Metagenome Family F052347

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052347
Family Type	Metagenome
Number of Sequences	142
Average Sequence Length	51 residues
Representative Sequence	VPVCLVVAGGSLVIGIRGRLIPQRHCTWKYVVVVGGSLVMWASFLHPAVLG
Number of Associated Samples	74
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	22.14 %
% of genes near scaffold ends (potentially truncated)	77.46 %
% of genes from short scaffolds (< 2000 bps)	97.89 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (99.296 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere (87.324 % of family members)
Environment Ontology (ENVO)	Unclassified (89.437 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (89.437 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 37.97% Coil/Unstructured: 62.03%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF04195	Transposase_28	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
All Organisms	root	All Organisms	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
cellular organisms	root	All Organisms → cellular organisms	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Liliopsida	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Petrosaviidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
commelinids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Poales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Poaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
PACMAD clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Panicoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Panicodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Paniceae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Panicinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Panicum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Panicum sect. Hiantes	section	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.30 %
Panicum virgatum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005338\|Ga0068868_102362749	Not Available	507	Open in IMG/M
3300005356\|Ga0070674_101693866	Not Available	572	Open in IMG/M
3300005718\|Ga0068866_10017793	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	3202	Open in IMG/M
3300005718\|Ga0068866_10207380	Not Available	1174	Open in IMG/M
3300005718\|Ga0068866_10671607	Not Available	708	Open in IMG/M
3300005718\|Ga0068866_11355369	Not Available	518	Open in IMG/M
3300005840\|Ga0068870_11161236	Not Available	557	Open in IMG/M
3300009148\|Ga0105243_11388917	Not Available	722	Open in IMG/M
3300009176\|Ga0105242_11712865	Not Available	665	Open in IMG/M
3300014745\|Ga0157377_10632305	Not Available	768	Open in IMG/M
3300014745\|Ga0157377_10878971	Not Available	668	Open in IMG/M
3300015267\|Ga0182122_1014610	Not Available	777	Open in IMG/M
3300015268\|Ga0182154_1024381	Not Available	682	Open in IMG/M
3300015268\|Ga0182154_1039236	Not Available	602	Open in IMG/M
3300015268\|Ga0182154_1040660	Not Available	596	Open in IMG/M
3300015268\|Ga0182154_1068397	Not Available	514	Open in IMG/M
3300015269\|Ga0182113_1030411	Not Available	712	Open in IMG/M
3300015274\|Ga0182188_1012069	Not Available	767	Open in IMG/M
3300015276\|Ga0182170_1048889	Not Available	576	Open in IMG/M
3300015276\|Ga0182170_1069593	Not Available	520	Open in IMG/M
3300015277\|Ga0182128_1031725	Not Available	655	Open in IMG/M
3300015279\|Ga0182174_1055189	Not Available	575	Open in IMG/M
3300015282\|Ga0182124_1067201	Not Available	535	Open in IMG/M
3300015283\|Ga0182156_1082236	Not Available	513	Open in IMG/M
3300015285\|Ga0182186_1046630	Not Available	598	Open in IMG/M
3300015285\|Ga0182186_1064523	Not Available	542	Open in IMG/M
3300015286\|Ga0182176_1021516	Not Available	774	Open in IMG/M
3300015286\|Ga0182176_1035198	Not Available	665	Open in IMG/M
3300015287\|Ga0182171_1018550	Not Available	782	Open in IMG/M
3300015288\|Ga0182173_1042996	Not Available	617	Open in IMG/M
3300015288\|Ga0182173_1047106	Not Available	601	Open in IMG/M
3300015291\|Ga0182125_1017297	Not Available	817	Open in IMG/M
3300015291\|Ga0182125_1088440	Not Available	513	Open in IMG/M
3300015292\|Ga0182141_1019903	Not Available	784	Open in IMG/M
3300015294\|Ga0182126_1014511	Not Available	863	Open in IMG/M
3300015294\|Ga0182126_1018768	Not Available	804	Open in IMG/M
3300015294\|Ga0182126_1042269	Not Available	641	Open in IMG/M
3300015294\|Ga0182126_1064769	Not Available	566	Open in IMG/M
3300015295\|Ga0182175_1044841	Not Available	637	Open in IMG/M
3300015296\|Ga0182157_1014325	Not Available	891	Open in IMG/M
3300015296\|Ga0182157_1029620	Not Available	726	Open in IMG/M
3300015296\|Ga0182157_1082893	Not Available	538	Open in IMG/M
3300015296\|Ga0182157_1098826	Not Available	509	Open in IMG/M
3300015298\|Ga0182106_1065471	Not Available	579	Open in IMG/M
3300015298\|Ga0182106_1081994	Not Available	540	Open in IMG/M
3300015298\|Ga0182106_1099528	Not Available	507	Open in IMG/M
3300015303\|Ga0182123_1082159	Not Available	532	Open in IMG/M
3300015304\|Ga0182112_1087235	Not Available	534	Open in IMG/M
3300015305\|Ga0182158_1015104	Not Available	876	Open in IMG/M
3300015307\|Ga0182144_1058339	Not Available	608	Open in IMG/M
3300015308\|Ga0182142_1112496	Not Available	507	Open in IMG/M
3300015308\|Ga0182142_1113123	Not Available	506	Open in IMG/M
3300015313\|Ga0182164_1101752	Not Available	566	Open in IMG/M
3300015314\|Ga0182140_1055370	Not Available	632	Open in IMG/M
3300015314\|Ga0182140_1067403	Not Available	596	Open in IMG/M
3300015321\|Ga0182127_1083543	Not Available	572	Open in IMG/M
3300015322\|Ga0182110_1040567	Not Available	709	Open in IMG/M
3300015322\|Ga0182110_1080033	Not Available	579	Open in IMG/M
3300015323\|Ga0182129_1112678	Not Available	507	Open in IMG/M
3300015341\|Ga0182187_1063447	Not Available	755	Open in IMG/M
3300015341\|Ga0182187_1107148	Not Available	630	Open in IMG/M
3300015341\|Ga0182187_1167840	Not Available	537	Open in IMG/M
3300015342\|Ga0182109_1117051	Not Available	642	Open in IMG/M
3300015342\|Ga0182109_1201220	Not Available	523	Open in IMG/M
3300015343\|Ga0182155_1057755	Not Available	816	Open in IMG/M
3300015343\|Ga0182155_1219252	Not Available	507	Open in IMG/M
3300015344\|Ga0182189_1189712	Not Available	541	Open in IMG/M
3300015344\|Ga0182189_1223946	Not Available	506	Open in IMG/M
3300015345\|Ga0182111_1204984	Not Available	539	Open in IMG/M
3300015345\|Ga0182111_1227249	Not Available	517	Open in IMG/M
3300015346\|Ga0182139_1204799	Not Available	540	Open in IMG/M
3300015347\|Ga0182177_1058328	Not Available	867	Open in IMG/M
3300015347\|Ga0182177_1153946	Not Available	606	Open in IMG/M
3300015347\|Ga0182177_1218817	Not Available	529	Open in IMG/M
3300015351\|Ga0182161_1046793	Not Available	982	Open in IMG/M
3300015351\|Ga0182161_1236435	Not Available	528	Open in IMG/M
3300015355\|Ga0182159_1108205	Not Available	831	Open in IMG/M
3300015355\|Ga0182159_1276414	Not Available	558	Open in IMG/M
3300015361\|Ga0182145_1083605	Not Available	668	Open in IMG/M
3300017404\|Ga0182203_1086826	Not Available	619	Open in IMG/M
3300017404\|Ga0182203_1109613	Not Available	575	Open in IMG/M
3300017404\|Ga0182203_1160824	Not Available	505	Open in IMG/M
3300017407\|Ga0182220_1013719	Not Available	881	Open in IMG/M
3300017407\|Ga0182220_1032352	Not Available	702	Open in IMG/M
3300017409\|Ga0182204_1034108	Not Available	733	Open in IMG/M
3300017410\|Ga0182207_1035072	Not Available	852	Open in IMG/M
3300017410\|Ga0182207_1089615	Not Available	633	Open in IMG/M
3300017410\|Ga0182207_1123968	Not Available	568	Open in IMG/M
3300017410\|Ga0182207_1143520	Not Available	540	Open in IMG/M
3300017411\|Ga0182208_1024683	Not Available	829	Open in IMG/M
3300017411\|Ga0182208_1026862	Not Available	809	Open in IMG/M
3300017411\|Ga0182208_1056656	Not Available	650	Open in IMG/M
3300017411\|Ga0182208_1125129	Not Available	508	Open in IMG/M
3300017413\|Ga0182222_1108464	Not Available	501	Open in IMG/M
3300017415\|Ga0182202_1113629	Not Available	538	Open in IMG/M
3300017415\|Ga0182202_1121564	Not Available	525	Open in IMG/M
3300017415\|Ga0182202_1139582	Not Available	502	Open in IMG/M
3300017417\|Ga0182230_1073593	Not Available	613	Open in IMG/M
3300017417\|Ga0182230_1082113	Not Available	584	Open in IMG/M
3300017420\|Ga0182228_1065482	Not Available	644	Open in IMG/M
3300017420\|Ga0182228_1083883	Not Available	588	Open in IMG/M
3300017425\|Ga0182224_1030688	Not Available	849	Open in IMG/M
3300017425\|Ga0182224_1042200	Not Available	773	Open in IMG/M
3300017425\|Ga0182224_1052994	Not Available	721	Open in IMG/M
3300017425\|Ga0182224_1062913	Not Available	684	Open in IMG/M
3300017425\|Ga0182224_1128297	Not Available	547	Open in IMG/M
3300017427\|Ga0182190_1011084	Not Available	1220	Open in IMG/M
3300017427\|Ga0182190_1023223	Not Available	967	Open in IMG/M
3300017427\|Ga0182190_1115974	Not Available	568	Open in IMG/M
3300017430\|Ga0182192_1088601	Not Available	635	Open in IMG/M
3300017430\|Ga0182192_1156246	Not Available	521	Open in IMG/M
3300017433\|Ga0182206_1069536	Not Available	655	Open in IMG/M
3300017433\|Ga0182206_1157453	Not Available	504	Open in IMG/M
3300017436\|Ga0182209_1024331	Not Available	928	Open in IMG/M
3300017436\|Ga0182209_1065878	Not Available	686	Open in IMG/M
3300017436\|Ga0182209_1105921	Not Available	591	Open in IMG/M
3300017436\|Ga0182209_1106506	Not Available	590	Open in IMG/M
3300017436\|Ga0182209_1167267	Not Available	508	Open in IMG/M
3300017442\|Ga0182221_1025012	Not Available	900	Open in IMG/M
3300017442\|Ga0182221_1162354	Not Available	510	Open in IMG/M
3300017443\|Ga0182193_1026212	Not Available	974	Open in IMG/M
3300017443\|Ga0182193_1127511	Not Available	586	Open in IMG/M
3300017680\|Ga0182233_1054224	Not Available	709	Open in IMG/M
3300017680\|Ga0182233_1056082	Not Available	698	Open in IMG/M
3300017680\|Ga0182233_1092212	Not Available	556	Open in IMG/M
3300017682\|Ga0182229_1042769	Not Available	770	Open in IMG/M
3300017684\|Ga0182225_1023169	Not Available	888	Open in IMG/M
3300017685\|Ga0182227_1090286	Not Available	587	Open in IMG/M
3300017685\|Ga0182227_1103804	Not Available	556	Open in IMG/M
3300017685\|Ga0182227_1114447	Not Available	536	Open in IMG/M
3300017686\|Ga0182205_1111938	Not Available	582	Open in IMG/M
3300017686\|Ga0182205_1128593	Not Available	555	Open in IMG/M
3300017689\|Ga0182231_1092957	Not Available	579	Open in IMG/M
3300017690\|Ga0182223_1060859	Not Available	614	Open in IMG/M
3300021060\|Ga0182232_1056279	Not Available	649	Open in IMG/M
3300021060\|Ga0182232_1082584	Not Available	522	Open in IMG/M
3300025907\|Ga0207645_10313180	Not Available	1046	Open in IMG/M
3300025908\|Ga0207643_10997103	Not Available	542	Open in IMG/M
3300025926\|Ga0207659_10812888	Not Available	803	Open in IMG/M
3300026089\|Ga0207648_11729432	Not Available	587	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	89.44%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.93%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	89.44%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.11%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	89.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.11%

Habitat	Taxonomy	Distribution
Miscanthus Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere	87.32%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.11%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.41%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.41%
Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere	1.41%
Switchgrass Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015267	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015268	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015269	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015274	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015276	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015277	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015279	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015282	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015283	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015285	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015286	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015287	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015288	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015291	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015292	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015294	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015295	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015296	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015298	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015303	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015304	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015305	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015307	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015308	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015313	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015314	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015321	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015322	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015323	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015341	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015342	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015343	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015344	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015345	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015346	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015347	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015351	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015355	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015361	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300017404	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017407	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017409	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017410	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017411	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017413	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017415	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017417	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017420	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017425	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017427	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017430	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017433	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017436	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017442	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017443	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017680	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017682	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017684	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017685	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017686	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017689	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017690	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300021060	Phyllosphere microbial comminities from miscanthus, Michigan, USA - G6R3_NF_07NOV2016_LD2 MG	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0068868_1023627491	3300005338	Miscanthus Rhizosphere	YFVVPVCLVVAGGSLVIGIRGRLIPRQHCARMYVVVVGGSLVMWASFLHPAVLG*
Ga0070674_1016938661	3300005356	Miscanthus Rhizosphere	VPVCLVVAGGSLVIGIRGRLILRQHYARMYVVVVGGSLVMWASFLHLAVLG*
Ga0068866_100177935	3300005718	Miscanthus Rhizosphere	VAGGSLVIGIRGRLIPRQHCARMYVVVVGGSLVMWASFLHPAVLG*
Ga0068866_102073803	3300005718	Miscanthus Rhizosphere	VAGGSLVIGIRGRLIPRQHCARMYVVVVGGSLVMWASFLHLAVLG*
Ga0068866_106716071	3300005718	Miscanthus Rhizosphere	VIEIRGRLISQRHCTRRYVVVVGGSLVMWDTFLHPAVLG
Ga0068866_113553691	3300005718	Miscanthus Rhizosphere	VVAGGSLVIGIRGRLIPRQHCARMYVVVVGGSLVMWASFLHLAVLG*
Ga0068870_111612361	3300005840	Miscanthus Rhizosphere	AGGSLVIGIRGRLIPRQHCARMYVVVVGGSLVMWASFLHLAVLG*
Ga0105243_113889171	3300009148	Miscanthus Rhizosphere	LVYLVVARGSLVMGIRGRLIPQQHCTWKYVAVVGWSLVMWDAILHLVVLG*
Ga0105242_117128652	3300009176	Miscanthus Rhizosphere	VYLVVPVCLVVAGGSLVIGIRGRLIPQRFRTWKHVAVVGGSLVMWDAFLHPAVLG*
Ga0157377_106323051	3300014745	Miscanthus Rhizosphere	IPGGSLVIGIRGRLIPQQHCTWKYVVVVGGSLVMWASFLHPAVLG*
Ga0157377_108789711	3300014745	Miscanthus Rhizosphere	VYLVVAGGSLVIGIRGRLISQRDCTRKYVVVVGGSLVMWDTFLHPAVLG*
Ga0182122_10146101	3300015267	Miscanthus Phyllosphere	LVVAGGSLVIGVRGRLIPQWRCIRKLVAVVGGSLVMWASSLHPAVLG*
Ga0182154_10243812	3300015268	Miscanthus Phyllosphere	VYLVVAGGSLVIGIGGRLIPQRQCTGKYVEVVGGSLVMWDTFL
Ga0182154_10392361	3300015268	Miscanthus Phyllosphere	VYFVVLVHLVVAGGGLVIGIRGRIIPQWHCSRKYVAVARGSLVMWDAFLHPAVLG*
Ga0182154_10406601	3300015268	Miscanthus Phyllosphere	VYFIVLAYLAIAGGSLVIGIRGRLIPQQHHTWKYVAVVGGSLVMWDAILHLAVLG*
Ga0182154_10683971	3300015268	Miscanthus Phyllosphere	YFVVPVCLVVAGGSLVIGIRGRLIPRQHCARMYVVVVGGSLVMWALFLHPAVLG*
Ga0182113_10304111	3300015269	Miscanthus Phyllosphere	VYFAILVCLAVAGGSLVIGIRGRLIPQQHCTWKYVAVVGGSLVIWGAILHLAVLG*
Ga0182188_10120692	3300015274	Miscanthus Phyllosphere	VIGIRGRLIPRQHCARMYVVVVGGSLVMWASFLHL
Ga0182170_10488891	3300015276	Miscanthus Phyllosphere	VYFAVLVSLVVAGGSLVIGIRGRLIPQRHCTGKYVVVVGGSLMMWDVFLHPAVLG*
Ga0182170_10695931	3300015276	Miscanthus Phyllosphere	VCFVVPVCLVIAGGSLVIGIRGRLIPQQHCTRMYVAVVGGSLVMWASFLHLAVLG*
Ga0182128_10317252	3300015277	Miscanthus Phyllosphere	LVHLVVAGGSLVIGIRGRLILQQHCTWKYVVVVGGSLVMWDTFLHPAVLG*
Ga0182174_10551892	3300015279	Miscanthus Phyllosphere	RACFVVPVCLVVAGGSLVIGIRGRLIPRQHCARMYVVVVGGSLVMWASFLHLAVLG*
Ga0182124_10672011	3300015282	Miscanthus Phyllosphere	AYLVAPVCLVVAGGSLGIGIRGGLIPHWHCTWKYVVVVGGSLVMWDTFLHPAVLG*
Ga0182156_10822361	3300015283	Miscanthus Phyllosphere	CFVVAGGSLVIGIRGRLIPRQHCARMYVVVVGGSLVMWASFLHLAVLG*
Ga0182186_10466301	3300015285	Miscanthus Phyllosphere	FVVLVYLVVAGGSLVIWIRGRLILQRHCTRKYVAVVRGSLVMWDTFPHPAVLG*
Ga0182186_10645232	3300015285	Miscanthus Phyllosphere	AYFVVPVHLVVAGGSLVIGIRGRLIPQWFHTWKYMAVVGGSLMMWDAFLHPAVLG*
Ga0182176_10215161	3300015286	Miscanthus Phyllosphere	VIGIRGRLIPQQQCTRIYVVVVGGSLVMWASLLHLAV
Ga0182176_10351981	3300015286	Miscanthus Phyllosphere	VIGIRGRLIPQQHCTRMYVAVVGGSLVMWTLFLHLTV
Ga0182171_10185501	3300015287	Miscanthus Phyllosphere	LRAYFVVPVHLIVAGGSLVIGIRGRLIPQWHCSGKYVAVARGSLVMWDMFLHPAVLG*
Ga0182173_10429962	3300015288	Miscanthus Phyllosphere	LVHFVVDEGSLVIGIRGRLIPQRHCTWKYMVVVGGSLVMWASFLHPAVLG*
Ga0182173_10471062	3300015288	Miscanthus Phyllosphere	VVLVHFVVAGGSLVIGIRGRLIPQRHCTWKYMVVVGGSLVMWASFLHPAVLG*
Ga0182125_10172971	3300015291	Miscanthus Phyllosphere	SSPRAYFVVLVHLVVAGGSLVIGIRGRLIPQRHCIRKYVAVAGGSLVMWDTSLHPAVPG*
Ga0182125_10884402	3300015291	Miscanthus Phyllosphere	PACLVIVGGSLVIGIRGRLIPYQQCTRMYVAVVGGSLVMWASFLHLAVLG*
Ga0182141_10199031	3300015292	Miscanthus Phyllosphere	VIGIRGRLIPQWYCTWKYAAVVGGSLVMWDAFLHLAVLG
Ga0182126_10145111	3300015294	Miscanthus Phyllosphere	YLVVAGGSLVIGIRGRLIPQQQCTRMYVAVVGGSLVMWALFLHLAVLG*
Ga0182126_10187681	3300015294	Miscanthus Phyllosphere	AYFAVLVCLAVAGGSLVIGIKGRLIPQQQCTRMYVAVVGGSLVMWSSFLHLAVLG*
