Metagenome Family F052228

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052228
Family Type	Metagenome
Number of Sequences	143
Average Sequence Length	59 residues
Representative Sequence	VISGRQIEVVGGTNGLRALHLKCSTPGCFSTPADWILPVKSDTVREIDIRFRDNGA
Number of Associated Samples	117
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.10 %
% of genes near scaffold ends (potentially truncated)	96.50 %
% of genes from short scaffolds (< 2000 bps)	92.31 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.601 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (27.972 % of family members)
Environment Ontology (ENVO)	Unclassified (37.762 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.951 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 25.00% Coil/Unstructured: 75.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF00196	GerE	3.50
PF00589	Phage_integrase	2.10
PF00106	adh_short	1.40
PF00989	PAS	1.40
PF00534	Glycos_transf_1	1.40
PF01128	IspD	1.40
PF00069	Pkinase	1.40
PF03734	YkuD	0.70
PF02894	GFO_IDH_MocA_C	0.70
PF14026	DUF4242	0.70
PF07730	HisKA_3	0.70
PF00551	Formyl_trans_N	0.70
PF02518	HATPase_c	0.70
PF07087	DUF1353	0.70
PF13673	Acetyltransf_10	0.70
PF11159	DUF2939	0.70
PF07995	GSDH	0.70
PF00211	Guanylate_cyc	0.70
PF14559	TPR_19	0.70
PF08161	NUC173	0.70
PF02397	Bac_transf	0.70
PF01292	Ni_hydr_CYTB	0.70
PF13561	adh_short_C2	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	5.59
COG0746	Molybdopterin-guanine dinucleotide biosynthesis protein A	Coenzyme transport and metabolism [H]	1.40
COG1207	Bifunctional protein GlmU, N-acetylglucosamine-1-phosphate-uridyltransferase/glucosamine-1-phosphate-acetyltransferase	Cell wall/membrane/envelope biogenesis [M]	1.40
COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	Lipid transport and metabolism [I]	1.40
COG2068	CTP:molybdopterin cytidylyltransferase MocA	Coenzyme transport and metabolism [H]	1.40
COG2148	Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)	Cell wall/membrane/envelope biogenesis [M]	0.70
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.70
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.70
COG4117	Thiosulfate reductase cytochrome b subunit	Inorganic ion transport and metabolism [P]	0.70
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.70
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.70
COG3658	Cytochrome b subunit of Ni2+-dependent hydrogenase	Energy production and conversion [C]	0.70
COG3038	Cytochrome b561	Energy production and conversion [C]	0.70
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.70
COG2864	Cytochrome b subunit of formate dehydrogenase	Energy production and conversion [C]	0.70
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.70
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.70
COG1969	Ni,Fe-hydrogenase I cytochrome b subunit	Energy production and conversion [C]	0.70
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.70
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.70

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.60 %
Unclassified	root	N/A	1.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.60 %
Unclassified	root	N/A	1.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.60 %
Unclassified	root	N/A	1.40 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	88.11 %
Unclassified	root	N/A	1.40 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.70 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.70 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	88.11 %
Unclassified	root	N/A	1.40 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	76.22 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	4.90 %
Unclassified	root	N/A	1.40 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	76.22 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	4.90 %
Unclassified	root	N/A	1.40 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	76.22 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	2.80 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	2.10 %
Unclassified	root	N/A	1.40 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	76.22 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	2.80 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	2.10 %
Unclassified	root	N/A	1.40 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	76.22 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2.80 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	2.10 %
Unclassified	root	N/A	1.40 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459009\|GA8DASG01AI9LT	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300000955\|JGI1027J12803_105173304	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	719	Open in IMG/M
3300000956\|JGI10216J12902_124519912	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	598	Open in IMG/M
3300002128\|JGI24036J26619_10020809	Not Available	1217	Open in IMG/M
3300002128\|JGI24036J26619_10025178	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1116	Open in IMG/M
3300004479\|Ga0062595_100551157	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	883	Open in IMG/M
3300004479\|Ga0062595_101885954	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	572	Open in IMG/M
3300005167\|Ga0066672_10147226	All Organisms → cellular organisms → Bacteria	1475	Open in IMG/M
3300005167\|Ga0066672_10623783	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	698	Open in IMG/M
3300005171\|Ga0066677_10579963	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	639	Open in IMG/M
3300005175\|Ga0066673_10122839	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1419	Open in IMG/M
3300005176\|Ga0066679_10115314	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1650	Open in IMG/M
3300005177\|Ga0066690_10156441	All Organisms → cellular organisms → Bacteria	1500	Open in IMG/M
3300005177\|Ga0066690_10790892	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	617	Open in IMG/M
3300005179\|Ga0066684_10006917	All Organisms → cellular organisms → Bacteria	5215	Open in IMG/M
3300005179\|Ga0066684_10107304	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1720	Open in IMG/M
3300005179\|Ga0066684_10638547	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	715	Open in IMG/M
3300005187\|Ga0066675_10107030	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1856	Open in IMG/M
3300005187\|Ga0066675_10645240	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	795	Open in IMG/M
3300005187\|Ga0066675_10935998	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	653	Open in IMG/M
3300005187\|Ga0066675_11321744	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	531	Open in IMG/M
3300005289\|Ga0065704_10675387	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300005290\|Ga0065712_10435870	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	699	Open in IMG/M
3300005294\|Ga0065705_11108453	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
3300005347\|Ga0070668_100373681	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1212	Open in IMG/M
3300005355\|Ga0070671_100040689	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3861	Open in IMG/M
3300005355\|Ga0070671_100819994	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	811	Open in IMG/M
3300005356\|Ga0070674_100032199	All Organisms → cellular organisms → Bacteria	3480	Open in IMG/M
3300005364\|Ga0070673_100542520	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1056	Open in IMG/M
3300005366\|Ga0070659_100720427	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	864	Open in IMG/M
3300005435\|Ga0070714_100684641	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	989	Open in IMG/M
3300005447\|Ga0066689_10504959	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	763	Open in IMG/M
3300005450\|Ga0066682_10191597	All Organisms → cellular organisms → Bacteria	1309	Open in IMG/M
3300005451\|Ga0066681_10295777	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	990	Open in IMG/M
3300005451\|Ga0066681_10761296	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	586	Open in IMG/M
3300005454\|Ga0066687_10437209	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	763	Open in IMG/M
3300005456\|Ga0070678_100211041	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1609	Open in IMG/M
3300005456\|Ga0070678_100859713	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	827	Open in IMG/M
3300005458\|Ga0070681_11779248	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300005540\|Ga0066697_10170770	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1289	Open in IMG/M
3300005540\|Ga0066697_10525995	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	667	Open in IMG/M
3300005545\|Ga0070695_101012465	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	676	Open in IMG/M
3300005546\|Ga0070696_100245109	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300005548\|Ga0070665_102265085	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	547	Open in IMG/M
3300005549\|Ga0070704_101404372	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	641	Open in IMG/M
3300005552\|Ga0066701_10156179	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1377	Open in IMG/M
3300005553\|Ga0066695_10255174	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1107	Open in IMG/M
3300005574\|Ga0066694_10591860	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	517	Open in IMG/M
3300005576\|Ga0066708_10688096	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300005576\|Ga0066708_10785030	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	598	Open in IMG/M
3300005764\|Ga0066903_109129175	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300005843\|Ga0068860_100616402	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1091	Open in IMG/M
3300006031\|Ga0066651_10229300	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	985	Open in IMG/M
3300006046\|Ga0066652_101423121	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	647	Open in IMG/M
3300006046\|Ga0066652_101680027	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	580	Open in IMG/M
3300006163\|Ga0070715_10297058	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300006173\|Ga0070716_100096434	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1802	Open in IMG/M
3300006794\|Ga0066658_10208697	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1035	Open in IMG/M
3300006796\|Ga0066665_10440693	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1075	Open in IMG/M
3300006796\|Ga0066665_11227156	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	573	Open in IMG/M
3300006881\|Ga0068865_101134112	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	690	Open in IMG/M
3300009012\|Ga0066710_104130564	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300009137\|Ga0066709_100803690	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1363	Open in IMG/M
3300009147\|Ga0114129_12237326	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	657	Open in IMG/M
3300009176\|Ga0105242_11436201	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	719	Open in IMG/M
3300010303\|Ga0134082_10497976	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300010325\|Ga0134064_10160643	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	783	Open in IMG/M
3300010337\|Ga0134062_10093921	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1280	Open in IMG/M
3300010373\|Ga0134128_10600947	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1224	Open in IMG/M
3300010375\|Ga0105239_11118241	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	907	Open in IMG/M
3300010401\|Ga0134121_10537311	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1083	Open in IMG/M
3300010401\|Ga0134121_11066535	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	798	Open in IMG/M
3300012198\|Ga0137364_10495342	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	918	Open in IMG/M
3300012200\|Ga0137382_10115295	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1789	Open in IMG/M
3300012200\|Ga0137382_11157037	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	551	Open in IMG/M
3300012201\|Ga0137365_10327031	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1134	Open in IMG/M
3300012203\|Ga0137399_10446125	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1082	Open in IMG/M
3300012203\|Ga0137399_11337970	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	601	Open in IMG/M
3300012207\|Ga0137381_10737522	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	855	Open in IMG/M
3300012208\|Ga0137376_10344635	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1294	Open in IMG/M
3300012208\|Ga0137376_11404682	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	589	Open in IMG/M
3300012210\|Ga0137378_11616716	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	556	Open in IMG/M
3300012351\|Ga0137386_10781522	Not Available	686	Open in IMG/M
3300012361\|Ga0137360_11179269	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	662	Open in IMG/M
3300012582\|Ga0137358_10541791	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	783	Open in IMG/M
3300012685\|Ga0137397_10710554	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	747	Open in IMG/M
3300012918\|Ga0137396_10748956	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	719	Open in IMG/M
3300012930\|Ga0137407_11884319	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	570	Open in IMG/M
3300012955\|Ga0164298_10036273	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2262	Open in IMG/M
3300012977\|Ga0134087_10190987	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	912	Open in IMG/M
3300012985\|Ga0164308_11787742	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300012989\|Ga0164305_10145835	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1599	Open in IMG/M
3300012989\|Ga0164305_11618311	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	579	Open in IMG/M
3300013297\|Ga0157378_10718623	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1020	Open in IMG/M
3300013306\|Ga0163162_12504408	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	593	Open in IMG/M
3300014150\|Ga0134081_10325248	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	558	Open in IMG/M
3300014166\|Ga0134079_10680962	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	522	Open in IMG/M
3300014166\|Ga0134079_10694058	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300015242\|Ga0137412_10288473	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300015264\|Ga0137403_10047021	All Organisms → cellular organisms → Bacteria	4467	Open in IMG/M
3300015264\|Ga0137403_10910974	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300015357\|Ga0134072_10021553	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1612	Open in IMG/M
3300015357\|Ga0134072_10315125	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300015372\|Ga0132256_103039576	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	564	Open in IMG/M
3300015373\|Ga0132257_103911041	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	542	Open in IMG/M
3300017792\|Ga0163161_10077266	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2445	Open in IMG/M
3300018027\|Ga0184605_10378431	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	636	Open in IMG/M
3300018051\|Ga0184620_10196791	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	668	Open in IMG/M
3300018433\|Ga0066667_12193058	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
3300018468\|Ga0066662_10531279	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1081	Open in IMG/M
3300018482\|Ga0066669_10277067	All Organisms → cellular organisms → Bacteria	1345	Open in IMG/M
3300018482\|Ga0066669_10304327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1296	Open in IMG/M
3300019879\|Ga0193723_1159821	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	596	Open in IMG/M
3300019881\|Ga0193707_1145208	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	668	Open in IMG/M
3300021411\|Ga0193709_1010412	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2312	Open in IMG/M
3300021413\|Ga0193750_1054418	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	828	Open in IMG/M
3300022756\|Ga0222622_10916684	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	643	Open in IMG/M
3300025898\|Ga0207692_10146934	All Organisms → cellular organisms → Bacteria	1346	Open in IMG/M
3300025906\|Ga0207699_11090271	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	591	Open in IMG/M
3300025928\|Ga0207700_11329057	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	640	Open in IMG/M
3300025929\|Ga0207664_11119903	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	703	Open in IMG/M
3300025929\|Ga0207664_11227012	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	668	Open in IMG/M
3300025933\|Ga0207706_11211012	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	627	Open in IMG/M
3300025937\|Ga0207669_11039883	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	689	Open in IMG/M
3300025960\|Ga0207651_10062107	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2602	Open in IMG/M
3300026023\|Ga0207677_11516986	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	619	Open in IMG/M
3300026089\|Ga0207648_10356492	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1319	Open in IMG/M
3300026142\|Ga0207698_10587519	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1096	Open in IMG/M
3300026305\|Ga0209688_1100428	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	537	Open in IMG/M
3300026308\|Ga0209265_1055791	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1208	Open in IMG/M
3300026529\|Ga0209806_1202999	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	689	Open in IMG/M
3300026530\|Ga0209807_1128346	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1015	Open in IMG/M
3300026538\|Ga0209056_10140628	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1872	Open in IMG/M
3300026540\|Ga0209376_1223508	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	831	Open in IMG/M
3300026550\|Ga0209474_10751844	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300026552\|Ga0209577_10164044	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1736	Open in IMG/M
3300026555\|Ga0179593_1171157	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3364	Open in IMG/M
3300027050\|Ga0209325_1046190	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300028536\|Ga0137415_10047746	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4165	Open in IMG/M
3300028819\|Ga0307296_10773294	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	524	Open in IMG/M
3300031720\|Ga0307469_10046594	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2688	Open in IMG/M
3300031753\|Ga0307477_10255499	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1214	Open in IMG/M
3300031962\|Ga0307479_11504314	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	630	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.12%
Host-Associated	Host-Associated	18.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.02%
Plants	Host-Associated → Plants	18.88%
Aquatic	Environmental → Aquatic	2.10%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.02%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.49%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.39%
Sediment	Environmental → Aquatic → Sediment	2.10%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.83%
Loam	Environmental → Terrestrial → Soil → Loam	11.19%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.69%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.10%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.40%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	34.27%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.07%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.10%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.10%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.40%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.40%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	27.97%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.29%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.20%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.10%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.10%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.40%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.40%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.40%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.40%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.70%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.70%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.70%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027050	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F47_12624220	2170459009	Grass Soil	MEVVGGTNGLRALRLKCSTPGCFSTPADWTVPVKSDAVRETDMLFRDNGA
JGI1027J12803_1051733041	3300000955	Soil	LDKGRAWNSLDDQLYCTVCKNVISGRQIKVVGGTNGLRALHLKCSTPGCSSTPRDWTLPVKSDIVHEIDILFRDDAV*
JGI10216J12902_1245199122	3300000956	Soil	AALRRIDKIRAWNSLDDQLYCTICKSVISGRQIEVVGGTNGLRALHLKCFTPGCLSTPADWILPVKSDAVREIDILFRDNGA*
JGI24036J26619_100208091	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	DQLYCTLCKSVISGRQIEVVGGANRLRAMRLKCSTPGCFSTPADWTLPVKSDSVRQIDFFFRDEDF*
JGI24036J26619_100251783	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	TICKREISGRQIEVVGGTNGLRALHLKCSTPGCFSTPADWILPVKSDTVREIDIRFRDNGA*
Ga0062595_1005511572	3300004479	Soil	NGLRALHLKCSTPGCFSTPADWILPVKSDTVREIDILFRDNGT*
Ga0062595_1018859543	3300004479	Soil	TNGLRALHLKCSTPGCLSTPADWIVPVKPETVREIDFLFRDNGA*
Ga0066672_101472261	3300005167	Soil	QIEVVGGTNGLRALHLKCSTPGCLSTPADWILPVKSVTVREIDFLFRDNGA*
Ga0066672_106237831	3300005167	Soil	TICKRVVSGRQIEVVGGTNGLRALHLKCSTPGCLSTPADWIMPVKSDTGGEIDFLFRDNGA*
Ga0066677_105799631	3300005171	Soil	KSVISGRQIEVVGGTNGLRALHLKCSTPGCFSTPADWILPVKSDTVRGIDIFFRDNGV*
Ga0066673_101228392	3300005175	Soil	MAAEDKLATLRRLDESRAWKSLSDRLYCTICKRVISGCQIKVVGGTNGLRALHLKCSTPDCLSTPADWIVPIKSDTRGEIDALFRDNGA*
Ga0066679_101153141	3300005176	Soil	RAWNSLDDQLYCTICKSVISGRQIEVVGGTNGLRALHLKCSTPGCFSTPADWLLPVKSDTVREIDILFRDNGA*
Ga0066690_101564413	3300005177	Soil	GGTNGLRALHLKCSTAGCLSTPADWILPDKLDTVREIDILFRDNGA*
Ga0066690_107908921	3300005177	Soil	ISGRQIEVVGGTNGLRALHLKCSTPGCFSTPADWILPVKSDTVREINILFRDNGA*
Ga0066684_100069171	3300005179	Soil	VISGRQIEVVGGTNGLRALHLKCSTPGCFSTPADWILPVKSDTVREIDIRFRDNGA*
Ga0066684_101073041	3300005179	Soil	ICKHEISGRQLEVVGGTNGLRALHLRCSTPGCLSTPADWLFPFKSDTVREIDILFRDNGA
Ga0066684_106385472	3300005179	Soil	CIICKNVISGRRIEVVGGTNGLRALHIKCSTPGCFSTPADWIVPVKPETVREIDFLFRDNGA*
Ga0066675_101070303	3300005187	Soil	ISGRQIEVVGGTNGLRALHLKCSTPDCLSTPADWILPVKSDTVREIDIRFRENSA*
Ga0066675_106452402	3300005187	Soil	ISGRQIEVVGGTNGLRALHLKCSTPDCLSTPADWILPVKCDTVREIDILFRDNSA*
Ga0066675_109359983	3300005187	Soil	LRALHLKCSTPGCLSAPADWIVPVKPETVREIDFLFRDNGA*
Ga0066675_113217442	3300005187	Soil	ISGRQIEVVGGTNGLRALHLKCSTPGCLSTPADWIMPVKSDTGGEIDFFFRDNGA*
Ga0065704_106753872	3300005289	Switchgrass Rhizosphere	SGRQIEVVGGTNGLRALHLKCSTPGCLSTPADWILPVKSETVREIDFLFRDDDF*
Ga0065712_104358701	3300005290	Miscanthus Rhizosphere	LRRLDKSRAWNSLDDQLYCTLCKSVISGRQIEVVGGANRLRAMRLKCSTPGCFSTPADWTLPVKSDSVRQIDFFFRDEDF*
Ga0065705_111084531	3300005294	Switchgrass Rhizosphere	RRLDKGRAWNSLDDQLYCTICKNIISGRQIEVVGGTNGLRALRLKCSTPGCFSTPADWILPVKLDAVGEIDILFRDNGA*
Ga0070668_1003736812	3300005347	Switchgrass Rhizosphere	LDDQLYCTVCKNVISGRQIAVVGGTNGLRALHIKCSTPGCFATPADWILPVKSETVREIDFLFRDNGF*
Ga0070671_1000406892	3300005355	Switchgrass Rhizosphere	RAWNSLDDQLYCTVCKNVISGRQIAVVGGTNGLRALHIKCSTPGCLSTPADWLLPVKSDTVPEIDFLFRDNGA*
Ga0070671_1008199941	3300005355	Switchgrass Rhizosphere	VISGRQIEVVGGTNGLRALHLKCSTPGCFSTPADWLVPVKSDTVREIDILFRDNGA*
Ga0070674_1000321994	3300005356	Miscanthus Rhizosphere	VISGRQIEVVGGANRLRAMRLKCSTPGCFSTPADWTLPVKSDSVRQIDFFFRDEDF*
Ga0070673_1005425201	3300005364	Switchgrass Rhizosphere	CKNVISGRQIAVVGGTNGLRALHIKCSTPGCFATPADWILPVKSETVREIDFLFRDNGF*
Ga0070659_1007204272	3300005366	Corn Rhizosphere	TNGLRALHLKCSTPGCFSTPADWILPVKSDTVREIDSLFRDNGA*
Ga0070714_1006846411	3300005435	Agricultural Soil	IEVVGGTNGLRALRLKCSTPGCLSTPADWILPVKSDTVLEMDFLFRDNGF*
Ga0066689_105049592	3300005447	Soil	GRQIEVVGGTNGLRALRLKCSTPDCPSTPADWILPVKSDAVREIDILFRDNGA*
Ga0066682_101915971	3300005450	Soil	VISGRQIEVVGGTNGLRALHLKCSTPGCLSTPADWILPVKSVTVREIDFLFRDNGA*
Ga0066681_102957771	3300005451	Soil	MAAEDKLATLRRLDESRAWKSLSDRLYCTICKRVISGCQIKVVGGTNGLRALHLKCSTPDCLSTPADWIVPI
Ga0066681_107612961	3300005451	Soil	VISGRQIEVVGGTNGLRALHLKCSTPGCLSTPADWIVPVRSDTGGEIDFFFRDNGA*
Ga0066687_104372091	3300005454	Soil	VISGRQIEVVGGTNGLRALHLKCSTPGCFSTPADWILPVKSDTVREIDIFFRDNGV*
Ga0070678_1002110411	3300005456	Miscanthus Rhizosphere	GTNGLRARRLKCSTPGCYSTPADWTLPVKSDTIREIDILFRDNGV*
Ga0070678_1008597133	3300005456	Miscanthus Rhizosphere	VVGGTNGLRALHIKCSTPGCFATPADWILPVKSETVREIDFLFRDNGF*
Ga0070681_117792481	3300005458	Corn Rhizosphere	LRALHLKCSTPGCFSTPADWILPVKSDTVREIDIRFRDNGA*
Ga0066697_101707701	3300005540	Soil	GTNGLRALHLKCSTPGCFSTPADWILPVKSDTVREIDMLFRDNGA*
Ga0066697_105259951	3300005540	Soil	VYCTICKHEISGRQLEVVGGTNGLRALHLRCSTPGCLSTPADWLFPFKSDTVREIDILFRDNGA*
Ga0070695_1010124651	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	YCTICKTVISGRQIEVVGGTNGLRALHLKCSTPGCFSTPADWILPVKSDTVREIDSLFRDNGA*
Ga0070696_1002451091	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	IEVVGGANRLRAMRLKCSTPGCFSTPADWTLPVKSDSVRQIDFFFRDEDF*
Ga0070665_1022650851	3300005548	Switchgrass Rhizosphere	GTNGLRALHIKCSTPGCFATPADWILPVKSETVREIDFLFRDNGF*
Ga0070704_1014043722	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	KSVISGRQIEVVGGTNGLRALHLKCSTPGCFSTPADWILPVKSDIVREIDIRFRDNGA*
Ga0066701_101561791	3300005552	Soil	WSSLDDQLYCTICKSVISGRQIEVVGGTNGLRALHLKCSTPGCFSTPADWILPVKSDTVRGIDIFFRDNGV*
Ga0066695_102551741	3300005553	Soil	QIEVVGGTNGLRALHLKCSTPDCLSTPADWILPVKTDTVREIDILFRDNGA*
Ga0066694_105918602	3300005574	Soil	KSVISGRQIEVVGGTNGLRALHLKCSTPGCLSTPADWILPVKSVTVREIDFLFRDNGA*
Ga0066708_106880961	3300005576	Soil	LRALHLKCSTPGCLSAPADWIVPVKPETVREIDFLFRDNGF*
Ga0066708_107850302	3300005576	Soil	LRRIDKSRPWTSLDDQLYCTICKSVISGRQIEVVGGTNGLRALHLKCSTPGCFSTPADWILPVKSDTVREIDMLFRDNGA*
Ga0066903_1091291751	3300005764	Tropical Forest Soil	TNGLRALHLKCSTPGCLSTPAEWLLPRKPDDGCEIDILFRDNGR*
Ga0068860_1006164021	3300005843	Switchgrass Rhizosphere	SRAWNCLDDRLYCTICKREISGRQIEVVGGTNGLRALHLKCSTPGCFSTPADWILPVKSDIVREIDIRFRDNGA*
Ga0066651_102293003	3300006031	Soil	QIEVVGGTNGLRALHLKCSTAGCLSTPADWILPVKSDSVREIDILFRDNGA*
Ga0066652_1014231213	3300006046	Soil	TICKKVISGRQIEVVGGSNGLRALRLKCSTFGCFSTPADWILPVKSDTVPEFDLLFRDNGA*
Ga0066652_1016800271	3300006046	Soil	IEVVGGTNGLRALRLKCSTPGCLSTPADWLFPVKSDTVREIDILFRDNGA*
Ga0070715_102970581	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	DQLYCTICKTVISGRHIEVVGGANGLRAMRLKCSTPGCFSTPADWTLPVKSDSVRQIDFFFRDEDF*
Ga0070716_1000964341	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	CKNVISGRQIAVVGGTNGLRALHIKCSTPGCLSTPADWLLPVKSDTVPEIDFLFRDNGA*
Ga0066658_102086971	3300006794	Soil	LAALRRLDKSRAWKTLDDQLYCTGCKTVISGRRIEVVGGTNGLRALHLKCSTPGCFSTPGDWILPVKPETVREIDFLFRDNGA*
Ga0066665_104406933	3300006796	Soil	RIDKSRPWTSLDDQLYCTICKSVISGRQIEVVGGTNGLRALHLKCSTPGCFSTPADWILPVKSDTVREIDIFFRDNGV*
Ga0066665_112271561	3300006796	Soil	ICKNVISGRKIEVVGGTNGLRALHIKCSTPGCFSTPGDWILPVKPETVREIDFLFRDNGA
Ga0068865_1011341121	3300006881	Miscanthus Rhizosphere	KTVISGRQIEVVGGTNGLRALHLKCSTPGCFSTPADWILPVKSDTVREIDSLFRDNGA*
Ga0066710_1041305641	3300009012	Grasslands Soil	KCSTPDCPSTPADWILPVKSDAVREIDILFSDNGA
Ga0066709_1008036901	3300009137	Grasslands Soil	TICKHEISGRQLEVVGGTNGLRALHLRCSTPGCLSTPADWLFPFKSDTVREIDILFRDNGA*
Ga0114129_122373261	3300009147	Populus Rhizosphere	VISGRQIEVVGTNGLRALHLKCPTPGCLSTPVDWILPVKPETAREIDFLFRDNVREAPDLAG*
Ga0105242_114362013	3300009176	Miscanthus Rhizosphere	NGLRALHLKCSTPGCFSTPADWILPVKSDTVREIDIRFRDNGA*
Ga0134082_104979761	3300010303	Grasslands Soil	ISGRQLEVVGGTNGLRALHLRCSTPGCLSTPADWLFPFKSDTVREIDILFRDNGA*
Ga0134064_101606431	3300010325	Grasslands Soil	RPWNSLDNRVYCTICKSVISGRQIEVVGGTNGLRALHLKCSTPDCSSTPADWILPVKSDTVREIDILFRDNGA*
Ga0134062_100939214	3300010337	Grasslands Soil	VISGRQIEVVGGTNGLRALHLKCSTADCLSTPADWILPVKSDTVREIDILFRDNGA*
Ga0134128_106009471	3300010373	Terrestrial Soil	SRAWNSLDDQLYCTVCKNVISGRQIAVVGGTNGLRALHIKCSTPGCFATPADWILPVKSETVREIDFLFRDNGF*
Ga0105239_111182412	3300010375	Corn Rhizosphere	VVGGTNGLRALHIKCSTPGCLSTPADWLLPVKSDTVPEIDFLFRDNGA*
Ga0134121_105373112	3300010401	Terrestrial Soil	ALRRLDKSRAWNSLDDQLYCTICKNVISGSQIEVVGGTNGLRALRLKCSTPGCFATPADWILPVKSETVREIDFLFRDNGF*
Ga0134121_110665351	3300010401	Terrestrial Soil	ALRLKCSTPGCFSTLADWTSPVKSDTVREIDILFRDNGA*
Ga0137364_104953422	3300012198	Vadose Zone Soil	ISGRQIEVVGGTNGLRALHLKCSTPDCLSTPADWILPVKTDTVREIDILFRDNGA*
Ga0137382_101152952	3300012200	Vadose Zone Soil	NGLRALHLKCSTPGCFSTPADWLLPVKSDTVCEIDIVFRDNGV*
Ga0137382_111570372	3300012200	Vadose Zone Soil	CSTPGCLSTPADWILPVKSDTGGEINFLFRDNGA*
Ga0137365_103270311	3300012201	Vadose Zone Soil	NVISGRQIEVVGGTNDLRALHLKCSTPGCFSTPADWILPVKSDTVREIDILFSDDGA*
Ga0137399_104461252	3300012203	Vadose Zone Soil	VVGGTNGLRALHLKCSTPGCLSTPAEWILPVKSDTVPEIDFLFRDNGA*
Ga0137399_113379701	3300012203	Vadose Zone Soil	QIEVVGGTNGLRALHLKCSTPGCFSTPADWILPLKSETVREMDFLFRDNGF*
Ga0137381_107375222	3300012207	Vadose Zone Soil	DKNRAWNSLDYQLYCTGCKTVISGRQIEVVGGTNGLRALHLKCSTPGCLSTPADWILPVKSETVREIDFLFRDNGA*
Ga0137376_103446353	3300012208	Vadose Zone Soil	LISGRQIEVVGGTNGLRALHLKCSTPGCLSTPADWIVPVKSDTWGEIDFFFRDNGA*
Ga0137376_114046821	3300012208	Vadose Zone Soil	NGLRALHLKCSTPGCLSTPADWIVPVKADTCGEIDFLFRDNGA*
Ga0137378_116167161	3300012210	Vadose Zone Soil	IEVVGGTNALRALHIKCSTPGCLSTPADWLLPVKSDAVCEIDILFRDNGA*
Ga0137386_107815222	3300012351	Vadose Zone Soil	VGGTNGLRALHLKCSTPGCLSAPADWIVPVEPETVREIDFLFRDNGA*
Ga0137360_111792692	3300012361	Vadose Zone Soil	VVGGTNGLRALHLKCSTPGCLSAPADWIVPVKPETVREIDFLFRDNGA*
Ga0137358_105417912	3300012582	Vadose Zone Soil	RQIEVVGGTNGLRALHLKCSTPGCLSTPADWIVPVKSDTWGEIDFFFRDNGA*
Ga0137397_107105542	3300012685	Vadose Zone Soil	WNSLDDQLYCTGCKTVISGRRIEVVGGTNGLRALHLKCSTPGCLSTPADWILPVKSDTVREIDFLFRDSGF*
Ga0137396_107489561	3300012918	Vadose Zone Soil	NGLRALHLKCSTPGCLSAPVDWLLPVKSETVCEIDILFRDNGA*
Ga0137407_118843191	3300012930	Vadose Zone Soil	GTNGLRALHLKCSTPGCLSAPADWIVPVKPETVREIDFLFRDNGA*
Ga0164298_100362731	3300012955	Soil	EVVGGTNGLRALHLKCSTPGCFSTPADWILPVKSDTVREIDIRFRDNGA*
Ga0134087_101909872	3300012977	Grasslands Soil	GGTNGLRALHLKCSTPGCFSTPADWILPVKSDTVREIDMLFRDNGA*
Ga0164308_117877421	3300012985	Soil	ALRRLDRSRAWNSLDDQLYCTICKSVTSGRQIEVVGGTNGLRALHLKCSTPGCFSTPADWILPVKSDTVREIDIRFRDTDA*
Ga0164305_101458351	3300012989	Soil	LYCTICKSVISGRRIEVVGGTNGLRALHLKCSTPGCLSTPADWLLPVKSDTVREIDFLFRDNGF*
Ga0164305_116183111	3300012989	Soil	ISGRQIEVVGGTNGLRALHIKCSTPGCVSTPADWLLPVKSDTVREIDFLFRDDGF*
Ga0157378_107186231	3300013297	Miscanthus Rhizosphere	QLYCTVCKTVISGRQIEVVGGTNGLRALRLKCSTPGCLSTPADWILPVKSDTVLEMDFLFRDNGF*
Ga0163162_125044081	3300013306	Switchgrass Rhizosphere	RRLDKGRAWNSLDDQLYCTICKKVISGRQIEVVSGTNGLRALRLKCSTTGCFSTPADWTSPVKSDTVRDIDILFLDNGA*
Ga0134081_103252482	3300014150	Grasslands Soil	KIEVVGGTNGLRALHIKCSTPGCFSTPADWIVSVKSDTVREIDFLFRDNGA*
Ga0134079_106809622	3300014166	Grasslands Soil	GRQIEVVGGTNGLRALHLKCSTPGCFSTPADWLLPVKSDTVCEIDIVFRDNGV*
Ga0134079_106940581	3300014166	Grasslands Soil	IEVVGGTTGLRALHLKCSTPGCLSTTADWILPVKSETVREIDFLFRDDGA*
Ga0137412_102884731	3300015242	Vadose Zone Soil	LYCTICKTVISGRQIEVVGGTNGLRALHLKCSTPGCFSTPADWVLPVKSDTVREIDILFRDNGA*
Ga0137403_100470211	3300015264	Vadose Zone Soil	SVISGRQIEVVGGTNGLRALHIKCSTPGCVSTPADWILPVKSETVREIDILFRDNGV*
Ga0137403_109109742	3300015264	Vadose Zone Soil	SSLDDQLYCTICKRVISGRQIEVVGGTNGLRALHLKCSTPDCLSTPADWILPVKSDTVREIDIFFRDNGA*
Ga0134072_100215531	3300015357	Grasslands Soil	LYCTICKSVISGRQIEVVGGTNGLRALHLKCATPDCLSTPADWILPVKSDTVREIDIRFRENSA*
Ga0134072_103151251	3300015357	Grasslands Soil	GGTNGLRALHLKCSTPGCLSTPADWILPVKSVTVREIDFLFRDNGA*
Ga0132256_1030395762	3300015372	Arabidopsis Rhizosphere	GRKIEVVGGANGLRAIRLKCSTPGCPSTPDDWTLPVKSDTVREIDILFRDNGA*
Ga0132257_1039110411	3300015373	Arabidopsis Rhizosphere	GRQIAVVGGTNGLRALHIKCSTPGCFATPADWILPVKSETVREIDFLFRDNGF*
Ga0163161_100772665	3300017792	Switchgrass Rhizosphere	WNSLDDQLYCTICKTVISGRQIEVVGGTNGLRALHLKCSTPGCFSTPADWILPVKSDTVREIDSLFRDNGA
Ga0184605_103784312	3300018027	Groundwater Sediment	LRALHLKCSTPGCFSTPADWLLPVKSDTVREIDFLFRDNGA
Ga0184620_101967911	3300018051	Groundwater Sediment	TVISGRQIEVVGGTNGLRALHLKCSTPGCFSTPADWILPVKSDTVREIDILFRDNSA
Ga0066667_121930582	3300018433	Grasslands Soil	CLDDRLYCTVCKHEISGRQIEVVGGTNGLRALHLKCSTPGYLSTLADWILPAKLDTAREIDILFRDNGA
Ga0066662_105312791	3300018468	Grasslands Soil	EISGRQIEVVGGTNGLRALHLKCSTAGCLSTPDDWILPVKLDTVREVDILFRDNGA
Ga0066669_102770673	3300018482	Grasslands Soil	SGRQIEVVGGTNGLRALHLKCSTPGCLSTPADWIVPVRSDTGGEIDFFFRDNGA
Ga0066669_103043273	3300018482	Grasslands Soil	DKGRSWSSLDDQLYCTICKRVISGRHIEVVGGTNGLRALHLKCSTADCLSTPADWILPVKSDTVREIDILSR
Ga0193723_11598212	3300019879	Soil	GGTNGLRALHLKFSTPGCLSTPADWLLPVKSHTVCEIDIVFRDNGV
Ga0193707_11452081	3300019881	Soil	LAALRRLDKSRAWNSLDDQLYCTGCKTVISGRQIEVVGGTNGLRALHLKCSTPGCLSTPADWILPVKSETVREIDFLFRDNGA
Ga0193709_10104121	3300021411	Soil	LRALHLKCSTPGCLSTPADWIMPVKSDTVREIDFLFRDDGF
Ga0193750_10544181	3300021413	Soil	LKCSTPGCLSTPADWIVPVKPETVREIEFLFRDNGA
Ga0222622_109166841	3300022756	Groundwater Sediment	IEVVGGTNGLRALHLKCSTPGCCSTPADWILPVKSDTVPEIDMLFRDDGV
Ga0207692_101469341	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	GGANRLRAMRLKCSTPGCFSTPADWTLPVKSDSVRQIDFFFRDEDF
Ga0207699_110902711	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	DDQLYCTVCKTVISGRQIEVVGGTNGLRALRLKYSTPGCLSTPADWILPVKSDTVLEMDFLFRDNGF
Ga0207700_113290572	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LDDQLYCTVCKTVISGRQIEVVGGTNGLRALHLKCSTPGCFSTPADWLVPVKSDTVPEIDILFRDNGA
Ga0207664_111199032	3300025929	Agricultural Soil	WNSLDDQLYCTVCKTVISGRQIEVVGGTNGLRALRLKCSTPGCLSTPADWILPVKSDTVLEMDFLFRDNGF
Ga0207664_112270121	3300025929	Agricultural Soil	EVVGGTNGLRALHLKCSTPGCLSTPADWILPVKSETVREIDFLFRDDGA
Ga0207706_112110121	3300025933	Corn Rhizosphere	CTICKNVISGSQIEVVGGTNGLRALRLKCSTPGCFATPADWILPVKSETVREIDFLFRDNGF
Ga0207669_110398831	3300025937	Miscanthus Rhizosphere	AALRRLDESRAWNTLDDQLYCTGCKSIISGRQIKVVGGTNGLRALHLKCSTPGCFSTPADWILPVKSDTVREIDIRFRDNGA
Ga0207651_100621071	3300025960	Switchgrass Rhizosphere	DDQLYCTVCKNVISGRQIAVVGGTNGLRALHIKCSTPGCFATPADWILPVKSETVREIDFLFRDNGF
Ga0207677_115169862	3300026023	Miscanthus Rhizosphere	LRRLDKSRAWNSLDDQLYCTLCKNVISGRQIEVVGGTNGLRALHLKCSTPGCFSTPADWILPVKSDTVREIDIRFRDNGA
Ga0207648_103564921	3300026089	Miscanthus Rhizosphere	GGTNGLRALHLKCSTPGCFATPADWLLPVKSDTVPEIDFLFRDNGA
Ga0207698_105875192	3300026142	Corn Rhizosphere	LRRLDKSRAWNSLDDQLYCTLCKNVISGRQIEVVGGTNGLRALHLKCSTPGCFSTPADWILPVKSDTVREIDIRFRETGA
Ga0209688_11004282	3300026305	Soil	NSLDDQLYCTGCKTVISGRQIEVVGGTNGLRALHLKCSTPGCFSTPADWILPVKSDTVREIDIFFRDNGV
Ga0209265_10557913	3300026308	Soil	DKLVALRRIDKGRQWSSLDDQVYCTICKSVISGRQIEVVGGTNGLRALHLKCSTPGCFSTPADWILPVKSDTVRGIDIFFRDNGV
Ga0209806_12029991	3300026529	Soil	LRRLDKSRAWNSLDDQLYCTGCKTVISGRQIEVVGGTNGLRALHLKCSTPGCLSTPADWILPVKSETVREIDFLFRDNGA
Ga0209807_11283464	3300026530	Soil	QIEVVGGTNGLRALHLKCSTPGCFSTPADWILPVKSDTVREIDIFFRDNGV
Ga0209056_101406284	3300026538	Soil	DKLAALRRIDKGRPWNSLDNRVYCTICKSVISGRQIEVVGGTNGLRALHLKCSTADCLSTPADWILPVKSDTVREIDILFRDNGA
Ga0209376_12235081	3300026540	Soil	KVISGRQIEVVGGTNGLRALHLKCSTPGCFSTPADWILPVKSDTVREIDIFFRDNGV
Ga0209474_107518441	3300026550	Soil	SGRQIEVVGGTNGLRALHLKCSTPGCPSTPADWILPVKSDIVREIDILFRDNGA
Ga0209577_101640444	3300026552	Soil	ISGRQIEVVGGTNGLRALHLKCSTAGCLSTPADWILPDKLDTVREIDILFRDNGA
Ga0179593_11711575	3300026555	Vadose Zone Soil	LFPESHEISGRQIEVVGGTNGLRALHLKCSTPDCPSMPADWVLPVKSNTVREIDILFRDNGA
Ga0209325_10461901	3300027050	Forest Soil	TGCKTVISGRQIEVVGGTNGLRALHLKCSTPGCLSTPADWILPAKPETVREIDFLFRDNG
Ga0137415_100477464	3300028536	Vadose Zone Soil	QLYCTGCKTVISGRQIEVVGGTNGLRALHLKCSTPGCLSTPADWILPVKSETVREIDFLFRDNGA
Ga0307296_107732941	3300028819	Soil	LYCTICKNVNSGRQIEVVGGTNGLRALRLKCSTPGCFSTPADWILSVKSDNVREIEILFRDGGV
Ga0307469_100465943	3300031720	Hardwood Forest Soil	LAALRRLDKSRAWNSLDDQLYCTVCKNVISGRQIAVVGGTNGLRALHLKCSTPGCFATPADWLLPVKSDTVPEIDFLFRDNGA
Ga0307477_102554991	3300031753	Hardwood Forest Soil	KSVISGRQIELVGGTNGLRALHLKCSTPGCLSTPTDWILPVKSDTVREIDILFRDNGA
Ga0307479_115043141	3300031962	Hardwood Forest Soil	SRAWNSLDDQLYCTICKSVISGRQIELVGGTNGLRALHLKCSTPGCLSTPTDWILPVKSDTVREIDILFRDNGA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F052228

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences