Metagenome Family F052440

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052440
Family Type	Metagenome
Number of Sequences	142
Average Sequence Length	39 residues
Representative Sequence	MNDPQPEGHMASYIGRRKFLATLLGGAAAAWPLAARAQ
Number of Associated Samples	98
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.14 %
% of genes near scaffold ends (potentially truncated)	85.92 %
% of genes from short scaffolds (< 2000 bps)	92.25 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.831 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (42.254 % of family members)
Environment Ontology (ENVO)	Unclassified (59.859 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.408 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.97% β-sheet: 0.00% Coil/Unstructured: 53.03%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF04392	ABC_sub_bind	7.04
PF03401	TctC	4.93
PF13185	GAF_2	4.93
PF13378	MR_MLE_C	2.11
PF00042	Globin	1.41
PF04780	DUF629	1.41
PF02586	SRAP	1.41
PF13531	SBP_bac_11	1.41
PF04240	Caroten_synth	0.70
PF00536	SAM_1	0.70
PF01135	PCMT	0.70
PF05988	DUF899	0.70
PF04909	Amidohydro_2	0.70
PF02796	HTH_7	0.70
PF04828	GFA	0.70
PF07676	PD40	0.70
PF02357	NusG	0.70
PF04679	DNA_ligase_A_C	0.70
PF01255	Prenyltransf	0.70
PF02518	HATPase_c	0.70
PF08241	Methyltransf_11	0.70
PF07883	Cupin_2	0.70
PF13676	TIR_2	0.70
PF12697	Abhydrolase_6	0.70
PF03466	LysR_substrate	0.70
PF00027	cNMP_binding	0.70
PF13481	AAA_25	0.70
PF00106	adh_short	0.70
PF17172	GST_N_4	0.70
PF13458	Peripla_BP_6	0.70
PF00775	Dioxygenase_C	0.70
PF14022	DUF4238	0.70
PF01738	DLH	0.70
PF02163	Peptidase_M50	0.70
PF13467	RHH_4	0.70
PF11319	VasI	0.70
PF04226	Transgly_assoc	0.70
PF12307	DUF3631	0.70
PF13302	Acetyltransf_3	0.70
PF00665	rve	0.70
PF05163	DinB	0.70
PF06808	DctM	0.70
PF00589	Phage_integrase	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	7.04
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	4.93
COG1017	Hemoglobin-like flavoprotein	Energy production and conversion [C]	1.41
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	1.41
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.70
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.70
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.70
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.70
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.70
COG3485	Protocatechuate 3,4-dioxygenase beta subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.70
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.70
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.70
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.70
COG0020	Undecaprenyl pyrophosphate synthase	Lipid transport and metabolism [I]	0.70
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.70
COG2324	Uncharacterized membrane protein	Function unknown [S]	0.70
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.70
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.70
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.70
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.70
COG0250	Transcription termination/antitermination protein NusG	Transcription [K]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.83 %
Unclassified	root	N/A	28.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.83 %
Unclassified	root	N/A	28.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.83 %
Unclassified	root	N/A	28.17 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	57.04 %
Unclassified	root	N/A	28.17 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.41 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.70 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.70 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	47.18 %
Unclassified	root	N/A	28.17 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.41 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.41 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.70 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.17 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	20.42 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	12.68 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.41 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	1.41 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.70 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.70 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.17 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	13.38 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	12.68 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1.41 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.41 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.41 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.70 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.70 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.70 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.17 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	12.68 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	11.27 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.41 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.41 %
Pseudosulfitobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Pseudosulfitobacter	0.70 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.70 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.70 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.70 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.70 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.17 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	12.68 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.41 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.41 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.41 %
unclassified Pseudosulfitobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Pseudosulfitobacter → unclassified Pseudosulfitobacter	0.70 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	0.70 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.70 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.70 %
Microvirga massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	0.70 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.70 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.70 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.17 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	12.68 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.41 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.41 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.41 %
Methylobacterium sp. WL7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. WL7	0.70 %
Pseudosulfitobacter sp. DSM 107133	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Pseudosulfitobacter → unclassified Pseudosulfitobacter → Pseudosulfitobacter sp. DSM 107133	0.70 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	0.70 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.70 %
Microvirga massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	0.70 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.70 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.70 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459003\|FZN2CUW02G3Q6C	Not Available	524	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10023350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1689	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10108447	Not Available	682	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10052057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	913	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1008947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1413	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1041938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	644	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1027192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	909	Open in IMG/M
3300002910\|JGI25615J43890_1072875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	593	Open in IMG/M
3300005332\|Ga0066388_101069467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1361	Open in IMG/M
3300005332\|Ga0066388_103089949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	851	Open in IMG/M
3300005332\|Ga0066388_103492488	All Organisms → cellular organisms → Bacteria → Proteobacteria	802	Open in IMG/M
3300005332\|Ga0066388_104047447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	747	Open in IMG/M
3300005332\|Ga0066388_106606501	All Organisms → cellular organisms → Bacteria → Proteobacteria	584	Open in IMG/M
3300005445\|Ga0070708_101845009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	561	Open in IMG/M
3300005468\|Ga0070707_100177196	All Organisms → cellular organisms → Bacteria → Proteobacteria	2078	Open in IMG/M
3300005713\|Ga0066905_100839698	Not Available	799	Open in IMG/M
3300005713\|Ga0066905_101312016	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300005713\|Ga0066905_101349025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	643	Open in IMG/M
3300005713\|Ga0066905_102141834	All Organisms → cellular organisms → Bacteria → Proteobacteria	521	Open in IMG/M
3300005764\|Ga0066903_100599516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1908	Open in IMG/M
3300005764\|Ga0066903_101279456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1368	Open in IMG/M
3300005764\|Ga0066903_101371042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1326	Open in IMG/M
3300005764\|Ga0066903_101419007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1306	Open in IMG/M
3300005764\|Ga0066903_103875330	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300005764\|Ga0066903_104681873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	728	Open in IMG/M
3300005764\|Ga0066903_104986325	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	704	Open in IMG/M
3300005764\|Ga0066903_105983485	All Organisms → cellular organisms → Bacteria → Proteobacteria	637	Open in IMG/M
3300005764\|Ga0066903_107392834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	567	Open in IMG/M
3300006847\|Ga0075431_101031162	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300006854\|Ga0075425_102563255	Not Available	564	Open in IMG/M
3300009792\|Ga0126374_10762478	Not Available	735	Open in IMG/M
3300010043\|Ga0126380_10141008	All Organisms → cellular organisms → Bacteria	1526	Open in IMG/M
3300010046\|Ga0126384_12103048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	542	Open in IMG/M
3300010359\|Ga0126376_11664774	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300010362\|Ga0126377_10452925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1306	Open in IMG/M
3300010362\|Ga0126377_11372329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	779	Open in IMG/M
3300010362\|Ga0126377_12112531	Not Available	639	Open in IMG/M
3300010366\|Ga0126379_13576618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	521	Open in IMG/M
3300010373\|Ga0134128_12822018	Not Available	535	Open in IMG/M
3300010376\|Ga0126381_101502490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	973	Open in IMG/M
3300010376\|Ga0126381_102439620	Not Available	750	Open in IMG/M
3300010398\|Ga0126383_10809614	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300010398\|Ga0126383_11550623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	752	Open in IMG/M
3300010400\|Ga0134122_13333726	Not Available	505	Open in IMG/M
3300012204\|Ga0137374_11010815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	600	Open in IMG/M
3300012206\|Ga0137380_10679763	All Organisms → cellular organisms → Bacteria → Proteobacteria	895	Open in IMG/M
3300012948\|Ga0126375_10758511	Not Available	763	Open in IMG/M
3300016270\|Ga0182036_10403304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1066	Open in IMG/M
3300016270\|Ga0182036_10817482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	760	Open in IMG/M
3300016270\|Ga0182036_11143689	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300016319\|Ga0182033_10093353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2193	Open in IMG/M
3300016341\|Ga0182035_10311178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1295	Open in IMG/M
3300016357\|Ga0182032_10430258	All Organisms → cellular organisms → Bacteria → Proteobacteria	1073	Open in IMG/M
3300016371\|Ga0182034_11634176	Not Available	566	Open in IMG/M
3300016404\|Ga0182037_10554570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	970	Open in IMG/M
3300021560\|Ga0126371_11411870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	827	Open in IMG/M
3300021560\|Ga0126371_11414010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	826	Open in IMG/M
3300025910\|Ga0207684_10469277	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300025928\|Ga0207700_10196863	All Organisms → cellular organisms → Bacteria → Proteobacteria	1696	Open in IMG/M
3300026324\|Ga0209470_1360488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. WL7	520	Open in IMG/M
3300027527\|Ga0209684_1001248	All Organisms → cellular organisms → Bacteria → Proteobacteria	4537	Open in IMG/M
3300027654\|Ga0209799_1007694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	2269	Open in IMG/M
3300028878\|Ga0307278_10190707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	915	Open in IMG/M
3300031545\|Ga0318541_10033740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2552	Open in IMG/M
3300031545\|Ga0318541_10157973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1246	Open in IMG/M
3300031564\|Ga0318573_10184732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1102	Open in IMG/M
3300031572\|Ga0318515_10323828	All Organisms → cellular organisms → Bacteria → Proteobacteria	827	Open in IMG/M
3300031573\|Ga0310915_10720030	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300031640\|Ga0318555_10522196	Not Available	643	Open in IMG/M
3300031640\|Ga0318555_10523551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	642	Open in IMG/M
3300031668\|Ga0318542_10337145	Not Available	774	Open in IMG/M
3300031668\|Ga0318542_10555614	Not Available	598	Open in IMG/M
3300031681\|Ga0318572_10928336	Not Available	517	Open in IMG/M
3300031682\|Ga0318560_10382160	Not Available	761	Open in IMG/M
3300031713\|Ga0318496_10374456	Not Available	787	Open in IMG/M
3300031719\|Ga0306917_10336187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1171	Open in IMG/M
3300031724\|Ga0318500_10101772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1308	Open in IMG/M
3300031736\|Ga0318501_10391929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	750	Open in IMG/M
3300031747\|Ga0318502_11008310	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300031763\|Ga0318537_10258612	Not Available	645	Open in IMG/M
3300031763\|Ga0318537_10307504	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300031768\|Ga0318509_10023932	Not Available	2901	Open in IMG/M
3300031768\|Ga0318509_10811365	Not Available	517	Open in IMG/M
3300031770\|Ga0318521_10822702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	566	Open in IMG/M
3300031777\|Ga0318543_10427814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	593	Open in IMG/M
3300031778\|Ga0318498_10183558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	950	Open in IMG/M
3300031778\|Ga0318498_10519273	Not Available	524	Open in IMG/M
3300031781\|Ga0318547_10787268	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300031792\|Ga0318529_10076678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1482	Open in IMG/M
3300031797\|Ga0318550_10630865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300031798\|Ga0318523_10323477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	769	Open in IMG/M
3300031835\|Ga0318517_10232019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	832	Open in IMG/M
3300031845\|Ga0318511_10504393	Not Available	560	Open in IMG/M
3300031846\|Ga0318512_10278850	Not Available	828	Open in IMG/M
3300031860\|Ga0318495_10154870	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300031879\|Ga0306919_10345904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	1135	Open in IMG/M
3300031879\|Ga0306919_10939265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Pseudosulfitobacter → unclassified Pseudosulfitobacter → Pseudosulfitobacter sp. DSM 107133	662	Open in IMG/M
3300031880\|Ga0318544_10444787	Not Available	504	Open in IMG/M
3300031890\|Ga0306925_10165645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2380	Open in IMG/M
3300031890\|Ga0306925_10689241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1070	Open in IMG/M
3300031890\|Ga0306925_11055189	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300031894\|Ga0318522_10428808	Not Available	501	Open in IMG/M
3300031896\|Ga0318551_10443652	Not Available	741	Open in IMG/M
3300031910\|Ga0306923_10717555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1111	Open in IMG/M
3300031912\|Ga0306921_11689466	Not Available	685	Open in IMG/M
3300031941\|Ga0310912_10762378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	748	Open in IMG/M
3300031942\|Ga0310916_11282983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	603	Open in IMG/M
3300031946\|Ga0310910_10298864	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300031947\|Ga0310909_11244872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	600	Open in IMG/M
3300031954\|Ga0306926_10256476	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2166	Open in IMG/M
3300031954\|Ga0306926_11112690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	933	Open in IMG/M
3300031954\|Ga0306926_11579842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	753	Open in IMG/M
3300031959\|Ga0318530_10397491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	571	Open in IMG/M
3300032025\|Ga0318507_10547319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300032035\|Ga0310911_10430983	Not Available	763	Open in IMG/M
3300032035\|Ga0310911_10451632	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300032035\|Ga0310911_10559390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	663	Open in IMG/M
3300032039\|Ga0318559_10048847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1764	Open in IMG/M
3300032039\|Ga0318559_10078685	Not Available	1432	Open in IMG/M
3300032041\|Ga0318549_10235433	Not Available	823	Open in IMG/M
3300032043\|Ga0318556_10397016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	721	Open in IMG/M
3300032051\|Ga0318532_10353894	Not Available	521	Open in IMG/M
3300032052\|Ga0318506_10113254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1168	Open in IMG/M
3300032055\|Ga0318575_10442238	All Organisms → cellular organisms → Bacteria → Proteobacteria	660	Open in IMG/M
3300032059\|Ga0318533_11156598	Not Available	566	Open in IMG/M
3300032064\|Ga0318510_10300528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	669	Open in IMG/M
3300032065\|Ga0318513_10053427	Not Available	1814	Open in IMG/M
3300032076\|Ga0306924_10481093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1416	Open in IMG/M
3300032076\|Ga0306924_10894609	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300032076\|Ga0306924_10970370	Not Available	935	Open in IMG/M
3300032090\|Ga0318518_10020131	Not Available	2931	Open in IMG/M
3300032091\|Ga0318577_10144973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1129	Open in IMG/M
3300032180\|Ga0307471_103350011	Not Available	568	Open in IMG/M
3300032261\|Ga0306920_101330454	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300032261\|Ga0306920_102386245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	730	Open in IMG/M
3300032261\|Ga0306920_104435803	Not Available	502	Open in IMG/M
3300033289\|Ga0310914_10239704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1628	Open in IMG/M
3300033289\|Ga0310914_11641757	Not Available	546	Open in IMG/M
3300033290\|Ga0318519_10138233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1351	Open in IMG/M
3300033290\|Ga0318519_10949938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	532	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.59%
Host-Associated	Host-Associated	1.41%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.59%
Plants	Host-Associated → Plants	1.41%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.41%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.69%
Loam	Environmental → Terrestrial → Soil → Loam	16.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.41%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	64.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.41%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	42.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	14.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.23%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.41%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.41%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.70%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.70%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_11052720	2170459003	Grass Soil	MNDPQAEGHMASYIRRRKFLATLGGAAVWPLAARAQQ
AF_2010_repII_A1DRAFT_100233503	3300000597	Forest Soil	MNDPQPEGHMASHIARRKFLATLGGAAAVTWPLAAHAQQRRCR*
AF_2010_repII_A1DRAFT_101084472	3300000597	Forest Soil	MNDPQLEGHMASYXXRRKFLATLLGGAAAGWPLAAG
AF_2010_repII_A001DRAFT_100520573	3300000793	Forest Soil	MDDPQPEGHMASYIARRKFLATLGDVAVAWPLAVPHSVV*
AP72_2010_repI_A100DRAFT_10089471	3300000837	Forest Soil	MNDPQPEGHMASYIARRKFLATLLGGTAVAWPLAARAQQ
AP72_2010_repI_A100DRAFT_10419382	3300000837	Forest Soil	MNDPQPEGHMASYIGRRKFLATLGGAAATWPLAAGARAAGAG
AP72_2010_repI_A001DRAFT_10271921	3300000893	Forest Soil	PEPEGHMASYIERRKFLSTLGGLAAAWPLAARAQHWAAD*
JGI25615J43890_10728752	3300002910	Grasslands Soil	MNDPQPEGHMASHIGRRKFLATLLGGAAAAWPLAARAQQSAMRCD
Ga0066388_1010694671	3300005332	Tropical Forest Soil	MNDPQTEGQLASYIGRRKFLATLLGGAAAAWPLAAWAQQPALPVG*
Ga0066388_1030899491	3300005332	Tropical Forest Soil	HCMNDPRPEGHMASYIRRRKFLATLGGAAAWPLAARAQQPAYEGGRK*
Ga0066388_1034924882	3300005332	Tropical Forest Soil	MNDAQAEGHMVSHIERRKFLATLGAAAAWPLAVRAQGAALAEP*
Ga0066388_1040474472	3300005332	Tropical Forest Soil	MNDPQPEGHMASYIARRKFFATLLGGAAVAWPLAARAKRQAAQQ*
Ga0066388_1066065012	3300005332	Tropical Forest Soil	MNDPQPEGHMAGYIRRRKFLFLATLLGGAAVGPLAARGQSAVPVIG*
Ga0070708_1018450091	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNDPQPEGQMASYIRRRNFLATLGGAAAWPLVARAQQAQ*
Ga0070707_1001771961	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MNDPQPEGHMASYIRRREFLATLGGAAAWPLAARAQQPVVGSG*
Ga0066905_1008396983	3300005713	Tropical Forest Soil	MNDPQPQGHMASHIGRRKFLATLGGAAAAWPLPARAQ*
Ga0066905_1013120162	3300005713	Tropical Forest Soil	MKDPQPGGHMASHIERRRFLATLGGAAAAWPLAAR
Ga0066905_1013490251	3300005713	Tropical Forest Soil	RCMNDPQPEGHMASDIERRKFLATLGDAAATWPLAARAQQLSELET*
Ga0066905_1021418342	3300005713	Tropical Forest Soil	HCMNDPQPEGHMASHIERRKFLATLGGAAAAWPLAARAQPAKAA*
Ga0066903_1005995162	3300005764	Tropical Forest Soil	MNDPQPEGHMASHTERRKFLAALGGTAVAWPLAARGQQYQWR*
Ga0066903_1012794561	3300005764	Tropical Forest Soil	MNDPQPEGHMASHIERRKFLATLCGAAAWPLAARAQQ
Ga0066903_1013710421	3300005764	Tropical Forest Soil	MNDPQPEGHMASYIARRKFLATLLGGAAAWPLAAR
Ga0066903_1014190071	3300005764	Tropical Forest Soil	MGMTPQVEGHMASHIGRRKFLATLGGAAAWPLAAR
Ga0066903_1038753303	3300005764	Tropical Forest Soil	MNDPQPEGHMASYIRRREILATLGCAVAWPLAARA
Ga0066903_1046818731	3300005764	Tropical Forest Soil	MNDPQAEGHTASYIVRRKFLATLGDAALAWPVAARVQRPTGRRE
Ga0066903_1049863252	3300005764	Tropical Forest Soil	MNDPQPEGHMASHIGRRKFLATLGGAAVAWPQPARRIEN*
Ga0066903_1059834852	3300005764	Tropical Forest Soil	MNDPQAEGHMVSHIERRKFLATLGAAAAWPLAVRAQGAALAEP*
Ga0066903_1073928342	3300005764	Tropical Forest Soil	MNDPQLEGHMASYIARRKFLATLGSAAAAWPLASATIRGHTR
Ga0075431_1010311621	3300006847	Populus Rhizosphere	MNDPQPEGHMAIFGRRKFLMTLGGTAAAWPVRVWAHQPAAMRVIVLES*
Ga0075425_1025632551	3300006854	Populus Rhizosphere	PEGHMASYLGRRKFLATLGGAAAWPLAARAQSTTA*
Ga0126374_107624781	3300009792	Tropical Forest Soil	MKDLQPEGHMASHIERRKFLATLGGAAAWPLAARAQQMSVLG
Ga0126380_101410083	3300010043	Tropical Forest Soil	MNDPQPEGHMTSYLGRRKFLAMLGGATAWPVAARA
Ga0126384_121030483	3300010046	Tropical Forest Soil	NDPQREGHMASYIQRRKFLATLLGGAAVAWPLAAHAQQAGKVYRTP*
Ga0126376_116647741	3300010359	Tropical Forest Soil	MNDPQPEGHVASYIARRKFLATLGGAAVWPLAARAEQIVGHTGR*
Ga0126377_104529252	3300010362	Tropical Forest Soil	MNDPQAEGHTASYIVRRKFLATLGDAALAWPVAARVQRPTG
Ga0126377_113723292	3300010362	Tropical Forest Soil	MNDPQPEGHMASHIRRRKFLATLGGAAATWPLAARAEQSTKLPT
Ga0126377_121125312	3300010362	Tropical Forest Soil	MNDPQLEGHMASYIQRRKFLATLGGTVIAWPLAARA
Ga0126379_135766182	3300010366	Tropical Forest Soil	MTPKPEGHMASYIGRRKFLATLLGGAAAAWPLAARA
Ga0134128_128220182	3300010373	Terrestrial Soil	MLHGMNDPQPEGHMASHIGRRKFLATLGGAAVAWS
Ga0126381_1015024901	3300010376	Tropical Forest Soil	LHCMNDPQPEGHMASYIARRKFFATLLGGAAVAWPLAARAKRQAAQQ*
Ga0126381_1024396201	3300010376	Tropical Forest Soil	MNDPQPEGHMASYIARRKFFATLLGGAAAAWPLAARA*
Ga0126383_108096141	3300010398	Tropical Forest Soil	RCMNDPQPEGHMASHIGRRKFLATLGGAAAAWPLAAYAITFL*
Ga0126383_115506232	3300010398	Tropical Forest Soil	MNDPQLEGHMASYIRRRKFLTTLGGTAAWPLAARAQPSKSPLAR*
Ga0134122_133337262	3300010400	Terrestrial Soil	MDTPPAPEDHMAIHIGRREVLCTLASAAVTWPLAARAQQPAR
Ga0137374_110108152	3300012204	Vadose Zone Soil	CMNDPQPEGHMASYIERRKFLATLLGGAAVAWPLAARAQQAATRLD*
Ga0137380_106797631	3300012206	Vadose Zone Soil	MNDPQVEGHMASHIERRKLLATLGGAATWPLAARAAAGDAGD*
Ga0126375_107585111	3300012948	Tropical Forest Soil	PQPEGHMASYIRRRKLLATLLGGTAVAWPLAARSQQPAMKKLA*
Ga0126369_116295432	3300012971	Tropical Forest Soil	MGPNAVPFLHCMNDPQPEGHLASHIGRRKFLATLGGAAVAWPL
Ga0182036_104033043	3300016270	Soil	MNDPQPDGHMASHIARRKFLAMLGGAAGWPLAARAQQA
Ga0182036_108174822	3300016270	Soil	MNDPQPEGHMARYIARRKFLATLVGGAVVAWPVAARAAGR
Ga0182036_111436891	3300016270	Soil	MIPHCMNDPQPEGHMASHIGRRKFLATLLGGAAAW
Ga0182033_100933531	3300016319	Soil	NDPQPEGHMASYIRRRKFLATLVGGAAAAWPLAARAHLVISAKRL
Ga0182035_103111783	3300016341	Soil	NDPQPEGHMASHIARRKFLAMLGGAAGWPLAARAQQASKV
Ga0182032_104302581	3300016357	Soil	MNGPQPEGHLASYIQRRKFLATLGGSAAAAWPLAARA
Ga0182034_116341762	3300016371	Soil	MNDPQLEGHMASYIARRKFLATLGGAAAWPLAARAQAYPSRP
Ga0182037_105545701	3300016404	Soil	HCMNDPQPEGHMASYIARRKFFATLLGGAAVACPLAARAKRRAAQQ
Ga0126371_114118703	3300021560	Tropical Forest Soil	VNDPQREGHMASYIQRRKFLATLLGGAAVAWPLAAHAQQAGKVYRTP
Ga0126371_114140101	3300021560	Tropical Forest Soil	MNDPQPEGHMASYIRRRKFLATLLVGAAAAWPLAARAQQP
Ga0207684_104692772	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MNDPEPEGHMASYIARRKFLATLGGGAAAWPPAACAQQSAM
Ga0207700_101968633	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MNDPQSEGQMASHIGRRKFLASLGAASAWPLAARAQQP
Ga0209470_13604882	3300026324	Soil	MNDPQPKGHMASYIGRRKFLATLGGAAAVAWPLAARA
Ga0209684_10012487	3300027527	Tropical Forest Soil	MNDPQPEDHMASYIGRRKFLATLGGAAAAWPFASARKYDRT
Ga0209799_10076946	3300027654	Tropical Forest Soil	PQPEGHMGIARRKLLATLGAAAAWPLAARAQQGVIWARQVI
Ga0307278_101907073	3300028878	Soil	MNDPQPEGHMASYIGRRKFLATLGGAATWPLAARAQQSS
Ga0318541_100337403	3300031545	Soil	MNDLQPEGHMASYIERRKFLATLLGGVAVTWPLAVRAQRPARLLAGKI
Ga0318541_101579734	3300031545	Soil	MNDPQAEGHMASHIERRKFLATLGGAAASAWPLAA
Ga0318573_101847321	3300031564	Soil	MNDPQPEGHMASYIARRKFLAALGGVAAGWPLAARAQQA
Ga0318515_103238283	3300031572	Soil	MNDPQPEGHMASHIGRRKFLATLGGAAVAWPLGAR
Ga0310915_107200301	3300031573	Soil	EGHVASYIERRKFLATVGGAAVWPLAARAQQAVKI
Ga0318555_105221961	3300031640	Soil	SHHCMNGRQPECHMASHIERRKFLATLGGAAAAWSLAARAQQCYC
Ga0318555_105235513	3300031640	Soil	MNDPQPEGHMASYIARRKFLATLLGGAAAAWPLAA
Ga0318542_103371452	3300031668	Soil	MNDPQLEGHMASYIARRKFLATFGGAAAWPFAAGAQA
Ga0318542_105556142	3300031668	Soil	MNDPQPEGHMASYIGRRKFLATLGGATAAWPLAARAP
Ga0318572_109283361	3300031681	Soil	MNDPQPEGHMASYIERRKFLATLLGGAAAWPLAARAAGGPR
Ga0318560_103821601	3300031682	Soil	NGPQPEGHMASYIARRKFFATLLGGAAVAWPLAARAKRRAAQQ
Ga0318496_103744562	3300031713	Soil	MNDPQPEGHMASYLGRWKFLATLGGAATAWPFAAR
Ga0306917_103361871	3300031719	Soil	MNDPQPEGHMASHIERRKFLATLGSAAAAWPYVARAQRIDRTMRRVGVL
Ga0318500_101017723	3300031724	Soil	EGRMTVTIGRRELLVALGGAAAAWPLAARAPGFHVRC
Ga0318501_103919292	3300031736	Soil	MNDPQPEGHMASHIARRKFLAMLGGAAGWPLAARAQQASKV
Ga0318502_110083102	3300031747	Soil	MNDPQPEGHMASRIERRTFLATLGGAAATWPLAAWAQRPD
Ga0318537_102586121	3300031763	Soil	MNDPQPEGHMASYIARRKFLAALLGGAAASWPLAARAQQPAACVPLR
Ga0318537_103075041	3300031763	Soil	MNDPQPEGHMASHIRRRKFLATLGGAAAAWPLAAH
Ga0318509_100239321	3300031768	Soil	MNDPQPEGHMASYIRRRHFLATLLGGAAAWPLATRAQQRPGK
Ga0318509_108113651	3300031768	Soil	MNDPQPEGHMASHIGRRKFLATLGGAAAWPLAAHAQ
Ga0318521_108227021	3300031770	Soil	MNDPHPEGQMASHIERRKFLATLGGAAAAWPLDAR
Ga0318543_104278141	3300031777	Soil	MNDPQPEGHMASYIGRRKVLATLGGAAAWPLAARAQQQAV
Ga0318498_101835581	3300031778	Soil	MKTPKPEGHMASYIRRRKFLATLGGAVAWPIATHA
Ga0318498_105192731	3300031778	Soil	MNDPQPEGHMASYIRRRKFLATLGGAAVAWPLAAR
Ga0318547_107872682	3300031781	Soil	MNDPQPEGHMASDIERRKFLATLGGAVAVWPLAARAQQP
Ga0318529_100766782	3300031792	Soil	CINDPQPEGHMASHIGRRKFLATLGGAAAAWPLAADAQ
Ga0318550_106308651	3300031797	Soil	MNDPQPEGHMASYIQRRKFLATLGGAAAAWPLAAHSQGA
Ga0318523_103234772	3300031798	Soil	MNDPQPEGHMASYLGRRKFLATLLGGAAAWPLAGA
Ga0318517_102320192	3300031835	Soil	PQPEGHMASYIGRRKFLATLLGGAAVAWPLAARAKRRAAQQ
Ga0318511_105043931	3300031845	Soil	MNDPQPEGHMASYIRRRKFFATLLGGAAAAWPLAARAQQT
Ga0318512_102788502	3300031846	Soil	MNDPQPEGHMASYIARRKFLVTLLGGAAAAWPLAARAQQAR
Ga0318495_101548701	3300031860	Soil	MNGPQPEGHMASHIERRKFLATLGGAAAAWPLAAR
Ga0306919_103459041	3300031879	Soil	CMNDPQPEGHMASYIGRRKFLATLGGAAAWSLAAHAQCGG
Ga0306919_109392651	3300031879	Soil	MNDPQPEGHVASYIARRKFLATLGGAAAAWPLAARAQ
Ga0318544_104447872	3300031880	Soil	MNDPQPEGHMANHIGRRKLLATLGGAAVAWPLAARATWHR
Ga0306925_101656451	3300031890	Soil	MNDPQPEGHMASYIERRKFLATLGGVAAWPLAARHGLSDPS
Ga0306925_106892411	3300031890	Soil	MNDPQPEGHMASHFGRRKFLAALGGAAAWPFVARAQQPA
Ga0306925_110551891	3300031890	Soil	MTDPQPEGHMASYIRRRKFLATLLGGAAVAWPLAARAQQ
Ga0318522_104288081	3300031894	Soil	MNDPQPEGQMASHIGRRKFLATLGSATVAWPLAAP
Ga0318551_104436521	3300031896	Soil	MNDPQPEGQMASYLGRRQFLATLGGGAAAAWPLAA
Ga0306923_107175551	3300031910	Soil	MNDPQPEGHMARYIARRKFLATLVGSAAAWPFAARAQ
Ga0306921_116894662	3300031912	Soil	MNGPQPEGHLASYIGRRELLAALGGAAAWPLAAGAQQ
Ga0310912_107623782	3300031941	Soil	MNDPQPEGHMASYIRRRKFLATLLGGAALGWPLAARA
Ga0310916_112829832	3300031942	Soil	MNDPQPQGHMASHIGRRKFLVTLGGAAVTWPIAARAQ
Ga0310910_102988641	3300031946	Soil	MGMNDPQLEGHMASHIGRRKFLAALLGGVAVAWPLAAR
Ga0310909_112448723	3300031947	Soil	MNDPQPEGQMASHIGRRKFLAALGAVVVAWPLAARAQ
Ga0306926_102564761	3300031954	Soil	MNDPQPEGHMASYIARRKFFATLLGGAAVAWPLAARAKRR
Ga0306926_111126902	3300031954	Soil	MNDPQPEGHMASYIARRKFLATLLGGAAAAWPIAAGAQQTLSTRR
Ga0306926_115798422	3300031954	Soil	MIDPQPEGHMASHIGRRKFLATLGAAAAWPLAARA
Ga0318530_103974911	3300031959	Soil	MNDPQPEGHMASHIGRRKFLATLLGSAAAWPVAARAQQRPM
Ga0318507_105473191	3300032025	Soil	MNDPQPEGHMASYIGRRKVLATLGGAAAWPLAARA
Ga0310911_104309831	3300032035	Soil	MNDPQPEGHMASHIGRRKFLATLGGVVAGPLAPRGQQA
Ga0310911_104516322	3300032035	Soil	MNDPQPEGHMASYIRRRNFLATLGGAAAWPLADRQG
Ga0310911_105593901	3300032035	Soil	MNGPQPEGHMASYIRRRKFLATLLGGAVAWPLTIRAQQPAM
Ga0318559_100488473	3300032039	Soil	GRQPECHMASHIERRKFLATLGGAAAAWSLAARAQQCYC
Ga0318559_100786851	3300032039	Soil	RCMNDPQPEGHMASYIARRKFFATLLGGAAVAWPLAARAKRRAAQQ
Ga0318549_102354331	3300032041	Soil	CMNGPQPEGHMASYIARRKFFATLLGGAAVAWPLAARAKRRAAQQ
Ga0318556_103970161	3300032043	Soil	MNDPQPEGHMASYIRRRKFLATLLGGAAAWPLAARAQQGK
Ga0318532_103538941	3300032051	Soil	MNDPQPEGHMASHIGRRKFLATLGGAAAWPLATRA
Ga0318506_101132541	3300032052	Soil	MNDPQPEGHMASYIRRRECLAALGGAAVAWPLAARAQRP
Ga0318575_104422382	3300032055	Soil	MNDPQPEGHMARHIGRRRFLATLGGAAAAWPLAAG
Ga0318533_111565981	3300032059	Soil	MNDPRPEGHMASYIGRRRFLATLGGAAAWPLAAWA
Ga0318510_103005282	3300032064	Soil	MNDPQPEGHMASYIGRRKFLATLLGGAAAAWPLAARAQ
Ga0318513_100534271	3300032065	Soil	MNDPQPEGHMASYIRRRHFLATLLGGAAAWPLATR
Ga0306924_104810933	3300032076	Soil	MNDPLPEGHMASYIARRKFLATLAGAAACPLAPRAQQPAK
Ga0306924_108946092	3300032076	Soil	MNDPQPEGHMASYIARRNFLATLLGGAAAWPLVARAQQPA
Ga0306924_109703702	3300032076	Soil	MNGPQPEGHMASYIARRKFLATLLGGAVAWPLAARAQ
Ga0318525_106556231	3300032089	Soil	MTPKPEGHMASHIRRRKFLAALGGAAAAWPLAARAQQSAM
Ga0318518_100201311	3300032090	Soil	MNDPQPEGHMASYIRRRHFLATLLGGAAAWPLATRAQQ
Ga0318577_101449731	3300032091	Soil	GPQPEGHMASYIARRKFFATLLGGAAVAWPLAARAKRRAAQQ
Ga0307471_1033500111	3300032180	Hardwood Forest Soil	MNDPQPEGHMGSHIERRKFLATLGGAAAVWPLAARAQQ
Ga0306920_1013304541	3300032261	Soil	MNDPQPEGHMASDIERRKFLATLGGAVAVWPLAARAQQ
Ga0306920_1023862452	3300032261	Soil	MNDPQSEGHMASCIRRRKFLAMLGGGAAVWPLAAR
Ga0306920_1044358031	3300032261	Soil	MNDPQLEGHMASYIARRKFFATLGGAAAWPLAARAQAYPS
Ga0310914_102397044	3300033289	Soil	MGMTPTGGYMASYIARRKFLATLGGAAAAWPLGARAS
Ga0310914_116417571	3300033289	Soil	MNDPQPEGHMASYIARRKFLATLLGGAAAAWPLTARAQPPEVQ
Ga0318519_101382332	3300033290	Soil	MEAWYYCMNDPQSEGQMASCIQRRKFLATLLGGAAAAWPLAARAQ
Ga0318519_109499381	3300033290	Soil	VSFLHCMNDPQPEGHMASRIERRKFLATLGGAVSWPLAARA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F052440

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences