Metagenome / Metatranscriptome Family F052318

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052318
Family Type	Metagenome / Metatranscriptome
Number of Sequences	142
Average Sequence Length	58 residues
Representative Sequence	MDPQAHGYTVVAFHPESKGIVIYFVPKDGSGKGIVLNINHDIVPQAIGNTLTGVSTDKE
Number of Associated Samples	83
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	18.12 %
% of genes near scaffold ends (potentially truncated)	52.82 %
% of genes from short scaffolds (< 2000 bps)	97.18 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (91.549 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere (76.056 % of family members)
Environment Ontology (ENVO)	Unclassified (90.141 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (83.803 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.20% β-sheet: 22.99% Coil/Unstructured: 67.82%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF00665	rve	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.70
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.70
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.70
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.70

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.55 %
All Organisms	root	All Organisms	8.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.55 %
cellular organisms	root	All Organisms → cellular organisms	8.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.55 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	8.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.55 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	8.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.55 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	8.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.55 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	8.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.55 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	8.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.55 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	8.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.55 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	8.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.55 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	8.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.55 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	8.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.55 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	8.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.55 %
Liliopsida	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida	8.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.55 %
Petrosaviidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae	8.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.55 %
commelinids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids	8.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.55 %
Poales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales	8.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.55 %
Poaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	8.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.55 %
PACMAD clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade	5.63 %
BOP clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → BOP clade	1.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.55 %
Panicoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	4.93 %
Oryzoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → BOP clade → Oryzoideae	1.41 %
Chloridoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Chloridoideae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.55 %
Panicodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae	4.93 %
Oryzeae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → BOP clade → Oryzoideae → Oryzeae	1.41 %
Eragrostideae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Chloridoideae → Eragrostideae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.55 %
Paniceae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae	4.93 %
Oryzinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → BOP clade → Oryzoideae → Oryzeae → Oryzinae	1.41 %
Eragrostidinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Chloridoideae → Eragrostideae → Eragrostidinae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.55 %
Panicinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae	4.93 %
Oryza	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → BOP clade → Oryzoideae → Oryzeae → Oryzinae → Oryza	1.41 %
Eragrostis	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Chloridoideae → Eragrostideae → Eragrostidinae → Eragrostis	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.55 %
Panicum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	4.93 %
Oryza sativa	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → BOP clade → Oryzoideae → Oryzeae → Oryzinae → Oryza → Oryza sativa	0.70 %
Eragrostis curvula	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Chloridoideae → Eragrostideae → Eragrostidinae → Eragrostis → Eragrostis curvula	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.55 %
Panicum sect. Hiantes	section	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes	3.52 %
Panicum miliaceum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	1.41 %
Oryza sativa	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → BOP clade → Oryzoideae → Oryzeae → Oryzinae → Oryza → Oryza sativa	0.70 %
Eragrostis curvula	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Chloridoideae → Eragrostideae → Eragrostidinae → Eragrostis → Eragrostis curvula	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.55 %
Panicum virgatum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	3.52 %
Panicum miliaceum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	1.41 %
Oryza sativa	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → BOP clade → Oryzoideae → Oryzeae → Oryzinae → Oryza → Oryza sativa	0.70 %
Eragrostis curvula	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Chloridoideae → Eragrostideae → Eragrostidinae → Eragrostis → Eragrostis curvula	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005355\|Ga0070671_102024729	Not Available	513	Open in IMG/M
3300005406\|Ga0070703_10594878	Not Available	510	Open in IMG/M
3300005438\|Ga0070701_11358346	Not Available	510	Open in IMG/M
3300005468\|Ga0070707_100425932	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → BOP clade → Oryzoideae → Oryzeae → Oryzinae → Oryza → Oryza sativa	1287	Open in IMG/M
3300005544\|Ga0070686_100468710	Not Available	971	Open in IMG/M
3300005548\|Ga0070665_102234971	Not Available	551	Open in IMG/M
3300005615\|Ga0070702_101595764	Not Available	539	Open in IMG/M
3300005841\|Ga0068863_101254317	Not Available	747	Open in IMG/M
3300005843\|Ga0068860_101536028	Not Available	687	Open in IMG/M
3300005843\|Ga0068860_102213463	Not Available	571	Open in IMG/M
3300009973\|Ga0105136_113125	Not Available	518	Open in IMG/M
3300009981\|Ga0105133_119445	Not Available	592	Open in IMG/M
3300009989\|Ga0105131_137579	Not Available	533	Open in IMG/M
3300009994\|Ga0105126_1037874	Not Available	586	Open in IMG/M
3300010397\|Ga0134124_12081035	Not Available	606	Open in IMG/M
3300010400\|Ga0134122_11366221	Not Available	720	Open in IMG/M
3300014325\|Ga0163163_12712742	Not Available	552	Open in IMG/M
3300015270\|Ga0182183_1066467	Not Available	566	Open in IMG/M
3300015284\|Ga0182101_1025477	Not Available	786	Open in IMG/M
3300015284\|Ga0182101_1065975	Not Available	583	Open in IMG/M
3300015290\|Ga0182105_1064656	Not Available	604	Open in IMG/M
3300015290\|Ga0182105_1067182	Not Available	597	Open in IMG/M
3300015290\|Ga0182105_1079073	Not Available	564	Open in IMG/M
3300015293\|Ga0182103_1052688	Not Available	629	Open in IMG/M
3300015297\|Ga0182104_1097110	Not Available	545	Open in IMG/M
3300015306\|Ga0182180_1054745	Not Available	613	Open in IMG/M
3300015310\|Ga0182162_1048384	Not Available	719	Open in IMG/M
3300015310\|Ga0182162_1078301	Not Available	608	Open in IMG/M
3300015310\|Ga0182162_1092461	Not Available	572	Open in IMG/M
3300015311\|Ga0182182_1025457	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	856	Open in IMG/M
3300015311\|Ga0182182_1070648	Not Available	614	Open in IMG/M
3300015311\|Ga0182182_1117470	Not Available	510	Open in IMG/M
3300015312\|Ga0182168_1085504	Not Available	605	Open in IMG/M
3300015313\|Ga0182164_1056016	Not Available	704	Open in IMG/M
3300015313\|Ga0182164_1093318	Not Available	585	Open in IMG/M
3300015313\|Ga0182164_1104834	Not Available	559	Open in IMG/M
3300015313\|Ga0182164_1118631	Not Available	533	Open in IMG/M
3300015315\|Ga0182120_1073722	Not Available	643	Open in IMG/M
3300015315\|Ga0182120_1134555	Not Available	509	Open in IMG/M
3300015316\|Ga0182121_1023728	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	982	Open in IMG/M
3300015317\|Ga0182136_1124558	Not Available	529	Open in IMG/M
3300015318\|Ga0182181_1023770	Not Available	856	Open in IMG/M
3300015318\|Ga0182181_1091431	Not Available	547	Open in IMG/M
3300015318\|Ga0182181_1095711	Not Available	538	Open in IMG/M
3300015320\|Ga0182165_1095889	Not Available	597	Open in IMG/M
3300015324\|Ga0182134_1011073	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	1201	Open in IMG/M
3300015325\|Ga0182148_1073406	Not Available	653	Open in IMG/M
3300015325\|Ga0182148_1096978	Not Available	590	Open in IMG/M
3300015327\|Ga0182114_1072020	Not Available	697	Open in IMG/M
3300015328\|Ga0182153_1037994	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	835	Open in IMG/M
3300015328\|Ga0182153_1072444	Not Available	670	Open in IMG/M
3300015329\|Ga0182135_1056234	Not Available	740	Open in IMG/M
3300015329\|Ga0182135_1085357	Not Available	636	Open in IMG/M
3300015330\|Ga0182152_1078088	Not Available	659	Open in IMG/M
3300015331\|Ga0182131_1138818	Not Available	528	Open in IMG/M
3300015332\|Ga0182117_1085479	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	673	Open in IMG/M
3300015332\|Ga0182117_1111194	Not Available	604	Open in IMG/M
3300015333\|Ga0182147_1129686	Not Available	563	Open in IMG/M
3300015334\|Ga0182132_1012067	Not Available	1273	Open in IMG/M
3300015334\|Ga0182132_1026485	Not Available	1005	Open in IMG/M
3300015334\|Ga0182132_1104955	Not Available	615	Open in IMG/M
3300015334\|Ga0182132_1164438	Not Available	509	Open in IMG/M
3300015335\|Ga0182116_1015287	Not Available	1244	Open in IMG/M
3300015335\|Ga0182116_1054971	Not Available	816	Open in IMG/M
3300015335\|Ga0182116_1173554	Not Available	509	Open in IMG/M
3300015336\|Ga0182150_1076337	Not Available	684	Open in IMG/M
3300015336\|Ga0182150_1129948	Not Available	557	Open in IMG/M
3300015337\|Ga0182151_1065734	Not Available	722	Open in IMG/M
3300015337\|Ga0182151_1127892	Not Available	561	Open in IMG/M
3300015337\|Ga0182151_1150740	Not Available	524	Open in IMG/M
3300015337\|Ga0182151_1161731	Not Available	508	Open in IMG/M
3300015339\|Ga0182149_1044353	Not Available	857	Open in IMG/M
3300015339\|Ga0182149_1172764	Not Available	504	Open in IMG/M
3300015340\|Ga0182133_1044934	Not Available	897	Open in IMG/M
3300015340\|Ga0182133_1075510	Not Available	742	Open in IMG/M
3300015340\|Ga0182133_1108243	Not Available	644	Open in IMG/M
3300015340\|Ga0182133_1135895	Not Available	585	Open in IMG/M
3300015348\|Ga0182115_1091118	Not Available	950	Open in IMG/M
3300015348\|Ga0182115_1238791	Not Available	579	Open in IMG/M
3300015348\|Ga0182115_1247184	Not Available	568	Open in IMG/M
3300015349\|Ga0182185_1055048	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	1058	Open in IMG/M
3300015349\|Ga0182185_1136213	Not Available	725	Open in IMG/M
3300015349\|Ga0182185_1172400	Not Available	649	Open in IMG/M
3300015349\|Ga0182185_1207111	Not Available	594	Open in IMG/M
3300015350\|Ga0182163_1140408	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Chloridoideae → Eragrostideae → Eragrostidinae → Eragrostis → Eragrostis curvula	749	Open in IMG/M
3300015350\|Ga0182163_1208782	Not Available	612	Open in IMG/M
3300015350\|Ga0182163_1245809	Not Available	561	Open in IMG/M
3300015352\|Ga0182169_1177484	Not Available	696	Open in IMG/M
3300015352\|Ga0182169_1246395	Not Available	581	Open in IMG/M
3300015352\|Ga0182169_1264490	Not Available	558	Open in IMG/M
3300015352\|Ga0182169_1267200	Not Available	555	Open in IMG/M
3300015353\|Ga0182179_1187042	Not Available	656	Open in IMG/M
3300015353\|Ga0182179_1306914	Not Available	517	Open in IMG/M
3300015354\|Ga0182167_1084832	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	1144	Open in IMG/M
3300015354\|Ga0182167_1130039	Not Available	928	Open in IMG/M
3300015354\|Ga0182167_1313218	Not Available	555	Open in IMG/M
3300017408\|Ga0182197_1081518	Not Available	637	Open in IMG/M
3300017412\|Ga0182199_1129732	Not Available	603	Open in IMG/M
3300017412\|Ga0182199_1150679	Not Available	569	Open in IMG/M
3300017412\|Ga0182199_1153012	Not Available	565	Open in IMG/M
3300017414\|Ga0182195_1026383	Not Available	1094	Open in IMG/M
3300017414\|Ga0182195_1102358	Not Available	685	Open in IMG/M
3300017414\|Ga0182195_1162700	Not Available	571	Open in IMG/M
3300017414\|Ga0182195_1221284	Not Available	503	Open in IMG/M
3300017421\|Ga0182213_1243765	Not Available	515	Open in IMG/M
3300017422\|Ga0182201_1069954	Not Available	647	Open in IMG/M
3300017422\|Ga0182201_1130696	Not Available	521	Open in IMG/M
3300017432\|Ga0182196_1029682	Not Available	881	Open in IMG/M
3300017432\|Ga0182196_1103405	Not Available	582	Open in IMG/M
3300017445\|Ga0182198_1111927	Not Available	635	Open in IMG/M
3300017445\|Ga0182198_1196126	Not Available	509	Open in IMG/M
3300017447\|Ga0182215_1120252	Not Available	594	Open in IMG/M
3300017691\|Ga0182212_1144481	Not Available	541	Open in IMG/M
3300020223\|Ga0182118_108671	Not Available	597	Open in IMG/M
3300026088\|Ga0207641_12566931	Not Available	508	Open in IMG/M
3300028049\|Ga0268322_1031261	Not Available	617	Open in IMG/M
3300028053\|Ga0268346_1041419	Not Available	515	Open in IMG/M
3300028058\|Ga0268332_1010426	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → BOP clade → Oryzoideae → Oryzeae → Oryzinae → Oryza	980	Open in IMG/M
3300028058\|Ga0268332_1054469	Not Available	580	Open in IMG/M
3300028062\|Ga0268342_1023956	Not Available	622	Open in IMG/M
3300028064\|Ga0268340_1045691	Not Available	636	Open in IMG/M
3300028064\|Ga0268340_1070498	Not Available	543	Open in IMG/M
3300028064\|Ga0268340_1086995	Not Available	501	Open in IMG/M
3300028142\|Ga0268347_1018523	Not Available	612	Open in IMG/M
3300028248\|Ga0268312_1013569	Not Available	698	Open in IMG/M
3300028251\|Ga0268324_1026840	Not Available	500	Open in IMG/M
3300028262\|Ga0268310_1011970	Not Available	811	Open in IMG/M
3300028262\|Ga0268310_1050762	Not Available	508	Open in IMG/M
3300028474\|Ga0268331_1010612	Not Available	680	Open in IMG/M
3300028475\|Ga0268327_1027825	Not Available	502	Open in IMG/M
3300028523\|Ga0268313_1003554	Not Available	819	Open in IMG/M
3300032466\|Ga0214503_1030257	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	1539	Open in IMG/M
3300032466\|Ga0214503_1179496	Not Available	660	Open in IMG/M
3300032490\|Ga0214495_1152318	Not Available	511	Open in IMG/M
3300032502\|Ga0214490_1112625	Not Available	620	Open in IMG/M
3300032589\|Ga0214500_1025244	Not Available	1534	Open in IMG/M
3300032591\|Ga0214484_1104034	Not Available	582	Open in IMG/M
3300032761\|Ga0314733_1009445	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	1577	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	95.07%
Environmental	Environmental	4.93%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	95.07%
Terrestrial	Environmental → Terrestrial	4.93%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	87.32%
Soil	Environmental → Terrestrial → Soil	4.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.82%
Unclassified	Host-Associated → Plants → Unclassified	2.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.41%
Roots	Host-Associated → Plants → Roots	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	87.32%
Loam	Environmental → Terrestrial → Soil → Loam	3.52%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.82%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified	2.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.41%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.41%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	87.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.82%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified → Unclassified	2.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.41%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.70%

Habitat	Taxonomy	Distribution
Switchgrass Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere	76.06%
Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere	11.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.82%
Switchgrass Associated	Host-Associated → Plants → Unclassified → Unclassified → Unclassified → Switchgrass Associated	2.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.41%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.41%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300009973	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_222 metaG	Host-Associated	Open in IMG/M
3300009981	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_208 metaG	Host-Associated	Open in IMG/M
3300009989	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_197 metaG	Host-Associated	Open in IMG/M
3300009994	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_171 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015270	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015284	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015290	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015293	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015297	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015306	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015310	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015311	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015312	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015313	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015315	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015316	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015317	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015318	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015320	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015324	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015325	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015327	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015328	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015329	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015330	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015331	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015332	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015333	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015334	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015335	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015336	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015337	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015339	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015340	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015348	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015349	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015350	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015352	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015353	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015354	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017408	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017412	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017414	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017421	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017422	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017432	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017445	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017447	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017691	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300020223	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_31MAY2016_LD2 MG	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028049	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028053	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028058	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028062	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028064	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028142	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028248	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028251	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028262	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028474	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028475	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028523	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300032466	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_12SEP2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032490	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_12JUL2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032502	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032589	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_12SEP2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032591	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_31MAY2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032697	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_12SEP2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032761	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_26JUN2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032914	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_07AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070671_1020247291	3300005355	Switchgrass Rhizosphere	AHGYTVVAFHPESKGIVIYLVPKDGSNKGIVLNINHDIIPQAIGNTLTGVSPDKE*
Ga0070703_105948781	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	SRGIINTITDGPQAHGYTVVAFHPESKGIVIYFVPKDGSGKGIVLNINHDIVPQAIGNTLTGVSTDKE*
Ga0070701_113583461	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MDPQAHIYTIVAFHPESKGIIIYFVPKDGSGKYIVLNINHDIVPQVIGNALTGV
Ga0070707_1004259321	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MDPQAHGYTVVAFHPESKGIVIYLCPKGGSGKGIVLNINHDIVPQAIGNTLTGV
Ga0070686_1004687101	3300005544	Switchgrass Rhizosphere	MDPQAHGYTVVAFHPESKGIVIYFVPKDGSGKGIVLNINHDIVPQAIGNTLTGVSTDKE*
Ga0070665_1022349711	3300005548	Switchgrass Rhizosphere	MDPQAHGYTIVAFHPESKGIVIYLVPKDGSGKGIVLNINHDIVPQAIGNTLTGVSTDKE*
Ga0070702_1015957641	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MDPQAHGYTIVAFHPESKGIVIYFVPKDGSGKGIVLNINHDIVPQAIGNTLTGVSPDKE*
Ga0068863_1012543172	3300005841	Switchgrass Rhizosphere	MDPQAHGYTIIAFHQESKGIVIYLCPKGSSGKGIVLNINHDIVPQAIGNTLTGVSTDKE*
Ga0068860_1015360281	3300005843	Switchgrass Rhizosphere	MDPQAHGYTVVAFHPESKGIVIYFVPKDGSDKGIVLNINHDIVPQAIGNTLTGVSTDKE*
Ga0068860_1022134631	3300005843	Switchgrass Rhizosphere	MGPQAHGYMVVAFHSESKGIIIYLFPKGGSGKGTVLNINHDIVPQAIGKTLTG
Ga0105136_1131251	3300009973	Switchgrass Associated	YTIVAFHPESKGIVIYIVPKDGSGKGTVLNINHDIVPQAVGKTLTGVSQDKEISKGNAT*
Ga0105133_1194451	3300009981	Switchgrass Associated	HGYTVVAFHPESKGIVIYIFPKDGSGKDIILNINHNIVPQAIGRVLIGVSQDKRYKQG*
Ga0105131_1375791	3300009989	Switchgrass Associated	MDPQAHGYTVAAFHSESKGIVIYFVPKDDSGKGIVLKINHDIVPQAIGNTLKGVSPDKE*
Ga0105126_10378741	3300009994	Switchgrass Associated	VHEYTVVAFHPESTGIVIYIFPKDSSGKDTVLNINHDIVPQVIGKTLAGVSHKEDK*
Ga0134124_120810351	3300010397	Terrestrial Soil	MDPQAHGYTVVAFHPESKGIAIYIFPNDGSGKDIVLNINHDIMPQAIGKL*
Ga0134122_113662211	3300010400	Terrestrial Soil	MDPLVHGYTVVAFHPESKSIIIYLFPKDGSGKGNVLNINHDIVPQAIGNTLIGVSPSKE*
Ga0163163_127127422	3300014325	Switchgrass Rhizosphere	MGSASAQNTIVAFHLESKGIIIYIFPKDGSGKGIVLNINHDIVPQAIGRALTGVSHDKEISKG*
Ga0182183_10664671	3300015270	Switchgrass Phyllosphere	VHGYTIVAFYPESKSIVIYIFSKDGSDKGTILNINHDIIPQVINKTLAGVSHDKEDKAG*
Ga0182101_10254771	3300015284	Switchgrass Phyllosphere	YRWDPHAHGYTIVVIHPESKGIIIYIFSKDGSDKRTVLNINHDIVPQVIGKTLAGVSHDKEDKAG*
Ga0182101_10659751	3300015284	Switchgrass Phyllosphere	YNYRWDPQTHRYIIVLFHPESKGIVNYIFPKDGSGKGTVFNINHDIVPQVIGKTLAGVSHDKRDKAG*
Ga0182105_10646561	3300015290	Switchgrass Phyllosphere	DNRWYPQAHGYTVIAFHPKSKGIIIYIFPKDGSGKGTVLNINHDIVPQVIGKTLAGVSRKEYK*
Ga0182105_10671821	3300015290	Switchgrass Phyllosphere	MDPQAHRYIVVAFHPESKGIIIYLFPKDDSGKGTVLNINHDIVPQAIGKTLTGVSP
Ga0182105_10790731	3300015290	Switchgrass Phyllosphere	MDPQAHGYTVVAFHPESKGIVIYIVLKDGSGKGTVLNINHDIVPQGIGKALTGVSSGKR*
Ga0182103_10526881	3300015293	Switchgrass Phyllosphere	MGPQVHGYTIVAFHPESKGVVIYLFPKDDSGKGIVLNINHDIVPQVIGNALTGVSSSKE*
Ga0182104_10971101	3300015297	Switchgrass Phyllosphere	IRLQKDPQAHGYTVVAFHPENKGIVIYIFPKDGSDKGTILNINHDIDPQVIGKTLAGVSHDIKDKSG*
Ga0182180_10547452	3300015306	Switchgrass Phyllosphere	LYDYRWHSQAHGYTVVAFHPESKDIIIYIFPKDGSGKGIILNINYDIIPQVIGKTLAGVSRDKEDKSG*
Ga0182162_10483841	3300015310	Switchgrass Phyllosphere	VHGYTIVAFHPESKGIIIYIFPKDGGGKGIVLNINHNIVPQALSTALTGVSHDEE*
Ga0182162_10783011	3300015310	Switchgrass Phyllosphere	MDPQAHGYTVVAFHPESKGIIIYIFPKDGSGKSIVLNINHDIVPQVVGTTLAGVSRKEDK
Ga0182162_10924611	3300015310	Switchgrass Phyllosphere	MGQQAHGYTVVAFHPEIKGIVIYIFPKDGSGKGIVLNINHDIVPQVIGKTLVGVSREENK
Ga0182182_10254571	3300015311	Switchgrass Phyllosphere	VHGYTIVAFHPESKGIVIYIFPKDGGGKDIVLNINHDIVPQAIGRALTGVSHDKE*
Ga0182182_10706481	3300015311	Switchgrass Phyllosphere	VHRYTIVAFHPESKGIIIYIFPKDGSGKGTVLNINHDIVPQVIGKTLAGVSHDKEDKLG*
Ga0182182_11174701	3300015311	Switchgrass Phyllosphere	MDLQAHRYTVVAFHPESKGTVIYFVPKDGSGKGTVLNVNHDIVPQEIGKTLTGVSPGKE*
Ga0182168_10855042	3300015312	Switchgrass Phyllosphere	MGPQAHRYTIVAFHPESKDIVIYLFPKDGSGKGIVLNINHDIVPQAIGKTLTGVSPGKEISKGNAT*
Ga0182164_10560161	3300015313	Switchgrass Phyllosphere	KGIIIYLCPKGIILNINHDTVPQAIGNTLTGVSTDKE*
Ga0182164_10933181	3300015313	Switchgrass Phyllosphere	MDPQAHGYTVVAFHLESKGVVIYLVPKDGSGKGIVLNINHNIVPQAIGKTLTGVSPGKE*
Ga0182164_11048341	3300015313	Switchgrass Phyllosphere	MDPQAHGYTVAAFNSESKGIVIYFVPKDGSGKGIVLNINHDIVPQAIGKL*
Ga0182164_11186311	3300015313	Switchgrass Phyllosphere	LNLPLYNYRWDLQAHGYTVVAFHPESKGIIVYIFPKDGSGKGIVLNINHDIVHQAIGKTLTGVSPGKE*
Ga0182120_10737221	3300015315	Switchgrass Phyllosphere	MDPQAHGYTVVAFHPESKGIVIYVFPKDGCGKGIILNINHGIIPQVIGIALIGVSRNQEDKSG*
Ga0182120_11345551	3300015315	Switchgrass Phyllosphere	VAFHPESKGIIIYIFSKDGSGKGIVLNINYDIVPQAIGRTLTGVSRDKEI*
Ga0182121_10237283	3300015316	Switchgrass Phyllosphere	MDPQAHGYTIVAFHPESKGIVIYFVPKDGSGKGIVLNINHDIVPQAIGKTLIGVSPDK
Ga0182136_11245581	3300015317	Switchgrass Phyllosphere	VAFHSESKGIVIYFVPKDSSGKGIVLNINHDIVPEAISKTLTGVSPGKE*
Ga0182181_10237701	3300015318	Switchgrass Phyllosphere	MDPQAHGDTVVAFHPESKGIIIYIFPKDGSGKGTVLNINHDIVPQVIGKTLAGVSHDKEDKLG*
Ga0182181_10914312	3300015318	Switchgrass Phyllosphere	MDPQEHGYTAVAFHSESKGILFICFPKDGSGKGTILNINHDIVPQAIGKTLTGVSPGKEISKG
Ga0182181_10957111	3300015318	Switchgrass Phyllosphere	YTVVAFHPESKGIVIYIFPKDGSGKGIVLNINHDIVSQIIGKTLIEVSRDKEDKSE*
Ga0182165_10958891	3300015320	Switchgrass Phyllosphere	MDPQAHGDTVVAFHPESKGIVIYFVPKDGSGKGTVLNINHDIVPQAIGKTLTGVS
Ga0182134_10110731	3300015324	Switchgrass Phyllosphere	MPVACLNVYRKDPQAHGYTIVAFHPESKGIIIYLFPKDDSGKGTVLNINHDIVPQAIGKT
Ga0182148_10734061	3300015325	Switchgrass Phyllosphere	IRLQKDPQAHGYTIVAFHPESKGIIIYIFPKDGGGKGIVLNINHDIVPQAIGKTLTGVSHDKE*
Ga0182148_10969781	3300015325	Switchgrass Phyllosphere	DYRWDPQAHGYTVVAFHPESKGIVIYVFPKDDCGKGIILNINHGIVPQVIGKTLAGVSHDKEDKSG*
Ga0182114_10720201	3300015327	Switchgrass Phyllosphere	PHAHGYTIVAFHPESKGIVIYIFPKDDSGKDTVFNINHDIVPQVIGKTLAGVSHDKEDKLG*
Ga0182153_10379941	3300015328	Switchgrass Phyllosphere	VHGYTVVAFHLKSKGIVIYIFPKDGSGKGIVLDFNHDIVPQAIGRTLTGVSHAKA*
Ga0182153_10724441	3300015328	Switchgrass Phyllosphere	AHGYTIIAFHSESKGIVIYIFPKDGSGKGIVLNFNHDIVPQAIGKTLTGVSHDKE*
Ga0182135_10562341	3300015329	Switchgrass Phyllosphere	SKGIIIYIFPKDGSGKGIVLSNNHDNVSYVIDITLTVISHDRKINRVM*
Ga0182135_10853571	3300015329	Switchgrass Phyllosphere	MGSAFTRIYVVVFHPESKGIVIYIFQKDGSGNGIVLNINHDNVPHVIGKTLAGVSLDKEDKAG*
Ga0182152_10780882	3300015330	Switchgrass Phyllosphere	MDPQAHGYTVVAFHPESKGIAIYFVTKDGNGKGTVLNINHDIMPQAIGKTLTGVSPGKEISKD
Ga0182131_11388181	3300015331	Switchgrass Phyllosphere	VHGYTIVAFHPDSKGISFICVPKDDSGKGIVFNINHDIMPQAIGNTLIGVSTDKE*
Ga0182117_10854792	3300015332	Switchgrass Phyllosphere	MDPQAHGHTVVTFHPESKGIVIYLFPKDGSGKCIVLNIYHDIVPQAIGK
Ga0182117_11111941	3300015332	Switchgrass Phyllosphere	DYRWDRQAHGYIIVAFHLESKGIVIYIFPKDGSGKGTVLNINHDIVPQVIGKTLAGVSHDKEDKLG*
Ga0182147_11296861	3300015333	Switchgrass Phyllosphere	RLQMGPQAHGYTVVAFHPESKGIVIYLFPKDDSGKGIVLNINHNIVPQAIGKTLTGVSPSKGDKQG*
Ga0182132_10120671	3300015334	Switchgrass Phyllosphere	MDPQAHGYTVIAFHPESMGIVIYFVPKDGSGKGTVLNINHDIVPQVIGKTLTGVSLGKE*
Ga0182132_10264851	3300015334	Switchgrass Phyllosphere	MLTFSATAAHGYTVVAFHPESKGIVIYIFPKDGSGEGTVLNINHDNVPQVIGKTLAGVSHDKEDKSG*
Ga0182132_11049551	3300015334	Switchgrass Phyllosphere	VVFHPKSKGIVIYIFPKDGSGKGIVLNINHDIVPQAIGNTLTGISTDKE*
Ga0182132_11644381	3300015334	Switchgrass Phyllosphere	TIVAFHPKRKVIVIYIFPKDGCGKGSVLNINHDIVPQVIGKTLTGVSHDIKDKSG*
Ga0182116_10152871	3300015335	Switchgrass Phyllosphere	MDPQVHEYTVVAFHPESKGIVIYFVPKDGSGKGIVPNINHDIVPQAIGKTLTGLSPGKE*
Ga0182116_10549712	3300015335	Switchgrass Phyllosphere	MDPQAHGYTAVAFHPESKGIVIYFVPKDSSSKGIVLNINHDIVPQAIGKALTGVSHDKEISKGNVTQAHNHTQ
Ga0182116_11735541	3300015335	Switchgrass Phyllosphere	MDLQAHGYTVVAFHPESKGIVIYIFSKDASGKGIVLNINHDIVPEAIVRAPIG
Ga0182150_10763371	3300015336	Switchgrass Phyllosphere	MDPQAHGYTIVAFHSESKGIVIYFVPKDGSAKGIVLNINYDIVPQTIGKTLIGVSPGKE*
Ga0182150_11299481	3300015336	Switchgrass Phyllosphere	VHGYTIVAFYPESKGIVIYIFPKDGSGKGTVLNINHDIVPQAIGKTLAGVSHDIKDKSG*
Ga0182151_10657341	3300015337	Switchgrass Phyllosphere	DPQVHGYTIVAFHRESKSIVIYIFPKDDSAKGIVLNINYDILPQAIDRTLIGVSHDKR*
Ga0182151_11278921	3300015337	Switchgrass Phyllosphere	QKDSQAHGYTAVAFHAESKGIMIYIFPKDGRGKGTVLNINHDVVPQVIGKTLARVSRKEDK*
Ga0182151_11507401	3300015337	Switchgrass Phyllosphere	IVAFHPESKGIIIYIFPKDGSGKGIVLNFNHDIVPQAIGKTLTGVSHDKE*
Ga0182151_11617311	3300015337	Switchgrass Phyllosphere	MGPQAHGYTIVAFHPESKGIVIYFVPKDSSGKGIVPNINHDIVPQAIGKTLTGVNPGKE*
Ga0182149_10443532	3300015339	Switchgrass Phyllosphere	MQVHGYTVVAFHSESKGIIIFIFPKDGSGKGIVLNINHDIVPQVIGKTLAGVSHDIKDKIG*
Ga0182149_11727641	3300015339	Switchgrass Phyllosphere	VHGYTIIAFHTESKGIIICFVPKDGSGKGTVLNINHDNVPHVIGKTLAGVSLDKEDKAG*
Ga0182133_10449341	3300015340	Switchgrass Phyllosphere	HGYTVVAFHPESKGIVIYFVPKDGSGNGIVLNINHDIVPQAIGKTLTGVSPGKEISKGNAT*
Ga0182133_10755101	3300015340	Switchgrass Phyllosphere	MDPQAHGYTVVAFHPESKGIAIYFVTKDGSGKGTVLNINHDIVPQAIGKT
Ga0182133_11082431	3300015340	Switchgrass Phyllosphere	VHGYTVVAFHPESKGIVIYIFPKDGSGKGIVLDFNHDIVPQAIGRTLTGVSHAKA*
Ga0182133_11358951	3300015340	Switchgrass Phyllosphere	VHRYTVVAFHPESKGIIIYIFPKDSSGKGTILSINHDIVPQVICKTLAGLSHDKEDKSG*
Ga0182115_10357141	3300015348	Switchgrass Phyllosphere	VHEYTVVAFHPGSKGIDIYIFPKDGIDKDSALNNYHDIMPQAISRALIGVSRDRDKQG*
Ga0182115_10911181	3300015348	Switchgrass Phyllosphere	MDPQAHGYTVVAFHPESKGIAIYFVTKDGNGKGTVLNINHDIVLQAIGKT
Ga0182115_12387912	3300015348	Switchgrass Phyllosphere	VRGYTVVAFHPESKGIIIYFVPKDDSGKGIVLNINHDIVPQVIGKTLIAVSPG
Ga0182115_12471841	3300015348	Switchgrass Phyllosphere	VAFHPESRGIVIYIFPKDGSGKGTILNINHDNVPQVIDKTLAGVSHDIKDKLG*
Ga0182185_10550481	3300015349	Switchgrass Phyllosphere	PLSWYGLYNYRDPQVHGYTIVAFHPESKGIVIYISPKDGSGKGIVLNINHDIIPQVIAITLIG
Ga0182185_11362132	3300015349	Switchgrass Phyllosphere	MDPQAHRYTVVAFHPESKGIIIYFVPKDGSGKDIVLNINHDIVPQAIGKTLT
Ga0182185_11724001	3300015349	Switchgrass Phyllosphere	VHRYTVVTFHPKSKGIVIYIFPKDGSGKGIVLNINNDIVPQVLGKTLTGVSSGKE*
Ga0182185_12071111	3300015349	Switchgrass Phyllosphere	LYAFHPESKGIVIYIVLKDGSGKGTVLNINHDIVSQAIGKTLTGVSQDKEISKGNAT
Ga0182163_11404081	3300015350	Switchgrass Phyllosphere	MSILLILLSLGPGCHRYTIVPFHLESKGIIIYIFPKDGSGKGILLSINHDIVP*
Ga0182163_12087821	3300015350	Switchgrass Phyllosphere	VHGYTIIAFHSENKGIVIYIFPKDGSGKGTVLNINHDIVPQVIGKTLAGVSR
Ga0182163_12458091	3300015350	Switchgrass Phyllosphere	TVVAFHPESKGIAIYIFPNDGSGKDIVLNINHDIMPQAIGKL*
Ga0182163_12564861	3300015350	Switchgrass Phyllosphere	MVYCIRLQKDPQVHEYTVVAFHPESKCIDIYIFPKDGIDKDSALNNYHDIVPQAISRALTGVSRDRDKQG*
Ga0182169_11774841	3300015352	Switchgrass Phyllosphere	LQAHGYTIVAFHPESKGIVIYIFPKDGNGKGTVLNINHDIVPQVIGKTLVGVSHDKRDKAG*
Ga0182169_12463951	3300015352	Switchgrass Phyllosphere	EHGYTTVAFHSEVKGIVIYFVPKDSSGKGIVLNINHDIVPEAISKTLTGVSPGKG*
Ga0182169_12644901	3300015352	Switchgrass Phyllosphere	MDPQVHRYTIVAFHTESKGIVIYFVPKDGSDKGIVLNINHDIVNQAIGKTLTGVSPDKE*
Ga0182169_12672001	3300015352	Switchgrass Phyllosphere	QAHGYTVVAFHQESKGIVIYIFPKDGSGKGTVLNINHDIVPQVIGKTLVGVSHDVKDKTG
Ga0182179_11870422	3300015353	Switchgrass Phyllosphere	VAFHPESNGIVIYIFPKDGSGNGIVLNINHDIVPQAILIALTGVSHNK*
Ga0182179_13069141	3300015353	Switchgrass Phyllosphere	MDPQAHGYTIVAFHPESKGIVIYLFPKYGSGKGIVLNINHDIVPQAIGNTLTGVSIDKE*
Ga0182167_10848321	3300015354	Switchgrass Phyllosphere	KDPQAPRYTVVAFDPESKGIVIYIVPKDSGKGIVLHINHDIVPQAIGIALIGVRQDKDKQG*
Ga0182167_11300391	3300015354	Switchgrass Phyllosphere	TVVAFHPESKGIVIYIFPKDGSGKGIVLDFNHDIVPQAIGKTLTGVSHAKE*
Ga0182167_13132181	3300015354	Switchgrass Phyllosphere	KDPQAHGYTVVAFHPESKGIIIYFVPKDGSGKAIVLNINHDIVPQAIGKTLAGVSPDKE*
Ga0182197_10815181	3300017408	Switchgrass Phyllosphere	MDPQAHGYTVVAFHPESKGIVIYFVPKDGSGKGTILKINHDIVPQAIGKSLTGVSPGKKY
Ga0182199_11297321	3300017412	Switchgrass Phyllosphere	VHGYTIVAFHLESKGIIIYIFPKDGSGKGIVLNINHDIVPQAIGKTLTGVSHDKE
Ga0182199_11506791	3300017412	Switchgrass Phyllosphere	MDLQAHGDTFVAFHPESKGIVIYIFPKDGSGKGTVLNINHDIVPQVIGKTLAGVSRKEYK
Ga0182199_11530122	3300017412	Switchgrass Phyllosphere	AFHPESKGIVIYIFSKDGSGKCTVLNINHDIVPQVIGKTLAGVSRDKEDKSG
Ga0182195_10263831	3300017414	Switchgrass Phyllosphere	VHGYTIVAFHPESKGIIIYIFPKDGGGKGIVLNINHNIVPQAISTALTGVSHDEE
Ga0182195_11023582	3300017414	Switchgrass Phyllosphere	MDPQAHGDTVVAFHPESKGIVIYFVPKDGSGKGTVVNINHDIVPQAIGKT
Ga0182195_11627001	3300017414	Switchgrass Phyllosphere	MDPQAHRYTVVVFHPESKGIVIYFVPKDGSGKGTILKINHDIVPQAIGKSLIGVSPGKKYKQW
Ga0182195_12212842	3300017414	Switchgrass Phyllosphere	MGSTSDTVVAFHPKSKDIVIYIFPKDGSSKRTVLNINHDIDPQVIGKTLAGVN
Ga0182213_12437652	3300017421	Switchgrass Phyllosphere	FHPESKGIVIYIFPKDGSGKGTVLNINHDIVPQVIGKTLAGVSHDKEDKSG
Ga0182201_10699541	3300017422	Switchgrass Phyllosphere	VHGYTIVAFHPESKDIIIYIFPKDGSGKGIILNINYDIIPQVIGKTLAGVSRDKEDKSG
Ga0182201_11306961	3300017422	Switchgrass Phyllosphere	SSRQRHQNVIGYKLTITEKDPQAHGYTIVAFHPESKSIVIYIFSKDGSGKGIVLNINHDIVPQAIGRAPTGVSRDK
Ga0182196_10296822	3300017432	Switchgrass Phyllosphere	VYGYTVVAFHPESKGIVIYIFPKDGSGKGIVLDFNHDIVPQAIGKTLTGVSHAKE
Ga0182196_11034051	3300017432	Switchgrass Phyllosphere	MGQQAHGYTVVAFHPEIKGIVIYIFPKDGSGKGIVLNINHDIVPQVIGKTLAGVSHDKEDKSG
Ga0182198_11119271	3300017445	Switchgrass Phyllosphere	KQAHGYTVVAFHPESKDIVIYIFPKDGSGKCIVLDINHDIVPQVIGKTITGVSHDKEDK
Ga0182198_11961261	3300017445	Switchgrass Phyllosphere	MDPQAHGYTVAAFNSESKGIVIYFVPKDGSGKGIVLNINHDIVPKAIGNTLTGVSPSKE
Ga0182215_11202521	3300017447	Switchgrass Phyllosphere	MDPQAHGYTVVAFHPKSKGIIIYLFPKDGSVKGIILNVNHDIVPQAIGKTLTGVS
Ga0182212_11444811	3300017691	Switchgrass Phyllosphere	YSLYDYRWDPQAHGYTVVAFHPESKGIVIYIFPKDGSGKGTVLNINHDNVPHVIGKTLAGVSLDKEDKAG
Ga0182118_1086711	3300020223	Switchgrass Phyllosphere	MDPQAHGYNVVAFHPESKGIVIYLFPKDDSGKVIVLNINHDIGPQAIGKTLTAVSPSKE
Ga0207641_125669311	3300026088	Switchgrass Rhizosphere	YNYRCDPHAHGYTIVAFHPESKGIVIYIFPKDDSGKDTVLNINHDIIPQVIGKALARVSHYKEDKAG
Ga0268322_10312611	3300028049	Phyllosphere	VHGYTIVEFHLESKGIIIYIFPKDGSGKGIVLNINHDIVPQAIGKTLTGVSHDKE
Ga0268346_10414192	3300028053	Phyllosphere	TVVAFHPESKGIVIYIFPKDGSGKGIVLNINHDIVPQVIGRAMTGISHDKEISKANMT
Ga0268332_10104262	3300028058	Phyllosphere	MDPQVHGYTIVAFHPDSKGISFICVPKDDSGKGIVFNINHDIMPQAIGNTLIGVSTDKE
Ga0268332_10544692	3300028058	Phyllosphere	TVVAFNPESKGIVIYIFPKDGSGTGTVLNINHDIVPQVIGKTLAGVSHDKRDKGG
Ga0268342_10239562	3300028062	Phyllosphere	RLQKDPQMHGYTIVAFHRETKSIVIYIFPKDGSAKGIVLNINYDIVPQAIDRTLTGVSHDKR
Ga0268340_10456911	3300028064	Phyllosphere	MDPQEHGYTAVAFHSESKGIVIYFVPKDSSGKGIVLNINHDIVPEAISKTLTGVSPGKG
Ga0268340_10704981	3300028064	Phyllosphere	VHGYTVVAFHPESKGIIIYIFPKDGSGKGIVLDFNHDIVPQAIGKTLTGVSHAKE
Ga0268340_10869951	3300028064	Phyllosphere	MDPQAHGYTVVAFHPESKGIVIYFVAKDRSDKGIVLNINHDIVPQAIGKTLTGVSPGKE
Ga0268347_10185231	3300028142	Phyllosphere	MDLQAHRYTVVAFHPESKGTVIYFVPKDGSGKGTVLNINHDIVPQAIGKTLIGVSPGKE
Ga0268312_10135691	3300028248	Phyllosphere	MDPQAHGYTVIAFHPESMGIVIYFVPKDGSGKGTVLNINHDIVPQVIGKTLTGVSPGKE
Ga0268324_10268401	3300028251	Phyllosphere	VHGYTIVAFHPESKGIVIYISPKDGSGKGIVLNINHDIIPQVIAITLIG
Ga0268310_10119701	3300028262	Phyllosphere	VAFHPESKGIVIYIFPKDGSGKGTVLNINHDIVPQVIGKTLVGVSHDVKDKTG
Ga0268310_10507621	3300028262	Phyllosphere	MDPQAHGYTVVTFHPESKGIVIYFVPKDGSGKSTVLNINHNIVPQAIGKTLTGVSPGKEISKGNATQHTNT
Ga0268331_10106121	3300028474	Phyllosphere	VHGHTVVPFHPESKGIVIYIFPKDGSGKGTVHNINHDIISQVIGKTLAGVSHDKEDKSG
Ga0268327_10278251	3300028475	Phyllosphere	MDPQAHGYTVVAFHPKSKGIVIYFVPKDVSGKGTVLNINHDIVPQAIGKTLIGVSPGKE
Ga0268313_10035542	3300028523	Phyllosphere	DYRWDPQAQGYTVVAFHPKSKDIIIYIFPKDGSSKGTVFNINHDIVPQVIGKTLAGVSHNKEDKLG
Ga0214503_10302574	3300032466	Switchgrass Phyllosphere	VHGYTVVAFHPESKGIVIYLFPKDDSGKGIVLNINHDIVPQAIGKTLTG
Ga0214503_11794961	3300032466	Switchgrass Phyllosphere	MDPQAHGYTIVAFHPESKGIVLNINHDIVPQVIGNTLTGVSTYKE
Ga0214495_11523181	3300032490	Switchgrass Phyllosphere	MDPQAHGYTIVAFHPESKGIVIYLFPKYGSGKGIVLNINHDIIPQVIDKTLAGVSPGK
Ga0214490_11126251	3300032502	Switchgrass Phyllosphere	MGSACTRIYVVVFHPESKGIVIYIFPKDGSGKGIVLNINHDIVPQAIGIALTGVSRNKDDKSG
Ga0214500_10252441	3300032589	Switchgrass Phyllosphere	VHEYTVVAFHPESKCIDIYIFPKDGIDKDSALNNYHDIVPQAISRALTGVSRD
Ga0214484_11040341	3300032591	Switchgrass Phyllosphere	VHGYIVVAFHPESKGIVIYLFPKDDSGKGTVLNINHDIMPQAIGKTLTGVSPGKEISK
Ga0214499_10151321	3300032697	Switchgrass Phyllosphere	VHEYTVVAFHPESKCIDIYIFPKDGIDKDSALNNYHDIVPQAISRALIGVSRDRDKQG
Ga0314733_10094452	3300032761	Switchgrass Phyllosphere	MDPQVHGYTVVAFHPESKGIAIYFIPKDGNGKGTVLTINHDIVPQAIGKTLTGVSPGKE
Ga0314750_10022721	3300032914	Switchgrass Phyllosphere	VHEYTVVAFHPESKCIDIYIFPKDGIDKDSALNNYHDIVPQAISIALTGVSRDRDKQG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052318

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences