Metagenome Family F052258

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052258
Family Type	Metagenome
Number of Sequences	143
Average Sequence Length	45 residues
Representative Sequence	MKKTKEQIANEHKLVNSEREAEAAMILFACILGGVILILLAIAMG
Number of Associated Samples	87
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	10.49 %
% of genes near scaffold ends (potentially truncated)	20.28 %
% of genes from short scaffolds (< 2000 bps)	72.73 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.441 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (34.965 % of family members)
Environment Ontology (ENVO)	Unclassified (90.210 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (95.804 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.90% β-sheet: 0.00% Coil/Unstructured: 41.10%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF07486	Hydrolase_2	5.59
PF02739	5_3_exonuc_N	5.59
PF13730	HTH_36	1.40
PF03796	DnaB_C	0.70
PF00149	Metallophos	0.70
PF00959	Phage_lysozyme	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	5.59
COG3773	Cell wall hydrolase CwlJ, involved in spore germination	Cell cycle control, cell division, chromosome partitioning [D]	5.59
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	0.70
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.44 %
All Organisms	root	All Organisms	40.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.44 %
cellular organisms	root	All Organisms → cellular organisms	25.87 %
Viruses	superkingdom	All Organisms → Viruses	14.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.44 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	25.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.20 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	1.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.44 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.20 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	1.40 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.40 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.44 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6.29 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6.29 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.20 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.50 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	1.40 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.40 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.44 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	6.29 %
Acidiferrobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales	5.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.20 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.50 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1.40 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.40 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.70 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.44 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	6.29 %
Acidiferrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae	5.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.20 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	3.50 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	1.40 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.44 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	6.29 %
Acidiferrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter	5.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.20 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	3.50 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1.40 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.44 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	6.29 %
unclassified Acidiferrobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter	5.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.20 %
unclassified Geobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae	3.50 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1.40 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.44 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	6.29 %
Acidiferrobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	5.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.20 %
Geobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	3.50 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1.40 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000116\|DelMOSpr2010_c10097013	Not Available	1121	Open in IMG/M
3300000116\|DelMOSpr2010_c10112784	Not Available	998	Open in IMG/M
3300000116\|DelMOSpr2010_c10219302	Not Available	597	Open in IMG/M
3300000117\|DelMOWin2010_c10017627	All Organisms → cellular organisms → Bacteria	3809	Open in IMG/M
3300001450\|JGI24006J15134_10028215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	2493	Open in IMG/M
3300001450\|JGI24006J15134_10151188	Not Available	761	Open in IMG/M
3300001460\|JGI24003J15210_10024872	All Organisms → cellular organisms → Bacteria	2235	Open in IMG/M
3300001460\|JGI24003J15210_10066448	Not Available	1140	Open in IMG/M
3300001460\|JGI24003J15210_10084015	Not Available	954	Open in IMG/M
3300001853\|JGI24524J20080_1002652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2721	Open in IMG/M
3300001853\|JGI24524J20080_1002698	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	2699	Open in IMG/M
3300001935\|GOS2223_1021511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	1399	Open in IMG/M
3300002482\|JGI25127J35165_1007754	All Organisms → cellular organisms → Bacteria	2783	Open in IMG/M
3300002482\|JGI25127J35165_1020392	All Organisms → Viruses → Predicted Viral	1604	Open in IMG/M
3300002482\|JGI25127J35165_1027257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	1330	Open in IMG/M
3300002482\|JGI25127J35165_1078848	Not Available	679	Open in IMG/M
3300002488\|JGI25128J35275_1002121	All Organisms → cellular organisms → Bacteria	5787	Open in IMG/M
3300002488\|JGI25128J35275_1008642	All Organisms → Viruses → Predicted Viral	2705	Open in IMG/M
3300004448\|Ga0065861_1006949	Not Available	2013	Open in IMG/M
3300004448\|Ga0065861_1006950	Not Available	1449	Open in IMG/M
3300004448\|Ga0065861_1071866	Not Available	572	Open in IMG/M
3300004460\|Ga0066222_1169318	Not Available	571	Open in IMG/M
3300004461\|Ga0066223_1001599	Not Available	564	Open in IMG/M
3300004461\|Ga0066223_1004110	Not Available	568	Open in IMG/M
3300006026\|Ga0075478_10238972	Not Available	547	Open in IMG/M
3300006027\|Ga0075462_10045619	All Organisms → Viruses	1398	Open in IMG/M
3300006735\|Ga0098038_1011456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	3469	Open in IMG/M
3300006737\|Ga0098037_1249844	Not Available	569	Open in IMG/M
3300006802\|Ga0070749_10039885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2890	Open in IMG/M
3300006802\|Ga0070749_10483433	All Organisms → Viruses	676	Open in IMG/M
3300006810\|Ga0070754_10109834	Not Available	1353	Open in IMG/M
3300006810\|Ga0070754_10114641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	1318	Open in IMG/M
3300006810\|Ga0070754_10324957	Not Available	685	Open in IMG/M
3300006916\|Ga0070750_10169236	All Organisms → Viruses	981	Open in IMG/M
3300006916\|Ga0070750_10418971	Not Available	557	Open in IMG/M
3300006919\|Ga0070746_10099670	Not Available	1450	Open in IMG/M
3300006919\|Ga0070746_10209859	Not Available	924	Open in IMG/M
3300006920\|Ga0070748_1237153	Not Available	659	Open in IMG/M
3300007234\|Ga0075460_10081379	Not Available	1181	Open in IMG/M
3300007276\|Ga0070747_1037046	All Organisms → Viruses → Predicted Viral	1909	Open in IMG/M
3300007963\|Ga0110931_1229694	Not Available	552	Open in IMG/M
3300008219\|Ga0114905_1212842	Not Available	619	Open in IMG/M
3300009172\|Ga0114995_10037665	Not Available	2803	Open in IMG/M
3300009422\|Ga0114998_10126645	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	1242	Open in IMG/M
3300009604\|Ga0114901_1067812	All Organisms → Viruses	1185	Open in IMG/M
3300009605\|Ga0114906_1199289	Not Available	670	Open in IMG/M
3300009785\|Ga0115001_10589925	Not Available	679	Open in IMG/M
3300010430\|Ga0118733_106172327	Not Available	627	Open in IMG/M
3300010936\|Ga0137784_1389242	Not Available	633	Open in IMG/M
3300011128\|Ga0151669_101049	Not Available	28283	Open in IMG/M
3300011258\|Ga0151677_1023732	Not Available	1583	Open in IMG/M
3300011258\|Ga0151677_1132207	Not Available	536	Open in IMG/M
3300017697\|Ga0180120_10050623	Not Available	1874	Open in IMG/M
3300017697\|Ga0180120_10327635	Not Available	609	Open in IMG/M
3300017708\|Ga0181369_1021971	Not Available	1547	Open in IMG/M
3300017710\|Ga0181403_1059177	Not Available	799	Open in IMG/M
3300017713\|Ga0181391_1023304	Not Available	1531	Open in IMG/M
3300017713\|Ga0181391_1086489	All Organisms → Viruses	714	Open in IMG/M
3300017713\|Ga0181391_1087561	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300017719\|Ga0181390_1037843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	1473	Open in IMG/M
3300017720\|Ga0181383_1201496	All Organisms → Viruses	528	Open in IMG/M
3300017725\|Ga0181398_1048562	Not Available	1029	Open in IMG/M
3300017732\|Ga0181415_1016786	All Organisms → Viruses	1710	Open in IMG/M
3300017737\|Ga0187218_1055964	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300017737\|Ga0187218_1062376	Not Available	917	Open in IMG/M
3300017737\|Ga0187218_1064412	Not Available	901	Open in IMG/M
3300017738\|Ga0181428_1168692	Not Available	511	Open in IMG/M
3300017741\|Ga0181421_1037490	All Organisms → Viruses	1302	Open in IMG/M
3300017743\|Ga0181402_1184652	Not Available	520	Open in IMG/M
3300017748\|Ga0181393_1011213	Not Available	2722	Open in IMG/M
3300017748\|Ga0181393_1038121	All Organisms → Viruses	1345	Open in IMG/M
3300017748\|Ga0181393_1056154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	1066	Open in IMG/M
3300017749\|Ga0181392_1186935	Not Available	599	Open in IMG/M
3300017757\|Ga0181420_1108014	Not Available	852	Open in IMG/M
3300017758\|Ga0181409_1108549	Not Available	825	Open in IMG/M
3300017758\|Ga0181409_1148848	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300017759\|Ga0181414_1183917	Not Available	542	Open in IMG/M
3300017763\|Ga0181410_1140533	Not Available	682	Open in IMG/M
3300017764\|Ga0181385_1182914	Not Available	633	Open in IMG/M
3300017768\|Ga0187220_1095980	Not Available	895	Open in IMG/M
3300017768\|Ga0187220_1162990	Not Available	673	Open in IMG/M
3300017769\|Ga0187221_1155377	Not Available	676	Open in IMG/M
3300017770\|Ga0187217_1012092	All Organisms → Viruses	3153	Open in IMG/M
3300017771\|Ga0181425_1062140	Not Available	1210	Open in IMG/M
3300017773\|Ga0181386_1184806	Not Available	630	Open in IMG/M
3300017776\|Ga0181394_1221452	Not Available	572	Open in IMG/M
3300017783\|Ga0181379_1154749	Not Available	816	Open in IMG/M
3300017786\|Ga0181424_10128430	Not Available	1092	Open in IMG/M
3300017786\|Ga0181424_10131176	Not Available	1078	Open in IMG/M
3300017786\|Ga0181424_10283439	Not Available	689	Open in IMG/M
3300021335\|Ga0213867_1006027	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5196	Open in IMG/M
3300022067\|Ga0196895_1021217	Not Available	724	Open in IMG/M
3300022068\|Ga0212021_1071543	Not Available	711	Open in IMG/M
3300022074\|Ga0224906_1005835	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5142	Open in IMG/M
3300022074\|Ga0224906_1014651	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2943	Open in IMG/M
3300025048\|Ga0207905_1002717	All Organisms → Viruses	3606	Open in IMG/M
3300025048\|Ga0207905_1004109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2829	Open in IMG/M
3300025071\|Ga0207896_1004306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	2629	Open in IMG/M
3300025071\|Ga0207896_1025227	Not Available	1020	Open in IMG/M
3300025079\|Ga0207890_1031607	Not Available	965	Open in IMG/M
3300025120\|Ga0209535_1021880	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	3214	Open in IMG/M
3300025120\|Ga0209535_1097675	Not Available	1061	Open in IMG/M
3300025127\|Ga0209348_1000655	Not Available	17621	Open in IMG/M
3300025127\|Ga0209348_1002692	All Organisms → cellular organisms → Bacteria	8256	Open in IMG/M
3300025127\|Ga0209348_1007176	All Organisms → cellular organisms → Bacteria	4653	Open in IMG/M
3300025127\|Ga0209348_1012490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	3344	Open in IMG/M
3300025127\|Ga0209348_1029718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1970	Open in IMG/M
3300025127\|Ga0209348_1031165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → unclassified Acidiferrobacter → Acidiferrobacter sp.	1912	Open in IMG/M
3300025127\|Ga0209348_1032507	All Organisms → Viruses → Predicted Viral	1861	Open in IMG/M
3300025127\|Ga0209348_1070772	Not Available	1130	Open in IMG/M
3300025127\|Ga0209348_1084328	All Organisms → Viruses → Predicted Viral	1009	Open in IMG/M
3300025127\|Ga0209348_1123300	Not Available	784	Open in IMG/M
3300025127\|Ga0209348_1125747	Not Available	773	Open in IMG/M
3300025128\|Ga0208919_1163123	Not Available	685	Open in IMG/M
3300025132\|Ga0209232_1005221	All Organisms → cellular organisms → Bacteria	5791	Open in IMG/M
3300025132\|Ga0209232_1014592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	3160	Open in IMG/M
3300025132\|Ga0209232_1040981	All Organisms → Viruses	1731	Open in IMG/M
3300025132\|Ga0209232_1152299	Not Available	737	Open in IMG/M
3300025137\|Ga0209336_10113633	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	750	Open in IMG/M
3300025138\|Ga0209634_1251465	Not Available	639	Open in IMG/M
3300025168\|Ga0209337_1060076	Not Available	1924	Open in IMG/M
3300025610\|Ga0208149_1146967	Not Available	539	Open in IMG/M
3300025652\|Ga0208134_1024131	Not Available	2229	Open in IMG/M
3300025759\|Ga0208899_1026518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2790	Open in IMG/M
3300025853\|Ga0208645_1033084	All Organisms → Viruses	2657	Open in IMG/M
3300027687\|Ga0209710_1017434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3849	Open in IMG/M
3300027791\|Ga0209830_10005547	Not Available	8821	Open in IMG/M
3300028022\|Ga0256382_1098600	Not Available	701	Open in IMG/M
3300028125\|Ga0256368_1020037	Not Available	1178	Open in IMG/M
3300028125\|Ga0256368_1034114	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	907	Open in IMG/M
3300029309\|Ga0183683_1006716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3308	Open in IMG/M
3300029309\|Ga0183683_1050655	Not Available	592	Open in IMG/M
3300029448\|Ga0183755_1007188	Not Available	4846	Open in IMG/M
3300029448\|Ga0183755_1011780	All Organisms → Viruses → Predicted Viral	3362	Open in IMG/M
3300029448\|Ga0183755_1019059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2329	Open in IMG/M
3300029448\|Ga0183755_1033688	Not Available	1471	Open in IMG/M
3300029448\|Ga0183755_1056471	Not Available	954	Open in IMG/M
3300029448\|Ga0183755_1069981	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	790	Open in IMG/M
3300029787\|Ga0183757_1006007	All Organisms → cellular organisms → Bacteria	3949	Open in IMG/M
3300029787\|Ga0183757_1038644	Not Available	921	Open in IMG/M
3300031622\|Ga0302126_10003791	Not Available	8315	Open in IMG/M
3300031622\|Ga0302126_10058579	Not Available	1592	Open in IMG/M
3300033742\|Ga0314858_039986	Not Available	1112	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	37.76%
Strait	Environmental → Aquatic → Marine → Strait	25.87%
Coastal	Environmental → Aquatic → Marine → Coastal	25.17%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.99%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	2.80%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.70%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	37.06%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	25.87%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	24.48%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.99%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	2.80%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.70%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.70%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.70%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	34.97%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	25.87%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	13.99%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	6.99%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	4.20%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	2.80%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	2.10%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	2.10%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	2.10%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.40%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.70%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	0.70%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.70%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.70%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001853	Marine viral communities from the Subarctic Pacific Ocean - LP-49	Environmental	Open in IMG/M
3300001935	Marine microbial communities from Northern Gulf of Maine, Canada - GS007	Environmental	Open in IMG/M
3300002482	Marine viral communities from the Pacific Ocean - ETNP_2_30	Environmental	Open in IMG/M
3300002488	Marine viral communities from the Pacific Ocean - ETNP_2_60	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004460	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004461	Marine viral communities from Newfoundland, Canada BC-2	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300007234	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA	Environmental	Open in IMG/M
3300007276	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009422	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138	Environmental	Open in IMG/M
3300009604	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16	Environmental	Open in IMG/M
3300009605	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300010430	Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samples	Environmental	Open in IMG/M
3300010936	Marine microbial communities from surface seawater of North Pacific Subtropical Gyre ? Stn. ALOHA, 15m	Environmental	Open in IMG/M
3300011128	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_2, 0.02	Environmental	Open in IMG/M
3300011258	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, permeate	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017708	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG	Environmental	Open in IMG/M
3300017710	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28	Environmental	Open in IMG/M
3300017713	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11	Environmental	Open in IMG/M
3300017719	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21	Environmental	Open in IMG/M
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental	Open in IMG/M
3300017725	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29	Environmental	Open in IMG/M
3300017732	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 38 SPOT_SRF_2012-12-11	Environmental	Open in IMG/M
3300017737	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11 (version 2)	Environmental	Open in IMG/M
3300017738	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12	Environmental	Open in IMG/M
3300017741	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19	Environmental	Open in IMG/M
3300017743	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17	Environmental	Open in IMG/M
3300017748	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21	Environmental	Open in IMG/M
3300017749	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017758	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30	Environmental	Open in IMG/M
3300017759	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28	Environmental	Open in IMG/M
3300017763	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017768	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)	Environmental	Open in IMG/M
3300017769	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)	Environmental	Open in IMG/M
3300017770	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)	Environmental	Open in IMG/M
3300017771	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13	Environmental	Open in IMG/M
3300017773	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24	Environmental	Open in IMG/M
3300017776	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23	Environmental	Open in IMG/M
3300017783	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10	Environmental	Open in IMG/M
3300017786	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18	Environmental	Open in IMG/M
3300021335	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO540	Environmental	Open in IMG/M
3300022067	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v3)	Environmental	Open in IMG/M
3300022068	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300025048	Marine viral communities from the Subarctic Pacific Ocean - LP-49 (SPAdes)	Environmental	Open in IMG/M
3300025071	Marine viral communities from the Pacific Ocean - LP-36 (SPAdes)	Environmental	Open in IMG/M
3300025079	Marine viral communities from the Pacific Ocean - LP-48 (SPAdes)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025137	Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)	Environmental	Open in IMG/M
3300025138	Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025610	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025652	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)	Environmental	Open in IMG/M
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental	Open in IMG/M
3300025853	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)	Environmental	Open in IMG/M
3300027687	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)	Environmental	Open in IMG/M
3300027791	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)	Environmental	Open in IMG/M
3300028022	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750m	Environmental	Open in IMG/M
3300028125	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SB	Environmental	Open in IMG/M
3300029309	Marine viral communities collected during Tara Oceans survey from station TARA_100 - TARA_R100001440	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300029787	Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172	Environmental	Open in IMG/M
3300031622	Marine microbial communities from Western Arctic Ocean, Canada - CB4_20m	Environmental	Open in IMG/M
3300033742	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawater	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSpr2010_100970133	3300000116	Marine	MKKTKRIESEHKLVNSEREAEAAMILFACILGGLILILLAIAMG*
DelMOSpr2010_101127843	3300000116	Marine	MKKTKQIESERKLVNSEREAEAAMILFACILGGVILILLAIAMG*
DelMOSpr2010_102193023	3300000116	Marine	MKKTKQIESEHKLVNSEREAEAAMILFACILGGVILILLAIAMG*
DelMOWin2010_100176274	3300000117	Marine	MKKTKEQIVNEHKLVNSEREAEAAMILFACILGGVILILLAIAMG*
JGI24006J15134_100282153	3300001450	Marine	MKKTKEQIANEHKLVNSEREEEAAMVLFACILGGVILIVLAIAMG*
JGI24006J15134_101511881	3300001450	Marine	LGIIQQINRKIMKKTKQTISERKLVNSEREAESAMILFACILGGVILILLAIAMG*
JGI24003J15210_100248724	3300001460	Marine	MKKTNKIVNEHKLVNSEREAEAAMILFACILGGVILIVLAIAMG*
JGI24003J15210_100664484	3300001460	Marine	MPCTSFSSNHKQTMKKTKQTISERKLVNSEREAEAAMILFACILGGVILIVLAIAMG*
JGI24003J15210_100840153	3300001460	Marine	IKTINNMKKTKQIESERKLVNSEREAEAAMILFACILGGVILILLAIAMG*
JGI24524J20080_10026527	3300001853	Marine	MKKTKQTISERKLVNSEREAEAAMILFACILGGVILILLAIAMG*
JGI24524J20080_10026986	3300001853	Marine	MPCTSFSSNHKQTMKKTKQTISERKLVNSEREAEAAMILFACILGGVILILLAIAMG*
GOS2223_10215111	3300001935	Marine	MKKTKHIATEHKLVNSEKELEAAATLFACILGGAI
JGI25127J35165_10077546	3300002482	Marine	MKNKKHIATGHKLVNSEKEFEAAAILFACILGGVILILLAIAMG*
JGI25127J35165_10203923	3300002482	Marine	MKNKKHIATEHKLVNSEKEFEAAATLFACILGGAIIILIALAMG*
JGI25127J35165_10272573	3300002482	Marine	MKKTKRIATEHRLVNSEKEFEAAAILFACMVGGSIIILLALLMG*
JGI25127J35165_10788482	3300002482	Marine	MKKTKHTATEHKLVNSEKEFEAAATLFACILGAGIIVLLALAMG*
JGI25128J35275_100212111	3300002488	Marine	MPCTNFSSNHKQTMKKTKQTISEHKLVNSEREAEAAMILFACILGGVILILLAIAMG*
JGI25128J35275_10086424	3300002488	Marine	MKKTKEQIATEHKIVNSEKEFEAAATLFACILGGAIIILIALATN*
Ga0065861_10069494	3300004448	Marine	MKKTKQTISERKLVNSEREAEAAMILFACILGGVILIVLAIAMG*
Ga0065861_10069501	3300004448	Marine	TSFSSNHKQTMKKTKQTISEHKLVNSERETEAAMILFACILGGVILILLAIAMG*
Ga0065861_10718661	3300004448	Marine	MKKTKEQIVNEHKLVNSEREAEAAMILFACILGGVVLILLAIAMG*
Ga0066222_11693181	3300004460	Marine	MKKTKEQIVNEHKLVNSEREAEAAMILFACILGGVILILLAIGIN*
Ga0066223_10015991	3300004461	Marine	MPCTSFSSNHKQTMKKTKQTISEHKLVNSERETEAAMILFACILGGVILILLAIAMG*
Ga0066223_10041101	3300004461	Marine	MKKTKQTISERKLVNSEREAEAAMILFACILGGVILIVLAIAMG
Ga0075478_102389723	3300006026	Aqueous	MKNKKHIATEHKLVNSEKEFEAAATLFACMVGAGIIVLLALEMG*
Ga0075462_100456192	3300006027	Aqueous	MKKTKQHIATGHKLVNSEREFEAAATLFACILGGAIIILIALAMG*
Ga0098038_10114563	3300006735	Marine	MKKTKHIATEHKLVKSEKEFEAAAILFACMVGAGIMVLLALAMR*
Ga0098037_12498442	3300006737	Marine	MKKTKEQIETEHKLVNSEREEEAAMILFACILGGVILILLAIAMG*
Ga0070749_100398853	3300006802	Aqueous	MKNKKHIATEHKLVNSEKEFEAAATLFACMVGAGIIVLLALAMG*
Ga0070749_104834331	3300006802	Aqueous	MKKTKQQIATGHKLVNSEREFEAAATLFACILGGAIIILIALAMG*
Ga0070754_101098346	3300006810	Aqueous	MKKTKQIESERKLVNSEREEEAAMVLFACILGGVILILLAIAMG*
Ga0070754_101146416	3300006810	Aqueous	VFIIMKKTKEQIVNEHKLVNSEREAEAAMILFACILGGVILILLAIAMG*
Ga0070754_103249573	3300006810	Aqueous	MKNKKQITTGHKLVNSEKELESAAILFACILGAGLIVLLALAMG*
Ga0070750_101692363	3300006916	Aqueous	MKKTKHIATEHKLVNSEKEFEAAATLFACILGGAIIILIALAMG*
Ga0070750_104189712	3300006916	Aqueous	MKKTKEQIANEHKLVNSEREAEAAMILFACILGGVILILLAIAMG*
Ga0070746_100996701	3300006919	Aqueous	KNRKYNKMKKTKQHIATGHKLVNSEREFEAAATLFACILGGAIIILIALAMG*
Ga0070746_102098591	3300006919	Aqueous	MKKTKHIATEHKLVNSEKEFEAAATLFACMVGGAIIILIALAMG*
Ga0070748_12371531	3300006920	Aqueous	MKNKKHIATEHKLVNSEKEFEAAMILFACILGAGLIVLLALAMG*
Ga0075460_100813791	3300007234	Aqueous	KEQIVNEHKLVNSEREAEAAMILFACILGGVILILLAIAMG*
Ga0070747_10370462	3300007276	Aqueous	MENKKHIATEHKLVNSEKEFEAAATLFACILGGAIIILIALAMG*
Ga0110931_12296941	3300007963	Marine	TINNMKNTKHIATGHKLVNSEREFEAAATLFACILGGAIIILIALAMG*
Ga0114905_12128422	3300008219	Deep Ocean	MKNTKRIATGHKLVNSEKEFEAAAILFACILGAGVIVLLALAMG*
Ga0114995_100376655	3300009172	Marine	MKKTKQTISERKLVNSEREAESAMILFACILGGVILILLAIAMG*
Ga0114998_101266451	3300009422	Marine	MKKTKQTISERKLVNSERETEAAMILFACILGGVILILLAIAMG*
Ga0114901_10678122	3300009604	Deep Ocean	MKKTKRIATEHKLVNSEKEFEAAVILFACMVGAGLIVLLALAMGN*
Ga0114906_11992891	3300009605	Deep Ocean	MKKTNKIVSEHKLVNSEREAEAAMILFACILGGLMLILIAIATN*
Ga0115001_105899253	3300009785	Marine	MKKTKEQIVNEHKLVNSEREAEAAMILFACILGGVVLILLAIAIG*
Ga0118733_1061723271	3300010430	Marine Sediment	KQNMKKTKQIESERKLVNSEREAEAAMILFACILGGVILILLAIAMG*
Ga0137784_13892421	3300010936	Marine	KHIVNEHKLVNSEKELEAAVILFACMVGAGVIILLALAMG*
Ga0151669_10104923	3300011128	Marine	MKKTKQTISERKLVNSEREAEAAMILFACILGGVILILLAIAIG*
Ga0151677_10237324	3300011258	Marine	NHQTNKQAMKKTKQTISERKLVNSEREAEAAMILFACILGGVILILLAIAIG*
Ga0151677_11322073	3300011258	Marine	LNHQTNKQAMKKTKQTISERKLVNSEREAEAEMRLFACILGGVILILLAIAIG*
Ga0180120_100506231	3300017697	Freshwater To Marine Saline Gradient	KKTKHIVNEHKLVHSEKEFESAATLFACILGGAIIILIALAMG
Ga0180120_103276351	3300017697	Freshwater To Marine Saline Gradient	MKNKKHIATEHKLVNSEKELEAAATLFACILGGAIIILIALAMG
Ga0181369_10219711	3300017708	Marine	QTMKKTKQTISEHKLVNSERETEAAMILFACILGGAMIILLSIAIG
Ga0181403_10591772	3300017710	Seawater	MKKTKQQIATERKLVNSEKEFEAAAILFACMVGAGIIVLLALAIGN
Ga0181391_10233043	3300017713	Seawater	MKKTNKIANEHKLVNSEREAEAAMILFACILGGVILILLAIAMG
Ga0181391_10864891	3300017713	Seawater	MKKTKEQIVNEHKLVNSEREAEAAMILFACILGGVILIVLAIAMG
Ga0181391_10875613	3300017713	Seawater	MKKTKQTISEHKLVNSEREAEAAMILFACILGGVILILLAIAIG
Ga0181390_10378431	3300017719	Seawater	MKKTNKIANEHKLVNSEREAEAAMILFACILGGVILIVLAIAMG
Ga0181383_12014961	3300017720	Seawater	MKKTKRIATEHKLVNSEKELEAAVTLFACMIGAGVIILLALAMG
Ga0181398_10485622	3300017725	Seawater	MKKTKEQIVNEHKLVNSEREAEAAMILFACILGGVILILLAIAIG
Ga0181415_10167864	3300017732	Seawater	MKKTKQQITTERKLVNSEKEFEAAAILFACILGAGIIVLLALAMG
Ga0187218_10559643	3300017737	Seawater	MKKTKQTISEHKLVNSEREAEAAMILFACILGGVILILLAIAMG
Ga0187218_10623763	3300017737	Seawater	MKKTNKIANEHKLVNSEREAEAAMILFACILGGVILILLVIAMG
Ga0187218_10644121	3300017737	Seawater	TNKIANEHKLVNSEREAEAAMILFACILGGVILILLAIAMG
Ga0181428_11686922	3300017738	Seawater	MKKTKRIATEHKLVNSEKELEAAVTLFACMVGAGVIILLALAMG
Ga0181421_10374904	3300017741	Seawater	MKKTKQQIATERKLVNSEKELEAAATLFACILGGA
Ga0181402_11846522	3300017743	Seawater	MKKTKQIVTEHKLVNSEREAEAAMILFACILGGVILILLAIAMG
Ga0181393_10112136	3300017748	Seawater	MKKTKQIVTEHKLVNSEREAEAAMILFACILGGVILILLAIAIG
Ga0181393_10381213	3300017748	Seawater	MKKTKEQIVNEHKLVNSEREAEAAMILFACILGGIILILLAIAIG
Ga0181393_10561541	3300017748	Seawater	MKKTKQIESERKLVNSEREAEAAMILFACILGGVILILLAIAIG
Ga0181392_11869351	3300017749	Seawater	MNKKTKEQIANEHKLVNSEREEEAAMILFACILGGVILILLAIAMG
Ga0181420_11080142	3300017757	Seawater	MKKTKQTISEHKLVNSERETEAAMILFACILGGVILILLAIAMG
Ga0181409_11085491	3300017758	Seawater	MKKTKQQIATERKLVNSEKEFEAAAILFACILGGAIIILIALATN
Ga0181409_11488483	3300017758	Seawater	MKKTKQTISEHKLVNSEREAEAAMILFACILGGVILILLALAMG
Ga0181414_11839171	3300017759	Seawater	RTKQQIATEHKLVNSEKEFESAAILFACILGGAIIILIALAIGN
Ga0181410_11405331	3300017763	Seawater	MKKTKQIESERKLVNSEREEEAAMILFACILGGVILILLAIAMG
Ga0181385_11829144	3300017764	Seawater	MKKTKQQIATGHKLVNSEKELEAAVILFACILGAGIIVLLALAMG
Ga0187220_10959801	3300017768	Seawater	MKKTKQQIATGHKLVNSEKELEAAVILFACILGAGIIVLLALATN
Ga0187220_11629903	3300017768	Seawater	MNKTKQQITTEHKLVNSEREAEAAMILFACILGGAIIILIALATN
Ga0187221_11553772	3300017769	Seawater	MKKTNKIVNEHKLVNSEREAEAAMILFACILGGVILILLAIAMG
Ga0187217_10120927	3300017770	Seawater	MKKTKEQIVNEHKLVNSEREAEAAMILFACILGGIILILLAIAMG
Ga0181425_10621401	3300017771	Seawater	MKKTKRIATQHKLVNSEKELEAAVILFACILGAGIIVLLALATN
Ga0181386_11848061	3300017773	Seawater	MKKTKQIESEHKLVNSEREAEAAMILFACILGGVILILLAIAMG
Ga0181394_12214522	3300017776	Seawater	MKKTKQTISEHKLVNSGRETEAAMILFACILGGAMIIL
Ga0181379_11547491	3300017783	Seawater	IVNEHKLVNSEREAEAAMILFACILGGVILILLAIAMG
Ga0181424_101284303	3300017786	Seawater	MKKTKEQIVNEHKLVNSEREAEAAMILFACHLGGVILILLAIAMG
Ga0181424_101311762	3300017786	Seawater	MKKTKEQIANEHKLVNSEREAEAAMILFACILGGVILILLAIAMG
Ga0181424_102834391	3300017786	Seawater	MKKTNKIVNEHKLVNSEREAEAAMILFACILGGVILILLAIAM
Ga0213867_100602711	3300021335	Seawater	MKKTKQIETEHKLVNSEREAEAAMVLFACILGGVILILLAIAMG
Ga0196895_10212172	3300022067	Aqueous	MKKTKEQIVNEHKLVNSEREAEAAMILFACILGGVILILLAIAMG
Ga0212021_10715432	3300022068	Aqueous	MKKTKQHIATGHKLVNSEREFEAAATLFACILGGAIIILIALAMG
Ga0224906_10058359	3300022074	Seawater	MKKTKQQVATEHKLVNSEKELEAAAILFACILGAGLIVLLALATN
Ga0224906_10146517	3300022074	Seawater	MKKTKQQIATERKLVNSEKEFEAAATLFACMVGGGLIILLALAMG
Ga0207905_10027177	3300025048	Marine	MKKTKEQIANEHKLVNSEREEEAAMVLFACILGGVILIVLAIAIG
Ga0207905_10041093	3300025048	Marine	MKKTKQIESERKLVNSEREAEAAMILFACILGGVILILLAIAMG
Ga0207896_10043068	3300025071	Marine	MKKTKEQIANEHKLVNSEREEEAAMVLFACILGGVILIVLAIAMG
Ga0207896_10252274	3300025071	Marine	MKKTKQTISERKLVNSEREAESAMILFACILGGVILILLAIAMG
Ga0207890_10316074	3300025079	Marine	MKKTKQIESERKLVNSEREAEAAMILFACILGGVI
Ga0209535_10218807	3300025120	Marine	MPCTSFSSNHKQTMKKTKQTISERKLVNSEREAEAAMILFACILGGVILIVLAIAMG
Ga0209535_10976753	3300025120	Marine	MKKTNKIVNEHKLVNSEREAEAAMILFACILGGVILIVLAIAMG
Ga0209348_10006558	3300025127	Marine	MKKTKHIATEHKLVNSEKELEAAVILFACMVGAGLIILLALAMG
Ga0209348_100269213	3300025127	Marine	MKNTKHIVNEHKLVNSQRELVLSVIVFACMVGAGIIVLLALAMG
Ga0209348_10071765	3300025127	Marine	MKNKKHIATGHKLVNSEKEFEAAAILFACILGGVILILLAIAMG
Ga0209348_10124909	3300025127	Marine	MKNTKHIVNEHKLVNSQRELVLSVIVFACMVGAGLIILLALAMG
Ga0209348_10297186	3300025127	Marine	MKNTKHIATERKLVNSEKQFEAAAILFACMVGGSIIILLALAMG
Ga0209348_10311653	3300025127	Marine	MKKTKRIATEHRLVNSEKEFEAAAILFACMVGGSIIILLALLMG
Ga0209348_10325073	3300025127	Marine	MRINALAYSNMKNKKHIATEHKLVNSEKEFEAAATLFACILGGAIIILIALAMG
Ga0209348_10707722	3300025127	Marine	MKKTKHTATEHKLVNSEKEFEAAATLFACILGAGIIVLLALAMG
Ga0209348_10843283	3300025127	Marine	KTKEQIATEHKIVNSEKEFEAAATLFACILGGAIIILIALATN
Ga0209348_11233004	3300025127	Marine	MKNKKHIAAEHKLVNSEKEFEAAATLFACILGGVILILLAIAMG
Ga0209348_11257471	3300025127	Marine	MKKTKEQIATEHKIVNSEKEFEAAATLFACILGGAIIILIALAMG
Ga0208919_11631231	3300025128	Marine	MKNTKRIATGHKLVNSEREFEAAATLFACILGGAIIILIALAMG
Ga0209232_10052213	3300025132	Marine	MPCTNFSSNHKQTMKKTKQTISEHKLVNSEREAEAAMILFACILGGVILILLAIAMG
Ga0209232_10145927	3300025132	Marine	MKNTKHIATERKLVNSEKQFEAAAILFACMVGGSIIILLALLMG
Ga0209232_10409811	3300025132	Marine	MKKTKHIATEHKLVNSEKEFEAAVILFACMVGAGVIILLALAMG
Ga0209232_11522991	3300025132	Marine	MKKTKEQIATEHKIVNSEKEFEAAATLFACILGGAIIILIALA
Ga0209336_101136331	3300025137	Marine	MKKTKQTISERKLVNSERETEAAMILFACILGGIILILLAIAMG
Ga0209634_12514653	3300025138	Marine	MEKTKQTISERKLVNSERETEAAMILFACILGGIILILLAIAMG
Ga0209337_10600764	3300025168	Marine	QSFALAMPCTSFSSNHKQTMKKTKQTISERKLVNSEREAEAAMILFACILGGVILIVLAIAMG
Ga0208149_11469672	3300025610	Aqueous	MKNKKHIATEHKLVNSEKEFEAAATLFACMVGAGIIVLLALEMG
Ga0208134_10241314	3300025652	Aqueous	MKNKKHIATEHKLVNSEKEFEAAATLFACILGGAIIILIALAMG
Ga0208899_10265182	3300025759	Aqueous	MKNKKHIATEHKLVNSEKEFEAAATLFACMVGAGIIVLLALAMG
Ga0208645_10330849	3300025853	Aqueous	MKKTKQIESERKLVNSEREEEAAMVLFACILGGVILILLAIAMG
Ga0209710_101743410	3300027687	Marine	MKKTKQTISERKLVNSERETEAAMILFACILGGVILILLAIAMG
Ga0209830_100055478	3300027791	Marine	LGIIQQINRKIMKKTKQTISERKLVNSEREAESAMILFACILGGVILILLAIAMG
Ga0256382_10986002	3300028022	Seawater	MKKTKRIATEHKLVNSEKEFEAAVILFACMVGGAIIILLALAMG
Ga0256368_10200371	3300028125	Sea-Ice Brine	HEQTMKKTKQTISERKLVNSERETEAAMILFACILGGVILILLAIAMG
Ga0256368_10341141	3300028125	Sea-Ice Brine	MKKTKQTISERKLVNSERETEAAMILFACILGGVILIL
Ga0183683_10067166	3300029309	Marine	MKKTKQQIANEHKLVNSEKELGSAAILFACMVGAGIIVLLALAMG
Ga0183683_10506552	3300029309	Marine	MKKTKQQIATGRKLVNSEKELEAAVILFACILGAGLIVLLALATN
Ga0183755_10071887	3300029448	Marine	MKNKKHIATEHKLVNSQRELDAAAILFACMVGGAIIILLALAMG
Ga0183755_10117804	3300029448	Marine	MKNTKRIATGHKLVNSEKEFEAAAILFACILGAGVIVLLALAMG
Ga0183755_10190597	3300029448	Marine	MKNKKHIATERKLVNSEKELEAAAILFACMVGAGLLVLLALATN
Ga0183755_10336882	3300029448	Marine	MKNTKRIATEHKLVNSEKELEAAATLFACILGGAIIILIALAMG
Ga0183755_10564714	3300029448	Marine	MKNKKHIATEHKLVNSEKEAEAAMILFACILGGAIIILIALAMG
Ga0183755_10699811	3300029448	Marine	MKKTKQQIATEHKLVNSEKEFEAAAILFACILGAGLIVLLALAM
Ga0183757_10060077	3300029787	Marine	MKNTKHIATERKLVNSEKEFEAAVILFACMVGAGLLVLLALATN
Ga0183757_10386442	3300029787	Marine	MKNKKHIATEHKLVNSDKEFESAAILFACMIGAGLIVLLALAMG
Ga0302126_100037919	3300031622	Marine	MKKTKQTISERKLVNSEREAEAAMILFACILGGVILILLAIAIG
Ga0302126_100585793	3300031622	Marine	MKKTKEQIVNEHKLVNSERETEAAMILFACILGGVILILLAIAMG
Ga0314858_039986_115_249	3300033742	Sea-Ice Brine	MKKTNKIVNEHKLVNSEREQEAAMILFACILGGVILILLAIAMG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F052258

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences