Metagenome Family F052326

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052326
Family Type	Metagenome
Number of Sequences	142
Average Sequence Length	77 residues
Representative Sequence	LSSDVWQARIDLCVDKESKTYWIMLRLRSDSGDEKKHMSILIPKTALSDALQRASNFEEKGFHEKAEEPPDLPEAEGD
Number of Associated Samples	53
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	76.76 %
% of genes near scaffold ends (potentially truncated)	24.65 %
% of genes from short scaffolds (< 2000 bps)	65.49 %
Associated GOLD sequencing projects	46
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (50.000 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (29.578 % of family members)
Environment Ontology (ENVO)	Unclassified (43.662 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (54.225 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.09% β-sheet: 25.47% Coil/Unstructured: 59.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF00149	Metallophos	42.96
PF16916	ZT_dimer	9.15
PF05239	PRC	8.45
PF02475	Met_10	2.82
PF01812	5-FTHF_cyc-lig	2.11
PF01545	Cation_efflux	2.11
PF01012	ETF	1.41
PF00528	BPD_transp_1	1.41
PF04027	DUF371	1.41
PF02915	Rubrerythrin	1.41
PF01135	PCMT	1.41
PF00202	Aminotran_3	0.70
PF01494	FAD_binding_3	0.70
PF00867	XPG_I	0.70
PF13184	KH_5	0.70
PF09190	DALR_2	0.70
PF12704	MacB_PCD	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG2520	tRNA G37 N-methylase Trm5	Translation, ribosomal structure and biogenesis [J]	2.82
COG1092	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	Translation, ribosomal structure and biogenesis [J]	2.82
COG2265	tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family	Translation, ribosomal structure and biogenesis [J]	2.82
COG2264	Ribosomal protein L11 methylase PrmA	Translation, ribosomal structure and biogenesis [J]	2.82
COG0212	5-formyltetrahydrofolate cyclo-ligase	Coenzyme transport and metabolism [H]	2.11
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	2.11
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	2.11
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	2.11
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	1.41
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	1.41
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	1.41
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	1.41
COG2090	Uncharacterized conserved protein, DUF371 domain	Function unknown [S]	1.41
COG2086	Electron transfer flavoprotein, alpha and beta subunits	Energy production and conversion [C]	1.41
COG2025	Electron transfer flavoprotein, alpha subunit FixB	Energy production and conversion [C]	1.41
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.41
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.70
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.70
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.70
COG0215	Cysteinyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.11 %
Unclassified	root	N/A	47.89 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.00 %
Unclassified	root	N/A	47.89 %
Viruses	superkingdom	All Organisms → Viruses	2.11 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	50.00 %
Unclassified	root	N/A	47.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.89 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	11.97 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	5.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.11 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.89 %
archaeon RBG_16_50_20	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	11.97 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	2.11 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.11 %
Crenarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota	1.41 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.89 %
archaeon RBG_16_50_20	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	11.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.11 %
Thermoprotei	class	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei	1.41 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	1.41 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.89 %
archaeon RBG_16_50_20	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	11.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.11 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1.41 %
Desulfurococcales	order	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales	0.70 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000229\|TB_LI09_3DRAFT_1020794	Not Available	1726	Open in IMG/M
3300002465\|LO132_10000021	All Organisms → cellular organisms → Archaea	32633	Open in IMG/M
3300002465\|LO132_10001470	All Organisms → cellular organisms → Archaea	10480	Open in IMG/M
3300002465\|LO132_10009399	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	4463	Open in IMG/M
3300002465\|LO132_10010551	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	4194	Open in IMG/M
3300009552\|Ga0116138_1087071	All Organisms → cellular organisms → Archaea	871	Open in IMG/M
3300009552\|Ga0116138_1157216	Not Available	627	Open in IMG/M
3300009614\|Ga0116104_1005757	All Organisms → cellular organisms → Archaea	4561	Open in IMG/M
3300010302\|Ga0116202_10000567	All Organisms → cellular organisms → Archaea	20769	Open in IMG/M
3300010302\|Ga0116202_10014961	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	4349	Open in IMG/M
3300010302\|Ga0116202_10498945	Not Available	539	Open in IMG/M
3300010319\|Ga0136653_10000091	All Organisms → cellular organisms → Archaea	41333	Open in IMG/M
3300010319\|Ga0136653_10021685	All Organisms → cellular organisms → Archaea	3359	Open in IMG/M
3300010324\|Ga0129297_10000390	All Organisms → cellular organisms → Archaea	20952	Open in IMG/M
3300010324\|Ga0129297_10003994	All Organisms → cellular organisms → Archaea → Euryarchaeota	7487	Open in IMG/M
3300010324\|Ga0129297_10017895	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	3476	Open in IMG/M
3300010324\|Ga0129297_10031175	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	2595	Open in IMG/M
3300010324\|Ga0129297_10044256	Not Available	2146	Open in IMG/M
3300010324\|Ga0129297_10046327	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	2094	Open in IMG/M
3300010324\|Ga0129297_10071840	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	1645	Open in IMG/M
3300010324\|Ga0129297_10078836	Not Available	1562	Open in IMG/M
3300010324\|Ga0129297_10139087	Not Available	1133	Open in IMG/M
3300010324\|Ga0129297_10243421	Not Available	818	Open in IMG/M
3300010324\|Ga0129297_10390863	All Organisms → cellular organisms → Archaea	621	Open in IMG/M
3300010324\|Ga0129297_10444019	All Organisms → cellular organisms → Archaea	576	Open in IMG/M
3300010328\|Ga0129298_10098994	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	1382	Open in IMG/M
3300010328\|Ga0129298_10142298	Not Available	1131	Open in IMG/M
3300010328\|Ga0129298_10481759	Not Available	564	Open in IMG/M
3300010328\|Ga0129298_10548734	Not Available	521	Open in IMG/M
3300012931\|Ga0153915_10228946	Not Available	2051	Open in IMG/M
3300012931\|Ga0153915_10487558	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	1408	Open in IMG/M
3300012931\|Ga0153915_11407733	Not Available	815	Open in IMG/M
3300012931\|Ga0153915_12312636	Not Available	629	Open in IMG/M
3300012964\|Ga0153916_10457888	All Organisms → cellular organisms → Archaea	1342	Open in IMG/M
3300012964\|Ga0153916_10598643	Not Available	1179	Open in IMG/M
3300012964\|Ga0153916_10715466	Not Available	1081	Open in IMG/M
3300012964\|Ga0153916_10812616	Not Available	1015	Open in IMG/M
3300012964\|Ga0153916_11441344	Not Available	764	Open in IMG/M
3300012964\|Ga0153916_12467521	All Organisms → cellular organisms → Archaea	585	Open in IMG/M
3300012964\|Ga0153916_13047433	Not Available	527	Open in IMG/M
3300013090\|Ga0163209_1105971	Not Available	968	Open in IMG/M
(restricted) 3300013130\|Ga0172363_10960474	Not Available	528	Open in IMG/M
3300017939\|Ga0187775_10293963	Not Available	638	Open in IMG/M
3300017939\|Ga0187775_10445714	All Organisms → cellular organisms → Archaea	545	Open in IMG/M
3300017966\|Ga0187776_10052770	Not Available	2317	Open in IMG/M
3300017966\|Ga0187776_10522786	Not Available	815	Open in IMG/M
3300017966\|Ga0187776_10551003	Not Available	796	Open in IMG/M
3300017966\|Ga0187776_10773650	Not Available	686	Open in IMG/M
3300018005\|Ga0187878_1000235	All Organisms → cellular organisms → Archaea	69524	Open in IMG/M
3300018021\|Ga0187882_1008299	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	7322	Open in IMG/M
3300018055\|Ga0184616_10256868	Not Available	663	Open in IMG/M
3300018064\|Ga0187773_10187978	Not Available	1091	Open in IMG/M
3300018064\|Ga0187773_10455250	Not Available	753	Open in IMG/M
3300018064\|Ga0187773_11018731	All Organisms → cellular organisms → Archaea	544	Open in IMG/M
3300018088\|Ga0187771_10173003	Not Available	1784	Open in IMG/M
3300018088\|Ga0187771_10917912	All Organisms → cellular organisms → Archaea → TACK group	743	Open in IMG/M
3300018089\|Ga0187774_10080600	All Organisms → cellular organisms → Archaea	1548	Open in IMG/M
3300018089\|Ga0187774_10260699	Not Available	987	Open in IMG/M
3300018089\|Ga0187774_10517453	Not Available	755	Open in IMG/M
3300018089\|Ga0187774_11440192	All Organisms → cellular organisms → Archaea	507	Open in IMG/M
3300022221\|Ga0224506_10229337	All Organisms → cellular organisms → Archaea	850	Open in IMG/M
3300022551\|Ga0212089_10000397	All Organisms → cellular organisms → Archaea	31441	Open in IMG/M
3300022551\|Ga0212089_10000781	All Organisms → cellular organisms → Archaea	23573	Open in IMG/M
3300022551\|Ga0212089_10001147	All Organisms → cellular organisms → Archaea	20037	Open in IMG/M
3300022551\|Ga0212089_10013485	All Organisms → cellular organisms → Archaea	5465	Open in IMG/M
3300022551\|Ga0212089_10020109	All Organisms → cellular organisms → Archaea	4315	Open in IMG/M
3300022551\|Ga0212089_10020533	All Organisms → cellular organisms → Archaea	4265	Open in IMG/M
3300022551\|Ga0212089_10023337	All Organisms → cellular organisms → Archaea → TACK group	3946	Open in IMG/M
3300022551\|Ga0212089_10028530	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	3485	Open in IMG/M
3300022551\|Ga0212089_10033823	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	3132	Open in IMG/M
3300022551\|Ga0212089_10037013	All Organisms → cellular organisms → Archaea	2955	Open in IMG/M
3300022551\|Ga0212089_10042017	All Organisms → cellular organisms → Archaea → TACK group	2728	Open in IMG/M
3300022551\|Ga0212089_10042112	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2725	Open in IMG/M
3300022551\|Ga0212089_10068760	Not Available	1987	Open in IMG/M
3300022551\|Ga0212089_10072536	Not Available	1918	Open in IMG/M
3300022551\|Ga0212089_10117359	Not Available	1399	Open in IMG/M
3300022551\|Ga0212089_10152002	Not Available	1180	Open in IMG/M
3300022551\|Ga0212089_10175536	Not Available	1074	Open in IMG/M
3300022551\|Ga0212089_10223633	Not Available	915	Open in IMG/M
3300022551\|Ga0212089_10266183	All Organisms → cellular organisms → Archaea	816	Open in IMG/M
3300022553\|Ga0212124_10057173	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	2281	Open in IMG/M
3300022553\|Ga0212124_10114099	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	1510	Open in IMG/M
3300022556\|Ga0212121_10000916	All Organisms → cellular organisms → Archaea	32529	Open in IMG/M
3300022556\|Ga0212121_10002053	Not Available	21613	Open in IMG/M
3300022556\|Ga0212121_10004517	All Organisms → cellular organisms → Archaea	14450	Open in IMG/M
3300022556\|Ga0212121_10335049	Not Available	1011	Open in IMG/M
3300022556\|Ga0212121_10423189	Not Available	868	Open in IMG/M
3300022556\|Ga0212121_10911709	All Organisms → cellular organisms → Archaea	524	Open in IMG/M
3300025136\|Ga0209610_1034469	Not Available	1867	Open in IMG/M
3300025143\|Ga0209314_10002447	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales	7938	Open in IMG/M
3300025143\|Ga0209314_10235368	Not Available	592	Open in IMG/M
3300025144\|Ga0209725_1143359	Not Available	756	Open in IMG/M
3300025164\|Ga0209521_10387711	Not Available	766	Open in IMG/M
3300025409\|Ga0208321_1001402	All Organisms → cellular organisms → Archaea	7470	Open in IMG/M
3300025454\|Ga0208039_1073675	Not Available	604	Open in IMG/M
(restricted) 3300027799\|Ga0233416_10085091	Not Available	1077	Open in IMG/M
3300027811\|Ga0256868_10233117	Not Available	775	Open in IMG/M
3300027902\|Ga0209048_10239362	Not Available	1299	Open in IMG/M
3300030613\|Ga0299915_10404447	All Organisms → cellular organisms → Archaea	914	Open in IMG/M
(restricted) 3300031587\|Ga0315308_1158465	Not Available	872	Open in IMG/M
3300031707\|Ga0315291_10022268	All Organisms → cellular organisms → Archaea	7537	Open in IMG/M
3300031707\|Ga0315291_10207877	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	1989	Open in IMG/M
3300031707\|Ga0315291_10227435	Not Available	1880	Open in IMG/M
3300031707\|Ga0315291_10516336	Not Available	1104	Open in IMG/M
3300031746\|Ga0315293_10004171	All Organisms → cellular organisms → Archaea	13796	Open in IMG/M
3300031746\|Ga0315293_10376422	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	1122	Open in IMG/M
3300031772\|Ga0315288_10258418	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	1847	Open in IMG/M
3300031772\|Ga0315288_10352512	All Organisms → Viruses → Predicted Viral	1512	Open in IMG/M
3300031772\|Ga0315288_10590884	All Organisms → cellular organisms → Archaea	1073	Open in IMG/M
(restricted) 3300031806\|Ga0315306_10209005	All Organisms → cellular organisms → Archaea	721	Open in IMG/M
3300031862\|Ga0315280_10001199	All Organisms → cellular organisms → Archaea	45384	Open in IMG/M
3300031862\|Ga0315280_10019018	All Organisms → cellular organisms → Archaea	7524	Open in IMG/M
3300031862\|Ga0315280_10043724	All Organisms → cellular organisms → Archaea	3988	Open in IMG/M
3300031862\|Ga0315280_10131794	Not Available	1627	Open in IMG/M
3300031862\|Ga0315280_10160254	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	1376	Open in IMG/M
3300031862\|Ga0315280_10321694	Not Available	759	Open in IMG/M
(restricted) 3300031876\|Ga0315310_10213471	Not Available	858	Open in IMG/M
(restricted) 3300031877\|Ga0315314_1000019	All Organisms → cellular organisms → Archaea	288054	Open in IMG/M
(restricted) 3300031877\|Ga0315314_1002367	All Organisms → cellular organisms → Archaea	15632	Open in IMG/M
(restricted) 3300031877\|Ga0315314_1098930	Not Available	1227	Open in IMG/M
(restricted) 3300031898\|Ga0315312_1117030	Not Available	821	Open in IMG/M
3300032020\|Ga0315296_10022607	All Organisms → cellular organisms → Archaea	4518	Open in IMG/M
3300032020\|Ga0315296_10217059	Not Available	1133	Open in IMG/M
3300032020\|Ga0315296_10250290	All Organisms → Viruses → Predicted Viral	1030	Open in IMG/M
3300032069\|Ga0315282_10001024	All Organisms → cellular organisms → Archaea	54054	Open in IMG/M
3300032069\|Ga0315282_10034818	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei	6146	Open in IMG/M
3300032069\|Ga0315282_10180127	Not Available	1587	Open in IMG/M
3300032069\|Ga0315282_10186537	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	1543	Open in IMG/M
3300032070\|Ga0315279_10514800	All Organisms → cellular organisms → Archaea	780	Open in IMG/M
3300032156\|Ga0315295_12178811	Not Available	516	Open in IMG/M
3300032163\|Ga0315281_10501667	All Organisms → Viruses → Predicted Viral	1291	Open in IMG/M
3300032173\|Ga0315268_10000668	All Organisms → cellular organisms → Archaea	39825	Open in IMG/M
3300032173\|Ga0315268_10006779	All Organisms → cellular organisms → Archaea	12143	Open in IMG/M
3300032173\|Ga0315268_10215835	Not Available	1838	Open in IMG/M
3300032173\|Ga0315268_10234691	Not Available	1762	Open in IMG/M
3300032173\|Ga0315268_10386023	Not Available	1368	Open in IMG/M
3300032173\|Ga0315268_10557686	Not Available	1134	Open in IMG/M
3300032173\|Ga0315268_11845970	Not Available	618	Open in IMG/M
3300032401\|Ga0315275_10352841	Not Available	1648	Open in IMG/M
3300032829\|Ga0335070_10936235	Not Available	801	Open in IMG/M
3300033486\|Ga0316624_10623369	Not Available	941	Open in IMG/M
3300033513\|Ga0316628_103208800	Not Available	595	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	85.21%
Terrestrial	Environmental → Terrestrial	14.79%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	83.80%
Soil	Environmental → Terrestrial → Soil	14.79%
Marine	Environmental → Aquatic → Marine	0.70%
Sediment	Environmental → Aquatic → Sediment	0.70%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	66.90%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.68%
Microbialites	Environmental → Aquatic → Freshwater → Microbialites	2.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	2.11%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.70%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.70%
Sediment	Environmental → Aquatic → Marine → Sediment	0.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	56.34%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.68%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	11.27%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	10.56%
Unclassified	Environmental → Aquatic → Freshwater → Microbialites → Unclassified	2.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.11%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.41%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.70%
Cave Water	Environmental → Aquatic → Freshwater → Groundwater → Cave Water	0.70%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	29.58%
Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Lake Sediment	26.76%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	10.56%
Anoxic Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Lake Water	8.45%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	7.75%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.52%
Freshwater Lake	Environmental → Aquatic → Freshwater → Microbialites → Unclassified → Freshwater Lake	2.82%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.11%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.11%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.41%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.70%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Cave Water → Groundwater	0.70%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.70%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000229	Groundwater microbial communities from subsurface biofilms in sulfidic aquifier in Frasassi Gorge, Italy, sample from two redox zones- LI09_3	Environmental	Open in IMG/M
3300002465	Anoxic frehswater biofilm from Lago dell Orsa, Frasassi caves, Italy	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009614	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_150	Environmental	Open in IMG/M
3300010302	Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 325m metaG	Environmental	Open in IMG/M
3300010319	Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 275m metaG	Environmental	Open in IMG/M
3300010324	Lake sediment bacterial and archeal communities from Gulf of Boni, Indonesia to study Microbial Dark Matter (Phase II) - ?I18A1 metaG	Environmental	Open in IMG/M
3300010328	Lake sediment bacterial and archeal communities from Gulf of Boni, Indonesia to study Microbial Dark Matter (Phase II) - ?I19B2 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013090	Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_160m	Environmental	Open in IMG/M
3300013130 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment s2_kivu2a2	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300022221	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_8_1	Environmental	Open in IMG/M
3300022551	Boni_combined assembly	Environmental	Open in IMG/M
3300022553	Powell_combined assembly	Environmental	Open in IMG/M
3300022556	Kivu_combined assembly	Environmental	Open in IMG/M
3300025136	Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 275m metaG (SPAdes)	Environmental	Open in IMG/M
3300025143	Lake sediment bacterial and archeal communities from Gulf of Boni, Indonesia to study Microbial Dark Matter (Phase II) - ?I19B2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025144	Lake sediment bacterial and archeal communities from Gulf of Boni, Indonesia to study Microbial Dark Matter (Phase II) - ?I18A1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025164	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 4	Environmental	Open in IMG/M
3300025409	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_150 (SPAdes)	Environmental	Open in IMG/M
3300025454	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150 (SPAdes)	Environmental	Open in IMG/M
3300027799 (restricted)	Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0_MG	Environmental	Open in IMG/M
3300027811	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227 HiSeq	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300030613	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227	Environmental	Open in IMG/M
3300031587 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP3	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031806 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP1	Environmental	Open in IMG/M
3300031862	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_40	Environmental	Open in IMG/M
3300031876 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP5	Environmental	Open in IMG/M
3300031877 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP9	Environmental	Open in IMG/M
3300031898 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP7	Environmental	Open in IMG/M
3300032020	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_18	Environmental	Open in IMG/M
3300032069	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20	Environmental	Open in IMG/M
3300032070	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_20	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
TB_LI09_3DRAFT_10207942	3300000229	Groundwater	VPRRDALVGKTEEGSELSTDVWQARIDLCVDKESKTYWIMLRLRSDSGDEKKHMSILVPKTALSEALQRASDFEKKGFHEKAEEPPDLPEAEND*
LO132_1000002113	3300002465	Freshwater Lake	LSSDVWQARIDLCVDKESKTYWIMLRLRSDSGDEKKHMSILVPKTALSEALQRASGFEEKGFHERAEEPLDLSGAEND*
LO132_1000147012	3300002465	Freshwater Lake	VSSDVWQARIDLCVDKESKTYWIMLRLRSDSGEEKRHMSVLIPKGALSEAVERASRMEEKGLKERSGEPADLPEDQDD*
LO132_100093992	3300002465	Freshwater Lake	VPRRDALVGKTEGGSELSTDVWQARIDLCVDKESKTYWIMLRLRSDSGDEKKHMSILVPKTALSEALQRASDFEKKGFHEKAEEPPDLPEAEND*
LO132_100105515	3300002465	Freshwater Lake	MSSDVWQARIDLCVDKEAKTYWIMLRLRNDSADEKKHMSILIPKAALSDAIQRASGLEEKGLHEKSEEPTELPENEDD*
Ga0116138_10870711	3300009552	Peatland	LSSDVWQARIDLCVDKESKAYWIMLRLRSDSGEEKKHMSILIPKTALSDALQRASDFEEKGFHEKAEEPPDLSEAESD*
Ga0116138_11572162	3300009552	Peatland	DLCVDKESKTYWIMLRLRSDSGEEKKHMSILIPKTALSDALQRASDFEEKGFHEKAEELPDLPQTDSD*
Ga0116104_10057573	3300009614	Peatland	LSSDVWQARIDLCVDKEFKAYWIMLRLRSDSGEEKKHMSILIPKTALSDALQRASDFEEKGFHEKAEEPPDLSEAESD*
Ga0116202_1000056718	3300010302	Anoxic Lake Water	LSSDVWQARLDLCVDKESKTYWIMLRLRSDSGEEKKHMSILIPKTALSDALQRASSFEEKGFHERAEELPDLPEAEGD*
Ga0116202_100149615	3300010302	Anoxic Lake Water	MSSDVWQARIDLCVDKESKTYWIMLRLRNDSGDEKKHMSILVPKAALSEALERASRFEEKGLREKQEPTDLPEDQED*
Ga0116202_104989451	3300010302	Anoxic Lake Water	LSSDVWQARIDLCVDKESKTYWIMLRLRSDSGDEKKHMSILVPKTALSEALQRASGFEEKGFHEKAEELPDLPEAESD*
Ga0136653_1000009130	3300010319	Anoxic Lake Water	VSSDVWQARIDLCVDKESKTYWVMLRLRSDSGDEKKHMSILLPKAALSEALERASRLEEKGLSEKQEPADLPEDQED*
Ga0136653_100216853	3300010319	Anoxic Lake Water	MSSDVWQARIDLCIDKESKTYWIMLRLRNDSGDEKKHMSILVPKAALSEALERASRFEEKGLREKQEPTDLPEDQED*
Ga0129297_1000039020	3300010324	Lake Sediment	LGIALGGCDVSSDVWDARIDLCVDKESNAYWIMLRLRNNSQDEKKHMSVLMPKAALAEALERASRLEEKGLRERSEQPTELLETKGD*
Ga0129297_100039943	3300010324	Lake Sediment	VVLGGSDVSSDIWQARIDLCVEKESKEYWIMLRLRNDSGDEKKHMSILLPKAALAEALERASSFEEKGLHERLRERADLPETRGG*
Ga0129297_100178953	3300010324	Lake Sediment	VSSDIWQARIDLCVDKESSTYWILLRLRNDSGDEKKHMSILMPKAALAEALERASRFEEKGLRERTEEPPVS*
Ga0129297_100311752	3300010324	Lake Sediment	LSSDVWQARIDLCVDKESKTYWIMLRLRNDSGDEKKHMSVLMPKTALSEALERASSLEEEGLHEKQEPADLPETHDD*
Ga0129297_100442563	3300010324	Lake Sediment	LSSDVWQARIDLCVDKESKTYWIMLRLRNDSGDEKKHMSVLMPKTALSEALERASTLEEKGLHEKQQPADLAERHDD*
Ga0129297_100463272	3300010324	Lake Sediment	MSSDVWQARIDLCVDKEAKTYWIMLRLRNDSADEKKHMSILIPKVALSDAIQRASGLEEKGLHEKSEEPADLPEDEDD*
Ga0129297_100718402	3300010324	Lake Sediment	LSSDVWQARIDLCVDKESKTYWIMLRLRNDSGDEKKHMSVLMPKTALSEALERAATLEEKGLHEKQEPADLPETHDD*
Ga0129297_100788363	3300010324	Lake Sediment	VSSDIWQARIDLCVDKESNTYWILLRLRNDSGDEKKHMSILMPKAALAEALERASRFEEKGLRERTEEPPIS*
Ga0129297_101390871	3300010324	Lake Sediment	VSSDIWQARIDLCVDKESNTYWILLRLRNDSGDEKKHMSILMPKTALAEALERASRFEEKGLRERTEEPPVS*
Ga0129297_102434211	3300010324	Lake Sediment	VALGGADVASDVWQARIDLCVDKESKTYWIMLRLRNDSGDEKKHMSVLMPKSALGEALERASRLEEKGLRERSEESADLPDTEGD*
Ga0129297_103908632	3300010324	Lake Sediment	VSSDVWQARIDLCVDKESNTYWILLRLRNDSGDEKKHMSILMPKAALAEALERASRFEEKGLRERTEEPPVS*
Ga0129297_104440191	3300010324	Lake Sediment	VSSDIWQARIDLCADKESNTYWILLRLRNDFGDEKKHMSILMPKAALAEALERASRFEEKGLRERTEEPPVS*
Ga0129298_100989941	3300010328	Lake Sediment	VVLGGSDVSSDIWQARIDLCVEKESKEYWIMLRLRNDSGDEKKHMSILLPKAALAEALERASSFEEKGLHERLR
Ga0129298_101422982	3300010328	Lake Sediment	VSSDIWQARIDLCVDKESNTYWILLRLRNDSGDEKKHMSIMMPKAALAEALERASRFEERGLRERTEEPPVS*
Ga0129298_104817591	3300010328	Lake Sediment	LSSDVWQARIDLCVDKESRTYWIILRLRNDSGDEKKHMSVLIPKAAISEALERASSLEEKGLHEKQEPADVAETPDE*
Ga0129298_105487342	3300010328	Lake Sediment	SNLSSDVWQARIDLCVDKESKTYWIMLRLRNDSGDEKKHMSVLMPKTSLSEALERASSLEEEGLHEKQEPADLPETHDD*
Ga0153915_102289461	3300012931	Freshwater Wetlands	LSSDVWQARIDLCVDKESKAYWIMLRLRSDSGDEKKHMSILIPKTALSDALQRASDFEEKGFHEKAEEPPDLPETEGD*
Ga0153915_104875582	3300012931	Freshwater Wetlands	MSSDVWQARIDLCVDKEAKTYWIMLRLRNDSADEKKHMSILIPKAALSDAIQRASGLEEKGLSEKTEEPADLPEDD*
Ga0153915_114077332	3300012931	Freshwater Wetlands	MRSKWFLTKWILLSARPDVLVGKGDRGSELSSDVWQARIDLCVDKESKTYWIMLRLRSDSGEEKKHMSILIPKTALSDALQRASNFEEKGFHEKAEELADLSQADSD*
Ga0153915_123126361	3300012931	Freshwater Wetlands	LCVDKESKIYWIMLRLRSDSGDEKKHMSILVPKTALSEALQRASGFEEKGFHEKAEEPPDLPEAESD*
Ga0153916_104578882	3300012964	Freshwater Wetlands	MDSLSASLDVLVGKTGGGSELSSDIWQARIDLCVDKESKTYWIMLRLRSDSGDEKKHMSILIPKMALSDTLQRVSNFEEKGFHEKAEEPPDLSTAESD*
Ga0153916_105986433	3300012964	Freshwater Wetlands	DLCVDKEAKTYWIMLRLRNDSPDEKKHMSILIPKAALSDAIQRASGLEEKGLHEKPEEPTDLPEDDD*
Ga0153916_107154661	3300012964	Freshwater Wetlands	MSSDVWQARIDLCVDKEAKTYWIMLRLRNDSADEKKHMSVLIPKAALSDAIQRASDLEEKGLNEKSEEPPDLPEDD*
Ga0153916_108126161	3300012964	Freshwater Wetlands	LSSDVWQARIDLCVDKESKTYWVMLRLRSDSGEEKKHMSILIPKTALSDALQRASNFEEKGFHEKAEELPELPQTDSD*
Ga0153916_114413441	3300012964	Freshwater Wetlands	MSSDVWQARIDLCVDKEAKTYWIMLRLRNDSADEKKHMSILIPKAALSDAIQRASGLEEKGLHEKTEEPADLPEDEDD*
Ga0153916_124675211	3300012964	Freshwater Wetlands	KESKTYWIMLRLRSDSGEEKKHMSILIPKTALSDALQRASNFEEKGFHEKAEELADLSQADSD*
Ga0153916_130474331	3300012964	Freshwater Wetlands	MSSDVWQARIDLCVDKESKTYWIMLRLRSDSGDEKKHMSILVPKAALSEALERASRFEEKGLHEKQEPTDLPEDQED*
Ga0163209_11059712	3300013090	Freshwater	LSSDVWQARIDLCVDKESKTYWVMLRLRNNSGEEKRHMSVLIPKTALSEALERASSLEEKGLHEKQEPPDLPDTQED*
(restricted) Ga0172363_109604741	3300013130	Sediment	LSSDVWQARIDLCVDKEAKTYWIMLRLRSDSGEEKKHMTILVPKTALSEALQRASNFEEKGFREKAEELPDLPQVDSD*
Ga0187775_102939631	3300017939	Tropical Peatland	LSSDVWQARIDLCVDKESKKYWIMLRLRSDSGDEKKHMSILIPKTALSDALQRASSFEEKGFNE
Ga0187775_104457142	3300017939	Tropical Peatland	LSSDVWQARIDLCVDKESKTYWIMLRLRSDSGEEKKHMSILIPKTALSDALQRASNFEEKGFHEKAEELPDLSQADSD
Ga0187776_100527701	3300017966	Tropical Peatland	LSSDVWQARIDLCVDKESKSYWILLRLRSDSGDEKKNMSILIPKTALSDALQRASNFEEKGFHEKAEEPPDLSGAEND
Ga0187776_105227861	3300017966	Tropical Peatland	KIDGGSELSSDVWQARIDLCVDKESKKYWIMLRLRSDSGDEKKHMSILIPKTALSDALQRASSFEEKAFNERAEEPPDLSSAEDD
Ga0187776_105510032	3300017966	Tropical Peatland	LSSDLWEARIDLCVDKESKKYWIMLRLRSDSGDEKKHMSILIPKAALSDALQRASDFEEKGFLERTEEPPDLAGAE
Ga0187776_107736501	3300017966	Tropical Peatland	DLCVDKESKSYWIMLRLRSDSGDEKKHMSILIPKTALSDALQRASDFEEKGFHEKPEEPPDLSGAEND
Ga0187878_100023524	3300018005	Peatland	LSSDVWQARIDLCVDKEFKAYWIMLRLRSDSGEEKKHMSILIPKTALSDALQRASDFEEKGFHEKAEEPPDLSEAESD
Ga0187882_10082996	3300018021	Peatland	LSSDIWQARIDLCVDKESKTYWIMLRLRSDSGDEKKHMSILIPKTALSDALQRASDFEGKGFHERAEEPPDLPEAEGD
Ga0184616_102568682	3300018055	Groundwater Sediment	CVDKESKTYWIMLRLRSDSGDEKRHMSILIPKTALSDALQRASNFEEKGFHERAEEPPDLPEAEGD
Ga0187773_101879781	3300018064	Tropical Peatland	LSSDVWQARIDLCVDKESKAYWIMLRLRSDSGDEKKHMSILIPKTALSDALERASNFEEKGFHEKAEEPPDLPETEGD
Ga0187773_104552501	3300018064	Tropical Peatland	LSSDVWQARIDLCVDKESKTYWIMLRLRSASGEEKKHMSILIPQTALSDALQRASNFEEKGFHEKTEELPDLPQTDSD
Ga0187773_110187312	3300018064	Tropical Peatland	SDVWEARIDLCVDKESKTYWIMLRLRSDSGEEKKHMSILIPKTALSEALQRASNFEEKGFHEKAEELPDLPQVDTD
Ga0187771_101730033	3300018088	Tropical Peatland	RIDLCVDKNSKEYWVMLRLRNDSGDEKKHMSILIPKAALSDALQRASDFEEKGFHERTEEPPDLAQAQSD
Ga0187771_109179121	3300018088	Tropical Peatland	LSSDVWQARIDLCVDKESKSYWILLRLRSDSGDEKKNMSILIPKTALSDALQRASNFEEKGFHEKAEEPPDLSGVEND
Ga0187774_100806001	3300018089	Tropical Peatland	LSSDVWQARIDLCVDKESKSYWILLRLRSDSGDEKKNMSILIPKTALSDALQRASNFEEKGFHEKAEEPPDLSGTEND
Ga0187774_102606992	3300018089	Tropical Peatland	LSSDVWQARIDLCVDKESKKYWIMLRLRSDSGDEKKHMSILIPKTALSEALQRASSFEEKGFNERAEEPPDLSAAEDD
Ga0187774_105174531	3300018089	Tropical Peatland	KTDGGSELSSDVWQARIDLCVDKESKKYWIMLRLRSDSGDEKKHMSILMPKTALSDALQRASNFEEKGFHERAEEPPELPGAGND
Ga0187774_114401922	3300018089	Tropical Peatland	CVDKESKKYWIMLRLRSDSGDEKKHMSILIPKTALSDALQRASNFEEKGFQERAEEPPDLSGDEND
Ga0224506_102293371	3300022221	Sediment	LSSDVWQARIDLCVDKESKTYWIMLRLRNDSGDEKKHMSVLIPKAALSEALERASSLEEKGLHEKQEPADLPETPDD
Ga0212089_1000039722	3300022551	Lake Sediment	LSSDVWQARIDLCVDKESKTYWIMLRLRNDSGDEKKHMSVLMPKTALSEALERASTLEEKGLHEKQQPADLAERHDD
Ga0212089_100007813	3300022551	Lake Sediment	VSSDIWQARIDLCVEKESKEYWIMLRLRNDSGDEKKHMSILLPKAALAEALERASSFEEKGLHERLRERADLPETRGG
Ga0212089_1000114718	3300022551	Lake Sediment	VSSDIWQARIDLCVDKESSTYWILLRLRNDSGDEKKHMSILMPKAALAEALERASRFEEKGLRERTEEPPVS
Ga0212089_100134853	3300022551	Lake Sediment	VSSDVWDARIDLCVDKESNAYWIMLRLRNNSQDEKKHMSVLMPKAALAEALERASRLEEKGLRERSEQPTELLETKGD
Ga0212089_100201097	3300022551	Lake Sediment	VSSDIWQARIDLCVDKESNTYWILLRLRNDSGDEKKHMSVLMPKAALAEALERASRFEEKGLRERTEERAVS
Ga0212089_100205332	3300022551	Lake Sediment	LSSDVWQARIDICVDKESRTYWIMLRLRNDSGDEKKHMSVLIPKTALSEALERASSLEEKGLHEKQEPTDLTETPDD
Ga0212089_100233373	3300022551	Lake Sediment	VSSDIWQARIDLCVDKESNTYWILLRLRNDSGDEKKHMSILMPKAALAEALERASRFEEKGLRERTEEPPIS
Ga0212089_100285305	3300022551	Lake Sediment	LSSDVWQARIDLCVDKESKTYWIMLRLRNDSGDEKKHMSVLMPKTALSEALERASSLEEEGLHEKQEPADLPETHDD
Ga0212089_100338233	3300022551	Lake Sediment	LSSDVWQARIDLCVDKESRTYWIMLRLRNDSGDEKKHMSVLIPKAALSEALERASSLEEKGLHEKQEPTDLLGTPDD
Ga0212089_100370132	3300022551	Lake Sediment	VSSDVWQARIDLCVDKESNTYWILLRLRNDSGDEKKHMSILMPKAALAEALERASRFEEKGLRERTEESPVS
Ga0212089_100420174	3300022551	Lake Sediment	VSSDIWQARIDLCVDKESNTYWILLRLRNDSGDEKKHMSILMPKAALAEALERASRFEEKGLRERTEEPPVS
Ga0212089_100421123	3300022551	Lake Sediment	LSSDVWQARIDLCVDKESKTYWIMLRLRNDSGDEKKHMSVLMPKTALSEALERAATLEEKGLHEKQEPADLPETHDD
Ga0212089_100687603	3300022551	Lake Sediment	VSSDIWQARIDLCVDKESNTYWILLRLRNDSGDEKKHMSILMPKTALAEALERASRFEEKGLRERTEEPPVS
Ga0212089_100725361	3300022551	Lake Sediment	LSSDVWQARIDICVDKESRTYWIMLRLRNDSGDEKKHMSVLIPKAALSEALERATSLEEKGLHEKQEPTDLTETPDD
Ga0212089_101173592	3300022551	Lake Sediment	MSSDVWQARIDLCVDKEAKTYWIMLRLRNDSADEKKHMSILIPKVALSDAIQRASGLEEKGLHEKSEEPADLPEDEDD
Ga0212089_101520021	3300022551	Lake Sediment	VSSDVWDARIDLCVDKESNAYWIMLRLRNNSQDEKKHMSVLMPKVALAEALERASRLEEQGLRERPEKPTEFPETEDD
Ga0212089_101755361	3300022551	Lake Sediment	LSSDLWQARIDLCVDKESKNYWIMLRLRNDSGDEKKHMSVLIPKAALSEALERASSLEGKGLREKQESADFPETEPD
Ga0212089_102236331	3300022551	Lake Sediment	LSSDVWQARIDLCVDKESRTYWIMLRLRNDFGDEKKHMSVLIPRAALSEALERASSLEEKGLHEKQEPTDLAETPDD
Ga0212089_102661832	3300022551	Lake Sediment	LSSDVWQARIDLCVDKESRTYWIMLRLRNDSGDEKKHMSVLIPKAAISEALERASSLEEKGLHEKQEPADVAETPDE
Ga0212124_100571731	3300022553	Freshwater	LSSDVWQARIDLCVDKESKTYWIMLRLRSDSGDEKKHMSILIPKTALSDALQRASNFDEKGFHERAEEPPDLLEAEGD
Ga0212124_101140992	3300022553	Freshwater	LSSDVWQARIDLCVDKESKTYWIMLRLRSDSGDEKKHMSILIPRTALSDALQRASNFEEKGFHERAEEPPDLPEAEGD
Ga0212121_100009165	3300022556	Anoxic Lake Water	LSSDVWQARLDLCVDKESKTYWIMLRLRSDSGEEKKHMSILIPKTALSDALQRASSFEEKGFHERAEELPDLPEAEGD
Ga0212121_100020538	3300022556	Anoxic Lake Water	VSSDVWQARIDLCVDKESKTYWVMLRLRSDSGDEKKHMSILLPKAALSEALERASRLEEKGLSEKQEPADLPEDQED
Ga0212121_100045176	3300022556	Anoxic Lake Water	MSSDVWQARIDLCIDKESKTYWIMLRLRNDSGDEKKHMSILVPKAALSEALERASRFEEKGLREKQEPTDLPEDQED
Ga0212121_103350492	3300022556	Anoxic Lake Water	DLSSDVWQARIDLCVDKESKTYWVMLRLRNDSGEEKRHMSVLIPKTALSEALERASSLEEKGLHEKQEPPDLPDTQED
Ga0212121_104231892	3300022556	Anoxic Lake Water	LSSDVWQARIDLCVDKESKTYWIMLRLRSDSGDEKKHMSILVPKTALSEALQRASGFEEKGFHEKAEELPDLPEAESD
Ga0212121_109117092	3300022556	Anoxic Lake Water	LSASSDVLAGKTDGGSELSSDVWQARIDLCVDKESKKYWIMLRLRSDSGDEKKHMSILIPKTALSDALQRASDFEEKGFHERAEQPPDLSGAEND
Ga0209610_10344693	3300025136	Anoxic Lake Water	YCVLVSALLGGSIMSSDVWQARIDLCIDKESKTYWIMLRLRNDSGDEKKHMSILVPKAALSEALERASRFEEKGLREKQEPTDLPEDQED
Ga0209314_100024478	3300025143	Lake Sediment	VSSDVWQARIDLCVDKESNTYWILLRLRNDSGDEKKHMSILMPKAALAEALERASRFEEKGLRERTEEPPVS
Ga0209314_102353681	3300025143	Lake Sediment	VSSDIWQARIDLCVDKESNTYWILLRLRNDSGDEKKHMSVLMPKAALAEALERASRFEEKGLRERTEE
Ga0209725_11433591	3300025144	Lake Sediment	LSSDVWQARIDLCVDKESRTYWIMLRLRNDSGDEKKHMSVLIPKAAISEALERASSLEEKGIHEKQEPADVSETPDD
Ga0209521_103877112	3300025164	Soil	QVPRRDALVGKTEGGSELSTDVWQARFDLCVDKESKTYWIMLRLRSDSGDEKKHMSILVPKTALSEALQRASDFEKKGFHEKAEEPPDLPEAEND
Ga0208321_10014027	3300025409	Peatland	LSSDVWQARIDLCVDKESKAYWIMLRLRSDSGEEKKHMSILIPKTALSDALQRASDFEEKGFHEKAEEPPDLSEAESD
Ga0208039_10736751	3300025454	Peatland	DLCVDKESKTYWIMLRLRSDSGEEKKHMSILIPKTALSDALQRASDFEEKGFHEKAEELPDLPQTDSD
(restricted) Ga0233416_100850911	3300027799	Sediment	LSTDVWQARIDLCVDKESKTYWIMLRLRSDSGDEKKHMSILVPKTALTEAIQRASGFEEKGFHEKAEEPADLPDANSE
Ga0256868_102331171	3300027811	Soil	MSSDVWQARIDLCVDKESKTYWIMLRLRSDSGDEKKHMSILVPKAALSEALDRASRFEEKGLHEKQEPTDLPEDQED
Ga0209048_102393621	3300027902	Freshwater Lake Sediment	LSSDVWQARIDLCVDKESKTYWIMLRLRSDSGDEKKHMSILIPKTALSDALQRASNFEEKGFHERAEEPPDLPEAEGD
Ga0299915_104044472	3300030613	Soil	LSSDVWQARIDLCVDKESKTYWIMLRLRSDSGEEKKHMSILIPKTALSDALQRASNFEEKGFHEKAEELADLSQADSD
(restricted) Ga0315308_11584652	3300031587	Sediment	LSSDVWQARIDLCVDKESRTYWIMLRLRNDSGDEKKHMSVLIPKAALSEALERASSLEEKGLHEKQEPTDLAETPDD
Ga0315291_100222688	3300031707	Sediment	LSSDVWQARIDLCVDKESKAYWIMLRLRSDSGDEKKHMSILIPKIALSDALQRASNFEEKGFHERAEEPPDLPEAEGD
Ga0315291_102078772	3300031707	Sediment	LSSDVWQARIDLCVDKESKTYWIMLRLRSDSGEEKKHMSILIPKTALSDALERASNFEEKGFHEKAEELADLSQADSD
Ga0315291_102274353	3300031707	Sediment	VDKESKTYWIMLRLRSDSGDEKKHMSILIPKTALSDALQRASNFDEKGFHERAEEPPDLPEAEGD
Ga0315291_105163363	3300031707	Sediment	VDKESKTYWIMLRLRSDSGDEKKHMSILIPKTALSDALQRASNFDEKGFRERAEEPPDLLEAEGD
Ga0315293_1000417114	3300031746	Sediment	MSSDVWQARIDLCVDKESKTYWIMLRLRSDSGDEKKHMSILVPKAALSEALDRASRFEEKGLHEKQEPTDLPQDQED
Ga0315293_103764221	3300031746	Sediment	LSSDVWQARIDLCVDKESKTYWIMLRLRSDSGDEKKHMSILIPKTALSDALQRASNFDEKGFHERAEEPP
Ga0315288_102584181	3300031772	Sediment	LSSDVWQARIDLCVDKESKAYWIMLRLRSDSGDEKKHMSILIPKIALSDALQRASNFEEKGFHERAEEPPDLPE
Ga0315288_103525122	3300031772	Sediment	LSSDVWQARIDLCVDKESKTYWIMLRLRSDSGDEKKHMSILIPKTALSDALQRASNFDEKGFHERAEEPPDLPEAEGD
Ga0315288_105908841	3300031772	Sediment	LSSDVWQARIDLCVDKESKTYWIMLRLRSDSGDEKKHMSILIPKTALSDALQRASNFEEKGFHERAEELPDLPEAEGD
(restricted) Ga0315306_102090052	3300031806	Sediment	VWQARIDLCVDKESNTYWILLRLRNDSGDEKKHMSILMPKAALAEALERASRFEEKGLRERTEEPPVS
Ga0315280_1000119940	3300031862	Sediment	LSSDIWQARIDLCVDKESKTYWIMLRLRSDSGDEKKHMSILIPKTALSDALQRASSFEEKGFHERAEEPPDLPEAEGD
Ga0315280_100190187	3300031862	Sediment	LSSDVWQARIDLCVDKESKIYWIMLRLRSDSGDEKKHMSILVPKTALSEALQRASGFEEKGFHEKAEEPPDLPEAESD
Ga0315280_100437244	3300031862	Sediment	LSSDVWQARIDLCVDKESRTYWIMLRLRNDSGDEKKHMSVLIPKAALSEALERTSSLEEKGLHEKQEPADLPETPDD
Ga0315280_101317942	3300031862	Sediment	LSSDVWQARIDLCVDKESKTYWIVLRLRSDSGEEKKHMSILIPKTALSDALQRASNFEEKGFHEKAEELADLSQADSD
Ga0315280_101602541	3300031862	Sediment	LSSDVWQARIDLCVDKESRTYWIMLRLRNDSGDEKKHMSVLIPKAALSEALERASSLEEKGLHEKQEPADLPETPDD
Ga0315280_103216941	3300031862	Sediment	QARIDLCVDKESKTYWIMLRLRSDSGEEKKHMSILIPKTALSDALQRASNFEEKGFQEKAEELPDLPQAESD
(restricted) Ga0315310_102134711	3300031876	Sediment	VSSDIWQARIDLCVDKESSTYWILLRLRNDSGDEKKHMSILMPKAALAEALERASRFEEKGLRERTEE
(restricted) Ga0315314_1000019159	3300031877	Sediment	LSSDVWQARIDLCVDKESRTYWIMLRLRNDFGDEKKHMSVLIPKAALSEALERASSLEEKGLHEKQEPTDLAETPDD
(restricted) Ga0315314_100236710	3300031877	Sediment	LSSDLWQARIDLCVDKESKTYWIMLRLRNDSGDEKKHMSVLIPKAALSEALERASSLEGKGLHEKQEPADFPETEPD
(restricted) Ga0315314_10989302	3300031877	Sediment	VDSEVWQARIDLCVDKESKTYWIMLRLRNDSGDEKKHMSVLMPKSALGEALERASRLEEKGLRERSEESADLPDTEGD
(restricted) Ga0315312_11170301	3300031898	Sediment	VALGGADVASDVWQARIDLCVDKESKTYWIMLRLRNDSGDEKRHMSVLMPKSALGEALERASRLEEKGLRERSEESADLPDTEGD
Ga0315296_100226071	3300032020	Sediment	LSADIWQARIDLCIDKESKTYWIMLRLRSDSGDEKKHMSILIPKTALSEALQRASGFEEKGFHEKAEEPPELPEAEDD
Ga0315296_102170592	3300032020	Sediment	GKTEGGSELSADIWQARIDLCIDKESKAYWIMLRLRSDSGDEKKHMSILIPKTALSEALQRASGFEEKGFHEKGEEPPDLPETEND
Ga0315296_102502901	3300032020	Sediment	MSSDVWQARIDLCVDKESKTYWIMLRLRNDSGDEKKHMSILVPKAALSEALERASRFEEKGLHEKQEPTDLPEDQED
Ga0315282_1000102424	3300032069	Sediment	LSSDVWQARIDLCVDKESKAYWIMLRLRSDSGDEKKHMSILVPKIALSDALQRASNFEEKGFHERAEELPDLPEAEGD
Ga0315282_100348182	3300032069	Sediment	LSSDVWQARIDLCVDKEFKTYWIVLRLRSDSGEEKKHMSILIPKTALSDALQRASNFEEKGFHEKAEELADLSQADSD
Ga0315282_101801272	3300032069	Sediment	LSSDIWQARIDLCVDKESKTYWIMLRLRSDSGDEKKHMSILIPKTALSDALQRASNFDEKGFHERAEEPPDLLEAEGD
Ga0315282_101865372	3300032069	Sediment	LSADVWQARIDLCVDKESKNYWIMLRLRSDSGNEKKHMSILIPKTALSDALQRASNFEEKGFHERAEEPPDLPEAEGD
Ga0315279_105148001	3300032070	Sediment	LSSDVWQARIDLCVDKESKAYWVMLRLRSDSGEEKKHMSILIPKTALSDALQRASNFEEKGFHEKAEELPELPQTDSD
Ga0315295_121788111	3300032156	Sediment	LSSDVWQARIDLCVDKESKTYWIMLRLRNDSKEEKKHMSVMLPKTALSEALQRVSNFEEKGFQEK
Ga0315281_105016671	3300032163	Sediment	LSSDVWQARIDLCVDKESKTYWIVLRLRSDSGEEKKHMSILIPKTALSDALERASNFEEKGFHEKAEELADLSQADSD
Ga0315268_1000066811	3300032173	Sediment	LSSDVWQARIDLCVDKESKKYWIMLRLRSDSGDEKKHMSILIPKTALSDALQRASDFEEKGFHERAEEPPDLSGAENE
Ga0315268_100067795	3300032173	Sediment	LSSDVWQARIDLCVDKESKTYWIMLRLRSDSGDEKKHMSILIPKTALSDAIQRASSFEEKGFHEKAEEPPDLSGAESD
Ga0315268_102158352	3300032173	Sediment	LSSDVWQARIDLCVDKESKTYWIMLRLRSDSGDEKKHMSILIPKTALSDALQRASNFEEKGFHEKAEEPPDLPEAEGD
Ga0315268_102346912	3300032173	Sediment	LSSDVWQARMDLCVDKESKTYWIMLRLRSDSSDEKKHMSILIPKTALSDALQRASNFEEKGFHERAEEPPDLPEAESD
Ga0315268_103860231	3300032173	Sediment	LSSDVWQARIDLCVDKESKAYWIMLRLRSDSGDEKKHMSILVPKIALSDALQRASNFEEKGFHERAEEPPDLPEAEGD
Ga0315268_105576861	3300032173	Sediment	LSSDVWQARIDLCVDKESKTYWVMLRLRSDSGEEKKHMSILIPKTAISDALQRASNFEEKGFHEKAEELPDLPQTDSD
Ga0315268_118459701	3300032173	Sediment	LSSDVWQARIDLCVDKESKTYWIMLRLRSDSGEEKKHMSILIPKTALSDALQRASNFEEKGFHEKTEELPD
Ga0315275_103528413	3300032401	Sediment	LSSDVWQARIDLCVDKESKTYWIMLRLRSDSGDEKKHMSILIPKTAISDALQRASNFEEKGFHERAEEPPDLPEAEGD
Ga0335070_109362351	3300032829	Soil	KRSPPEWILLSARPDVLVGKTDGGSELSSDIWQARIDLCVDKESKTYWVMLRLRSDSGEEKKHMSILIPKTALSDALQRASNFEEKGFHEKAEELPDLPQTDGD
Ga0316624_106233691	3300033486	Soil	LSSDVWQARIDLCVDKESKAYWIMLRLRSDSGDEKKHMSILIPKTALSDALQRASDFEEKGFHEKAEEPPDLPETEGD
Ga0316628_1032088001	3300033513	Soil	VSSDVWQARIDLCVDKESKAYWIMLRLRSDSGEEKKHMSVLIPKGALSEAIERAAHLEEKGLRERSGEPADLPEDQDD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters