuarineMYAYQYSADKYGYITDTPEGGLDHLIDAARYCCMMKLSQKATQKGKYAITIGNIRY
Ga0255154_103109413300027467FreshwaterGYVTDIPEGGLDHLIDAARYCCMMKLSQKATQKGRYAITIGNIRY
Ga0208133_1000113413300027631EstuarineQYSTDKHGYTTDVPEEGLDHLMDALRYVALMKLTQTAQKKGTYALSIGGVRY
Ga0209553_113528333300027688Freshwater LakeYAYQYETDKHGYTTDRPEGGLDHAIDAARYGCMMSLSQKAQKKGTYAISIGQHKY
Ga0209033_111349313300027697Freshwater LakeGYQYATDKYGYVTDTPEGGLDHLLDAARYVAMMKLTQKATKKGTYAITIR
Ga0209084_126125933300027749Freshwater LakeGYTTDQPEGGLDHLIDAARYACMMRLSVKAANKGRYAITIGKHQYG
Ga0209768_1033805913300027772Freshwater LakeSQNLINEIYGYQYAEDRGGYITDTPEGGLDHLLDAMRYVAMMKLSIKSQAKGNYAITVR
Ga0209246_1000361613300027785Freshwater LakeYQYITDKYGYVTDKPEGGLDHAIDAARYACMMKLSVKAQSKGKYQISIR
Ga0209246_1003675413300027785Freshwater LakeYQYITDKYGYVTDKPEGGLDHAIDAARYACMMKLSVKAQKKGTYAISVGKYSNF
Ga0209353_1030738333300027798Freshwater LakeSSQNLINEMYAYQYITDKYGYVTDRPEGGLDHLIDAARYACMMKLSVKAQAKGKYAISIGNYKY
Ga0209353_1032454033300027798Freshwater LakeAYQYATDKHGYTTDNPDGGLDHLLDAARYVAMMRLSIKAANKGKYAITIGNQRY
Ga0209353_1034660413300027798Freshwater LakeTTDRPEGGLDHAIDAARYGCMMSLSQKAVNKGTYAISIGRYKY
Ga0209354_1005782013300027808Freshwater LakeKILKSSQNLINEMYAYQYITDKYGYVTDRPEGGLDHLIDAARYACMMKLSVKAQAKGKYAISIGNYKY
Ga0209354_1016476313300027808Freshwater LakeTTDRPEGGLDHAIDAARYGCMMSLSQKAVNKGTYAISIGKYKY
Ga0255174_105939833300028275FreshwaterINELYSYQYATDKYGYVTDTPEGGLDHLIDAARYCCMMKLSQKAVNKGQYSISIR
Ga0315291_1048140413300031707SedimentETDKHGYTTDRPEGGLDHAIDAARYGCMMSLSQKAQKKGTYAISIGQHKY
Ga0315907_1034326113300031758FreshwaterQYATDKHGYTTDTPEGGLDHLLDAARYVAMMKLTQKAVRKGSYAITIR
Ga0315288_1043321913300031772SedimentYQYETDKHGYTTDRPEGGLDHAIDAARYGCMMSLSQKAVNKGTYAISIGKYKY
Ga0315899_1163912233300031784FreshwaterEGGLDHLIDAARYCCMMKLSQSAQKKGQYAISIGNYRY
Ga0315899_1176377633300031784FreshwaterHVHKKSQNLINEMYAYQYATDKHGYITDTPEGGLDHLLDAARYVAMMKLTQKATNKGKYVISIR
Ga0315900_1068049833300031787FreshwaterHVLRSSQNLINEFYGYQYAADKYGYVTDTPEGGLDHLLDAARYVGMMRLTQKATKRGTYAITIR
Ga0315900_1069581833300031787FreshwaterNEMYAYQYSQDKHGYVTDVPEGGLDHLIDAARYCCMMKLSQKATARGTYSITVGGVRI
Ga0315290_1068718133300031834SedimentKILRTSQNLINEMYAYQYITDKYGYVTDKPEGGLDHAIDAARYACMMKLSVKAQRKGTYAISVGKYSNF
Ga0315290_1071839533300031834SedimentYATDKHGYTTDKPEGGLDHLIDAARYGCMMRLSLKHANRGKYNISII
Ga0315904_1104340233300031951FreshwaterYGYVTDTPEGGLDHLLDAARYVAMMKLTQKAQTKGKYVISFR
Ga0315294_1111234033300031952SedimentDKPEGGLDHAIDAARYACMMKLSVKAQRKGTYAISVGKYSNF
Ga0315901_1117430533300031963FreshwaterDKHGYITDTPEGGLDHLLDAARYVAMMKLTQKATNKGKYVITIR
Ga0315274_1116050933300031999SedimentEMYAYQYSTDKYGYTTDNPEGGLDHLIDAARYVAMMKLSVKAQKKGTYAISIGKYANF
Ga0315274_1122303013300031999SedimentGGLDHLIDAARYCCMMKLSQKAQRKGTYAITIGQYKY
Ga0315274_1141856533300031999SedimentKYGYTTDTPEGGLDHLIDAARYVAMMRLTRKNEKRGQYAISIR
Ga0315289_1155601733300032046SedimentTDKYGYVTDRPEGGLDHLIDAARYGCMMKLSVKAQAKGKYAISIGNYKY
Ga0315906_1086502833300032050FreshwaterPEGGLDHLIDAARYCCMMRLSQKAVNKGNYVISIR
Ga0315906_1123146333300032050FreshwaterITDTPEGGLDHLIDAARYCCMMKLSQKATQKGKYAITIGNIRY
Ga0315284_1239000513300032053SedimentTDKHGYVTDRPEGGLDHAIDAARYGCMMSLSQKAQSKGTYAISIGKYKY
Ga0315902_1021304263300032093FreshwaterYAYQYSQDKHGYVTDVPEGGLDHLIDAARYCCMMKLSQKATARGTYSITVGGVRI
Ga0315902_1063748813300032093FreshwaterSYQYAQDKYGYVTDVPEGGLDHLIDAARYCCMMKLSQQAQNKGKYAITIGNIKY
Ga0315277_1111779433300032118SedimentITDKYGYVTDKPEGGLDHAIDAARYACMMKLSVKAQSKGRYQISIR
Ga0315268_1241660613300032173SedimentETDKHGYTTDRPEGGLDHAIDAARYGCMMSLSQKAQKKGTYAITIGQHKY
Ga0334994_0326723_2_1573300033993FreshwaterYSTDKHGYTTDIPEGGMEHLLDAARYVALMKLTQKAAKKGSYAISFGNYKY
Ga0334979_0347171_2_1783300033996FreshwaterQNLINEFYGYQWSVDKHGYATDSPEGGLDHLIDAVRYVGMMKLSQKAVNKGKYTINVF
Ga0334987_0110627_1945_20913300034061FreshwaterDKHGYTTDNPEGGLDHLIDAARYCCMMKLSEKAKSKGKYAITIGKIKY
Ga0334995_0511790_2_1273300034062FreshwaterDTPEGGLDHLIDAARYCCMMKLSEKAKAKGKYAITIGNYKY
Ga0335019_0015149_5169_53063300034066FreshwaterGYVTDRPEGGLDHAIDAARYGCMMSLSQKAQSKGTYAITIGKYKY
Ga0335029_0534864_11_1693300034102FreshwaterMYGYQYSTDKHGYTTDTPEGGLDHLLDAARYVGMMKLTQKAVRKGSYAITIR
Ga0335029_0680754_360_5603300034102FreshwaterTINIPKTCNNLVNEFYSYQWGVDKHSQVTDKPEGGLDHLIDAARYGCMMRLSNVATAKGKYIISIR
Ga0335031_0696857_378_5483300034104FreshwaterMYAYQYETDKHGYVTDRPEGGLDHAIDAARYGCMMSLSQKAQQKGTYAITIGKYRY
Ga0335035_0416210_4_1623300034105FreshwaterMYAYQYVTDKYGYVTDTPEGGMDHLLDAARYVAMMKLTQKATNKGKYVISIR
Ga0335036_0033338_51_2213300034106FreshwaterMYGYQYSTDKHGYTTDNPEGGLDHLIDAARYCCMMKLSEKAKAKGKYAITIGNYKY
Ga0335036_0268112_3_1223300034106FreshwaterPEGGLDHAIDAARYGCMMSLSQKAQAKGTYAITIGNLRY
Ga0335036_0594046_499_6723300034106FreshwaterYAYQYATDKHGYTTDNPEGGLDHLLDAARYVAMMKLSVKAQSKGTYAIQIGKYSNIR
Ga0335066_0562731_483_5933300034112FreshwaterTPEGGMDHLLDAARYVAMMKLTQKAQTKGKYVISIR
Ga0335056_0094464_1643_18133300034120FreshwaterMYAYQYETDKHGYVTDRPEGGLDHAIDAARYGCMMSLSQKAQSKGTYAITIGKYKY
Ga0335056_0301842_744_8873300034120FreshwaterKHGYVTDRPEGGLDHAIDAARYGCMMSLSQKAQKKGTYAISIGQYKY
Ga0335056_0361452_70_2283300034120FreshwaterMYAYQYVTDKYGYVTDTPEGGMDHLLDAARYVAMMKLTQKAQTKGKYVISIR
Ga0335007_0364468_789_9173300034283FreshwaterHGYTTDTPEGGLDHLLDAARYVGMMKLTQKAVRKGSYAITIR
Ga0335048_0130289_1_1353300034356FreshwaterDKYGYVTDTPEGGMDHLLDAARYVAMMKLTQKAQTKGKYVISFR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.