Metagenome Family F052435

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052435
Family Type	Metagenome
Number of Sequences	142
Average Sequence Length	56 residues
Representative Sequence	MKKLLLAGIAALLLATGAAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGG
Number of Associated Samples	82
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	93.38 %
% of genes near scaffold ends (potentially truncated)	92.25 %
% of genes from short scaffolds (< 2000 bps)	85.92 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (73.944 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.099 % of family members)
Environment Ontology (ENVO)	Unclassified (57.042 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.085 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 31.82% β-sheet: 9.09% Coil/Unstructured: 59.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF08239	SH3_3	7.75
PF11295	DUF3096	3.52
PF00239	Resolvase	2.11
PF02796	HTH_7	2.11
PF13356	Arm-DNA-bind_3	0.70
PF01402	RHH_1	0.70
PF01068	DNA_ligase_A_M	0.70
PF05225	HTH_psq	0.70
PF00816	Histone_HNS	0.70
PF00589	Phage_integrase	0.70
PF13936	HTH_38	0.70
PF05968	Bacillus_PapR	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	2.11
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	2.11
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.70
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.70
COG2916	DNA-binding protein H-NS	Transcription [K]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.94 %
All Organisms	root	All Organisms	26.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.94 %
cellular organisms	root	All Organisms → cellular organisms	26.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.94 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	26.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.94 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.13 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.70 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.94 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.97 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	7.75 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.94 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	9.86 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.04 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.70 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.70 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	9.86 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.04 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.70 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.70 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459021\|G14TP7Y02HOCJK	Not Available	742	Open in IMG/M
3300000956\|JGI10216J12902_111487804	Not Available	956	Open in IMG/M
3300005181\|Ga0066678_10658504	Not Available	698	Open in IMG/M
3300005332\|Ga0066388_100573160	Not Available	1755	Open in IMG/M
3300005332\|Ga0066388_102921018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	873	Open in IMG/M
3300005332\|Ga0066388_103958668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	755	Open in IMG/M
3300005332\|Ga0066388_106495489	Not Available	589	Open in IMG/M
3300005332\|Ga0066388_107217457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	558	Open in IMG/M
3300005406\|Ga0070703_10438717	Not Available	576	Open in IMG/M
3300005559\|Ga0066700_11172691	Not Available	501	Open in IMG/M
3300005713\|Ga0066905_100653576	Not Available	897	Open in IMG/M
3300005713\|Ga0066905_100712280	Not Available	862	Open in IMG/M
3300005713\|Ga0066905_101485708	Not Available	616	Open in IMG/M
3300005713\|Ga0066905_101672506	Not Available	584	Open in IMG/M
3300005764\|Ga0066903_100412532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2230	Open in IMG/M
3300005764\|Ga0066903_100784697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1700	Open in IMG/M
3300005764\|Ga0066903_100785807	Not Available	1699	Open in IMG/M
3300005764\|Ga0066903_101782438	Not Available	1175	Open in IMG/M
3300005764\|Ga0066903_102040678	Not Available	1102	Open in IMG/M
3300005764\|Ga0066903_103341155	Not Available	866	Open in IMG/M
3300005764\|Ga0066903_103846976	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300005764\|Ga0066903_103847096	Not Available	806	Open in IMG/M
3300005764\|Ga0066903_104620413	Not Available	733	Open in IMG/M
3300005764\|Ga0066903_105288544	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300005764\|Ga0066903_105705937	Not Available	654	Open in IMG/M
3300006854\|Ga0075425_100746845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1122	Open in IMG/M
3300009792\|Ga0126374_10780612	Not Available	728	Open in IMG/M
3300010046\|Ga0126384_11527084	Not Available	626	Open in IMG/M
3300010046\|Ga0126384_11938711	Not Available	562	Open in IMG/M
3300010048\|Ga0126373_12997404	Not Available	526	Open in IMG/M
3300010323\|Ga0134086_10175701	Not Available	791	Open in IMG/M
3300010337\|Ga0134062_10266253	Not Available	802	Open in IMG/M
3300010358\|Ga0126370_10937598	Not Available	785	Open in IMG/M
3300010358\|Ga0126370_11239961	Not Available	695	Open in IMG/M
3300010358\|Ga0126370_11301026	Not Available	681	Open in IMG/M
3300010358\|Ga0126370_11418961	Not Available	656	Open in IMG/M
3300010358\|Ga0126370_12443943	Not Available	520	Open in IMG/M
3300010359\|Ga0126376_11247055	Not Available	761	Open in IMG/M
3300010360\|Ga0126372_10473315	Not Available	1168	Open in IMG/M
3300010360\|Ga0126372_10723728	Not Available	975	Open in IMG/M
3300010360\|Ga0126372_13278741	Not Available	503	Open in IMG/M
3300010361\|Ga0126378_10554745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1264	Open in IMG/M
3300010361\|Ga0126378_11379969	Not Available	798	Open in IMG/M
3300010361\|Ga0126378_13028774	Not Available	535	Open in IMG/M
3300010366\|Ga0126379_10052169	Not Available	3374	Open in IMG/M
3300010376\|Ga0126381_100949755	Not Available	1239	Open in IMG/M
3300010376\|Ga0126381_102119195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	809	Open in IMG/M
3300010376\|Ga0126381_102181935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	797	Open in IMG/M
3300010398\|Ga0126383_11358557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	800	Open in IMG/M
3300010398\|Ga0126383_12002594	Not Available	667	Open in IMG/M
3300012200\|Ga0137382_10568043	Not Available	809	Open in IMG/M
3300012948\|Ga0126375_11535776	Not Available	571	Open in IMG/M
3300012971\|Ga0126369_10139308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2264	Open in IMG/M
3300012971\|Ga0126369_11661833	Not Available	728	Open in IMG/M
3300014157\|Ga0134078_10654008	Not Available	510	Open in IMG/M
3300016270\|Ga0182036_10199471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1466	Open in IMG/M
3300016270\|Ga0182036_11782135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	521	Open in IMG/M
3300016294\|Ga0182041_11020858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	748	Open in IMG/M
3300016294\|Ga0182041_11773702	Not Available	572	Open in IMG/M
3300016294\|Ga0182041_12099246	Not Available	527	Open in IMG/M
3300016319\|Ga0182033_11488587	Not Available	611	Open in IMG/M
3300016341\|Ga0182035_10124371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1936	Open in IMG/M
3300016341\|Ga0182035_10695987	Not Available	885	Open in IMG/M
3300016341\|Ga0182035_10748597	Not Available	854	Open in IMG/M
3300016357\|Ga0182032_10667786	Not Available	870	Open in IMG/M
3300016357\|Ga0182032_11278147	Not Available	633	Open in IMG/M
3300016371\|Ga0182034_11286034	Not Available	638	Open in IMG/M
3300016387\|Ga0182040_10257237	Not Available	1315	Open in IMG/M
3300016387\|Ga0182040_10741398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	806	Open in IMG/M
3300016387\|Ga0182040_11501248	Not Available	572	Open in IMG/M
3300016404\|Ga0182037_10222048	Not Available	1479	Open in IMG/M
3300016422\|Ga0182039_10169316	Not Available	1713	Open in IMG/M
3300016422\|Ga0182039_10664525	Not Available	916	Open in IMG/M
3300016445\|Ga0182038_10238433	Not Available	1455	Open in IMG/M
3300021560\|Ga0126371_10566584	Not Available	1285	Open in IMG/M
3300021560\|Ga0126371_10657905	Not Available	1196	Open in IMG/M
3300021560\|Ga0126371_11426909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	822	Open in IMG/M
3300021560\|Ga0126371_11912128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	712	Open in IMG/M
3300021560\|Ga0126371_13476062	Not Available	532	Open in IMG/M
3300025928\|Ga0207700_11138591	Not Available	697	Open in IMG/M
3300031543\|Ga0318516_10552309	Not Available	659	Open in IMG/M
3300031545\|Ga0318541_10248571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	988	Open in IMG/M
3300031561\|Ga0318528_10031525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2608	Open in IMG/M
3300031564\|Ga0318573_10348695	Not Available	794	Open in IMG/M
3300031573\|Ga0310915_10030091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3384	Open in IMG/M
3300031573\|Ga0310915_10092182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2033	Open in IMG/M
3300031573\|Ga0310915_10127055	Not Available	1746	Open in IMG/M
3300031668\|Ga0318542_10172140	Not Available	1083	Open in IMG/M
3300031713\|Ga0318496_10396847	Not Available	762	Open in IMG/M
3300031719\|Ga0306917_10134713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1816	Open in IMG/M
3300031724\|Ga0318500_10329616	Not Available	751	Open in IMG/M
3300031744\|Ga0306918_10133850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1812	Open in IMG/M
3300031765\|Ga0318554_10414107	Not Available	765	Open in IMG/M
3300031765\|Ga0318554_10665149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	585	Open in IMG/M
3300031771\|Ga0318546_10502675	Not Available	851	Open in IMG/M
3300031778\|Ga0318498_10408269	Not Available	603	Open in IMG/M
3300031780\|Ga0318508_1041297	Not Available	1198	Open in IMG/M
3300031781\|Ga0318547_10840451	Not Available	572	Open in IMG/M
3300031782\|Ga0318552_10114308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1341	Open in IMG/M
3300031793\|Ga0318548_10027553	Not Available	2466	Open in IMG/M
3300031794\|Ga0318503_10324680	Not Available	500	Open in IMG/M
3300031797\|Ga0318550_10079861	Not Available	1518	Open in IMG/M
3300031799\|Ga0318565_10395908	Not Available	670	Open in IMG/M
3300031821\|Ga0318567_10361092	Not Available	821	Open in IMG/M
3300031835\|Ga0318517_10026904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2277	Open in IMG/M
3300031859\|Ga0318527_10258811	Not Available	740	Open in IMG/M
3300031860\|Ga0318495_10232670	Not Available	827	Open in IMG/M
3300031879\|Ga0306919_10810229	Not Available	719	Open in IMG/M
3300031890\|Ga0306925_10426242	Not Available	1420	Open in IMG/M
3300031894\|Ga0318522_10216667	Not Available	725	Open in IMG/M
3300031910\|Ga0306923_10806488	Not Available	1036	Open in IMG/M
3300031912\|Ga0306921_10048414	All Organisms → cellular organisms → Bacteria	4819	Open in IMG/M
3300031912\|Ga0306921_10223750	Not Available	2205	Open in IMG/M
3300031941\|Ga0310912_10671713	Not Available	804	Open in IMG/M
3300031941\|Ga0310912_10945965	Not Available	662	Open in IMG/M
3300031945\|Ga0310913_10079056	Not Available	2193	Open in IMG/M
3300031946\|Ga0310910_10517520	Not Available	947	Open in IMG/M
3300031946\|Ga0310910_11561914	Not Available	505	Open in IMG/M
3300031947\|Ga0310909_10419485	Not Available	1124	Open in IMG/M
3300031954\|Ga0306926_10041724	All Organisms → cellular organisms → Bacteria	5448	Open in IMG/M
3300032001\|Ga0306922_12326319	Not Available	513	Open in IMG/M
3300032035\|Ga0310911_10045520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2264	Open in IMG/M
3300032035\|Ga0310911_10299941	Not Available	924	Open in IMG/M
3300032039\|Ga0318559_10143810	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300032051\|Ga0318532_10165394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	786	Open in IMG/M
3300032052\|Ga0318506_10275990	Not Available	745	Open in IMG/M
3300032055\|Ga0318575_10362723	Not Available	735	Open in IMG/M
3300032059\|Ga0318533_10065275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2455	Open in IMG/M
3300032059\|Ga0318533_10657385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	769	Open in IMG/M
3300032059\|Ga0318533_10836806	Not Available	675	Open in IMG/M
3300032059\|Ga0318533_10910102	Not Available	645	Open in IMG/M
3300032076\|Ga0306924_10642025	Not Available	1198	Open in IMG/M
3300032091\|Ga0318577_10271539	Not Available	812	Open in IMG/M
3300032261\|Ga0306920_102011566	Not Available	809	Open in IMG/M
3300032261\|Ga0306920_103442023	Not Available	586	Open in IMG/M
3300033289\|Ga0310914_10249016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1596	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.59%
Host-Associated	Host-Associated	0.70%
Engineered	Engineered	0.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.59%
Plants	Host-Associated → Plants	0.70%
Solid Waste	Engineered → Solid Waste	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.70%
Grass	Engineered → Solid Waste → Grass	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.10%
Loam	Environmental → Terrestrial → Soil → Loam	15.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.70%
Composting	Engineered → Solid Waste → Grass → Composting	0.70%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	57.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.08%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.70%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	21.13%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	14.08%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.41%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.70%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459021	Litter degradation NP4	Engineered	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4NP_00235120	2170459021	Switchgrass, Maize And Mischanthus Litter	MKKLLLAGIAALLLATGAAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGG
JGI10216J12902_1114878041	3300000956	Soil	MKKALLTGIAVLFMATGTVHAAGRLPEAILGNWCWIEGG
Ga0066678_106585043	3300005181	Soil	MKKLLLPSIAALLLSTGAAHATERLPEAMLGNWCWVEGGDEQNWNQQIFARVPPEGCHGGDSLIRIDQKGIEGE
Ga0066388_1005731603	3300005332	Tropical Forest Soil	MASVAALFLATGAAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPP
Ga0066388_1029210182	3300005332	Tropical Forest Soil	MKSHTILAGIAVLFLATGTAHATVPLPEAMLGNWCWIEGGDEQNWNQQIFARPA*
Ga0066388_1039586681	3300005332	Tropical Forest Soil	MGVSSKVLLAGVAALLLATGAAHAADRLPEAMLGNWCWIEGGDEQN
Ga0066388_1064954891	3300005332	Tropical Forest Soil	MKKLLLAGVAALFLATGAAHANARLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGGDSL
Ga0066388_1072174571	3300005332	Tropical Forest Soil	MKIHILITGVAALFLAAGTANATTRLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGGDSLIR
Ga0070703_104387171	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLLLAGIAALLLSTGAAHATERLPEAMLGNWCWVEGGDEQNW
Ga0066700_111726912	3300005559	Soil	MKKLLLAGIAALLLSTGAAHATERLPEAMLGNWCWVEGGDEQNWNQQIFARVPPE
Ga0066905_1006535762	3300005713	Tropical Forest Soil	MKKLLLTSIAVLFIATGTAHATVPLPEAMLGNWCWIEGGDEQNWNQQIFA
Ga0066905_1007122801	3300005713	Tropical Forest Soil	MKRLLLTGIAALLLATGTAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGGDSLI
Ga0066905_1014857082	3300005713	Tropical Forest Soil	MKKLLLTGIAALLMATSAAHATVPLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGGDSLIR
Ga0066905_1016725061	3300005713	Tropical Forest Soil	MKKLLLASVAAPFLATGAAHADERLPEAMLGNWCWVEGGDEQN
Ga0066903_1004125321	3300005764	Tropical Forest Soil	MKKTLLTGITVLLLATGAAHATTRLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGGDSLIRI
Ga0066903_1007846975	3300005764	Tropical Forest Soil	MMTYQMKKALLTGIAALFLATGAAHATTRLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGC
Ga0066903_1007858073	3300005764	Tropical Forest Soil	MHGLRSVRQLLMASVAALFLATGAAHATERLPEAMLGNWCWIEGGDEQNWNQQI
Ga0066903_1017824383	3300005764	Tropical Forest Soil	MRPAILITGIAALFLIIGTAHATERLPEAMLGNWCWIEGGDEQNWSQQIFARVPPEGCHGGDSLIRIDQNG
Ga0066903_1020406781	3300005764	Tropical Forest Soil	MTHAKKLLLTGIAALFLATGAAHATVPLPEAMLGNWCWIEGGDEQNWNQQIFARV
Ga0066903_1033411553	3300005764	Tropical Forest Soil	MKKLLLTGIAALLLATGTAHATVPLPEAMLGNWCWIEGGDEQNWNQQ
Ga0066903_1038469761	3300005764	Tropical Forest Soil	MLRRISELLLASALFLAMGTAHATTRLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGGDSLI
Ga0066903_1038470961	3300005764	Tropical Forest Soil	MKKTLLTGIAALFLATGAAHATERLPEAMLGNWCWIEGGDEQNWNQQI
Ga0066903_1046204133	3300005764	Tropical Forest Soil	MKKLFLSGIAALFLSTGTAHATVPLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGG
Ga0066903_1052885441	3300005764	Tropical Forest Soil	MKKTLLAGVAALFLATGAAHATVPLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEG
Ga0066903_1057059371	3300005764	Tropical Forest Soil	MGDSSKVLLAGVAALFLATGTAHANAQLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGGDSL
Ga0075425_1007468454	3300006854	Populus Rhizosphere	MGDSSKVLLAGVAALLLASGTAYATERLPEAMLGNWCWVEGGDEQNWNQQIFARVPPEGCHGGDSLIRIDQ
Ga0126374_107806123	3300009792	Tropical Forest Soil	VKKLLIAGIAAPLMATSAAHATERLPEAMLGNWCWIEGGDEQNW
Ga0126384_115270843	3300010046	Tropical Forest Soil	MKKTLLTGVAVLFLATGTAHATTRLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGG
Ga0126384_119387111	3300010046	Tropical Forest Soil	MATILHREAATEMKKLLLPGIAALFLATGTAHATEHLPEAMLGNWCWVEGGDEQNWNQQIFARVPPEG
Ga0126373_129974041	3300010048	Tropical Forest Soil	MKKLLLVAALLMATSAAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEG
Ga0134086_101757013	3300010323	Grasslands Soil	MKKLLLAGIAALLLSTGAAHATERLPEAMLGNWCWVEGGDEQNWNQQIFARVPPEGCHGGDSLIRIDQ
Ga0134062_102662531	3300010337	Grasslands Soil	MKKLLLAGIAALLLSTGAAHATERLPEAMLGNWCWVEGGDEQNWNQQIFARVPPEGCHGGDSLIRIDQN
Ga0126370_109375981	3300010358	Tropical Forest Soil	MKKLLSAGIAVLLIATSTAHANDKLPEHMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGGDSLIRIDQKGIEGE
Ga0126370_112399611	3300010358	Tropical Forest Soil	MASVAALFLATGAAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGGDSLIRIDQNGI
Ga0126370_113010261	3300010358	Tropical Forest Soil	MKPLALITGVVMLLATGVAHATVPLPEAMLGDWCWIEGGDEQNWNQQIFARVP
Ga0126370_114189611	3300010358	Tropical Forest Soil	VKKLLIAGIAALLMATSAAHATERLPEAMLGNWCWIEGGDEQNWNQQIF
Ga0126370_124439432	3300010358	Tropical Forest Soil	MMKKALLVGVTALLWATGTAHATERLPEAMLGDWCWIEGGDEQNWNQQIFARV
Ga0126376_112470551	3300010359	Tropical Forest Soil	MKKLLLAGIAALLVSTGAAHATERLPEAMLGNWCWI
Ga0126372_104733151	3300010360	Tropical Forest Soil	VKKLLIAGIAALLMATSAAHATERLPEAMLGNWCWIEGGDEQNWNQQIFAR
Ga0126372_107237281	3300010360	Tropical Forest Soil	MASVAALFLATGAAHATERLPEAMLGNWCWIEGGDEQNWNQQIFAR
Ga0126372_132787411	3300010360	Tropical Forest Soil	MKKLLSAGIAALLIATSTAHANDKLPEHMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGGDSLI
Ga0126378_105547451	3300010361	Tropical Forest Soil	MMKKALLVGVTALLWATGTAHATERLPEAMLGDWCWIEGGDEQNWNQQIFARVPPEGCHG
Ga0126378_113799692	3300010361	Tropical Forest Soil	MLRRISELLLASALFLAMGTAHATTRLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGGDSL
Ga0126378_130287741	3300010361	Tropical Forest Soil	MKSHTILAGIAVLFLATGTAHATVPLPEAMLGNWCWIEGGDEQNWNQ
Ga0126379_1005216910	3300010366	Tropical Forest Soil	MRRVALAIAALLLATGTAHATVPLPEAMLGHWCWVEGGDEQNWNQQIFARVPPEGCHGGD
Ga0126381_1009497551	3300010376	Tropical Forest Soil	MKKLLLTGIAALLLATGTAHATVPLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGGDSLIRI
Ga0126381_1021191951	3300010376	Tropical Forest Soil	MKKLLLVAGIAALLLSTGAAHATERLPEAMLGNWCWIEGGDEQNWNQQIFAR
Ga0126381_1021819351	3300010376	Tropical Forest Soil	MKKLLLAGIAALLMATSAAHATEGLPEAMLGNWCWIEGGDAQNWNQQIFARVPPEGCHGGDSLIRIDQHGI
Ga0126383_113585571	3300010398	Tropical Forest Soil	MKKLLLVAGIAALLLSTGAAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGGDSLIRIDQNG
Ga0126383_120025942	3300010398	Tropical Forest Soil	MKKLLLTSIAVLFIATGTAHATVPLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGGDSLI
Ga0137382_105680432	3300012200	Vadose Zone Soil	MKKLLLPSIAALLLSTGAAHATERLPEAMLGNWCWVEGGDEQNWNQQIFARVPPEGCHGGDSLIRIDQ
Ga0126375_115357763	3300012948	Tropical Forest Soil	MRTKLLLTGVAALLLTTGAAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPP
Ga0126369_101393081	3300012971	Tropical Forest Soil	MKKLLLAGIAALLMATSAAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGGDSL
Ga0126369_116618331	3300012971	Tropical Forest Soil	MKKTLLTGIAALLLATGAARAPERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGGDSL
Ga0134078_106540081	3300014157	Grasslands Soil	MKKLLLAGIAALLLSTGAAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCH
Ga0182036_101994711	3300016270	Soil	MKKLFLTGIAALLLATGAAHATERLPEAMLGNWCWIEGGDEQNWNQQ
Ga0182036_117821352	3300016270	Soil	MKKLLLSGITALFLATGAAHATEHLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGG
Ga0182041_110208582	3300016294	Soil	MKKLLLSGITALFLATGAAHATEHLPEAMLGNWCWIEGGDEQNWNQQIFARV
Ga0182041_117737021	3300016294	Soil	VKKLLIAGIAALLMATSGAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGGDSLIRIDQ
Ga0182041_120992462	3300016294	Soil	MKKLLLTGVAALFLATGTTHATERLPEAVLGNWCWVEGGDEQNWNQQIFARVPPEGCHGGDSLIRIDQRVLKVRVAAHSAR
Ga0182033_114885871	3300016319	Soil	MKKALLIGIAALFLATGSAHATVPLPEAMLGNWCWIEGGDEQNWNQQIFARVPP
Ga0182035_101243716	3300016341	Soil	MSTRALISGIAALFLATGTAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHG
Ga0182035_106959874	3300016341	Soil	VKKLLIAGIAALLMATSGAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCH
Ga0182035_107485971	3300016341	Soil	MTMKKLLLTGIAVLFLATGTAHAADRLPEAMLGNWCWIEGG
Ga0182032_106677861	3300016357	Soil	VKKLLIAGIAALLMATSGAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHG
Ga0182032_112781471	3300016357	Soil	MKLLLTGIAALFLATGTALATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPRGVTVAT
Ga0182034_112860342	3300016371	Soil	MKKLLLTGIAALFLATGTAHATVPLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGGDSLI
Ga0182040_102572373	3300016387	Soil	MKKLLLTGITALLLATGTAHATERLPEAMLGNWCWIEGGDEQ
Ga0182040_107413982	3300016387	Soil	MKKLLLSGITALFLATGAAHATEHLPEAMLGNWCWIEGGDEQNWNQQ
Ga0182040_115012481	3300016387	Soil	MRTAFLTGIAALFLATGTAHATVPLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGGDS
Ga0182037_102220483	3300016404	Soil	MKKTLLTGITALLLATGTAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPP
Ga0182039_101693161	3300016422	Soil	MKKALLIGIAALFLATGSAHATVPLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGGDSLI
Ga0182039_106645251	3300016422	Soil	MKTSTFIAGIAALFLATGAAHATVPLPEAMLGNWCWIEGGDERNWNQQIFARVP
Ga0182038_102384333	3300016445	Soil	MKTLLLTSVAALFLATGTAHADAQLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGGDSL
Ga0182038_107742091	3300016445	Soil	MKKLLLTGVAALFLATGAANATVQLPDTITGNWCWIEGGDEQNWNQQIFARVP
Ga0126371_105665841	3300021560	Tropical Forest Soil	MARPPWREARMMKKALLVGVTALLWATGTAHATERLPEAMLGDWCWIEGGDEQNWNQQIFARVPPEGCHGGDSLIRI
Ga0126371_106579052	3300021560	Tropical Forest Soil	MHGLRSVRQLLMASVAALFLATGAAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGGDS
Ga0126371_114269091	3300021560	Tropical Forest Soil	MKKLLLSSIAALFLATGAAHADARLPEAMLGNWCWIEGGDEQNWNQQIFA
Ga0126371_119121281	3300021560	Tropical Forest Soil	MKKLLLAGIAALLVSTGAAHATERLPEAMLGNWCWIEGGDEQNWNQQIF
Ga0126371_134760622	3300021560	Tropical Forest Soil	MTHAKKLLLTGIAALFLATGAAHATERLPEAMLGNWGWIEGGDEQNWNQQIFARVPPEGCHGGD
Ga0207700_111385913	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLLLAGIAALLLATGAAHATERLPEAMLGNWCWIEGGDECHGG
Ga0318516_105523092	3300031543	Soil	MKKTLLTGITALLLATGTAHATERLPEAMLGNWCWIEGGDEQNWNQQIFA
Ga0318541_102485711	3300031545	Soil	MKKLFLTGIAALLLATGAAHATGRLPEAMLGNWCWIEGGDEQNWNQQIFARVPPPGGVTVATV
Ga0318528_100315251	3300031561	Soil	VKKLLIAGIAALLMATSGAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPPGGVTVATV
Ga0318573_103486951	3300031564	Soil	MRALLLTSIATLFLATGAAHAIERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGWHGGDSLIRID
Ga0310915_100300919	3300031573	Soil	MSTRALISGIAALFLATGTAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARV
Ga0310915_100921821	3300031573	Soil	MKKLFLTGIAALLLATGAAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPPGGVTVATV
Ga0310915_101270551	3300031573	Soil	MKKTLLTGITALLLATGTAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPGGCHGGDSLIRI
Ga0318542_101721401	3300031668	Soil	MKKTLLTGITALLLATGTAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPWRKL
Ga0318496_103968471	3300031713	Soil	MKTSTFIAGIAALFLATGAAHATVPLPEAMLGNWCWIEGGDERNWNQQIFARVPPEG
Ga0306917_101347135	3300031719	Soil	MKKLFLTGIAALLLATGAAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPPGG
Ga0318500_103296161	3300031724	Soil	MKTSTFIAGIAALFLATGAAHATVPLPEAMLGNWCWIEGGDERNWNQQI
Ga0306918_101338501	3300031744	Soil	MKKLFLTGIAALLLATGAAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPP
Ga0318554_104141073	3300031765	Soil	MRALLLTSIATLFLATGAAHAIERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGWH
Ga0318554_106651493	3300031765	Soil	MKKLFLTGIAALLLATGAAHATGRLPEAMLGNWCWIEGGDEQNWNQQIFARVPP
Ga0318546_105026752	3300031771	Soil	MKTSTFIAGIAALFLATGAAHATVPLPEAMLGNWCWIEGGDERNWNQQIFA
Ga0318498_104082691	3300031778	Soil	MKTSTFIAGIAALFLATGAAHATVPLPEAMLGNWCWIEGGDERNWNQQIFARVPPEGCHGGDSLIR
Ga0318508_10412971	3300031780	Soil	VKKLLIAGIAALLMATSGAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGC
Ga0318547_108404511	3300031781	Soil	MKKLLLPGVAALFLATGTAHADGRLPEAILGNWCWIEGGDEQNWNQQIFARVPPEGCHGGDSLIRIDQDG
Ga0318552_101143081	3300031782	Soil	MKKLFLTGIAALLLATGAAHATERLPEAMLGNWCWIEGGDEQNWNQQI
Ga0318548_100275536	3300031793	Soil	MKKTLLTGITALLLATGTAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARV
Ga0318548_102274741	3300031793	Soil	VKKLLIAGIAALLMATSGAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGGDSLIRIDQNVI
Ga0318503_103246802	3300031794	Soil	MRALLLTSIATLFLATGAAHAIERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGWHGG
Ga0318550_100798615	3300031797	Soil	VKKLLIAGIAALLMATSGAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPWRKL
Ga0318550_102508771	3300031797	Soil	MKKLFLTGIAALLLATGAAHATGRLPEAMLGNWCWIE
Ga0318565_103959081	3300031799	Soil	VKKLLIAGIAALLMATSGAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGG
Ga0318567_103610924	3300031821	Soil	VKKLLIAGIAALLMATSGAHATERLPEAMLGNWCWIEG
Ga0318517_100269046	3300031835	Soil	MKKLFLTGIAALLLATGAAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVP
Ga0318527_102588112	3300031859	Soil	MKKTLITVSLLLATGAAHATERLPEAMLGNWCWIEGGNEQNW
Ga0318495_102326701	3300031860	Soil	MKKTLLTGITALLLATGTAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHG
Ga0306919_108102292	3300031879	Soil	MKKLLLTGITALLLATGTAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPWRKL
Ga0306925_104262421	3300031890	Soil	MKKTLLTGITALLLATGTAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVP
Ga0306925_106283961	3300031890	Soil	MKKLLLTGVAALFLATGAANATVQLPDTITENWCWIEGGDEQNWNQ
Ga0318522_102166671	3300031894	Soil	MRALLLTSIATLFLATGAAHAIERLPEAMLGNWCWIEGGDEQNWN
Ga0306923_108064881	3300031910	Soil	MKKLLLTGVAALFLATGTTHATERLPEAVLGNWCWVEGGDEQNWNQQIFARVPPEGCHGGDSLIRID
Ga0306921_1004841410	3300031912	Soil	MSTRALISGIAALFLATGTAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEG
Ga0306921_102237501	3300031912	Soil	MKKTLLTGITALLLATGTAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPGGCHG
Ga0310912_103590814	3300031941	Soil	MKKLLLTGVAALFLATGAANATVQLPDTITGNWCWIEGGDEQNWNQQIFARVLPEGC
Ga0310912_106717133	3300031941	Soil	MKKLLLTGVAALFLATGTTHATERLPEAVLGNWCWVEGGDEQNWNQQI
Ga0310912_109459651	3300031941	Soil	MKRLFLTAITALLMAASAAHATERLPEAMLGNWCWVEGGDEQNWNQQIFARVPPEGCHRG
Ga0310913_100790566	3300031945	Soil	MKKLLLTGITALLLATGTAHATERLPEAMLGNWCWIEGGDEQNWNQ
Ga0310910_105175204	3300031946	Soil	MKLLLTGIAALFLATGTAHATERLPEAMLGNWCWIEGGDEQNWNQ
Ga0310910_115619141	3300031946	Soil	MALLIGIAALFLATGTAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGC
Ga0310909_104194853	3300031947	Soil	MKKLLLTGVAALFLATGTTHATERLPEAVLGNWCWVEGGDEQNWNQQIFARVP
Ga0306926_100417241	3300031954	Soil	MKKTLITVSLLLATGAAHATERLPEAMLGNWCWIEGGNEQNWNQQI
Ga0306922_123263192	3300032001	Soil	MKKLLLTGVAALFLATGTTHATERLPEAVLGNWCWVEGGDEQNWNQQIFARVPPEGCHGGDS
Ga0310911_100455201	3300032035	Soil	MKTLLPAIAALLLATGTAHADAQLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGGDSLIRIDQNGSE
Ga0310911_102999414	3300032035	Soil	VKKLLIAGIAALLMATSGAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARV
Ga0318559_101438101	3300032039	Soil	MKKTLITVSLLLATGAAHATERLPEARLGNWCWIEGGNEQN
Ga0318532_101653943	3300032051	Soil	MKKLFLTGIAALLLVTGAAHATERLPEAMLGNWCWIEGG
Ga0318506_102759901	3300032052	Soil	MKTSTFIAGIAALFLATGAAHATVPLPEAMLGNWCWIEGGDERNWNQQ
Ga0318575_103627231	3300032055	Soil	MKKTLLTGITALLLATGTAHATERLPEAMLGNWCWIEGGDEQN
Ga0318533_100652758	3300032059	Soil	VAEAKLKKTLLTGIAALFLATGTAHAIERLPEAMLGNWCWIEGVDEQDWNQQIFARVP
Ga0318533_106573853	3300032059	Soil	MKKLFLTGIAALLLATGAAHATERLPEAMLGNWCWIEGGDEQNWNQHIF
Ga0318533_108368063	3300032059	Soil	MTKTLLTGIAALFLATGAAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCH
Ga0318533_109101023	3300032059	Soil	MSTRALISGIAALFLATGTAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCH
Ga0306924_106420254	3300032076	Soil	MSTRALISGIAALFLATGTAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGGD
Ga0318577_102715391	3300032091	Soil	MKKTLLTGITALLLATGTAHATERLPEAMLGNWCWIEGGDEQNWNQQIFARVPWRKF
Ga0306920_1002837561	3300032261	Soil	MSTRALISGIAALFLATGTAHATERLPEAMLGNWCWIEGGDEQ
Ga0306920_1020115662	3300032261	Soil	MKKLLLTGIAALFLATGTAHATVPLPEAMLGNWCWIEGGDEQNWNQQIFARVPPE
Ga0306920_1034420231	3300032261	Soil	KMKKTPITVSLLLATGAAHATERLPEAMLGNWCWIEGGNEQNWN
Ga0310914_102490164	3300033289	Soil	MKTLLLTSVAALFLATGTAHADAQLPEAMLGNWCWIEGGDEQNWNQQIFARVPPEGCHGGDSLIRIDQNGSE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F052435

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences