NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F052444

Metagenome / Metatranscriptome Family F052444

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F052444
Family Type Metagenome / Metatranscriptome
Number of Sequences 142
Average Sequence Length 71 residues
Representative Sequence MTRTFAGRRDGRREVAGLISEIQQLTTERRRLVARGADGMELEANERSLDELRWLLADAARRSAVEPATAA
Number of Associated Samples 101
Number of Associated Scaffolds 142

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 74.65 %
% of genes near scaffold ends (potentially truncated) 30.99 %
% of genes from short scaffolds (< 2000 bps) 91.55 %
Associated GOLD sequencing projects 90
AlphaFold2 3D model prediction Yes
3D model pTM-score0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (50.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(15.493 % of family members)
Environment Ontology (ENVO) Unclassified
(32.394 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(45.070 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 58.59%    β-sheet: 0.00%    Coil/Unstructured: 41.41%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 142 Family Scaffolds
PF00456Transketolase_N 11.27
PF08279HTH_11 2.82
PF13280WYL 2.11
PF04977DivIC 0.70
PF01965DJ-1_PfpI 0.70
PF00005ABC_tran 0.70

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 142 Family Scaffolds
COG0021TransketolaseCarbohydrate transport and metabolism [G] 11.27
COG3959Transketolase, N-terminal subunitCarbohydrate transport and metabolism [G] 11.27
COG2919Cell division protein FtsBCell cycle control, cell division, chromosome partitioning [D] 0.70
COG4839Cell division protein FtsLCell cycle control, cell division, chromosome partitioning [D] 0.70

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms50.00 %
UnclassifiedrootN/A50.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_103727455Not Available855Open in IMG/M
3300000956|JGI10216J12902_112143614All Organisms → cellular organisms → Bacteria1137Open in IMG/M
3300003987|Ga0055471_10056677All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae1074Open in IMG/M
3300003990|Ga0055455_10021736All Organisms → cellular organisms → Bacteria1581Open in IMG/M
3300003993|Ga0055468_10050512All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b1055Open in IMG/M
3300003993|Ga0055468_10073098Not Available920Open in IMG/M
3300003996|Ga0055467_10029970All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1296Open in IMG/M
3300003997|Ga0055466_10126758Not Available715Open in IMG/M
3300003998|Ga0055472_10027756All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1298Open in IMG/M
3300003998|Ga0055472_10309834Not Available508Open in IMG/M
3300004114|Ga0062593_100221739All Organisms → cellular organisms → Bacteria1531Open in IMG/M
3300004114|Ga0062593_100735650All Organisms → cellular organisms → Bacteria969Open in IMG/M
3300004145|Ga0055489_10018105All Organisms → cellular organisms → Bacteria1654Open in IMG/M
3300004156|Ga0062589_100653437Not Available924Open in IMG/M
3300004156|Ga0062589_102045655Not Available582Open in IMG/M
3300004156|Ga0062589_102539890Not Available531Open in IMG/M
3300004157|Ga0062590_100505218All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b1032Open in IMG/M
3300004463|Ga0063356_102144550Not Available849Open in IMG/M
3300004463|Ga0063356_104407574All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae605Open in IMG/M
3300004479|Ga0062595_100168223Not Available1306Open in IMG/M
3300004480|Ga0062592_100686063Not Available888Open in IMG/M
3300004480|Ga0062592_101909041Not Available584Open in IMG/M
3300005329|Ga0070683_100016579All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales6502Open in IMG/M
3300005329|Ga0070683_100957054Not Available822Open in IMG/M
3300005332|Ga0066388_100747054All Organisms → cellular organisms → Bacteria1579Open in IMG/M
3300005332|Ga0066388_101707455All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b1114Open in IMG/M
3300005334|Ga0068869_101625165All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300005334|Ga0068869_101840931Not Available542Open in IMG/M
3300005338|Ga0068868_102266992Not Available518Open in IMG/M
3300005339|Ga0070660_100330695All Organisms → cellular organisms → Bacteria1253Open in IMG/M
3300005356|Ga0070674_100337829All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1212Open in IMG/M
3300005356|Ga0070674_102235578Not Available500Open in IMG/M
3300005366|Ga0070659_101062079All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300005441|Ga0070700_100153599All Organisms → cellular organisms → Bacteria1577Open in IMG/M
3300005441|Ga0070700_100985837Not Available692Open in IMG/M
3300005441|Ga0070700_100995058All Organisms → cellular organisms → Bacteria → Proteobacteria689Open in IMG/M
3300005444|Ga0070694_101551469Not Available561Open in IMG/M
3300005459|Ga0068867_102161600Not Available528Open in IMG/M
3300005577|Ga0068857_100687281Not Available972Open in IMG/M
3300005615|Ga0070702_100836007Not Available715Open in IMG/M
3300005874|Ga0075288_1086502Not Available515Open in IMG/M
3300005884|Ga0075291_1033245Not Available656Open in IMG/M
3300005937|Ga0081455_10072432All Organisms → cellular organisms → Bacteria2852Open in IMG/M
3300005937|Ga0081455_10572975All Organisms → cellular organisms → Bacteria → Proteobacteria742Open in IMG/M
3300005937|Ga0081455_10637921All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300006038|Ga0075365_10019685All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales4172Open in IMG/M
3300006038|Ga0075365_10573851All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae798Open in IMG/M
3300006844|Ga0075428_101015144All Organisms → cellular organisms → Bacteria → Proteobacteria878Open in IMG/M
3300006844|Ga0075428_102760281Not Available500Open in IMG/M
3300006876|Ga0079217_10795752All Organisms → cellular organisms → Bacteria655Open in IMG/M
3300006969|Ga0075419_10928607Not Available629Open in IMG/M
3300009094|Ga0111539_10624125All Organisms → cellular organisms → Bacteria1255Open in IMG/M
3300009148|Ga0105243_11200846Not Available772Open in IMG/M
3300009156|Ga0111538_11178395Not Available968Open in IMG/M
3300009545|Ga0105237_11167903Not Available776Open in IMG/M
3300009553|Ga0105249_10239163All Organisms → cellular organisms → Bacteria1794Open in IMG/M
3300009553|Ga0105249_10558359All Organisms → cellular organisms → Bacteria1196Open in IMG/M
3300010362|Ga0126377_12230300Not Available624Open in IMG/M
3300010371|Ga0134125_10612744All Organisms → cellular organisms → Bacteria1203Open in IMG/M
3300010399|Ga0134127_12830632Not Available565Open in IMG/M
3300012897|Ga0157285_10007893All Organisms → cellular organisms → Bacteria2009Open in IMG/M
3300012916|Ga0157310_10313752Not Available620Open in IMG/M
3300012943|Ga0164241_10071269All Organisms → cellular organisms → Bacteria2515Open in IMG/M
3300012943|Ga0164241_10440809Not Available935Open in IMG/M
3300012943|Ga0164241_10611191Not Available789Open in IMG/M
3300012958|Ga0164299_11282537All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300013100|Ga0157373_10873471Not Available666Open in IMG/M
3300014263|Ga0075324_1033221All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales957Open in IMG/M
3300014265|Ga0075314_1026862All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b1053Open in IMG/M
3300014265|Ga0075314_1183200Not Available503Open in IMG/M
3300014267|Ga0075313_1020629All Organisms → cellular organisms → Bacteria1495Open in IMG/M
3300014270|Ga0075325_1010002All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1634Open in IMG/M
3300014271|Ga0075326_1006709All Organisms → cellular organisms → Bacteria2646Open in IMG/M
3300014325|Ga0163163_12397236All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300014326|Ga0157380_10578524All Organisms → cellular organisms → Bacteria → Proteobacteria1107Open in IMG/M
3300015371|Ga0132258_10013227All Organisms → cellular organisms → Bacteria17458Open in IMG/M
3300015372|Ga0132256_101466332Not Available793Open in IMG/M
3300015374|Ga0132255_101564992All Organisms → cellular organisms → Bacteria998Open in IMG/M
3300015374|Ga0132255_102355767Not Available812Open in IMG/M
3300015374|Ga0132255_103599665Not Available659Open in IMG/M
3300017965|Ga0190266_10016570All Organisms → cellular organisms → Bacteria2052Open in IMG/M
3300017965|Ga0190266_10649486All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae649Open in IMG/M
3300018466|Ga0190268_10103894All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1329Open in IMG/M
3300018469|Ga0190270_10791027All Organisms → cellular organisms → Bacteria954Open in IMG/M
3300018469|Ga0190270_11479029Not Available728Open in IMG/M
3300018469|Ga0190270_12914356Not Available541Open in IMG/M
3300018476|Ga0190274_10385705All Organisms → cellular organisms → Bacteria → Proteobacteria1351Open in IMG/M
3300018476|Ga0190274_12470615Not Available617Open in IMG/M
3300018481|Ga0190271_11572326Not Available773Open in IMG/M
3300018481|Ga0190271_12868585Not Available579Open in IMG/M
3300019356|Ga0173481_10185835All Organisms → cellular organisms → Bacteria → Proteobacteria889Open in IMG/M
3300019356|Ga0173481_10269024All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → environmental samples → uncultured Actinomycetospora sp.777Open in IMG/M
3300019356|Ga0173481_10823791Not Available515Open in IMG/M
3300019361|Ga0173482_10353320Not Available667Open in IMG/M
3300019767|Ga0190267_10952879Not Available595Open in IMG/M
3300020069|Ga0197907_11124285Not Available633Open in IMG/M
3300022883|Ga0247786_1044779All Organisms → cellular organisms → Bacteria888Open in IMG/M
3300022883|Ga0247786_1088806Not Available660Open in IMG/M
3300022893|Ga0247787_1068230Not Available541Open in IMG/M
3300023266|Ga0247789_1008870All Organisms → cellular organisms → Bacteria1558Open in IMG/M
3300025321|Ga0207656_10503952Not Available615Open in IMG/M
3300025537|Ga0210061_1067687Not Available617Open in IMG/M
3300025552|Ga0210142_1000036All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria32580Open in IMG/M
3300025559|Ga0210087_1037178All Organisms → cellular organisms → Bacteria981Open in IMG/M
3300025567|Ga0210076_1024469All Organisms → cellular organisms → Bacteria1290Open in IMG/M
3300025791|Ga0210115_1037595All Organisms → cellular organisms → Bacteria1055Open in IMG/M
3300025796|Ga0210113_1033236All Organisms → cellular organisms → Bacteria → Proteobacteria1050Open in IMG/M
3300025899|Ga0207642_10222073Not Available1056Open in IMG/M
3300025908|Ga0207643_10438903Not Available829Open in IMG/M
3300025920|Ga0207649_10459760All Organisms → cellular organisms → Bacteria962Open in IMG/M
3300025923|Ga0207681_11524430Not Available560Open in IMG/M
3300025941|Ga0207711_11424514Not Available635Open in IMG/M
3300025959|Ga0210116_1039380All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae898Open in IMG/M
3300026075|Ga0207708_11213135Not Available660Open in IMG/M
3300026075|Ga0207708_11700046Not Available554Open in IMG/M
3300026089|Ga0207648_10361872All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1309Open in IMG/M
3300026090|Ga0208912_1031884Not Available765Open in IMG/M
3300027866|Ga0209813_10487736Not Available509Open in IMG/M
3300027907|Ga0207428_10442518All Organisms → cellular organisms → Bacteria948Open in IMG/M
3300027907|Ga0207428_11302001Not Available503Open in IMG/M
3300028587|Ga0247828_10049499All Organisms → cellular organisms → Bacteria1813Open in IMG/M
3300028589|Ga0247818_10207586All Organisms → cellular organisms → Bacteria1288Open in IMG/M
3300028589|Ga0247818_10697853Not Available703Open in IMG/M
3300028592|Ga0247822_10636835Not Available857Open in IMG/M
3300028592|Ga0247822_11336028Not Available602Open in IMG/M
3300028596|Ga0247821_10776954Not Available630Open in IMG/M
3300028812|Ga0247825_10740524Not Available708Open in IMG/M
3300028812|Ga0247825_11022473Not Available601Open in IMG/M
3300028812|Ga0247825_11454093Not Available503Open in IMG/M
3300030336|Ga0247826_10000965All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales7325Open in IMG/M
3300030336|Ga0247826_10047521All Organisms → cellular organisms → Bacteria → Proteobacteria2365Open in IMG/M
3300030336|Ga0247826_10072550All Organisms → cellular organisms → Bacteria2031Open in IMG/M
3300030336|Ga0247826_10089089All Organisms → cellular organisms → Bacteria1881Open in IMG/M
3300031547|Ga0310887_10814769Not Available587Open in IMG/M
3300031562|Ga0310886_10615121All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae668Open in IMG/M
3300031652|Ga0315553_10308950Not Available655Open in IMG/M
3300031940|Ga0310901_10360602All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300032003|Ga0310897_10524777Not Available577Open in IMG/M
3300032075|Ga0310890_10936655Not Available693Open in IMG/M
3300032122|Ga0310895_10381288Not Available686Open in IMG/M
3300033475|Ga0310811_11123450All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300033551|Ga0247830_10565157All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae898Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil15.49%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil14.08%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands11.27%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil6.34%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands4.93%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.93%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.82%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.82%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere2.11%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere2.11%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.11%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.11%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.41%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.41%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.41%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.41%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.41%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.41%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.41%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.41%
Salt Marsh SedimentEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment0.70%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.70%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.70%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.70%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.70%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.70%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.70%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.70%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.70%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.70%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.70%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300003987Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2EnvironmentalOpen in IMG/M
3300003990Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2EnvironmentalOpen in IMG/M
3300003993Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2EnvironmentalOpen in IMG/M
3300003996Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2EnvironmentalOpen in IMG/M
3300003997Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1EnvironmentalOpen in IMG/M
3300003998Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004145Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005874Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404EnvironmentalOpen in IMG/M
3300005884Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012916Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2EnvironmentalOpen in IMG/M
3300012943Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300014263Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1EnvironmentalOpen in IMG/M
3300014265Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2EnvironmentalOpen in IMG/M
3300014267Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1EnvironmentalOpen in IMG/M
3300014270Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1EnvironmentalOpen in IMG/M
3300014271Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300019767Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 TEnvironmentalOpen in IMG/M
3300020069Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022883Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4EnvironmentalOpen in IMG/M
3300022893Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S126-311R-4EnvironmentalOpen in IMG/M
3300023266Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4EnvironmentalOpen in IMG/M
3300025321Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025537Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025552Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025559Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025567Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025791Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025796Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025959Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026090Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300027866Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028596Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031652Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-40EnvironmentalOpen in IMG/M
3300031940Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_10372745523300000956SoilRRDGRREVAGLISEIQQLTTERRRLVARGAEGVELEANERSLDELRWLLAEAARRSAVEPVTAA*
JGI10216J12902_11214361423300000956SoilMTGTSAGRRDGRREVAELIREIQQLTTERRRLEAKSARNGELVANEREIDELRWLLADAARRAANDEPVRAA*
Ga0055471_1005667723300003987Natural And Restored WetlandsMTRSFAARRDVRREVAELIREIQQLTSERRRLEARSAGGGELDANEREIDELRWLLAEAARLEASDEPVRAA*
Ga0055455_1002173613300003990Natural And Restored WetlandsMTRTFAQRRDGRREVAGLISEIQQLTTERRRLVARGAEGFELEANERTLDELRWLLAEAARRSAVEPVTAA*
Ga0055468_1005051213300003993Natural And Restored WetlandsSFAGRGDVRREVAELIREIQQLTSERRRLEARSAGGGELVANEREIDELRWLLAEAARLEASDEPVRAA*
Ga0055468_1007309823300003993Natural And Restored WetlandsMTRTVTQRRDLRREVAGLIREIQQLTRERRRLMALGAELIELEANERAIDELRWLLADAARRTAPEPANAA*
Ga0055467_1002997023300003996Natural And Restored WetlandsMTRTFAGRRDGRREVAALVSEIQQLTSERRRLQARGDVSMELEANERALDELRWLLADAARRSAVEPATAA*
Ga0055466_1012675823300003997Natural And Restored WetlandsMTRSFAGRGDVRREVAELIREIQQLTSERRRLEARSAGGGELDANEREIDELRWLLAEAARLEASDEPVRAA*
Ga0055472_1002775623300003998Natural And Restored WetlandsMTRSFAGRGDVRREVAELIREIQQLTSERRRLEARSAGGGELVANEREIDELRWLLAEAARLEASDEPVRAA*
Ga0055472_1030983413300003998Natural And Restored WetlandsMTRSFAGRRDTRREVAELIREIQQLTAERRRLEARGAGGGERDENEREIDELRWLLAEAARHEASEEPVQAA*
Ga0062593_10022173923300004114SoilMTSTFAQRGDGRREVAGLISEIQQLTTERRRLVARGAGGVELEANERSLDELRWLLAEAARRSALEPATAA*
Ga0062593_10073565013300004114SoilMTRTFAQRRDGRREVAGLISEIQQLTTERRRLVARGAEGFELEANERTLDELRWLLAEAARRSAVEPVSAA*
Ga0055489_1001810523300004145Natural And Restored WetlandsMSRSLAGRREVAGLIREIQQLTAERRRLEARSAAAGELDDNEREIDELRWLLAEAARRDASDEPVPAA*
Ga0062589_10065343723300004156SoilMTSTFAQRRDGRREVAGLISEIQQLTTERRRLVARGAGGVELEANERSLDELRWLLAEAARRSALEPATAA*
Ga0062589_10204565523300004156SoilMLRGVSRKRRRRSTMSRTFAGRRDGRREVAGLISEIQQLTTERRRLVARGAEGVELEANERSLDELRWLLAEAARRSAVEPVTAA*
Ga0062589_10253989013300004156SoilFAQRRDGRREVAGLIREIQQLTTERRRLVAGGAEGVELEANERSLDELRWLLAEAARRSAVEPASAA*
Ga0062590_10050521823300004157SoilMTGTFVGRQDGRREVADLIREIQQLTAERRRLEARRAGGDELGTNEREIDELRWLLAEAARRAATDEPVRAA*
Ga0063356_10214455023300004463Arabidopsis Thaliana RhizosphereMSRTFAQRRDGRREVAGLISEIQQLTTERRRLVARGAEGVELEANERSLDELRWLLAEAARRSAVEPMTAA*
Ga0063356_10440757413300004463Arabidopsis Thaliana RhizosphereMTRTLAGRGEERHEVADLIREIQQLTAERRRLAARSADGLELDANEREIDELRWLLADAARRAASDGPARAA*
Ga0062595_10016822313300004479SoilMSRTFAGRRDGRREVAGLISEIQQLTTERRRLVARGAEGVELEANERSLDELRWLLAEAARRSAVEPVTAA*
Ga0062592_10068606313300004480SoilRTFAQRRDGRREVAGLIREIQQLTTERRRLVAGGAEGVELEANERSLDELRWLLAEAARRSAVEPASAA*
Ga0062592_10190904123300004480SoilMTRTFAGRMDGRHEVADLIREIQQLTAERRRLAERSADGIELDANEREIDELRWLLADAARRAASNEPVRAA*
Ga0070683_10001657953300005329Corn RhizosphereMTRTFAGRRDGRREVAGLISEIQQLTSERRRLVARGADGMELEANERSLDELRWLLADAARRSAVEPATAA*
Ga0070683_10095705413300005329Corn RhizosphereMTRTFAQRRDGRREVAGLIREIQQLTTERRRLVASGAEGVDLEANERSLDELRWLLAEAARRSAVEPASAA*
Ga0066388_10074705423300005332Tropical Forest SoilMLVDVSRKRRRGSRMTRTFAQRRDGRREVAGLVSEIQQLTSERRRLVARGADGVELEANERSLDELRWLLADAARRSAVEPASAA*
Ga0066388_10170745513300005332Tropical Forest SoilMTSTFAQRRDGRREVAGLIREIQQLTTERRRLLARDADGVELEANERTLDELRWLLADAARRSAVEPATAA*
Ga0068869_10162516513300005334Miscanthus RhizosphereRKKGMTRTFAQRRDGRREVAALVSEIQQLTSERRRLQARGDVGMELEANERALDELRWLLAEAARRSAVEPATAA*
Ga0068869_10184093113300005334Miscanthus RhizosphereMTRTFAGRRDGRREVAGLISEIQQLTTERRRLVARGADGMELEANERSLDELRWLLADAARRSAVEPATAA*
Ga0068868_10226699223300005338Miscanthus RhizosphereRDGRREVAGLISEIQQLTTERRRLVARGAGGVELEANERSLDELRWLLAEAARRSALEPATAA*
Ga0070660_10033069513300005339Corn RhizosphereKGMTRTFAQRRDGRREVAALVSEIQQLTSERRRLQARGDVGMELEANERALDELRWLLAEAARRSAVEPATAA*
Ga0070674_10033782923300005356Miscanthus RhizosphereMTRTLAGPSEERHEVADLIREIQQLTAERRRLAARSADGLELDANEREIDELRWLLADAARRAASDGPARAA*
Ga0070674_10223557813300005356Miscanthus RhizosphereDASTGRIRMTRTFAGRSDGRHEVADLIREIQQLTAERRRLAARSADGIELDTNEREIDELRWLLADAARRAASDEPVRAA*
Ga0070659_10106207913300005366Corn RhizosphereMTRTFAQRRDGRREVAGLIREIQQLTTERRRLVAGGAEGVELEANERSLGELRWLLAEAARRSAVEPVSAA*
Ga0070700_10015359913300005441Corn, Switchgrass And Miscanthus RhizosphereMTRTFAQRRDGRREVAALVSEIQQLTSERRRLQARGDVGMELEANERALDELRWLLAEAARRSAVEPATAA*
Ga0070700_10098583713300005441Corn, Switchgrass And Miscanthus RhizosphereGMTSTFAQRRDGRREVAGLISEIQQLTTERRRLVARGAGGVELEANERSLDELRWLLAEAARRSALEPATAA*
Ga0070700_10099505813300005441Corn, Switchgrass And Miscanthus RhizosphereMTRTFAGRQDGRREVADLIREIQQLTAERRRLEARRADGRELDANEREIDELRWLLAEAARRAATDEPVYAA*
Ga0070694_10155146913300005444Corn, Switchgrass And Miscanthus RhizosphereMSRTFAGRRDGRREVAGLISEIQQLTTERRRLVARGAEGVELEANERSLDELRWLLAEAARRSALEPATAA*
Ga0068867_10216160023300005459Miscanthus RhizosphereMTRTFAQRRDGRREVAGLIREIQQLTTERRRLVAGGAEGVELEANERSLDELRWLLAEAARRSAVEPVSAA*
Ga0068857_10068728133300005577Corn RhizosphereMTRTFAQRRDGRREVAGLIREIQQLTTERRRLVAGGAEGVELEANERSLDELRWLLAEAARRSAVEPA
Ga0070702_10083600713300005615Corn, Switchgrass And Miscanthus RhizosphereMTRTFAGRSDGRHEVADLIREIQQLTAERRRLAARSADGIELDTNEREIDELRWLLADAARRAASDGPARAA*
Ga0075288_108650223300005874Rice Paddy SoilMTRTFAGRRDGRREVAALISEIQQLTGERRRLQARGGGSMELEANERALDELRWLLADAARRSAVEPATAA*
Ga0075291_103324523300005884Rice Paddy SoilMTRTFAQRRDGRREVAALISEIQQLTSARRRLQAHGGASMELEANERAIDELRWLLAEAARRSAPQPANAA*
Ga0081455_1007243223300005937Tabebuia Heterophylla RhizosphereMKRTSANRRDGRREVAGLIREIQQLTTERRRLVAGGADGFELEANERTLDELRWLLAEAARRSAVEPASAA*
Ga0081455_1057297523300005937Tabebuia Heterophylla RhizosphereMRTFSQRIDGRREVAGLVREIQQLTTERRRLVARGAEGVELEANERALDELRWLLADAARRSAVEPATAA*
Ga0081455_1063792123300005937Tabebuia Heterophylla RhizosphereMTRTFAQRRDGRREVAALVSEIQQLTSERRRLQARGDVSIELEANERALDELRWLLAEAARRSAVEPATAA*
Ga0075365_1001968563300006038Populus EndosphereMTRTFAQRRDGRREVAGLIREIQQLTTERRRLVAGGAEGVELEANERSLDELRWLLAEAARRSAVEPASAA*
Ga0075365_1057385113300006038Populus EndosphereMTGTFVGRQDGRREVADLIREIQQLTAERRRLEARRAGGDELGTNEREIDELRWLLAEAARR
Ga0075428_10101514423300006844Populus RhizosphereMTGTFVGRQDGRCEVADLIREIQQLTAERRRLEARRAGGDELGTNEREIDELRWLLAEAARRAATDEPVRAA*
Ga0075428_10276028113300006844Populus RhizosphereMTRTFAQRRDGRREVAGLIREIQQLTTERRRLVASGAEGVELEANERTLDELRWLLAEAARRSAVEPASAA*
Ga0079217_1079575213300006876Agricultural SoilMTGTFAGRRDGRREVAELIREIQQLTTERRRLEAKSARNGELVANEREIDELRWLLADAARRAANDEPVRAA*
Ga0075419_1092860723300006969Populus RhizosphereTFAQRRDGRREVAGRIREIQQLTTERRRLVASGAEGVELEANERSLDELRWLLAEAARRSAVEPASAA*
Ga0111539_1062412523300009094Populus RhizosphereMTRTFAQRRDGRREVAGLIREIQQLTTERRRLVASGAEGVELEANERSLDELRWLLAEAARRSAVEPASAA*
Ga0105243_1120084623300009148Miscanthus RhizosphereHEVADLIREIQQLTAERRRLAARSADGLELDANEREIDELRWLLADAARRAASDGPARAA
Ga0111538_1117839513300009156Populus RhizosphereMTRTFAQRRDGRREVAGLIREIQQLTTERRRLVAGGAEGVELEANEHTLDELRWLLAEAARRSAVEPASVA*
Ga0105237_1116790313300009545Corn RhizosphereGRREVAGLISEIQQLTTERRRLVARGAGGVELEANERSLDELRWLLAEAARRSALEPATAA*
Ga0105249_1023916313300009553Switchgrass RhizosphereMTRTFAQRRDGRREVAALVSEIQQLTSERRRLQARGDVGMELEANERSLDELRWLLAEAA
Ga0105249_1055835923300009553Switchgrass RhizosphereMSRTFAGRRDRRREVAGLISEIQQLTTERRRLVARGAEGVELEANERSLDELRWLLAEAARRSAVEPVTAA*
Ga0126377_1223030013300010362Tropical Forest SoilMTSTFAQRRDGRHEVAGLIREIQQLTTERRRLLARGAEGVELEANERTLDELRWLLADAARRSAVEPATAA*
Ga0134125_1061274413300010371Terrestrial SoilMTSTFAQRGDGRREGAGLISEIQQLTTERRRLVARGAGGVELEANERSLDELRWLLAEAARRSALEPATAA*
Ga0134127_1283063213300010399Terrestrial SoilMTRTFAQRRDGRREVAGLIREIQQLTTERRRLVASGAEGVELEANERSLDELRWLLAEAARRSAVEPVSAA*
Ga0157285_1000789323300012897SoilMTRTFAQRRDGRREVAGLIREIQQLTTERRRLVASGAEGVELEANERSLDELRWLLAEAARRSAVEPASVA*
Ga0157310_1031375213300012916SoilPTGAIRRIDRSVARHAVGVPSKRRRRKGMTRTFAQRRDGRREVAALVSEIQQLTSERRRLQARGDVGMELEANERALDELRWLLAEAARRSAVEPATAA*
Ga0164241_1007126923300012943SoilMTRTFAGRRDGRRELAGLISEIQQLTTERRRLVARGAEGMELEANERSLDELRWLLAEAARRSAVEPATAA*
Ga0164241_1044080913300012943SoilMFAQRRDGRREVAALVSEIQQLTSERRRLQSRGDVSMELEANERALDELRWLLADAARRSAVEPATAA*
Ga0164241_1061119123300012943SoilVSRKKRRRSGMTRTFAHRRDGRREVAGLISEIQQLTSERRRLVSGGADGMELEANERSLDELRWLLADAARRSAVEPATAA*
Ga0164299_1128253713300012958SoilMLRGVSRKRRRRSTMSRTFAGRRDGRREVAGLISEIQQLTTERRRLVARGAEGVELEANERSLDELSWLLAEAARRSAVEP
Ga0157373_1087347113300013100Corn RhizosphereMTRTFAGRRAGRREVAGLISEIQQLTTERRRLVARGAGGVELEANERSLDELRWLLAEAARRSALEPATAA*
Ga0075324_103322123300014263Natural And Restored WetlandsMTRSFAGREDGRREVAELIREIQQLTSERRRLEASRAGGGELDANEREIDELRWLLAEAARLEASDEPVRAA*
Ga0075314_102686213300014265Natural And Restored WetlandsMTRSFAGPRDGQREVAELIGEIQQLTSERRRLEARSAGGGELDANEREIDELRWLLAEAARLEASDEPVRAA*
Ga0075314_118320013300014265Natural And Restored WetlandsEVAGLIREIQQLTRERRRLMALGAELIELEANERAIDELRWLLADAARRTAPEPANAA*
Ga0075313_102062913300014267Natural And Restored WetlandsAARRDVRREVAELIREIQQLTSERRRLEARSAGGGEFDANEREIDELRWLLAEAARLEASDEPVRAA*
Ga0075325_101000223300014270Natural And Restored WetlandsMTRSFAGHRDTRREVAELIREIQQLTAERRRLEARGAGGGERDENEREIDELRWLLAEAARHEASEEPVQAA*
Ga0075326_100670923300014271Natural And Restored WetlandsMTRSFAARRDVRREVAELIREIQQLTSERRRLEARSAGGGELVANEREIDELRWLLAEAARLEASDEPVRAA*
Ga0163163_1239723613300014325Switchgrass RhizosphereMTRTFTGRRDDRREVAGLISEIQQLTSERRRLVARGADGMELEANERSLDELRWLLADAARRSAVEPATAA*
Ga0157380_1057852413300014326Switchgrass RhizosphereMTRTLAGPSEERHEVADLIREIQQLTAERRRLAARSADGLELDANEREIDELRWLLADAARRA
Ga0132258_1001322723300015371Arabidopsis RhizosphereMTGTFAQRRDGRREVAALVSEIQQLTSERRRLQARGDVGMELEANERALDELRWLLAEAARRSAVEPATAA*
Ga0132256_10146633223300015372Arabidopsis RhizosphereMTRTFAGRQDGRCEVADLIREIQQLTAERRRLEARRADGRELDANEREIDELRWLLAEAARRAATDEPVHAA*
Ga0132255_10156499223300015374Arabidopsis RhizosphereMTRTFAQRRDGRREVAGLIRGIQQLTTERRRLVASGAEGVELEANERSLDELRWLLAEAARRSAVEPASAA*
Ga0132255_10235576713300015374Arabidopsis RhizosphereMTRTFAQRRDGRREVAGLVSEIQQLTTERRRLVARGADGAELEANERTLDELRWLLADAARRSAVEPASAA*
Ga0132255_10359966513300015374Arabidopsis RhizosphereHAMLEGVSSKRRRRSGMSRTFAQRRDGRREVAGLISEIQQLTTERRRLVARGAEGVELEANERSLDELRWLLAEAARRSAVEPVTAA*
Ga0190266_1001657023300017965SoilMTRTFAGRSDGRHEVADLIREIQQLTAERRRLAARSADGIELDTNEREIDELRWLLADAARGAASAGPARAA
Ga0190266_1064948623300017965SoilMTRMFAGRQDGRREVADLIREIQQLTAERRRLEARRAGGDELGTNEREIDELRWLLAEAARRAATDEPVHAA
Ga0190268_1010389423300018466SoilMTRTFAGRSDGRHEVADLIREIQQLTAERRRLAARSAEGIELDTNEREIDELRWLLADAARRAASAEPVRAA
Ga0190270_1079102723300018469SoilMTRTFAGRSEGRHEVADLIREIQQLTAERRRLAARSADGLELDTNEREIDELRWLLADAARRAASNGPARAA
Ga0190270_1147902913300018469SoilTRTFAGRSDGRHEVADLIREIQQLTAERRRLAARSADGIELDTNEREIDELRWLLADAARRAASGGPARAA
Ga0190270_1291435613300018469SoilMTRTFAERSDGRHEVADLIREIQQLTAERRRLAARSADGVELDTNEREIDELRWLLADAARRAASDGPARAA
Ga0190274_1038570533300018476SoilMTRTFAGRTDGRHEVADLIREIQQLTAERRRLAARSAEGIELDTNEREIDELRWLLADAARRAASDGPARAA
Ga0190274_1247061523300018476SoilMTRTFAGRNEERHEVADLIREIQQLTAERRRLAARSADGIELDTNEREIDELRWLLADAARRAASDGPARAA
Ga0190271_1157232623300018481SoilMTRTFAGRNEERHEVADLIREIQQLTAERRRLAARSADGAELDTNEREIDELRWLLADAARRAASNGPARAA
Ga0190271_1286858523300018481SoilMTRTFAGRTDGRHEVADLIREIQQLTAERRRLAARSADGVELDTNERQIDELRWLLADAARRAASDGPARAA
Ga0173481_1018583513300019356SoilTRTFAQRRDGRREVAGLIREIQQLTTERRRLVASGAEGVELEANERSLDELRWLLAEAARRSAVEPASAA
Ga0173481_1026902413300019356SoilMTGTFVGRQDGRREVADLIREIQQLTAERRRLEARRAGGDELGTNEREIDELRWLLAEAARRAATDEPVRAA
Ga0173481_1082379113300019356SoilMTRTFAQRRDGRREVAGLIREIQQLTTERRRLVAGGAEGVELEANERSLDELRWLLAEAARRSAVEP
Ga0173482_1035332013300019361SoilMTSTFAQRGDGRREVAGLISEIQQLTTERRRLVARGAGGVELEANERSLDELRWLLAEAARRSALEPATAA
Ga0190267_1095287923300019767SoilMTRTFAGRSDGRHEVADLIREIQQLTAERRRLAARSADGIELDTNEREIDELRWLLADAARRAASAGPARAA
Ga0197907_1112428513300020069Corn, Switchgrass And Miscanthus RhizosphereMTSTFAQRRDGRREVAGLISEIQQLTTERRRLVARGAGGVELEANERSLDELRWLLAEAARRSALEPATAA
Ga0247786_104477923300022883SoilMTRTFAQRRDGRREVAALVSEIQQLTSERRRLQARGDVGMELEANERALDELRWLLAEAARRSAVEPATAA
Ga0247786_108880623300022883SoilMTRTFAQRRDGRREVAGLISEIQQLTTERRRLVARGAEGFELEANERTLDELRWLLAEAARRSAVEPVSAA
Ga0247787_106823013300022893SoilMTRTFAQRRDGRREVAALVSEIQQLTSERRRLQARGDVGMELEANERALDELRWLLAEAARRSAVEP
Ga0247789_100887013300023266SoilKKGMTRTFAQRRDGRREVAALVSEIQQLTSERRRLQARGDVGMELEANERALDELRWLLAEAARRSAVEPATAA
Ga0207656_1050395213300025321Corn RhizosphereMSRTFAGRRDGRREVAGLISEIQQLTTERRRLVARGAEGVELEANERSLDELRWLLAEAARRSALEPATAA
Ga0210061_106768723300025537Natural And Restored WetlandsMTRSFAARRDVRREVAELIREIQQLTSERRRLEARSAGGGELDANEREIDELRWLLAEAARLEASDEPVRAA
Ga0210142_1000036253300025552Natural And Restored WetlandsMTRTFAQRRDGRREVAGLISEIQQLTTERRRLVARGAEGFELEANERTLDELRWLLAEAARRSAVEPVTAA
Ga0210087_103717823300025559Natural And Restored WetlandsTFAGRRDGRREVAALVSEIQQLTSERRRLQARGDVSMELEANERALDELRWLLADAARRSAVEPATAA
Ga0210076_102446923300025567Natural And Restored WetlandsMTRTFAGRRDGRREVAALVSEIQQLTSERRRLQARGDVSMELEANERALDELRWLLADAARRSAVEPATAA
Ga0210115_103759513300025791Natural And Restored WetlandsDGRREVAALVSEIQQLTSERRRLQARGDVSMELEANERALDELRWLLADAARRSAVEPATAA
Ga0210113_103323623300025796Natural And Restored WetlandsSFAGRGDVRREVAELIREIQQLTSERRRLEARSAGGGELVANEREIDELRWLLAEAARLEASDEPVRAA
Ga0207642_1022207313300025899Miscanthus RhizosphereMTRTLAGRGEERHEVADLIREIQQLTAERRRLAARSADGLELDANEREIDELRWLLADAARRAASDGPARAA
Ga0207643_1043890323300025908Miscanthus RhizosphereMTRTFAQRRDGRREVAGLIREIQQLTTERRRLVAGGAEGVELEANERSLDELRWLLAEAARRSAVEPASAA
Ga0207649_1045976023300025920Corn RhizosphereMTRTFAGRRDGRREVAGLISEIQQLTSERRRLVARGADGMELEANERSLDELRWLLADAARRSAVEPATAA
Ga0207681_1152443023300025923Switchgrass RhizosphereREVADLIREIQQLTAERRRLEARRAGGDELGTNEREIDELRWLLAEAARRAATDEPVRAA
Ga0207711_1142451413300025941Switchgrass RhizosphereMTSTFAQRRDGRREVAGLISEIQQLTTERRRLVARGAGGVELEANERSLDELRWLLADAARRSAVEPATAA
Ga0210116_103938023300025959Natural And Restored WetlandsMSRSLAGRREVAGLIREIQQLTAERRRLEARSAAAGELDDNEREIDELRWLLAEAARRDASDEPVPAA
Ga0207708_1121313523300026075Corn, Switchgrass And Miscanthus RhizosphereDGRREVAGLISEIQQLTTERRRLVARGAGGVELEANERSLDELRWLLAEAARRSALEPATAA
Ga0207708_1170004613300026075Corn, Switchgrass And Miscanthus RhizosphereMTRTFAGRQDGRREVADLIREIQQLTAERRRLEARRADGRELDANEREIDELRWLLAEAARRAATDEPVYAA
Ga0207648_1036187223300026089Miscanthus RhizosphereMTRTLAGPSEERHEVADLIREIQQLTAERRRLAARSADGLELDANEREIDELRWLLADAARRAASDGPARAA
Ga0208912_103188413300026090Natural And Restored WetlandsMTRSFAARRDVRREVAELIREIQQLTSERRRLEARSAGGGELVANEREIDELRWLLAEAARLEASDEPVRAA
Ga0209813_1048773613300027866Populus EndosphereMTRTFAQRRDGRREVAGLIREIQQLTTERRRLVAGGAEGVELEANERSLDELRWLLAEAARRSAVEPVSAA
Ga0207428_1044251823300027907Populus RhizosphereTGTFVGRQDGRREVADLIREIQQLTAERRRLEARRAGGDELGTNEREIDELRWLLAEAARRAATDEPVRAA
Ga0207428_1130200113300027907Populus RhizosphereSRTFAGRRDGRREVAGLISEIQQLTTERRRLVARGAEGVELEANERSLDELRWLLAEAARRSAVEPVTAA
Ga0247828_1004949923300028587SoilDGRREVAGLISEIQQLTTERRRLVARGAEGVELEANERSLDELRWLLAEAARRSAVEPVTAA
Ga0247818_1020758613300028589SoilMTRTFAQRRDGRREVAGLIREIQQLTTERRRLVASGAEGVELAANERSLAELRWLLAEAARRSAVEPASAA
Ga0247818_1069785323300028589SoilMTRTFAQRRDGRREVAGLIREIQQLTTERRRLVAGGAEGVELEANERTLDELRWLLAEAARRSAVEPASAA
Ga0247822_1063683523300028592SoilMTRTFAQRRDGRREVAGLIREIQQLTTERRRLVASGAEGVVLEANERAHVELRWLLAEAARRSAVEPACAGGD
Ga0247822_1133602823300028592SoilMTRTFAGRQDGRREVADLIREIQQLTAERRRLEARSAGGDELDTNEREIDELRWLLADAARRAATDEPVRAA
Ga0247821_1077695423300028596SoilRMCDLSTERNRMTRTFAGRMDGRHEVADLIREIQQLTAERRRLAERSADGIELDANEREIDELRWLLADAARRAASNEPVRAA
Ga0247825_1074052423300028812SoilTRTFAGRMDGRHEVADLIREIQQLTAERRRLAARSADGIELDANERETDELRWLLADAARRAASSGPARAA
Ga0247825_1102247323300028812SoilMTKAFAARRDGRQEVAGLIREIQQLTAERRRLLSRHAGDAELDANEREIDELRWLLAEAARRAATDEPVRAA
Ga0247825_1145409313300028812SoilPDWRYPPGVAPGGLRGCDASTERIRMTRTFAGRSDGRHEVADLIREIQQLTAERRRLAARSADGIELDTNEREIDELRWLLADAARRAASDEPVRAA
Ga0247826_1000096583300030336SoilMSRTFAGRRDGRREVAGLISEIQQLTTERRRLVARGAEGVELEANERSLDELRWLLAEAARRSAVEPVTAA
Ga0247826_1004752143300030336SoilMTRTFAGRMDGRHEVADLIREIQQLTAERRRLAERSADGIELDANEREIDELRWLLADAARRAASNEPVRAA
Ga0247826_1007255033300030336SoilMTRTFAQRRDGRREVAGLIREIQQLTTERRRLVASGAEGVELEANERSLDELRWLLAEAARRSAVEPASAA
Ga0247826_1008908923300030336SoilMTRTFAGRMDGRHEVADLIREIQQLTAERRRLAARSADGIELDANERETDELRWLLADAARRAASSGPARAA
Ga0310887_1081476923300031547SoilVADLIREIQQLTAERRRLERRRAGGDELGTNEREIDELRWLLAEAARRAATDEPVHAA
Ga0310886_1061512123300031562SoilMTRTFAGRQDGRREVADLIREIQQLTAERRRLERRRAGGDELGTNEREIDELRWLLAEAARRAATDEPVHAA
Ga0315553_1030895013300031652Salt Marsh SedimentMTRTIGERRDGRREVAGLVREIQQLTTERRRLRARAAAGAELEANERALDEMRWLLADASRRVAVEPASAA
Ga0310901_1036060213300031940SoilMTRTFAQRRDGRREVAALVSEIQQLTSERRRLQARGDVGMELEANERALDELRWLLAEAARRSA
Ga0310897_1052477713300032003SoilRDGRREVAALVSEIQQLTSERRRLQARGDVGMELEANERALDELRWLLAEAARRSAVEPATAA
Ga0310890_1093665513300032075SoilMTRTFAQRRDGRREVAGLIREIQQLTTERRRLVAGGAEGVELEANERTLDELRWLLAEAARRSAVEPASVA
Ga0310895_1038128813300032122SoilMTRTLAGRGEERHEVADLIREIQQLTAERRRLAARSADGLELDANEREIDELRWLLADAA
Ga0310811_1112345023300033475SoilMTRTFAQRRDGRREVAGLIREIQQLTTERRRLVASGAEGVDLEANERSLDELRWLLAEAARRSAVEPASAA
Ga0247830_1056515723300033551SoilMTRTFAGRSDGRHEVADLIREIQQLTAERRRLAARSADGIELDTNEREIDELRWLLADAARRAASDEPVRAA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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