Metagenome / Metatranscriptome Family F052438

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052438
Family Type	Metagenome / Metatranscriptome
Number of Sequences	142
Average Sequence Length	79 residues
Representative Sequence	MFALFAMALLVMTSLGSKLLLTQGQRAKDLLRRVVSRRRGRCELGLVSAMVSLLQQDKTLYGALCPHVKLKLEATLGNVS
Number of Associated Samples	115
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	11.76 %
% of genes near scaffold ends (potentially truncated)	71.13 %
% of genes from short scaffolds (< 2000 bps)	82.39 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.746 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (22.535 % of family members)
Environment Ontology (ENVO)	Unclassified (26.761 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.845 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 60.19% β-sheet: 0.00% Coil/Unstructured: 39.81%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF01609	DDE_Tnp_1	3.52
PF13546	DDE_5	2.82
PF12762	DDE_Tnp_IS1595	2.11
PF03400	DDE_Tnp_IS1	2.11
PF14104	DUF4277	1.41
PF13614	AAA_31	1.41
PF01695	IstB_IS21	1.41
PF13751	DDE_Tnp_1_6	1.41
PF00248	Aldo_ket_red	0.70
PF13083	KH_4	0.70
PF13673	Acetyltransf_10	0.70
PF04909	Amidohydro_2	0.70
PF13358	DDE_3	0.70
PF10282	Lactonase	0.70
PF06689	zf-C4_ClpX	0.70
PF14280	DUF4365	0.70
PF02738	MoCoBD_1	0.70
PF01548	DEDD_Tnp_IS110	0.70
PF13340	DUF4096	0.70
PF00884	Sulfatase	0.70
PF13538	UvrD_C_2	0.70
PF02515	CoA_transf_3	0.70
PF00211	Guanylate_cyc	0.70
PF03404	Mo-co_dimer	0.70
PF00271	Helicase_C	0.70
PF05199	GMC_oxred_C	0.70
PF02492	cobW	0.70
PF03050	DDE_Tnp_IS66	0.70
PF00732	GMC_oxred_N	0.70
PF00078	RVT_1	0.70
PF04055	Radical_SAM	0.70
PF13592	HTH_33	0.70
PF04851	ResIII	0.70
PF14690	zf-ISL3	0.70
PF13561	adh_short_C2	0.70
PF10670	DUF4198	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	3.52
COG3293	Transposase	Mobilome: prophages, transposons [X]	3.52
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	3.52
COG5421	Transposase	Mobilome: prophages, transposons [X]	3.52
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	3.52
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	3.52
COG1662	Transposase and inactivated derivatives, IS1 family	Mobilome: prophages, transposons [X]	2.11
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	1.41
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	1.41
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.70
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.70
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.70
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.45 %
Unclassified	root	N/A	41.55 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.45 %
Unclassified	root	N/A	41.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.75 %
Unclassified	root	N/A	41.55 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	10.56 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	7.75 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.52 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.41 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.70 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.55 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	4.23 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	2.82 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.11 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.41 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.41 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.70 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	0.70 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.70 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.55 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4.23 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2.82 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	1.41 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.41 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	1.41 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.41 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.70 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.70 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.70 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.70 %
Chloroflexi incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis	0.70 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.70 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.55 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	3.52 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	1.41 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.41 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.70 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.70 %
SAR202 cluster	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster	0.70 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.70 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.70 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	0.70 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.70 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.70 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.70 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.70 %
Herpetosiphonales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales	0.70 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.70 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.55 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.82 %
Ciceribacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter	1.41 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.41 %
Olavius algarvensis Delta 1 endosymbiont	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont	0.70 %
Desulfobulbaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae	0.70 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.70 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.70 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.70 %
SAR202 cluster bacterium AD-804-J14_MRT_500m	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium AD-804-J14_MRT_500m	0.70 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.70 %
Candidatus Magnetobacterium	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium	0.70 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.70 %
Herpetosiphonaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae	0.70 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.70 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.70 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.70 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.55 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.82 %
Ciceribacter ferrooxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans	1.41 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.41 %
unclassified Desulfobulbaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → unclassified Desulfobulbaceae	0.70 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	0.70 %
Paraburkholderia caribensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia caribensis	0.70 %
Herpetosiphon	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → Herpetosiphon	0.70 %
Candidatus Magnetobacterium bavaricum	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium bavaricum	0.70 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	0.70 %
unclassified Nocardioidaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae	0.70 %
Olavius algarvensis Delta 1 endosymbiont	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont	0.70 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.70 %
SAR202 cluster bacterium AD-804-J14_MRT_500m	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium AD-804-J14_MRT_500m	0.70 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.70 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.70 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.70 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.55 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.82 %
Ciceribacter ferrooxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans	1.41 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.41 %
Singulisphaera acidiphila	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	0.70 %
Desulfobulbaceae bacterium BRH_c16a	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → unclassified Desulfobulbaceae → Desulfobulbaceae bacterium BRH_c16a	0.70 %
Nocardioidaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	0.70 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.70 %
Herpetosiphon aurantiacus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → Herpetosiphon → Herpetosiphon aurantiacus	0.70 %
Paraburkholderia caribensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia caribensis	0.70 %
Candidatus Magnetobacterium bavaricum	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium bavaricum	0.70 %
Olavius algarvensis Delta 1 endosymbiont	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont	0.70 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.70 %
SAR202 cluster bacterium AD-804-J14_MRT_500m	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium AD-804-J14_MRT_500m	0.70 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.70 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.70 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.70 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.55 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.82 %
Ciceribacter ferrooxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans	1.41 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.41 %
Herpetosiphon aurantiacus DSM 785	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → Herpetosiphon → Herpetosiphon aurantiacus → Herpetosiphon aurantiacus DSM 785	0.70 %
Singulisphaera acidiphila	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	0.70 %
Desulfobulbaceae bacterium BRH_c16a	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → unclassified Desulfobulbaceae → Desulfobulbaceae bacterium BRH_c16a	0.70 %
Nocardioidaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	0.70 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.70 %
Paraburkholderia caribensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia caribensis	0.70 %
Candidatus Magnetobacterium bavaricum	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium bavaricum	0.70 %
Olavius algarvensis Delta 1 endosymbiont	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont	0.70 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.70 %
SAR202 cluster bacterium AD-804-J14_MRT_500m	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium AD-804-J14_MRT_500m	0.70 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.70 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.70 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.70 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10366948	Not Available	695	Open in IMG/M
3300002908\|JGI25382J43887_10060577	All Organisms → cellular organisms → Bacteria	2051	Open in IMG/M
3300003373\|JGI25407J50210_10144244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → Herpetosiphon → Herpetosiphon aurantiacus → Herpetosiphon aurantiacus DSM 785	586	Open in IMG/M
3300005295\|Ga0065707_10015733	All Organisms → cellular organisms → Bacteria	2335	Open in IMG/M
3300005332\|Ga0066388_100349407	All Organisms → cellular organisms → Bacteria	2125	Open in IMG/M
3300005332\|Ga0066388_103914673	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300005332\|Ga0066388_104033585	Not Available	749	Open in IMG/M
3300005332\|Ga0066388_106344892	Not Available	596	Open in IMG/M
3300005332\|Ga0066388_107443120	Not Available	549	Open in IMG/M
3300005445\|Ga0070708_100024536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	5146	Open in IMG/M
3300005445\|Ga0070708_101519707	Not Available	624	Open in IMG/M
3300005447\|Ga0066689_10317215	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300005467\|Ga0070706_100052901	All Organisms → cellular organisms → Bacteria → Proteobacteria	3747	Open in IMG/M
3300005467\|Ga0070706_100312272	All Organisms → cellular organisms → Bacteria	1466	Open in IMG/M
3300005468\|Ga0070707_100604214	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300005535\|Ga0070684_100111028	All Organisms → cellular organisms → Bacteria	2459	Open in IMG/M
3300005540\|Ga0066697_10401855	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300005549\|Ga0070704_101321158	Not Available	660	Open in IMG/M
3300005557\|Ga0066704_10618694	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300005568\|Ga0066703_10423226	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300005575\|Ga0066702_10594394	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	665	Open in IMG/M
3300005575\|Ga0066702_10834677	Not Available	549	Open in IMG/M
3300005576\|Ga0066708_10430603	Not Available	846	Open in IMG/M
3300005764\|Ga0066903_108551655	Not Available	521	Open in IMG/M
3300005983\|Ga0081540_1108521	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300006032\|Ga0066696_10544160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	759	Open in IMG/M
3300006041\|Ga0075023_100600170	Not Available	512	Open in IMG/M
3300006049\|Ga0075417_10549761	Not Available	584	Open in IMG/M
3300006050\|Ga0075028_100972040	Not Available	527	Open in IMG/M
3300006853\|Ga0075420_101611761	Not Available	556	Open in IMG/M
3300006904\|Ga0075424_102678268	Not Available	521	Open in IMG/M
3300007265\|Ga0099794_10639036	Not Available	565	Open in IMG/M
3300009012\|Ga0066710_102601226	Not Available	728	Open in IMG/M
3300009089\|Ga0099828_10023114	All Organisms → cellular organisms → Bacteria	4892	Open in IMG/M
3300009090\|Ga0099827_10102525	Not Available	2277	Open in IMG/M
3300009090\|Ga0099827_10205755	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1639	Open in IMG/M
3300009090\|Ga0099827_10327317	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300009553\|Ga0105249_10454440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1320	Open in IMG/M
3300009806\|Ga0105081_1051798	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300009811\|Ga0105084_1124043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	501	Open in IMG/M
3300009814\|Ga0105082_1030344	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	858	Open in IMG/M
3300009817\|Ga0105062_1138406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	503	Open in IMG/M
3300009821\|Ga0105064_1077471	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300009822\|Ga0105066_1160243	Not Available	519	Open in IMG/M
3300010046\|Ga0126384_10524048	Not Available	1025	Open in IMG/M
3300010046\|Ga0126384_10985080	Not Available	767	Open in IMG/M
3300010046\|Ga0126384_11897935	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300010047\|Ga0126382_12011701	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300010095\|Ga0127475_1119697	All Organisms → cellular organisms → Bacteria → Terrabacteria group	801	Open in IMG/M
3300010146\|Ga0126320_1307628	Not Available	512	Open in IMG/M
3300010322\|Ga0134084_10409666	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300010358\|Ga0126370_12176905	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300010360\|Ga0126372_12997842	Not Available	524	Open in IMG/M
3300010362\|Ga0126377_11965817	Not Available	661	Open in IMG/M
3300010362\|Ga0126377_13322145	Not Available	520	Open in IMG/M
3300010366\|Ga0126379_11676891	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300010398\|Ga0126383_13296710	Not Available	527	Open in IMG/M
3300010398\|Ga0126383_13564622	Not Available	508	Open in IMG/M
3300010430\|Ga0118733_106456074	Not Available	612	Open in IMG/M
3300011270\|Ga0137391_10130526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium AD-804-J14_MRT_500m	2184	Open in IMG/M
3300011270\|Ga0137391_10131087	All Organisms → cellular organisms → Bacteria → Acidobacteria	2179	Open in IMG/M
3300011270\|Ga0137391_10573530	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont	949	Open in IMG/M
3300011270\|Ga0137391_10601629	Not Available	922	Open in IMG/M
3300011270\|Ga0137391_10901634	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300012189\|Ga0137388_11929052	Not Available	520	Open in IMG/M
3300012207\|Ga0137381_11483948	Not Available	570	Open in IMG/M
3300012211\|Ga0137377_10364715	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300012349\|Ga0137387_10686020	Not Available	741	Open in IMG/M
3300012351\|Ga0137386_10728373	Not Available	712	Open in IMG/M
3300012354\|Ga0137366_10033645	All Organisms → cellular organisms → Bacteria → Proteobacteria	3971	Open in IMG/M
3300012354\|Ga0137366_10592533	Not Available	795	Open in IMG/M
3300012355\|Ga0137369_10415363	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300012359\|Ga0137385_10051065	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → unclassified Desulfobulbaceae → Desulfobulbaceae bacterium BRH_c16a	3696	Open in IMG/M
3300012360\|Ga0137375_10639660	Not Available	878	Open in IMG/M
3300012478\|Ga0157328_1001486	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300012532\|Ga0137373_10031482	All Organisms → cellular organisms → Bacteria → Proteobacteria	5149	Open in IMG/M
3300012685\|Ga0137397_11232219	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300012917\|Ga0137395_10588273	Not Available	804	Open in IMG/M
3300012930\|Ga0137407_11199006	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300012971\|Ga0126369_12696443	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	581	Open in IMG/M
3300012976\|Ga0134076_10585976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	519	Open in IMG/M
3300014154\|Ga0134075_10446596	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	575	Open in IMG/M
3300015054\|Ga0137420_1398431	All Organisms → cellular organisms → Bacteria	3103	Open in IMG/M
3300015264\|Ga0137403_10058981	All Organisms → cellular organisms → Bacteria → Proteobacteria	3927	Open in IMG/M
3300015373\|Ga0132257_104634886	Not Available	500	Open in IMG/M
3300015374\|Ga0132255_101766172	Not Available	939	Open in IMG/M
3300018056\|Ga0184623_10034599	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2284	Open in IMG/M
3300018063\|Ga0184637_10277014	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300018081\|Ga0184625_10601384	Not Available	539	Open in IMG/M
3300018082\|Ga0184639_10108117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans	1471	Open in IMG/M
3300018432\|Ga0190275_11528739	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300018433\|Ga0066667_11533221	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	590	Open in IMG/M
3300019259\|Ga0184646_1371102	Not Available	644	Open in IMG/M
3300019377\|Ga0190264_10559632	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300021307\|Ga0179585_1147311	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300022195\|Ga0222625_1250576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	866	Open in IMG/M
3300025910\|Ga0207684_10247161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1539	Open in IMG/M
3300025935\|Ga0207709_11327587	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300025945\|Ga0207679_11157298	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300026317\|Ga0209154_1246607	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	625	Open in IMG/M
3300026325\|Ga0209152_10291698	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300026524\|Ga0209690_1291757	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300026536\|Ga0209058_1357473	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300026547\|Ga0209156_10423742	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300027748\|Ga0209689_1262247	Not Available	695	Open in IMG/M
3300027873\|Ga0209814_10440743	Not Available	575	Open in IMG/M
3300027880\|Ga0209481_10014985	All Organisms → cellular organisms → Bacteria	3375	Open in IMG/M
3300027903\|Ga0209488_11002490	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300028381\|Ga0268264_10480268	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300028705\|Ga0307276_10094921	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300031058\|Ga0308189_10229743	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300031092\|Ga0308204_10048431	Not Available	1023	Open in IMG/M
3300031092\|Ga0308204_10336090	Not Available	516	Open in IMG/M
3300031093\|Ga0308197_10020166	Not Available	1444	Open in IMG/M
3300031094\|Ga0308199_1176203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia caribensis	525	Open in IMG/M
3300031098\|Ga0308191_1010739	Not Available	823	Open in IMG/M
3300031098\|Ga0308191_1041748	Not Available	513	Open in IMG/M
3300031421\|Ga0308194_10016243	Not Available	1549	Open in IMG/M
3300031424\|Ga0308179_1003593	Not Available	1243	Open in IMG/M
3300031543\|Ga0318516_10748380	Not Available	553	Open in IMG/M
3300031547\|Ga0310887_10454234	All Organisms → cellular organisms → Bacteria → Terrabacteria group	764	Open in IMG/M
3300031573\|Ga0310915_10130407	All Organisms → cellular organisms → Bacteria	1724	Open in IMG/M
3300031736\|Ga0318501_10626698	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300031781\|Ga0318547_10890245	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300031796\|Ga0318576_10007691	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium bavaricum	3825	Open in IMG/M
3300031908\|Ga0310900_10125557	All Organisms → cellular organisms → Bacteria	1694	Open in IMG/M
3300031908\|Ga0310900_10526888	Not Available	923	Open in IMG/M
3300032035\|Ga0310911_10218119	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300032035\|Ga0310911_10482399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	718	Open in IMG/M
3300032126\|Ga0307415_100489285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans	1073	Open in IMG/M
3300032205\|Ga0307472_101600898	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	640	Open in IMG/M
3300032205\|Ga0307472_102598518	Not Available	516	Open in IMG/M
3300033551\|Ga0247830_10304814	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300034664\|Ga0314786_131276	Not Available	569	Open in IMG/M
3300034667\|Ga0314792_002984	All Organisms → cellular organisms → Bacteria	2313	Open in IMG/M
3300034681\|Ga0370546_007404	Not Available	1218	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.73%
Host-Associated	Host-Associated	11.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.69%
Plants	Host-Associated → Plants	11.27%
Aquatic	Environmental → Aquatic	7.04%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.04%
Sediment	Environmental → Aquatic → Sediment	4.23%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.52%
Freshwater	Environmental → Aquatic → Freshwater	2.11%
Marine	Environmental → Aquatic → Marine	0.70%
Roots	Host-Associated → Plants → Roots	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.90%
Loam	Environmental → Terrestrial → Soil → Loam	10.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.23%
Sand	Environmental → Terrestrial → Soil → Sand	4.23%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.11%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.41%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.70%
Coastal	Environmental → Aquatic → Marine → Coastal	0.70%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.70%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.66%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.34%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.23%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.23%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	4.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.11%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.41%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.70%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.70%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.15%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.23%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	4.23%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.23%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.11%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.41%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.41%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.41%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.41%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.70%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	0.70%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.70%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.70%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.70%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009806	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_50_60	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010095	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010146	Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010430	Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samples	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012478	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.9.old.080610	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300021307	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031098	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_186 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031424	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_150 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034664	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034667	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_103669482	3300001661	Forest Soil	LLVMTSLGSKLLLTQGQRAKDLLRRVVSRRRRRCELGLVSAMVSLLQQDKTLYGELCPHVKLKLEATLGNVS*
JGI25382J43887_100605771	3300002908	Grasslands Soil	LLAQGQRAKDLLRRVVSRRRGRCELGLMSAMVSLLQGDKTLYNDLCPHVKLKLEATLENVS*
JGI25407J50210_101442442	3300003373	Tabebuia Heterophylla Rhizosphere	AKARIAQIKAWARMFALFAIALLVLTSLGSKLLLPQGHKAKDLLRRVVSRRRGRCELGLVSAMVSLLQRDKTLYNALCPHMKLKLEATLENVTLLVNA*
Ga0065707_100157332	3300005295	Switchgrass Rhizosphere	MFALFAMALLVMTSLGSKLLLTQGQRAKDLLRRVVSRRRGRCELGLVSAMVSLLQQDKTLYGALCPHVKLKLEATLGNVS*
Ga0066388_1003494072	3300005332	Tropical Forest Soil	MTSLGSKLILAQGPRAKELLRRVVSRRRGRCELGLVSTMVSLLQRDKTLYNELCPHVKLKLEATLENVS*
Ga0066388_1039146732	3300005332	Tropical Forest Soil	ARMFALFAIALLVMTSLGSQLLLAPARGAPDLLRRVASRRRGRCELGLISAMVCLLRQDKRLYDTLCPHVKLRLEATLANVS*
Ga0066388_1040335852	3300005332	Tropical Forest Soil	TQIKAWSRMFALFAIALLVMTSLGSHLLLAQGQGAKALLRRVASRRRGRCELGLVSAMVKLLQQDKTLYDALSPHVKLKLEATLANVS*
Ga0066388_1063448921	3300005332	Tropical Forest Soil	LLAQGPRAQDLLRRVVSRRRGRCELGLVSAMVSLLQGDKTLYNELCPHVKLTLEATLENVS*
Ga0066388_1074431201	3300005332	Tropical Forest Soil	LALFAIAFLVMPSLGSKLLLTQGHRAKDVLRRVVSRRRSRCELGLVSAMVSLLPQDKTLYGELCPHVKLKLEATLGNVS*
Ga0070708_1000245363	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAQIKAWSRMFALFAIALLVMTSLGSRLLLAQGQGAKALLRRVASRRRGRCELGLVSAMVKLLQQDKTLYDDLSPHVKLKLEATLANVS*
Ga0070708_1015197071	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	WSRMFALFAMALLVMTSLGSKLLLTQGHRAKDLLRRVVSRRRGRCELGLVSAMVKLLQQDKTLYDELSPHVKLKVEATLANVS*
Ga0066689_103172152	3300005447	Soil	MTQIKAWSRRFALFAVAFLVMTSLGSRLLLAQGHRAKDLLRRVASRRRGCCELGLVSARVRLLQQDKTLYDALSPHVKLKLEATLANVS*
Ga0070706_1000529013	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LGSKLLLTQGQRAKDLLRRVVSRRRRRCELGLVSAMVSLLQQDKTLYGELCPHVKLKLEATLENVS*
Ga0070706_1003122722	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAQIKAWSRLFALFAIALLVMTSLGSRLLLAQGQGAKALLRRVASRRRGRCELGLVSAMVKLLQQDKTLYDDLSPHVKLKLEATLANVS*
Ga0070707_1006042143	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LGSKLLLTQGQRAKDLLRRVVSRRRRRCELGLVSAMVSLLQQDKTLYGDLCPHVKLKLEATLENVS*
Ga0070684_1001110281	3300005535	Corn Rhizosphere	ALFAIALLVMTSLGSRLLLAQGYKAKVLLRRVASRRRGRCELGLVSAMVRLLQQDKTLYDALSPHVKLKLEATLANVS*
Ga0066697_104018552	3300005540	Soil	IAQIKAWSRMFALFAMALLVMTSLGSKLLLTQGQRAKDLLRRVVSRRRGRCELGLVSAIVSLLQRDKTLYNDLCPHVKLKLEATLENVS*
Ga0070704_1013211581	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	GFAKARIAHIKAWSRMFALFAMALLVMTSLGSTLLLTQGPRAKDLLRRVVSRRRGRCELGLVSAMVSLLQQDKTLYGDLCPHVKLKLEATLENVS*
Ga0066704_106186942	3300005557	Soil	MVAGFTKARIAHIKAWSRMFALFAMALLVMTSLGSKLLLTQGQRAKDLLRRVVSRRRSHGELGLVSAMVSLLQQDKTLYGDLCPHVKLKLEATLENVS*
Ga0066703_104232262	3300005568	Soil	MVAGFTKARIAHIKAWSRMFALFAMALLVMTSLGSKLLLTQGQRAKDLLRRVVSRRRSHGELGLVSAMVSLLQQDKTLYGELCPHVKLKLEATLGNVS*
Ga0066702_105943942	3300005575	Soil	KARIAQIKAWSRMFALFAIALLAMISLGCRLLLSPSRGAPGLLRRVASRRRRRCELGLVSAMVHLLRQDQTLYDKLSPHAKLK*
Ga0066702_108346772	3300005575	Soil	IKAWSRMFALFAMALLAMTSLGSKLLLTQGQRAKDLLRRVVSRRRGRGELGLVSAMVSLLQQDKTLYGELCPHVKLKLEATLGNVS*
Ga0066708_104306031	3300005576	Soil	AQIKAWSRMFALFAMALLVMTSLGSKLLLAQGHRAKDLLRRVVSRRRGRCELGLVSAMVSLLQRDKTLYNDLCPHVKLKLEATLANVS*
Ga0066903_1085516551	3300005764	Tropical Forest Soil	AHIKAWSRMFALFAMALLVMTSLGSKLLLTQGQRAKDFLHRVVSRRRGRCELGLVSAMVSLLQQDKTLYGALCPHVKLK*
Ga0081540_11085214	3300005983	Tabebuia Heterophylla Rhizosphere	LTQGHRAKDVLRRVVSRRRSRCELGLVSAMVSLLPQDKTLYGELCPHVKLKLEATLGNVS
Ga0066696_105441602	3300006032	Soil	MFALFAMALLVMTSLGSKLLLTQGHRAKDLLRRVVSRRRSRCELGLVSAVVSLLQQDKTLYGELCPHVKLKLEATLGNVS*
Ga0075023_1006001702	3300006041	Watersheds	KAWSRMFALFAMALLVMTSLGSKLLLAQGHRAKDLLRRVVSRRRGRCELGLVSAMVSLLQRDKTLYNDLCPHVKLKLEATLENVS*
Ga0075417_105497611	3300006049	Populus Rhizosphere	VMTSLGSKLLLTQGQRAKDLLRRVVSRRRGRCELGLVSAMVSLLQQDKTLYGALCPHVKLKLEATLGNVS*
Ga0075028_1009720401	3300006050	Watersheds	MFALFAIALLVMTSLGSKLLLAQGQRAKDLLRRVASRRRGRCELGLIIAMVSLLQGDKTLYNDLCPHVKLKLEATLGNVS*
Ga0075420_1001892301	3300006853	Populus Rhizosphere	RAQDLLRRVVSRRRGRCELGLVSAMVSLLQGDKTLYNELSPHVKLKLEATLENVS*
Ga0075420_1016117611	3300006853	Populus Rhizosphere	ALFAIALLVMTSLGSYLLLAQGHRAKVLLRRVASRRRGRCELGLVSAMVKLLQQDKTLYDELSPHVKLKLEATLANVS*
Ga0075424_1026782682	3300006904	Populus Rhizosphere	WSRMFALFAIALLVMTSLGSCLLLAQGHRAKGLLRRVASRRRGRCELGLVSAMVWLLQQDKTLYDALSPHVQLKLEVTLANVS*
Ga0099794_106390361	3300007265	Vadose Zone Soil	KARIAQITAWSRMFALFAMALLVMTSLGSKLLLAQGQRAQALLRRVVSRRRGRCELGLVSATVSLLQRDKTLYNALCPHVKLKLEATLENVS*
Ga0066710_1026012262	3300009012	Grasslands Soil	MTSLGSKRLLTQGQRAKALLRRVVSRRRGRCELGLVSAMVSLLQRDKTLYNDLCPHVKLKLEATLENVS
Ga0099828_100231145	3300009089	Vadose Zone Soil	LKSQLGFTKARIAHIKAWSRMFALFAMALLVMTSLGSKLLLTQGHRAKDLLRRVVSRRRRRCELGLVSAMMSLLQQDKTLYGELCPHVKLKLEATLGNVS*
Ga0099827_101025252	3300009090	Vadose Zone Soil	FRDAKWWLGFAKARIAQIKAWSRMFALFAIALLVMTSLGSHLLLAQGQGAKALLRRVASRRRGRCELGLVSAMVKLLQQDKTLYDELSPHVKLKLEATLANVS*
Ga0099827_102057554	3300009090	Vadose Zone Soil	FAIALLVMTSLGSRLLLAQGHRAKDLLRRVASRRRGRCELGLVSAMVKLLQQDKTLYDALSPHVKLKLEATLANVS*
Ga0099827_103273171	3300009090	Vadose Zone Soil	LLLTQGQRAKDLLRRVVSRRRRRCELGLVSAMVSLLQQDKTLYGELCPHVKLK*
Ga0099827_114676021	3300009090	Vadose Zone Soil	RAKDLLRRVVSRRRRRCELGLVSAMMSLLQQDKTLYGELCPHVKLKLEATLGNVS*
Ga0105249_104544401	3300009553	Switchgrass Rhizosphere	SLGSKLLLAQGHRAKDLLRRVVSRRRGRCELGLVSAMVNLLQRDKTLYNDLCPHMKLKLEATLENVS*
Ga0105081_10517981	3300009806	Groundwater Sand	HIKAWSRMFALFAMALLVMTSLGSKLLLTQGQRAKDLLRRVVSRRRGRCELGLVSAMVSLLQQDKTLYGDLCPHVKLKLEATLENVS*
Ga0105084_11240432	3300009811	Groundwater Sand	FALFAMALLVMTSLGSTLLLTQGPRAKDLLRRVVSRRRGRCELGLVSAMVSLLQQDKTLYGDLCPHVKLKLEATLENVS*
Ga0105082_10303441	3300009814	Groundwater Sand	PSRGAPDLLRRVASRRRDRCELGLVSAMVSLLRQDKTLYDKLCPHATLRLEATLANVS*
Ga0105062_11384062	3300009817	Groundwater Sand	GFAKARIAQIKAWSRMFALFAIALLAMISLGCRLLLSPSRGSPGLLCRVASRRRRRCELGLVSAMVHLLRQDKTLYDKLSPHAKLKLEVSLANVS*
Ga0105064_10774712	3300009821	Groundwater Sand	MAQIKAWSRMFALFAIALLVMTSLGSQLLLTPSRRAPDLLRRIASRRRGRCELGLISAMVCLLRQDKTLYDMLCPHAKLTLEATLANVS*
Ga0105066_11602431	3300009822	Groundwater Sand	GSQLLLTPSRRAPDLLRRIASRRRGRCELGLISAMVCLLRQDKTLYDMLCPHAKLTLEATLANVS*
Ga0126384_105240482	3300010046	Tropical Forest Soil	FALLAMAWLVMASLGSKLIRAQGPRAQALLRRVVSRRRGRCELGLVSAMVSLLQGDKTLYNELCPHVKLKLEATLENVS*
Ga0126384_109850802	3300010046	Tropical Forest Soil	MTSLGSKLLLAQGHRAKNLLRRVVSRRRGRCELGLVSAMVSLLQQDKTLYNALCPHVRLKLQATLENVS*
Ga0126384_118979351	3300010046	Tropical Forest Soil	IAQIKAWSRMFALFAMALLVMTSLGSKLLLAQGHRAKDLLRRVVSRRRGRCELGLVSAMVSLLQRDKTLYNALCPHVKLKLEATLENVS*
Ga0126382_120117012	3300010047	Tropical Forest Soil	QGQRAKDLLRRVVSRRRGRCELGLVSAMVSLLQRDKTLYNDLCPHVKLKLEATLENVS*
Ga0127475_11196971	3300010095	Grasslands Soil	RTAVVMTSLGSHLLLAQGQGAKALLRRVASRRRGRCELGLVSAMVKLLQQDKTLYDELSPHVKLKLEATLANVS*
Ga0126320_13076282	3300010146	Soil	GQGAKALLRRVASRRRGRCELGLVSAMVKLLQQDKTLYDELSPHVKLKLEATLANVS*
Ga0134084_104096661	3300010322	Grasslands Soil	LGSHLLLAQGQGAKALLRRVASRRRGRCELGLVSAMVKLLQQDKTLYDELSPHVKLKLEATLANVS*
Ga0126370_121769051	3300010358	Tropical Forest Soil	MFALFAMALLVMASLGSKLLLAQGPRAQDLLRRVVSRRRGRCELGLVSAMVSLLQGDKTLYSELCPHVKLKLEATLENVS*
Ga0126372_129978421	3300010360	Tropical Forest Soil	LVVTSLGSNLLLTLGRSAKDLLRLVVSRRRSRCELGLVSAMVSLLQQDKTLYGALCPHVKLKLEATLGNVS*
Ga0126377_119658172	3300010362	Tropical Forest Soil	FAMALLGMTSLGSKLLLTQGQRAKDLLHRVVSRRRGRCELGLVSAMVSLLQHDKTLYDALCPHVQLKLEATLGNVS*
Ga0126377_133221452	3300010362	Tropical Forest Soil	WLGFAKARITQIKAWSRMFALFAIALLVMTSLGSCLLLAQGHRAKVLLRRVASRRRGRCELGLVSAMGSLLQQDKTLYGELCPHVKLKLEATLENVS*
Ga0126379_116768911	3300010366	Tropical Forest Soil	MAQIKAWSRLFALCAMALLVMTSLGSTLLLTQGQRAKALLRRVGSRRRGRGALGLVSAMGSLLQQDKTLDGDLCPHVKLK*
Ga0126383_132967101	3300010398	Tropical Forest Soil	EEGFRDAKWWLGFAKARLTQIKAWSRLFALFALALLVMTSLGSYLLLAQGHRAKVLLRRVASRRRGRCELGLVSAMVWLLQQDKTLYDALSPHVKLKLEVTLANVS*
Ga0126383_135646221	3300010398	Tropical Forest Soil	LGSKLLLAQGHRAKDLLRRVVSRRRGRCELGLVSAMVSLLQQDKTLYGDLCPHVKLKLEATLENVS*
Ga0118733_1064560741	3300010430	Marine Sediment	KAWSRMFALFAIALWVMTSLGCQLLLAPSRGAPALLRRVASRRRGRCELGLVGAIVSLLRQDKTLYGKLCPHAVLKLEAAIPGGR*
Ga0137391_101305262	3300011270	Vadose Zone Soil	QGQGAKALLRRVASRRRGRCELGLISAMVKLLQQDKTLYDALSPHVKLKLEATLANVS*
Ga0137391_101310873	3300011270	Vadose Zone Soil	QGQGAKALLRRVASRRRGRCELGLISAMVKLLQQDKTLYDELSPHVKLKLEATLANVS*
Ga0137391_105735301	3300011270	Vadose Zone Soil	RDAKWWLGFTKARIAQIKAWSRMFALFAMALLVMTSLGSKLLLAQGHRAKDLLRRVVSRRRGRCELGLVSAMVSLLQRDKTLYNDLCPHVKLKLEATLENVS*
Ga0137391_106016291	3300011270	Vadose Zone Soil	SRMFALFAMALLVMTSLGSKLLLTQGQRAKDLLRRVVSRRRRRCELGLVSAMVSLLQQDKTLYGELCPHVKLKLEATLGNVS*
Ga0137391_109016342	3300011270	Vadose Zone Soil	MTSLGSKLLLTQGRRAKDLLRRVVSRRRGRCELGLVSAMVNLLQQDKTLYGDLCPHVKLKLEAILENVS*
Ga0137388_119290522	3300012189	Vadose Zone Soil	AQIKAWSRMFALFAMALLVMTSLGSTLLLTQGPRAKDLLRRVVSRRRGRCELGLVSAMVSLLQQDKTLYGDLCPHVKLKLEATLENVS*
Ga0137381_114839482	3300012207	Vadose Zone Soil	AQIKAWSRMFALFAMALLVMTSLGSTLLLAQGQRAKDFLRRVVSRRRGRCALGLMSAMVRLLQGDKTLYNDLCPHVKLK*
Ga0137377_103647151	3300012211	Vadose Zone Soil	MFALFAMALLAMTSLGSKLLLTQGQRAKDLLRRVVSRRRGRGELGLVSAMVSLLQQDKTLYGELCPHVKLQLEATLGNVS*
Ga0137387_106860201	3300012349	Vadose Zone Soil	FAMALLVMTSLGSKLLLTQGQRAKDLLRRVVSRRRGRCELGLVSAMVSLLQQDKTLYGDLCPHVKLKLEATLENVS*
Ga0137386_107283732	3300012351	Vadose Zone Soil	AQMKAWSRMFALCARALLVMTSLGSTLLLAQGQRAKDFLRRVVSRRRGRCALGLMSAMVRLLQGDKTLYNDLCPHVKLK*
Ga0137366_100336451	3300012354	Vadose Zone Soil	KWWLGFAKARITQIKAWSRMFALFAIALLVMTSLGSCLLLAQGHRAKGLLRRVASRRRGRCELGLVSAMVRLLQQDKTLYDALSPHVKLKLEATLANVS*
Ga0137366_105925332	3300012354	Vadose Zone Soil	AQGQRAKDLLRRVASRRRGRCELGLISAMVSLLQGDKTLYNDLCPHVKLKLEATLGNVS*
Ga0137369_104153631	3300012355	Vadose Zone Soil	EGFRDAKWWLGLAKARITQIKAWSRMFALFAIALLVMTSLGSCLLLAQGHRAKGLLRRVASRRRGRCELGLVSAMVRLLQQDKTLYDALSPHVKLKLEATLANVS*
Ga0137385_100510654	3300012359	Vadose Zone Soil	MFALFAMALLVMTSLGSTLLLAKGQRAKDLLRRVVSRRRRRCELGLVSAMVSLLQRDKTLYNDLCPHVKLKLEATLENVS*
Ga0137375_106396602	3300012360	Vadose Zone Soil	MALLVMTSLGSKLLLTQGQRAKNLLRRVVSRRRGRCELGLVSAMVSLLQQDKTLYGDLCPHVKLKLEATLENVS*
Ga0157328_10014862	3300012478	Arabidopsis Rhizosphere	TSLGSRLLLAQGYKAKVLLRRVASRRRGRCELGLVSAMVRLLQQDKTLYDALSPHVKLKLEATLANVS*
Ga0137373_100314828	3300012532	Vadose Zone Soil	WSRMFALFAIALLVMTSLGSCLLLAQGHRAKGLLRRVASRRRGRCELGLVSAMVRLLQQDKTLYDALSPHVKLKLEATLANVS*
Ga0137397_101326681	3300012685	Vadose Zone Soil	SSRGAAALLRRVVSRRRGRCELSLVGAMVSLLRHDKTLYDALCPHHKLKLEATLANMS*
Ga0137397_112322192	3300012685	Vadose Zone Soil	DAKWWLGFAKARIAQIKAWSRMFALFAMALLIMTSLGSKLLLTQGHRAKDLLRRVVSRRRGRCELGLVSAIVSLLQRDKTLYNDLCPHVKRK*
Ga0137395_105882731	3300012917	Vadose Zone Soil	QIKAWSRMFALFAIALLTMISLGCRLLLSPSRGAPGLLRRVASRRRRRCELGLVSAMVHLLRQDQTLYDKLSPHAKLKLEASLANVS*
Ga0137359_117613351	3300012923	Vadose Zone Soil	ALLRRVVSRRRGRCELSLVGAMVSLLRHDKTLYDALCPHHKLKLEATLANMS*
Ga0137359_117748202	3300012923	Vadose Zone Soil	ALLRRVVSRRRGRCELSLVGAMVSLLRHDKTLYDALCPHHTLKLEATLANMS*
Ga0137407_111990061	3300012930	Vadose Zone Soil	MTSLGSTLLLTQGQRAKDLLRRVVSRRRRRCELGLVSAMVSLLQQDKTLYGELCPHVKLKLEATLGNVS*
Ga0126369_126964431	3300012971	Tropical Forest Soil	QIKAWSRMFALFAIALLVMTSLGSCLLLAQGHRAKVLLRRVASRRRGRCELGLVSAMVRLLQQDKTLYDALSPHVKLKLEVTLANVS*
Ga0134076_105859762	3300012976	Grasslands Soil	MFALFAIALLAMISLGCRLLLSPSRGAPGLLRRVASRRRRRCELGLVSAMVHLLRQDQTLYDKLSPHAKLKLEASLANVS*
Ga0134075_104465962	3300014154	Grasslands Soil	SRLLLAQGHRAKDLLRRVASRRRGRCELGLVSAMVRLLQQDKTLYDALSPHVKLKLEATLANVS*
Ga0137420_13984311	3300015054	Vadose Zone Soil	CHDEPRKPPLTAQGHRAKDLLRRGASRRRGRCELGLVSAMVRLLQQDKTLYDALSPHVKLKLEATLANVS*
Ga0137403_100589811	3300015264	Vadose Zone Soil	SLGSTLLLTQGPRAKALLRRVVSRRRGRCELGLVSVMVSLLQQDKTLYNALCPHVKLKLEATLANVS*
Ga0132257_1046348861	3300015373	Arabidopsis Rhizosphere	WSRMFALFAMALRVMTSLGSKLLLTQGHRAKALLRRVVSRRRRRCELGLVSAMVSLLQQDKTLYGDLCPHVKLNLEATLENVS*
Ga0132255_1017661721	3300015374	Arabidopsis Rhizosphere	GFRDAKWWLGFAKARIAQIKAWSRLFALFAMALLVMTSLGSKLLLAQGHRAKDLLRRVVSRRRGRCELGLVSAMVSLLQGDKTLYNELCPHVKLK*
Ga0184623_100345992	3300018056	Groundwater Sediment	TQGPRAKDLLRRVVSRRRGRCELGLVSAMVSLLQQDKTLYGDLCPHVKLKLEATLENVS
Ga0184637_102770143	3300018063	Groundwater Sediment	MAHIKAWSRMFALFAMALLVMTSLGSKLLLTQGQKAKALLRRVVSRRRSRCELGLVSAMVSLLQQDKTLYGELCPHVKLKLEATLGNVS
Ga0184625_106013841	3300018081	Groundwater Sediment	AKWWLGFAKARLAQIKAWSRMFALFAIALLVMTSLGSHLLLAQGHRAKDLLRRVASRRRGRCELGLVSAMVKLLQQDKTLYDELSPHVKLKLEATLANVS
Ga0184639_101081172	3300018082	Groundwater Sediment	MFALFAMALLVMTSLGSKLLLTQGQKAKALLRRVVSRRRSRCELGLVSAMVSLLQQDKTLYGELCPHVKLKLEATLGNVS
Ga0190275_115287392	3300018432	Soil	LGFAQARIQNLQAWSRLFALFAMALLVMTSLGIKLLLTQGQRAKDLLCRVVSRRRSRCELGLVSAMVSLLQQDKTLYGELCPHVKLKLEATLGNVS
Ga0066667_115332211	3300018433	Grasslands Soil	QIKAWSRMFALFAMALLVMTSLGTKLLLTQGQRAKDLLRRVVSRRRGRCELGLVSAIVSLLQRDKTLYNDLCPHVKLKLEATLENVS
Ga0184646_13711021	3300019259	Groundwater Sediment	LILTQGHRAKDLLRRVVSRRRRRCELGLVSAMVSLLQQDKTLYGELCPHVKLKLEATLGNVS
Ga0190264_105596321	3300019377	Soil	MFALFAIALLVMTSLGRQLVLAPSRGAPDLLRRVASRRRGRCELGLSSVMVNLLRQDKTLYHKLCPHAKLRLKATLANVS
Ga0179585_11473111	3300021307	Vadose Zone Soil	LAFAKARMAQIKAWSRMFALFAIALLVMTTLGSRLLLASSRGAAALLRRVVSRRRGRCELSLVGAMVSLLRHDKTLYDALCPHHKLKLEATL
Ga0222625_12505761	3300022195	Groundwater Sediment	EGFRDAKWWLGFTKARMAQIKAWSRMFALFAIALLVMTSLGSKLLLAQGPRAKALLRRVVSRRRGRCELGLVSAMVSLLQRDKTLYNDLCPHVKLK
Ga0207684_102471613	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAQIKAWSRLFALFAIALLVMTSLGSRLLLAQGQGAKALLRRVASRRRGRCELGLVSAMVKLLQQDKTLYDDLSPHVKLKLEATLANVS
Ga0207709_113275872	3300025935	Miscanthus Rhizosphere	MFALFAMTLLVMTSLGSKLLLTQGQRAKDLLRRVVSRRRRRCELGLVSAMVSLLQQDKTLYGELCPHVKLKLEATLGNVS
Ga0207679_111572981	3300025945	Corn Rhizosphere	LVMTSLGSCLLLSQGHRAQVLLRRVASRRRGRCELGLVSAMVWLLQQDKTLYDALSPHVKLKLEVTLANVS
Ga0209154_12466072	3300026317	Soil	AQGQGAKALLRRVASRRRGRCELGLVSAMVKLLQQDKTLYDELSPHVKLKLEATLANVS
Ga0209152_102916982	3300026325	Soil	LLVMTSLGSKLLLTQGQRAKDLLCRVVSRRRGRCELGLVSAIVSLLQRDKTLYNDLCPHVKLKLEATLENVS
Ga0209690_12917572	3300026524	Soil	MFALCAMALLVMTSLGSKLLLAQGHRAKDLLRRVVSRRRGRCELGLVSAMVSLLQQDKTLYGELCPHVKLKLEATLGNVS
Ga0209058_13574732	3300026536	Soil	MTSLGSKLLLTQGQRAKTLLRRVVSRRRRRCELGLVSAMVSLLQQDKTLYGDLCPHVKLKLEATLENVS
Ga0209156_104237421	3300026547	Soil	MFALFAMALLVMTSLGSKLLLAQGHRAKDLLRRVVSRRRGRCELGLVSAMVSLLQRDKTLYNALCPHMKLKLEATLENVS
Ga0209689_12622471	3300027748	Soil	SRMFALFAMALLVMTSLGSKLLLTQGQRAKDLLRRVVSRRRSHGELGLVSAMVSLLQQDKTLYGELCPHVKLKLEATLGNVS
Ga0209814_104407431	3300027873	Populus Rhizosphere	MAHIKAWSRMFAVFARALLVMTSLGSKLLLTQGQRAKDLLRRVVSRRRGRCELGLVSAMVSLLQQDKTLYGALCPHVKLKLEATLGNVS
Ga0209481_100149853	3300027880	Populus Rhizosphere	MFALFAIALLVMTSLGSYLLLAQGHRAKVLLRRVGSRRRGRCELGLVSAMVKLLQQDKTLYDELSPHVKLKLEATLANVS
Ga0209488_110024902	3300027903	Vadose Zone Soil	LLTQGHRAKDLLRRVVSRRRGRCELGLVSAIVSLLQRDKTLYNDLCPHVKLKLEATLENV
Ga0268264_104802681	3300028381	Switchgrass Rhizosphere	MTSLGRKLLWAPGRRAKDWRRRVGARRRGRGALGLVSAMVSWLQQDQTLYNARCPHMKLKLAVTLENV
Ga0307276_100949211	3300028705	Soil	MFALFAIALLAMISLGCRLLLSPSRGAPGLLRRVASRRRRRCELGLVSAMVHLLRQDPTLYDKLSPHAKLKLEASLANVS
Ga0308189_102297431	3300031058	Soil	FRDAKWWLGFAKARIAQIKAWSRMFALFAIALLVMTSLGSQLLLAPSRGAPHLLRRVASRRRGRCELGLISAMVSLLKQDKTLYHKLCPHAKLRLEATLANVS
Ga0308204_100484312	3300031092	Soil	WLGFAKARIAHIKAWSRMFALFAMALLVMTSLGSKLLLTQGQRAKDLLRRVVSRRRRRCELGLVSAMVSLLQQDKTLYGELCPHVKLKLEATLGNVS
Ga0308204_103360902	3300031092	Soil	WLGFAKARIAHIKAWSRMFALFAMALLVMTSLGSKLLLTQGQRAKDLLRRVVSRRRGRCELGLVSAMVSLLQRDKTLYNDLCPHVKLKLEATLENVS
Ga0308197_100201663	3300031093	Soil	LGFAKARIAQIKAWSRMFALFAIALLVMTSLGSHLLLAQGQGAKALLRRVASRRRGRCELGLVSAMVKLLQQDKTLYDELSPHVKLKFHYRTNF
Ga0308199_11762031	3300031094	Soil	MAQIKAWSRMFALFAIALLVMTSLGSRLLLAQGQGAKALLRRVASRRRGRCELGLISAMVKLLQQDKTLYDELSPHVKLKLEA
Ga0308191_10107391	3300031098	Soil	AQIKAWSRMFALFAMALLVMTSLGSKLLLAQGQRAKDLLRRVVSRRRGRCELGLVSAMVSLLQRDKTLYNDLCPHVKLK
Ga0308191_10417481	3300031098	Soil	ARIAQIKAWSRMFALFAIALLVMTTLGSRLLLSSSRGAAALLRRVVSRRRGRCELSLVGAMVSLLRHDKTLYDALCPHHKLKLEATLANMS
Ga0308194_100162432	3300031421	Soil	FRDAKWWLGFAKARIAQIKAWSRMFALFAIALLVMTSLGSHLLLAQGQGAKALLRRVASRRRGRCELGLVSAMVKLLQQDKTLYDELSPHVKLKFHYRTNF
Ga0308179_10035931	3300031424	Soil	WSRMFALFAIALLVMTTLGSRLLLSSSRGAAALLRRVVSRRRGRCELSLVGAMVSLLRHDKTLYDALCPHHKLKLEATLANMS
Ga0318516_107483801	3300031543	Soil	LAKARMAQIKAWSRLFALCAMALLVMTSLGSTLLLTQGQRAKALLRRVGSRRRGRGALGLVSAMGSLLQQDKTLDGDLCPHVKLK
Ga0310887_104542341	3300031547	Soil	SLGSKLLLTQGHRAKDLLRRVVSRRRGRCELGLVSAMVSLLQGDKTLYNELSPHVKLKLEATLENVS
Ga0310915_101304073	3300031573	Soil	MAQIKAWSRLFALCAMALLVMTSLGSTLLLTQGQRAKALLRRVGSRRRGRGALGLVSAMGSLLQQDKTLDGDLCPHVKLK
Ga0318501_106266982	3300031736	Soil	LFAIALLAMISLGCRLLLSPSRGAPGLLRRVASRRRRRCELGLVSAMVHLLRQDQTLYDKLSPHAKLKLEASLANVS
Ga0318547_108902451	3300031781	Soil	AMALLVMTSLGSTLLLTQGQRAKALLRRVGSRRRGRGALGLVSAMGSLLQQDKTLDGDLCPHVKLK
Ga0318576_100076917	3300031796	Soil	MFALFAIALLVMTTLGSKLLLAQGHRAKDLLRRVMSRRRGRCELGLVSTMVSLLQRDKTLYNDLCPHVKLKLEATLENVS
Ga0310917_106186652	3300031833	Soil	TSLGSTLLLTQGQRAKALLRRVGSRRRGRGALGLVSAMGSLLQQDKTLDGDLCPHVKLK
Ga0310900_101255573	3300031908	Soil	LAKARIAQIKAWSRMFALFAIALLVMTSLGSKLLLTQGQRAKDLLRRVVSRRRSRCELGLVSAMVSLLQQDKTLYGELCPHVKLKLEATLGNVS
Ga0310900_105268881	3300031908	Soil	LFAIALLVMTTLGSKLILAQGPRAKVVLRRVVSRRRGRCELGLVSAMVSLLQRDKTLYNDLCPHLKLKLEATLENVS
Ga0310911_102181192	3300032035	Soil	LAKARMAQIKAWSRLFALCAMALLVMTSLGSTLLLTQGQRAKALLRRVGSRRRGRGALGLVSAMGSLLQQDKTLDGDLCP
Ga0310911_104823992	3300032035	Soil	GFRDAKWWLGFTKARIAHIKAWSRMFALFAMALLVMTSLGSKLLLTQGHRAKDLLHRVVSRRRSRCELGLVSAMVSLLQQDKTLYGELCPHVKLKLEATLGNVS
Ga0307415_1004892851	3300032126	Rhizosphere	MTSLGSKLLLAQGHRAKDWLRRVVSRRRGRCELGLVSAMVSLLQRDKTLYNDLCPHMKLKLEATLENVS
Ga0307472_1016008981	3300032205	Hardwood Forest Soil	LVRASLGSKLLLTQGQRATDLLRRVVSRRRRRCELGLVSAMVSLLQQDKTLYGELCPHVKLKLEATLGNVS
Ga0307472_1025985181	3300032205	Hardwood Forest Soil	RITQIKAWSRMFALFSIALLVMTSLGSRLLLAQGHRAKDLLRRVASRRRGRCELGLVSAMVRLLQQDKTLYDALSPHVKLKLEATLANVS
Ga0247830_103048142	3300033551	Soil	MFALFAMALLVMASLGSKLLLAQGPRAQDLLRRVVSRRRGRCELGLVSAMVSLLQGDKTLYNELCPHVKLKLEATLE
Ga0314786_131276_303_569	3300034664	Soil	AQIKAWARMFALFAIALLVMTTLGSKLLLAQGPRAKDLLRRVVSRRRGRCELGLVSAMISLLQRDKTLYNDLCPHLKLKLEATLENVS
Ga0314792_002984_2084_2311	3300034667	Soil	AMALLVLTSLGSKLLLAQGHRAKDLLRRVVSRRRGRCELGLVSAMVSLLQGDKTLYNELSPHVKLKLEATLENVS
Ga0370546_007404_776_1039	3300034681	Soil	MAQIKAWSRMFALFAIALLVMTSLGSRLLLAQGQGAKALLRRVASRRRGRCELGLVSAMVKLLQQDKTLYDELSPHVKLKFHYRTNF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052438

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences