NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F052232

Metagenome / Metatranscriptome Family F052232

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F052232
Family Type Metagenome / Metatranscriptome
Number of Sequences 143
Average Sequence Length 40 residues
Representative Sequence LERVKAIQRNASAAAEADSYRPELIADDEPRYLRRQKPVEIR
Number of Associated Samples 127
Number of Associated Scaffolds 143

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 99.30 %
% of genes near scaffold ends (potentially truncated) 99.30 %
% of genes from short scaffolds (< 2000 bps) 89.51 %
Associated GOLD sequencing projects 125
AlphaFold2 3D model prediction Yes
3D model pTM-score0.20

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(21.678 % of family members)
Environment Ontology (ENVO) Unclassified
(27.972 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(60.839 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 22.86%    β-sheet: 0.00%    Coil/Unstructured: 77.14%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.20
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 143 Family Scaffolds
PF02873MurB_C 87.41
PF02875Mur_ligase_C 4.20
PF08245Mur_ligase_M 3.50
PF01098FTSW_RODA_SPOVE 1.40
PF13727CoA_binding_3 0.70
PF04101Glyco_tran_28_C 0.70
PF07228SpoIIE 0.70
PF13263PHP_C 0.70

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 143 Family Scaffolds
COG0812UDP-N-acetylenolpyruvoylglucosamine reductaseCell wall/membrane/envelope biogenesis [M] 87.41
COG0772Peptodoglycan polymerase FtsW/RodA/SpoVECell cycle control, cell division, chromosome partitioning [D] 1.40


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000550|F24TB_10851002All Organisms → cellular organisms → Bacteria → Acidobacteria807Open in IMG/M
3300000731|JGI12381J11899_1016513All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium591Open in IMG/M
3300001431|F14TB_100827952All Organisms → cellular organisms → Bacteria → Acidobacteria780Open in IMG/M
3300001593|JGI12635J15846_10086913All Organisms → cellular organisms → Bacteria → Acidobacteria2274Open in IMG/M
3300001593|JGI12635J15846_10252253All Organisms → cellular organisms → Bacteria → Acidobacteria1131Open in IMG/M
3300001661|JGI12053J15887_10311289All Organisms → cellular organisms → Bacteria → Acidobacteria768Open in IMG/M
3300002568|C688J35102_120223241All Organisms → cellular organisms → Bacteria → Acidobacteria935Open in IMG/M
3300002914|JGI25617J43924_10045745All Organisms → cellular organisms → Bacteria1586Open in IMG/M
3300004152|Ga0062386_101078909All Organisms → cellular organisms → Bacteria → Acidobacteria666Open in IMG/M
3300004152|Ga0062386_101487761All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium564Open in IMG/M
3300005159|Ga0066808_1029378All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium568Open in IMG/M
3300005171|Ga0066677_10528206All Organisms → cellular organisms → Bacteria → Acidobacteria677Open in IMG/M
3300005177|Ga0066690_10468275All Organisms → cellular organisms → Bacteria → Acidobacteria851Open in IMG/M
3300005450|Ga0066682_10045364All Organisms → cellular organisms → Bacteria2651Open in IMG/M
3300005526|Ga0073909_10541343All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium568Open in IMG/M
3300005555|Ga0066692_10336574All Organisms → cellular organisms → Bacteria → Acidobacteria957Open in IMG/M
3300005598|Ga0066706_10169757All Organisms → cellular organisms → Bacteria1657Open in IMG/M
3300005607|Ga0070740_10400668All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium532Open in IMG/M
3300005764|Ga0066903_105856022All Organisms → cellular organisms → Bacteria → Acidobacteria645Open in IMG/M
3300005842|Ga0068858_102332496All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium529Open in IMG/M
3300006086|Ga0075019_10196038All Organisms → cellular organisms → Bacteria1194Open in IMG/M
3300006163|Ga0070715_10144895All Organisms → cellular organisms → Bacteria1158Open in IMG/M
3300006163|Ga0070715_10266883All Organisms → cellular organisms → Bacteria → Acidobacteria901Open in IMG/M
3300006173|Ga0070716_101424679All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium564Open in IMG/M
3300006893|Ga0073928_11193031All Organisms → cellular organisms → Bacteria → Acidobacteria513Open in IMG/M
3300006903|Ga0075426_10033725All Organisms → cellular organisms → Bacteria3658Open in IMG/M
3300007258|Ga0099793_10693419All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium514Open in IMG/M
3300009012|Ga0066710_101764133All Organisms → cellular organisms → Bacteria → Acidobacteria937Open in IMG/M
3300009137|Ga0066709_100057203All Organisms → cellular organisms → Bacteria → Acidobacteria4462Open in IMG/M
3300009792|Ga0126374_10890615All Organisms → cellular organisms → Bacteria → Acidobacteria689Open in IMG/M
3300010043|Ga0126380_11857037All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium547Open in IMG/M
3300010322|Ga0134084_10024816All Organisms → cellular organisms → Bacteria1641Open in IMG/M
3300010360|Ga0126372_10592223All Organisms → cellular organisms → Bacteria → Acidobacteria1062Open in IMG/M
3300010361|Ga0126378_10185969All Organisms → cellular organisms → Bacteria2146Open in IMG/M
3300010398|Ga0126383_13254513All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium530Open in IMG/M
3300010866|Ga0126344_1020622All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium540Open in IMG/M
3300011120|Ga0150983_10198208All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium570Open in IMG/M
3300011120|Ga0150983_14677234All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium503Open in IMG/M
3300011271|Ga0137393_10604614All Organisms → cellular organisms → Bacteria → Acidobacteria940Open in IMG/M
3300012096|Ga0137389_10713517All Organisms → cellular organisms → Bacteria → Acidobacteria862Open in IMG/M
3300012189|Ga0137388_11926739All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium521Open in IMG/M
3300012357|Ga0137384_10977910All Organisms → cellular organisms → Bacteria → Acidobacteria681Open in IMG/M
3300012361|Ga0137360_10304743All Organisms → cellular organisms → Bacteria1323Open in IMG/M
3300012361|Ga0137360_11380325All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium607Open in IMG/M
3300012582|Ga0137358_10992447All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium544Open in IMG/M
3300012683|Ga0137398_11178433All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium524Open in IMG/M
3300012685|Ga0137397_11346694All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium505Open in IMG/M
3300012924|Ga0137413_10142491All Organisms → cellular organisms → Bacteria1555Open in IMG/M
3300012927|Ga0137416_10993316All Organisms → cellular organisms → Bacteria → Acidobacteria749Open in IMG/M
3300012930|Ga0137407_11389508All Organisms → cellular organisms → Bacteria → Acidobacteria667Open in IMG/M
3300012957|Ga0164303_10273757All Organisms → cellular organisms → Bacteria → Acidobacteria980Open in IMG/M
3300012960|Ga0164301_10579166All Organisms → cellular organisms → Bacteria → Acidobacteria825Open in IMG/M
3300014150|Ga0134081_10245480All Organisms → cellular organisms → Bacteria → Acidobacteria624Open in IMG/M
3300014157|Ga0134078_10448398All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium589Open in IMG/M
3300015241|Ga0137418_10727777All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium756Open in IMG/M
3300015242|Ga0137412_10164373All Organisms → cellular organisms → Bacteria1785Open in IMG/M
3300015359|Ga0134085_10395024All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium620Open in IMG/M
3300016319|Ga0182033_10071745All Organisms → cellular organisms → Bacteria2442Open in IMG/M
3300016371|Ga0182034_10637647All Organisms → cellular organisms → Bacteria → Acidobacteria902Open in IMG/M
3300017934|Ga0187803_10478831All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium508Open in IMG/M
3300017940|Ga0187853_10005206All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae9146Open in IMG/M
3300017970|Ga0187783_11179819All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium551Open in IMG/M
3300017973|Ga0187780_10107602All Organisms → cellular organisms → Bacteria1922Open in IMG/M
3300017994|Ga0187822_10392625All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium510Open in IMG/M
3300018034|Ga0187863_10287619All Organisms → cellular organisms → Bacteria → Acidobacteria914Open in IMG/M
3300018086|Ga0187769_10148095All Organisms → cellular organisms → Bacteria1717Open in IMG/M
3300018088|Ga0187771_10147374All Organisms → cellular organisms → Bacteria1932Open in IMG/M
3300018088|Ga0187771_11379260All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium598Open in IMG/M
3300018468|Ga0066662_11944935All Organisms → cellular organisms → Bacteria → Acidobacteria615Open in IMG/M
3300020580|Ga0210403_11504389All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium506Open in IMG/M
3300020581|Ga0210399_10124728All Organisms → cellular organisms → Bacteria2117Open in IMG/M
3300020581|Ga0210399_10145654All Organisms → cellular organisms → Bacteria1958Open in IMG/M
3300020583|Ga0210401_10184457All Organisms → cellular organisms → Bacteria1943Open in IMG/M
3300020583|Ga0210401_10579637All Organisms → cellular organisms → Bacteria → Acidobacteria984Open in IMG/M
3300021088|Ga0210404_10735098All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium563Open in IMG/M
3300021171|Ga0210405_11330905All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium526Open in IMG/M
3300021180|Ga0210396_11557585All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium541Open in IMG/M
3300021405|Ga0210387_11626251All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium549Open in IMG/M
3300021407|Ga0210383_11205785All Organisms → cellular organisms → Bacteria → Acidobacteria636Open in IMG/M
3300021474|Ga0210390_11335779All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium573Open in IMG/M
3300021475|Ga0210392_10155331All Organisms → cellular organisms → Bacteria1567Open in IMG/M
3300021475|Ga0210392_11021004All Organisms → cellular organisms → Bacteria → Acidobacteria619Open in IMG/M
3300021478|Ga0210402_10476388All Organisms → cellular organisms → Bacteria → Acidobacteria1159Open in IMG/M
3300021478|Ga0210402_11972969All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium509Open in IMG/M
3300021479|Ga0210410_10027825All Organisms → cellular organisms → Bacteria → Acidobacteria4890Open in IMG/M
3300021559|Ga0210409_11520515All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium545Open in IMG/M
3300021560|Ga0126371_13741869All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium513Open in IMG/M
3300022712|Ga0242653_1072720All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium593Open in IMG/M
3300024246|Ga0247680_1004343All Organisms → cellular organisms → Bacteria2246Open in IMG/M
3300024331|Ga0247668_1119932All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium533Open in IMG/M
3300025916|Ga0207663_11656504All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium515Open in IMG/M
3300025929|Ga0207664_10992138All Organisms → cellular organisms → Bacteria → Acidobacteria753Open in IMG/M
3300026217|Ga0209871_1080396All Organisms → cellular organisms → Bacteria → Acidobacteria630Open in IMG/M
3300026312|Ga0209153_1277956All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium535Open in IMG/M
3300026314|Ga0209268_1041064All Organisms → cellular organisms → Bacteria1521Open in IMG/M
3300026329|Ga0209375_1084704All Organisms → cellular organisms → Bacteria1459Open in IMG/M
3300026854|Ga0207727_112684All Organisms → cellular organisms → Bacteria → Acidobacteria797Open in IMG/M
3300026880|Ga0209623_1003324All Organisms → cellular organisms → Bacteria → Acidobacteria893Open in IMG/M
3300027266|Ga0209215_1049610All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium580Open in IMG/M
3300027381|Ga0208983_1064757All Organisms → cellular organisms → Bacteria → Acidobacteria696Open in IMG/M
3300027505|Ga0209218_1095696All Organisms → cellular organisms → Bacteria → Acidobacteria619Open in IMG/M
3300027575|Ga0209525_1006773All Organisms → cellular organisms → Bacteria2667Open in IMG/M
3300027583|Ga0209527_1000201All Organisms → cellular organisms → Bacteria → Acidobacteria13624Open in IMG/M
3300027663|Ga0208990_1143629All Organisms → cellular organisms → Bacteria → Acidobacteria635Open in IMG/M
3300027701|Ga0209447_10220201All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium517Open in IMG/M
3300027745|Ga0209908_10006367All Organisms → cellular organisms → Bacteria → Acidobacteria1809Open in IMG/M
3300027846|Ga0209180_10564521All Organisms → cellular organisms → Bacteria → Acidobacteria632Open in IMG/M
3300027846|Ga0209180_10712201All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium545Open in IMG/M
3300027862|Ga0209701_10576354All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium601Open in IMG/M
3300027869|Ga0209579_10604473All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium595Open in IMG/M
3300027875|Ga0209283_10715012All Organisms → cellular organisms → Bacteria → Acidobacteria624Open in IMG/M
3300027875|Ga0209283_10821702All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium569Open in IMG/M
3300027902|Ga0209048_11038365All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium521Open in IMG/M
3300027908|Ga0209006_10104478All Organisms → cellular organisms → Bacteria2510Open in IMG/M
3300027911|Ga0209698_11046275All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas → unclassified Methylomonas → Methylomonas sp. LL1607Open in IMG/M
3300028906|Ga0308309_11246955All Organisms → cellular organisms → Bacteria → Acidobacteria640Open in IMG/M
3300028906|Ga0308309_11854338All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium509Open in IMG/M
3300029636|Ga0222749_10144660All Organisms → cellular organisms → Bacteria → Acidobacteria1154Open in IMG/M
3300029636|Ga0222749_10690495All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300030693|Ga0302313_10179812All Organisms → cellular organisms → Bacteria → Acidobacteria856Open in IMG/M
3300031446|Ga0170820_14751833All Organisms → cellular organisms → Bacteria → Acidobacteria791Open in IMG/M
3300031543|Ga0318516_10369479All Organisms → cellular organisms → Bacteria → Acidobacteria827Open in IMG/M
3300031679|Ga0318561_10151327All Organisms → cellular organisms → Bacteria1245Open in IMG/M
3300031720|Ga0307469_11629778All Organisms → cellular organisms → Bacteria → Acidobacteria620Open in IMG/M
3300031754|Ga0307475_10012626All Organisms → cellular organisms → Bacteria → Acidobacteria5687Open in IMG/M
3300031754|Ga0307475_11433338All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium531Open in IMG/M
3300031754|Ga0307475_11446791All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium528Open in IMG/M
3300031781|Ga0318547_10753049All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium606Open in IMG/M
3300031890|Ga0306925_10198924All Organisms → cellular organisms → Bacteria2161Open in IMG/M
3300031897|Ga0318520_10351064All Organisms → cellular organisms → Bacteria → Acidobacteria895Open in IMG/M
3300031946|Ga0310910_11071193All Organisms → cellular organisms → Bacteria → Acidobacteria628Open in IMG/M
3300031962|Ga0307479_10649046All Organisms → cellular organisms → Bacteria → Acidobacteria1036Open in IMG/M
3300032044|Ga0318558_10335792All Organisms → cellular organisms → Bacteria → Acidobacteria749Open in IMG/M
3300032059|Ga0318533_10496365All Organisms → cellular organisms → Bacteria → Acidobacteria895Open in IMG/M
3300032064|Ga0318510_10041610All Organisms → cellular organisms → Bacteria1592Open in IMG/M
3300032076|Ga0306924_10766676All Organisms → cellular organisms → Bacteria → Acidobacteria1078Open in IMG/M
3300032089|Ga0318525_10635304All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium544Open in IMG/M
3300032174|Ga0307470_11584184All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium547Open in IMG/M
3300032180|Ga0307471_101792278All Organisms → cellular organisms → Bacteria → Acidobacteria765Open in IMG/M
3300032261|Ga0306920_100535077All Organisms → cellular organisms → Bacteria1737Open in IMG/M
3300032828|Ga0335080_10677570All Organisms → cellular organisms → Bacteria → Acidobacteria1077Open in IMG/M
3300032893|Ga0335069_12665416All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium514Open in IMG/M
3300032955|Ga0335076_10782387All Organisms → cellular organisms → Bacteria → Acidobacteria836Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil21.68%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil13.99%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil9.09%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.90%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.90%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.20%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.50%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland3.50%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.80%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.80%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.80%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.80%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil2.10%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.10%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.10%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.10%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.40%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.40%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.40%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.40%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.40%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment0.70%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.70%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.70%
Thawing PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost0.70%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.70%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.70%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.70%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.70%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.70%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.70%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300000731Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34EnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300005159Soil and rhizosphere microbial communities from Laval, Canada - mgLPBEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005607Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006086Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010866Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300017934Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3EnvironmentalOpen in IMG/M
3300017940Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100EnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300017994Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022712Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024246Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21EnvironmentalOpen in IMG/M
3300024331Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026217Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)EnvironmentalOpen in IMG/M
3300026312Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)EnvironmentalOpen in IMG/M
3300026314Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026854Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 48 (SPAdes)EnvironmentalOpen in IMG/M
3300026880Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027266Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027381Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027505Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027575Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027583Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027663Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027701Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027745Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2MEnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027902Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030693Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2EnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032044Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032064Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032089Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F24TB_1085100223300000550SoilVERMKAMQKNATAVADAYRPELVEGDEPRYLRRQKPVEIRRK
JGI12381J11899_101651313300000731Tropical Forest SoilLERIKPIQRNSAASGAEQQRYQPDLLADDEPRYLRRQKPVEIRRKK
F14TB_10082795223300001431SoilVERMKAMQKNATAVADAYRPELVEGDEPRYLRRQKP
JGI12635J15846_1008691333300001593Forest SoilMKAISRGATAADAESYRPELLGDEEPRYLRRQKPV
JGI12635J15846_1025225313300001593Forest SoilVKAISRGAAAADAESYRPELLGDEEPRYLRRQKPVEIR
JGI12053J15887_1031128923300001661Forest SoilLERVKAMHRNGAADADSYRPELIADDEPRYLRRQKPVEI
C688J35102_12022324123300002568SoilLDRVKSMPRNASSADADSYRPELLGEDEPRYLRRQKPLEIR
JGI25617J43924_1004574533300002914Grasslands SoilLERVKAIQRNASAAAEADSYRPELIADDEPRYLRRQKPVE
Ga0062386_10107890923300004152Bog Forest SoilVERVKAIQKNAAIADAESYRPELVENDEPRYLRRQKPVEI
Ga0062386_10148776123300004152Bog Forest SoilVERVKAMPRNAAAADADSYRPDLLHEDEPRYLRRQKPVEIRRK
Ga0066808_102937813300005159SoilVERVKAMQRGNAAAAAEPYRPELLADEEPRYLRRQKPLEIRRKK
Ga0066677_1052820613300005171SoilLERVKAMQRNATAARDADSYRPELVADEEPRYLRRQKPVEIRRK
Ga0066690_1046827513300005177SoilMKAMQRNASAARDTDSYRPELVADEEPRYLRRQKPVEIRR
Ga0066682_1004536443300005450SoilMQRNATAAADASERYRPELISDDEPRYLRRQKPVEIRRKKLSGRG
Ga0073909_1054134323300005526Surface SoilMKVNKNSAAVADADAYRPELVESDEPKYLRRQKPVEIRR
Ga0066692_1033657413300005555SoilVERVKAIRKNAAVADGESYRPELVENDEPRYLRRQK
Ga0066706_1016975723300005598SoilVERVKAISRNAAAERDAYRPELVEDEPRYLRRLKLV*
Ga0070740_1040066823300005607Surface SoilVERVKAMQRNATAATDSDNFRPELVEDEPRYLRRQKPVEIRRKKFGAKNLSNFR
Ga0066903_10585602223300005764Tropical Forest SoilLERVKAMSRNAVRNAAAEAEQYRPELVDNDEPRYLRRQKP
Ga0068858_10233249623300005842Switchgrass RhizosphereLDRVKSIPRSASSADADSYRPELLGEDEPRYLRRQKPV
Ga0075019_1019603833300006086WatershedsLERVKPIQRNASAAAAEQEPYRPDLVTDEEPKYLRRQKPVE
Ga0070715_1014489533300006163Corn, Switchgrass And Miscanthus RhizosphereLERVKTMSRRASAAEAETYRPELLGDDEPRYLRRQKPLEIRRKK
Ga0070715_1026688313300006163Corn, Switchgrass And Miscanthus RhizosphereLERLKPIQRNASAAAAAEQESYRPELVTDEEPRYLRRQKPVEIRRKK
Ga0070716_10142467913300006173Corn, Switchgrass And Miscanthus RhizosphereLDRVKSMPRNASAADAESYRPELIAEDEPRYLRRQKPVEIR
Ga0073928_1119303113300006893Iron-Sulfur Acid SpringMARVKAMPGGAAGAAAAAEAENYRPELVTDEEPRYLR
Ga0075426_1003372513300006903Populus RhizosphereMQRNATAAAEAGERYRPELIADEEPRYLRRQKPVEIRRKKL
Ga0099793_1069341923300007258Vadose Zone SoilVKAMQRNASAAEADSYRPELVTDDEPRYLRRQKPVEIR
Ga0066710_10176413313300009012Grasslands SoilLERLKPTQRDAAADASERYRTELIADDEPRYLRRQKPVELRRKQRTWSGWAVW
Ga0066709_10005720313300009137Grasslands SoilMQRNATAAADASERYRPELISDDEPRYLRRQKPVEIR
Ga0126374_1089061513300009792Tropical Forest SoilVERVKAIERVAASAEADSYRPELVADDEPRYLRRQKPVEIRR
Ga0126380_1185703723300010043Tropical Forest SoilLERVKALPRGAAATAAADSYRPELLADEEPRYLRRQKPLEIRR
Ga0134084_1002481633300010322Grasslands SoilVKAMQRNATAARDADAYRPELITDEEPRYLRRQKPV
Ga0126372_1059222323300010360Tropical Forest SoilMQRNASAAAAAEQETYRPELVSDEEPKYLRRQKPV
Ga0126378_1018596933300010361Tropical Forest SoilLKPIQQNASAAAAAEQESYRPELVTDEEPRYLRRQKPVEIRR
Ga0126383_1325451313300010398Tropical Forest SoilMQRNASSAAAEQESYRPELVTDDEPKYLRRQKPVEIRRKKLGGR
Ga0126344_102062213300010866Boreal Forest SoilMERVKTISRNKSGLAEADSYRPELLTDEEPRYLRRQ
Ga0150983_1019820823300011120Forest SoilMARVKAMPRGAAAAAEAEQYRPELVTDEEPRYLRRQRPLEIR
Ga0150983_1467723413300011120Forest SoilLGVKSISRGSAAADAESYRPELLGDEEPRYLRRQKPVE
Ga0137393_1060461423300011271Vadose Zone SoilVKAIQRSTSGAAEADSYRPELLADDEPRYLRRQKPVEI
Ga0137389_1071351713300012096Vadose Zone SoilVKAIQRNASAAAEAESYRPELIADDEPRYLRRQKPVEIRR
Ga0137388_1192673923300012189Vadose Zone SoilMKIISRGASAVDAETYRPELLGDDEPRYLRRQKPV
Ga0137384_1097791023300012357Vadose Zone SoilVKAIQKNTAVADAEAYRPELVENDEPRYLRRQKPVEIRR
Ga0137360_1030474333300012361Vadose Zone SoilVKAMRRGGSVAADADSYRPELLADEEPRYLRRQKPLEI
Ga0137360_1138032523300012361Vadose Zone SoilVKPIQRNASAAAAEQESYRPDLVTDEEPKYLRRQKPVDIRRK
Ga0137358_1099244723300012582Vadose Zone SoilMQRNASAAAAEQESYRPDLVTDEEPKYLRRQKPVDIRRKKLGG
Ga0137398_1117843313300012683Vadose Zone SoilVERVKAISRNAAAERDAYRPELVEDEPRYLRRQKPVEIR
Ga0137397_1134669413300012685Vadose Zone SoilVKAIHRNASAAADADSYRPELITDDEPRYLRRQKPVEI
Ga0137413_1014249113300012924Vadose Zone SoilVKPIQRNASARAAEQESYRPDLVTDEEPKYLRRQKPVDIRRK
Ga0137416_1099331623300012927Vadose Zone SoilVERVKALPRNAAADSETYRPELVTDDEPRYLRRQKPVE
Ga0137407_1138950813300012930Vadose Zone SoilVERVKAISRNAAAERDAYRPELVEDEPRYLRRQKPVEIRRKKF
Ga0164303_1027375723300012957SoilLERVKTIHRNAAAADADTYRPEMIVDDEPRYLRRQKPVE
Ga0164301_1057916623300012960SoilVERVKATHKNAAAIADAEAYRPELVENEEPRYLRRQKPVEIRRK
Ga0134081_1024548023300014150Grasslands SoilVKAIPRNASAAEADSYRPELIADDEPRYLRRQKPVE
Ga0134078_1044839823300014157Grasslands SoilVERVKAISRNAAAERDAYRPELVEDEPRYLRRQKPVEIRR
Ga0137418_1072777733300015241Vadose Zone SoilVKAIPRNVSAAADADAYGPELMADDDPRYLRRQKP
Ga0137412_1016437313300015242Vadose Zone SoilLERVKLIQRNASAGAAEQESYRPDLITDEEPKYLRRQKPVDIRRKKL
Ga0134085_1039502423300015359Grasslands SoilVKAMQRNATAARDADSYRPELVADEEPRYLRRQKP
Ga0182033_1007174533300016319SoilVERVKPMQRNAYAAAAADQETYRPELVSDDEPRYLRRQKPVEIRR
Ga0182034_1063764713300016371SoilMKPIQRNSAAAGAEQQRYQPELLADDEPRYLRRQKPVEIRRKK
Ga0187803_1047883113300017934Freshwater SedimentMQRNSPAAAAADDQEPYRPELVADEEPRYLRRQKP
Ga0187853_1000520693300017940PeatlandLERLKPMQRNSSAAAAAADQEPYRPELVADEEPRYLRRQKPVEI
Ga0187783_1117981913300017970Tropical PeatlandMQRNATAAAADQEPYRPELVTDEEPRYLRRQKPVE
Ga0187780_1010760213300017973Tropical PeatlandLERLKPMQRNASAAAAEQETYRPELMTEDEPRYLRRQKPVEI
Ga0187822_1039262513300017994Freshwater SedimentLERVKAMQRSAAAAQEAEAYRPELIAEDEPRYLRRQKPVEI
Ga0187863_1028761913300018034PeatlandLERLKPIQRNSAAAAAAAADQEAYRPELVADEEPRYLRRQKPV
Ga0187769_1014809533300018086Tropical PeatlandLERVKPIQRNAAAAAAEQEPYRPELVSEDEPRYLRRQKPV
Ga0187771_1014737433300018088Tropical PeatlandVERVKPIQRNAIAAAAAEQDAYRPELVADDEPRYLRRQKPV
Ga0187771_1137926023300018088Tropical PeatlandVERVKPIQRNVSAAATEHEPYRPELIAEDEPRYLRRQKPVEIRRKK
Ga0066662_1194493513300018468Grasslands SoilLERLKPIQRNAIGAADAGPYRPELIAEDEPRYLRRQKP
Ga0210403_1150438913300020580SoilLERLKPIQRNSAAAAAAADQESYRPELIADEEPKFLRR
Ga0210399_1012472813300020581SoilLERVKPIQRNASATAAEQESYRPDLITDEEPKYLRRQKPVEIRRK
Ga0210399_1014565413300020581SoilLERVKPIQRNAAGAAADQEAYRPELIADEEPRYLRRQKPVEIRRK
Ga0210401_1018445733300020583SoilLERVKPIQRNTSIPAAAGSEPYRPELVTDDEPRYLRRQK
Ga0210401_1057963713300020583SoilLERVKTMQRNATAAAEADAYRPELIADDEPRYLRRQKPVEIR
Ga0210404_1073509823300021088SoilLERVKPIQRNASAAAAEQESYRPDLVTDEEPKYLRRQKPVE
Ga0210405_1133090523300021171SoilLERVKPIQRNASAAAAEQESYRPDLVTDEEPKYLRRQKPVEIRRK
Ga0210396_1155758523300021180SoilLERVKPIQRNASAAAAEQESYRPDLVTDEEPKYLRRQKPVDIRRKKLGG
Ga0210387_1162625113300021405SoilMQRNATAAAADHEPYRPELVSEDEPRYLRRQKPVE
Ga0210383_1120578513300021407SoilLERVKPIQRNAAGAAADQEAYRPELIADEEPRYLRR
Ga0210390_1133577923300021474SoilLERVKPVQRNASPSAAAGSEPYRPELVTDEEPRYLRRQKPVE
Ga0210392_1015533133300021475SoilMARVKAMPRGAAAAAAEAEQYRPELVTDEEPRYLRR
Ga0210392_1102100413300021475SoilLERVKPIQRNASAAATEQESYRPDLITDEEPKYLRRQKPV
Ga0210402_1047638813300021478SoilLERVKPIQRNASAAAAEQESYRPDLVTDEEPKYLRRQKPVD
Ga0210402_1197296923300021478SoilLERVKAMQRGNAATAAEPYRPELLADEEPRYLRRQ
Ga0210410_1002782513300021479SoilLERVKPIQRNASAAATEQESYRPDLITDEEPKYLRRQKPVDIRRKK
Ga0210409_1152051513300021559SoilLERVKPIQRNASAAAADQESYRPDLVTDEEPKYLRRQKPVEI
Ga0126371_1374186923300021560Tropical Forest SoilLERVKPMQRNVSAAAAEQETYRPELVTDEEPKYLRRQKPVEI
Ga0242653_107272013300022712SoilLERVKPIQRNASAGAAEQESYRPDLVTDEEPKYLRRQKPVEIRRKKLGGKTG
Ga0247680_100434333300024246SoilLERVKPIQRNASARAAEQESYRPDLVTDEEPKYLRRQKPVDIRRKKLGGSHGRF
Ga0247668_111993213300024331SoilLERVKALQRGTAAAASEPYRPELLADEEPRYLRRQKPLEIRRKKRG
Ga0207663_1165650413300025916Corn, Switchgrass And Miscanthus RhizosphereVGRVKAIAKNAGAVDSESYRPELVESDEPRYLRRQKPVEI
Ga0207664_1099213823300025929Agricultural SoilLERVKTMSRRATAAEAETYRPELLADEEPRYLRRQK
Ga0209871_108039613300026217Permafrost SoilMYRVKTISRNRGGAAEADSYRPELLADEEPRYLRRQ
Ga0209153_127795613300026312SoilLERLKPMQRNATAGAEASDRYRPELIPDDEPRYLRRQKPVE
Ga0209268_104106413300026314SoilLERLKPMQRNATAAADASERYRPELISDDEPRYLR
Ga0209375_108470413300026329SoilLERVKAIQRNASARAEADSYRPELIADDEPRYLRRQKPVEIR
Ga0207727_11268413300026854Tropical Forest SoilLERIKPIQRNSAASGAEQQRYQPDLLADDEPRYLRRQKPVE
Ga0209623_100332423300026880Forest SoilMERVKTLSRNKSGLAEADSYRPELLTDEEPRYLRRQRPVEIR
Ga0209215_104961023300027266Forest SoilLERIKPIQRNSTAGPAEQERYRSELMTDEEPRYLRRQKP
Ga0208983_106475713300027381Forest SoilLERVKPIQRNASAAAAEQESYRPDLVTDEEPKYLRRQKPVDIRRKK
Ga0209218_109569613300027505Forest SoilVERVKAMPRNAAAADDSYRADTVHEDEPRYLRRQKPVEIR
Ga0209525_100677313300027575Forest SoilLERVKPIQRNASAAAAEQESYRPDLLTDEEPKYLRRQKPVEIRRKKLGG
Ga0209527_1000201123300027583Forest SoilLERVKAIQRNASAAAEADSYRPEMMADDEPRYLRRQKPVE
Ga0208990_114362913300027663Forest SoilLERVKAIPRNVSAAAEADSYRPELMADDEPRYLRRQKP
Ga0209447_1022020123300027701Bog Forest SoilLERVKALQRNASAAADARSYSPDLLADEEPRYLRRQKPV
Ga0209908_1000636713300027745Thawing PermafrostMPGGAAAAEAEHYRPDLITDEEPRYLRRQKPLEIRRKKF
Ga0209180_1056452113300027846Vadose Zone SoilLERVKAIQRNASAAAEADSYRPELIADDEPRYLRRQKPVEIR
Ga0209180_1071220113300027846Vadose Zone SoilLERLKPIQRNAIGAADAEPYRPELISEDEPRYLRRQKPVEIRR
Ga0209701_1057635423300027862Vadose Zone SoilLERVKPIQRNASAAAAEQESYRPDLVTDEEPKYLRRQKPVDIRRKKLG
Ga0209579_1060447313300027869Surface SoilLERVKPMQRNASAAAADQEAYRPELVTDEEPKYLRRQKPVEIRRKKLS
Ga0209283_1071501213300027875Vadose Zone SoilLERVKAIQRNAPVVAEADSYRPELIADDEPRYLHRQK
Ga0209283_1082170223300027875Vadose Zone SoilLERLKSIQRNAIGAADAEPYRPELIAEDEPRYLRR
Ga0209048_1103836513300027902Freshwater Lake SedimentLERLKPIQRNVAAATAEHEAYRPELISEEEPKFLR
Ga0209006_1010447843300027908Forest SoilMARVKAMRAGGGGGAAAADAEQYRPELVTDEEPRYLRRQKPLEIRRKK
Ga0209698_1104627513300027911WatershedsLERVKAMQRNASAAVDAEAYRPELIADDEPRYLRRQKPVEI
Ga0308309_1124695513300028906SoilLERVKALQRNAAAAEADAYRPKLIADDEPRYLRRQKPVEI
Ga0308309_1185433813300028906SoilMERVKTISRNKSGLAEADAYRPELLTDEEPRYLRRQR
Ga0222749_1014466033300029636SoilLERVKPIQRNASAAATEQESYRPDLITDEEPKYLR
Ga0222749_1069049523300029636SoilLERVKPIQRNASAAAADQESYRPDLVTDEEPKYLRRQKPVEIRRKKLGGKT
Ga0302313_1017981223300030693PalsaMARVKAMPGGAAAAEAENYRPELITDEEPRYLRRQRPLEIRRKKF
Ga0170820_1475183313300031446Forest SoilVERVKAMPRNAAAADDSYRADTAHEDEPRYLRRQKPVEIRRKK
Ga0318516_1036947923300031543SoilLERLKPMQRNATAAAEAGERYRPELVGDDEPRYLRRQKPV
Ga0318561_1015132733300031679SoilMKPMQRNATAAAADQERYRPELLADDEPRYLRRQK
Ga0307469_1162977823300031720Hardwood Forest SoilLERVKAMHRNASAADADSYRPELMADDEPRYLRRQKP
Ga0307475_1001262663300031754Hardwood Forest SoilLERVKPIQRNASAAAAEQESYRPDLLTDEEPKYLRRQKPVDIRRKK
Ga0307475_1143333813300031754Hardwood Forest SoilLERVKSISRGATAADAETYRPELLGDDEPRYLRRQ
Ga0307475_1144679113300031754Hardwood Forest SoilLERVKTMPRASAADSETYRPELLGDEEPRYLRRQK
Ga0318547_1075304913300031781SoilLERLKPMQRNSSAAADQEAYRPELVADEEPRYLRRQKPVEIRRK
Ga0306925_1019892413300031890SoilLERVKPIQRNASTSAAAGSEPYRPELIADEEPRYL
Ga0318520_1035106423300031897SoilLERVKPIQRNAATSAAAGSEPYRPELIADEEPRYLRRQ
Ga0310910_1107119323300031946SoilLERLKPMQRNASAAAAEQETYRPDLVTDDEPKYLRRQKPVEIRRKK
Ga0307479_1064904623300031962Hardwood Forest SoilMERIKILSRNKSGLAEAESYRPELLTDEEPRYLRRQKP
Ga0318558_1033579213300032044SoilMKPMQRNATAAAADQERYRPELLAEDEPRYLRRQKPVEIRR
Ga0318533_1049636523300032059SoilVERVKPMQRNAYAAAAADQETYRPELVSDDEPRYLRRQ
Ga0318510_1004161013300032064SoilMKPMQRNATAAAADQERYRPELLAEDEPRYLRRQKPVEIR
Ga0306924_1076667623300032076SoilLERVKPMQRNVAAAAAAEQETYRPELATDDEPRYLRRQKPVEIRRKK
Ga0318525_1063530423300032089SoilMKPMQRNATAAAADQERYRPELLAEDEPRYLRRQK
Ga0307470_1158418413300032174Hardwood Forest SoilVGRVKAIQKNAAVADAEAYRPELVENDEPRYLRRQKPVEIR
Ga0307471_10179227823300032180Hardwood Forest SoilLERVKAMHRNASAADADSYRPELMADDEPRYLRRQKPVEIR
Ga0306920_10053507713300032261SoilMKPMQRNSAAAAADQERYRPELLADDEPRYLRRQK
Ga0335080_1067757013300032828SoilLERVKAMQQASAAAAAEAYHPELLADEEPRYLRRQKPLE
Ga0335069_1266541623300032893SoilLERVKPMQRNASATAAEQEAYRPELVTDEEPKYLR
Ga0335076_1078238723300032955SoilLERVKPMQRNASAAAAAEQETYRPELVTDDEPRYLRRQKPVEIRRKKFS


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