Ga0182126_10422691	3300015294	Miscanthus Phyllosphere	VYFIVLVYLVVAGGSLVIGIRGRLISQRHCTRRYVAVVGGSLVMWDMFLHPAVLG*
Ga0182126_10647691	3300015294	Miscanthus Phyllosphere	FVVLVHLIVARGSLVIGIRGRLILQWHCSGKYVAVVGGSLVMWDTFLHPAVLG*
Ga0182175_10448412	3300015295	Miscanthus Phyllosphere	MIVSEVEQPRVYLVVLVYLVIARGSLVIEIRGRLISQQHCTRRYVAVVGGSLMMWDTFLHPAVLG*
Ga0182157_10143252	3300015296	Miscanthus Phyllosphere	SLVIGIRGRLIPRQHCARMYVVVVGGSLVMWASFLHLAVLG*
Ga0182157_10296201	3300015296	Miscanthus Phyllosphere	AYSIALVHLVVLGGSIVIWIRGRLISQWHRSGKYVATVGGSLVMWDAFLHPTVLG*
Ga0182157_10828931	3300015296	Miscanthus Phyllosphere	VIGIRGRLIPQRHCTRKYVVEVGGNLVMRDTFLHPAA
Ga0182157_10988261	3300015296	Miscanthus Phyllosphere	VYFVVLVHLVVAGGSLVIGIRGRLIPQWHCSGKYVAVVGGSLVMWDAFLHPAVLG*
Ga0182106_10654712	3300015298	Miscanthus Phyllosphere	VKYSSPQVYFVVLAHLVVAGGSLVIEIRGRLIPQWHCSRKYVVVVGGSLVMWDTFLHPAVLG*
Ga0182106_10819941	3300015298	Miscanthus Phyllosphere	CLVVAGGSLVIGIRGRLIPRQHCARMYVVVVGGSLVMWASFLHLAVLG*
Ga0182106_10995282	3300015298	Miscanthus Phyllosphere	VLVHLVVARVSLVIGIRSRLIPQWHCSEKYVVVVGGSLVMWDAFLQPAVLG*
Ga0182123_10821591	3300015303	Miscanthus Phyllosphere	VIGIRGRLIPQQHCTRMYVVVVGGSLVMWASFLHLAVL
Ga0182112_10872351	3300015304	Miscanthus Phyllosphere	VLVHLVVAGGSLVIGIRGRRISRWHCSGKYVAAVGGSLVMWDTFLHPTVLD*
Ga0182158_10151041	3300015305	Miscanthus Phyllosphere	FVVPVRLVVAGGSLVVGVRGRLTLQQQCTRKYVAVVGGSLVIWASFLHPAVLG*
Ga0182144_10583391	3300015307	Miscanthus Phyllosphere	SSPRAYSVVLVHLVVAEGSLVIGIRGRLIPRQHCTWKYVTVVGGSLVMWDTFLHPAILG*
Ga0182142_11124961	3300015308	Miscanthus Phyllosphere	MYFVVLVYLVEAGGSLVIGIRGRLIPQRHCTRKYVVEVGGSLVMRDTFLHPAVLGRSPCLPYDCPVQINA*
Ga0182142_11131231	3300015308	Miscanthus Phyllosphere	YLVVAGGSFVIGIRGRLISQQHCIRKYVAVVGGSLVMWDTFLHPVVLG*
Ga0182164_11017522	3300015313	Switchgrass Phyllosphere	CLVVARGSLVIGIRGRLVPRQHCARMYVVVVGGSLVMWASFLHLAVLG*
Ga0182140_10553702	3300015314	Miscanthus Phyllosphere	SPRAYFVVLVYLVVAGGSLVIGIRGRLILQRHCTRRYMAVVGGSLVMWDTFLHPAVLG*
Ga0182140_10674031	3300015314	Miscanthus Phyllosphere	VYLVVAGGSVVIGIRGRLIPQRHCTWKYVAVVGGSLMMWDVFLHLAVLG*
Ga0182127_10835432	3300015321	Miscanthus Phyllosphere	AYFVVFVYLVIAGGSLAIGIRGRLIPQQHCIRRYVAVVGGSLVMWDTSLHPAVPG*
Ga0182110_10405671	3300015322	Miscanthus Phyllosphere	GSLVIEIRGRLIPLRFHTWKYVAVVGGSLVMWDAFLHPAVLG*
Ga0182110_10800331	3300015322	Miscanthus Phyllosphere	PRAYFVVPVRLVVAGGSLVIGIRGRLIPHRHCTWKYMVVVGESLVMWDVFLHLAVLG*
Ga0182129_11126781	3300015323	Miscanthus Phyllosphere	YFVVLVHLVVAGGSLVVGIRGRLIPQRFHTWKYVVVVGGSLVMRDAFLHPAVLG*
Ga0182187_10634471	3300015341	Miscanthus Phyllosphere	GGSLVIGIRGRLIPQQHCTWKYVVVVGGSLVMWDAILHLAVLG*
Ga0182187_11071481	3300015341	Miscanthus Phyllosphere	VIAGGSLVIGIRGRLIPQQHCTWKYVVVVGGSLVMWDAFLHPAVLG*
Ga0182187_11678401	3300015341	Miscanthus Phyllosphere	LVVAGGSLVIGIRGRLIPRQHCARMYVVVVGGSLVMWASFLHLAVLG*
Ga0182109_11170511	3300015342	Miscanthus Phyllosphere	VEWSSPWAYFVVLVCLAIAKGSLVIGIRGRLIPQQHCTWKYVAAVGGSLVMWDAILHLAVLG*
Ga0182109_12012201	3300015342	Miscanthus Phyllosphere	SSRAWFVILVYLVVDGESLVIEIRGRLISQQHCTRKYVAVGGGSLVMWDTFPHPAVLG*
Ga0182155_10577551	3300015343	Miscanthus Phyllosphere	YFVVLVYLVVARGSLVIGIRGRLISQRHCTRKYVAVVGGSLVMWDMFLHLAFLG*
Ga0182155_12192522	3300015343	Miscanthus Phyllosphere	VYFVVLVYFVVAGGSLVIGIRGRLIPQRHCTWKYMVVVGGSLVMWASFLHPAVLG*
Ga0182189_11897121	3300015344	Miscanthus Phyllosphere	MIVCEVEQPPSVFVVLVYLVIAGGSLVIGIRGRLIPQQHCTRGYVAVVGGSLVMWDTFLHPAVLG*
Ga0182189_12239462	3300015344	Miscanthus Phyllosphere	AYFVVLVYLVVAGGSLVIGIRGRLISQRHCTRKYVAVVGGSLVMWDTFLHPAVLGRSP*
Ga0182111_12049842	3300015345	Miscanthus Phyllosphere	RLVIAGGSLVIGIRGRLIPQRHCTWKYMVVVGGSLVMWASFLHPVVLG*
Ga0182111_12272492	3300015345	Miscanthus Phyllosphere	VLVYLVVAGGSLVIGIRGRLNSQRHCTRKYVAVVGVSLVMWDMFLHLAVLG*
Ga0182139_12047992	3300015346	Miscanthus Phyllosphere	LVYLVVAGGSLVIGIRGRLISQRHCTRKYVAVVGGSLVMWDTFLHPAVLG*
Ga0182177_10583281	3300015347	Miscanthus Phyllosphere	VSFVVPVRLVVAGGSLVIGVRGRLTPQQQCTRKYVAVVGGSLVMWASFLHPAVLG*
Ga0182177_11539461	3300015347	Miscanthus Phyllosphere	GGSLVIGIRGRLIPQQHCTWKYVAVVGASLVMWDAILHLAVLG*
Ga0182177_12188172	3300015347	Miscanthus Phyllosphere	VLVHLVIAGGSLVIGIRGRLIPQQHCTWKYVAVVGGSLVMWDTFLHQAVLG*
Ga0182161_10467932	3300015351	Miscanthus Phyllosphere	VYFVVLVYLVVDGGSLVIEIRGRLISQQHCTRKYVAVGGGSLVMWDMFPHLAVLG*
Ga0182161_12364351	3300015351	Miscanthus Phyllosphere	LPVYFVVLVHFVVAGGSLMIEIRGRLIPQRHCTWKYVVVVGGSLVMWASFLHPAVLG*
Ga0182159_11082051	3300015355	Miscanthus Phyllosphere	VCFVVPVCLVIAGGSLVIGIRGRLIPQQQCTRMYVAVVGGSLVMWALFLHL
Ga0182159_12285591	3300015355	Miscanthus Phyllosphere	VIGIRGRLISQRHCTGKYVEVVGGSLVMWDTFLHPAV
Ga0182159_12764141	3300015355	Miscanthus Phyllosphere	AYFVVPVHLVVAGGSLVIGIRGRLIPQRFRTWKYVAVVGASLVMWDAFLHPAVLG*
Ga0182145_10836051	3300015361	Miscanthus Phyllosphere	AYFAVLLYLAVAGGSLVIGIRGRLIQQQHCTWKYMVVVGGSLVMWDAILHLAVLG*
Ga0182203_10868261	3300017404	Miscanthus Phyllosphere	RAYFIVLVYLVVAGGSLVIGIRGRLISQRHCTRKYVAVVGGSLVMWDAFLHPAVLG
Ga0182203_11096131	3300017404	Miscanthus Phyllosphere	IGVRGRLTPQQQCTRKYVAVVGGSLVMWASFLHPTVLG
Ga0182203_11608241	3300017404	Miscanthus Phyllosphere	VEQPRVYFTVLVYLAVAGGSLVIRIRDRLIPQQHCTWKYMAVVGESLVMWDTFLHLAVLG
Ga0182220_10137192	3300017407	Miscanthus Phyllosphere	YLVVAGGSLVIGVRGRLIPQWRCIRKLVVVVGGSLVMWASSLHPAVLG
Ga0182220_10323521	3300017407	Miscanthus Phyllosphere	VYFVVLIHLVIAGGSLVIGIRGRLIPQWHCSGKYVAVVGGSLVMWDAFLHPTVLG
Ga0182204_10341081	3300017409	Miscanthus Phyllosphere	VLVYLVIAGGSLVIGIRGRLISQRHCTGKYVAVVGGSLVMWDTFLHPVVLG
Ga0182207_10350721	3300017410	Miscanthus Phyllosphere	VIGIRGRLIPQRQCTRRYVAVVGGSLVMWASFLHPTVLGWYS
Ga0182207_10896152	3300017410	Miscanthus Phyllosphere	VAGGSFVIGIRGRLISQQHCIRKYVAVVGGSLVMWDTFLHPAVLG
Ga0182207_11239682	3300017410	Miscanthus Phyllosphere	VFLVHLVVAGGSLVIGISGRLIPQRHCFRKYVVVAGGSLVMWDTSLHPAVPG
Ga0182207_11435201	3300017410	Miscanthus Phyllosphere	GIRGRLIPQQQCTRMYVEVVGGSLVMWASFLHLAVLS
Ga0182208_10246831	3300017411	Miscanthus Phyllosphere	CFVVSVCLVVAGGSLVIGIRGRLIPQQQRTRMYVAVVGGSFVMWASFLHLAVLG
Ga0182208_10268621	3300017411	Miscanthus Phyllosphere	IAVFVYLVVAGGSLVIGIRGRLIPQRRCIRKFMAVVGGSLVMWALSLHPAVLG
Ga0182208_10566561	3300017411	Miscanthus Phyllosphere	VIGIRGRLIPQQQCIRMYVAVVGGSLVIWTSFLHLAV
Ga0182208_11251292	3300017411	Miscanthus Phyllosphere	VYLAVVGGSLVIGITGRLIPQQHCTWKYMAVVGGSLVMWDAILHLVVLG
Ga0182222_11084641	3300017413	Miscanthus Phyllosphere	LVVVGGSLVIGIRGRLILWQQCTRMYVAVVGGSLVMWTSFLHLAVLG
Ga0182202_11136292	3300017415	Miscanthus Phyllosphere	PQAYFVVPVCLVVAGGSLVKGIRGRLILRQHCTRMYVAVVGGSLMMWALFLHLAVLG
Ga0182202_11215641	3300017415	Miscanthus Phyllosphere	VYFVVLVHFVVAGGSLVIGISGRLIPQRHCFRKYVVVAGGSLVMWDTSLHPAVPG
Ga0182202_11395821	3300017415	Miscanthus Phyllosphere	VCFVVLVYLAVAGGSLVIGIRGRLISQQHCTWKYVAVVGGSLVMWDAILHLAVLG
Ga0182230_10735931	3300017417	Miscanthus Phyllosphere	VYFVVLVHLVVAGGSLVIGIRGRLIPQWHCSEKYVAVVGGSLVMWDTFLHPAVLG
Ga0182230_10821131	3300017417	Miscanthus Phyllosphere	YFVVPVCLVVAGGSLVIGIRGRLIPRQHCARMYVVVVGGSLVMWASFLHPAVLG
Ga0182228_10654821	3300017420	Miscanthus Phyllosphere	AYFVVLVHLVVARGSLVIGIRGRLIPQWHCSGKYMAVVGGSLVMWDTFLHPTVLG
Ga0182228_10838831	3300017420	Miscanthus Phyllosphere	VPVCLIVAGGSLVIGIRGRLLPRQHCARMYVAVVGGSLVMWASFLHLAVLD
Ga0182224_10306881	3300017425	Miscanthus Phyllosphere	FVVPVCLVVAGGSLVIGIRGRLIPRQHCARMYVVVVGGSLVMWASFLHPAVLG
Ga0182224_10422001	3300017425	Miscanthus Phyllosphere	RAYFVVPVCLVVAGGSLVIGIRGRLIPRQHCARMYVVVVGGSLVMRASFLHLAVPG
Ga0182224_10529941	3300017425	Miscanthus Phyllosphere	LVVLVYLVIARGSLVIEIRGRLISQRHCTSRYVAVVGGSLVMWDTFLHPAVLGRSP
Ga0182224_10629131	3300017425	Miscanthus Phyllosphere	VYFVVLIHFVVAGESLVIGIRGRLIPQRHCTWKYVVVVGGSLVMWASFLHP
Ga0182224_10960701	3300017425	Miscanthus Phyllosphere	VVARGSLVLEIRGRLISQWHCTRRYVVVVGGSLVIRDTFLHPVVLGKSPLPTL
Ga0182224_11282972	3300017425	Miscanthus Phyllosphere	EIRGRLIPQRHCTWKYVVVVGESLMMWASFLHPIVLG
Ga0182190_10110843	3300017427	Miscanthus Phyllosphere	VVPVCFVVAGGSLVIGIRGRLIPRQHCARMYVVVVGGSLVMRASFLHLAVLG
Ga0182190_10232232	3300017427	Miscanthus Phyllosphere	ASFVVPVRLVVAGGSLVIGVRGRLTPQQQCIRKYVAVVGGSLVMWALFLHPVVLG
Ga0182190_11159741	3300017427	Miscanthus Phyllosphere	YFVVLVHLIVAGGSLVIGIRGRLIPRWHCSGKYVAVVGGSLVMWDTFLHPAVLG
Ga0182192_10886011	3300017430	Miscanthus Phyllosphere	VVLVHLVVAGGSLVIGIRGRLISQRHCSRKYVAVVGGSLVMWDMFLHPAVLG
Ga0182192_11562461	3300017430	Miscanthus Phyllosphere	AYFVVPVHLVIAGGSLVIGIRGRLIPQQHCTWKYVVVVGGSLVMWDAFLHPVVLS
Ga0182206_10695361	3300017433	Miscanthus Phyllosphere	PRTYFVVPVHLVVAGGILVIGIRGRLILQRFRTWKYVAVVGGSLVMWDAILHMAVLG
Ga0182206_11574531	3300017433	Miscanthus Phyllosphere	VRLVVAEGSLVIGIKGRLIPQRFRTWKYVAVVGGSLVMWDAFLHPAVLG
Ga0182209_10243311	3300017436	Miscanthus Phyllosphere	SPRASFVVPVRLVVAGGSLVIGVRGRLTPQQQCTRKYVAVVGGSLVMWASFLHPTVLG
Ga0182209_10658781	3300017436	Miscanthus Phyllosphere	VCLVVVGGGLVIGIRGRLIPRQQCTRMYVAVVGGSLVMWTSFLHLAVLG
Ga0182209_11059211	3300017436	Miscanthus Phyllosphere	VYFVVPVCLVVAGGSLVKGIRGRLILRQHCTRMYVAVVGGSLMMWALFLHLAVLG
Ga0182209_11065062	3300017436	Miscanthus Phyllosphere	MYFVVLVHLVVAGGSLVIGIRGRLILQRHCTGKYVAVVGGSFVMWDTFLHPIVLG
Ga0182209_11672671	3300017436	Miscanthus Phyllosphere	VEWSSPWAYFVVLVCLAIAGGSLVIGIRGRLILQQHYTWKYVAVVGGSLVMWDVILHLAVLG
Ga0182221_10250121	3300017442	Miscanthus Phyllosphere	PVRLVVAGGSLVIGVRGRLTPQQQCTRKYVAVVGGSLVMWASFLHPAVLG
Ga0182221_11623541	3300017442	Miscanthus Phyllosphere	VVAGGSLVIGIRGRLIPRQHCARMYVVVVGGSLVMWASFLHLAVLG
Ga0182193_10262121	3300017443	Miscanthus Phyllosphere	PVCFVVAGGSLVIGIRGRLIPRQHCARMYVVVVGGSLVMRASFLHLAVPG
Ga0182193_11275112	3300017443	Miscanthus Phyllosphere	VVYLVVAGGSLVIGVRGRLIPQWRCIRKLVAVVGGSLVMWASFLHPTVLG
Ga0182233_10542241	3300017680	Miscanthus Phyllosphere	AGGSLGIGIRGGLIPHWHCTWKYVVVVGGSLVMWASFLHPTVLG
Ga0182233_10560821	3300017680	Miscanthus Phyllosphere	VYFVVLVHLVIAGGSLVIGIRGRLIPQRYCTWKYMVVVGGSLVMWDAFLHPVVLG
Ga0182233_10922122	3300017680	Miscanthus Phyllosphere	LVYLVVAGGSLVIGIRGRLILQRHCTRKYVAVVGGSLVMWDTFLHPAVLG
Ga0182229_10427691	3300017682	Miscanthus Phyllosphere	VIGIRGRLIPQRHCTWKYVVVVGGSLVMWASFLHPAV
Ga0182225_10231691	3300017684	Miscanthus Phyllosphere	VAGGSLVIGIRGRLIPRQHCARMYVVVVGGSLVMWALFLHPAVLG
Ga0182227_10902861	3300017685	Miscanthus Phyllosphere	VYFVVLIHLVIAGGSLVIGIRGRLIPQWHCSGKYVAVVGGSLVMWASFLHLAVLG
Ga0182227_11038041	3300017685	Miscanthus Phyllosphere	YFVVPVCLVVAGGSLVIGIRGRLIPRQHCARMYVVVVGGSLVMWALFLHPAVLG
Ga0182227_11144471	3300017685	Miscanthus Phyllosphere	PVCLVVAGGSLVIGIRGRLIPQRHCTWKYVVVVGGSLVMWASFLHPAVLG
Ga0182205_11119381	3300017686	Miscanthus Phyllosphere	VHLIVAGGSLVIGIRGRLIPQRFRTWKYVAVVGGSLVIWDAFLYLAVLG
Ga0182205_11285931	3300017686	Miscanthus Phyllosphere	VYFVVLVYLVVAGGSLVIGIRGRLIPQQHFTWKYMAVVGGSLVIWDAILHLAVLG
Ga0182231_10929571	3300017689	Miscanthus Phyllosphere	VKWSRPGAYFAVLVCLAVAGGSLVIGIRGRLIPQQQCTRMYVAVVGGSLVMWA
Ga0182223_10608591	3300017690	Miscanthus Phyllosphere	LVCLVVDGGSLVIEIRGRLISQRHCTKKYVAVGGGSLMMWDTFPHLAVLG
Ga0182232_10562793	3300021060	Phyllosphere	LVHLVVAGESLVIGIRGRLIPQQYCTWKYVAVVGGSLVMWDAILHLAVLG
Ga0182232_10825841	3300021060	Phyllosphere	VPVCLVVAGGSLVIGIRGRLIPQRHCTWKYVVVVGGSLVMWASFLHPAVLG
Ga0207645_103131802	3300025907	Miscanthus Rhizosphere	MNMVVCEVEQPRAYFVVPVCLVVAGGSLVIGIRGRLIPRQHCARMYVVVVGGSLVMWASFLHLAVLG
Ga0207643_109971031	3300025908	Miscanthus Rhizosphere	FVVPVCLVVAGGSLVIGIRGRLIPRQHCARMYVVVVGGSLVMWASFLHLAVLG
Ga0207659_108128882	3300025926	Miscanthus Rhizosphere	PVCLVVAGGSLVIGIRGRLIPRQHCARMYVVVVGGSLVMWALFLHPAVLG
Ga0207648_117294321	3300026089	Miscanthus Rhizosphere	ARGSLVIGIRGRLILQQHCTWKYVVVVGGSLVMWDVFLHPAVMG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F052347

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences