Metagenome / Metatranscriptome Family F052216

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052216
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	64 residues
Representative Sequence	MAADTPQDMSLEQQKLVRTLVKALDAIAARLRRVPLDDEKQACRELTDILHAVRAIANAVTP
Number of Associated Samples	101
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	65.73 %
% of genes near scaffold ends (potentially truncated)	21.68 %
% of genes from short scaffolds (< 2000 bps)	90.91 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.846 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.573 % of family members)
Environment Ontology (ENVO)	Unclassified (39.161 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (35.664 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 70.97% β-sheet: 0.00% Coil/Unstructured: 29.03%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF04519	Bactofilin	4.20
PF04773	FecR	1.40
PF04392	ABC_sub_bind	0.70
PF02566	OsmC	0.70
PF00982	Glyco_transf_20	0.70
PF12071	DUF3551	0.70
PF04828	GFA	0.70
PF09994	DUF2235	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	4.20
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	0.70
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.70
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.70
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.70
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.85 %
All Organisms	root	All Organisms	46.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.85 %
cellular organisms	root	All Organisms → cellular organisms	46.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.85 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	45.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.85 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.50 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.85 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.50 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.85 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.70 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.85 %
Bradyrhizobium sp. Tv2a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	0.70 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003505\|JGIcombinedJ51221_10041358	Not Available	1720	Open in IMG/M
3300005332\|Ga0066388_100090561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3479	Open in IMG/M
3300005332\|Ga0066388_100669995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1649	Open in IMG/M
3300005332\|Ga0066388_102506984	Not Available	937	Open in IMG/M
3300005332\|Ga0066388_104746583	Not Available	691	Open in IMG/M
3300005435\|Ga0070714_101632203	Not Available	630	Open in IMG/M
3300005436\|Ga0070713_100117244	All Organisms → cellular organisms → Bacteria → Proteobacteria	2329	Open in IMG/M
3300005439\|Ga0070711_100550871	All Organisms → cellular organisms → Bacteria → Proteobacteria	957	Open in IMG/M
3300005439\|Ga0070711_100555409	Not Available	953	Open in IMG/M
3300005467\|Ga0070706_101952673	Not Available	532	Open in IMG/M
3300005554\|Ga0066661_10108852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1665	Open in IMG/M
3300005764\|Ga0066903_105432412	All Organisms → cellular organisms → Bacteria → Proteobacteria	672	Open in IMG/M
3300005764\|Ga0066903_107323662	Not Available	570	Open in IMG/M
3300006028\|Ga0070717_11298536	Not Available	662	Open in IMG/M
3300006041\|Ga0075023_100338098	Not Available	632	Open in IMG/M
3300006050\|Ga0075028_100746158	Not Available	593	Open in IMG/M
3300006052\|Ga0075029_100693465	Not Available	686	Open in IMG/M
3300006057\|Ga0075026_100061992	All Organisms → cellular organisms → Bacteria → Proteobacteria	1786	Open in IMG/M
3300006057\|Ga0075026_100349447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	819	Open in IMG/M
3300006057\|Ga0075026_100360129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	808	Open in IMG/M
3300006057\|Ga0075026_100969831	Not Available	527	Open in IMG/M
3300006057\|Ga0075026_101001926	Not Available	519	Open in IMG/M
3300006086\|Ga0075019_10855255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	582	Open in IMG/M
3300006102\|Ga0075015_100958561	Not Available	521	Open in IMG/M
3300006163\|Ga0070715_10866999	Not Available	553	Open in IMG/M
3300006172\|Ga0075018_10095529	Not Available	1311	Open in IMG/M
3300006174\|Ga0075014_100444210	Not Available	716	Open in IMG/M
3300006175\|Ga0070712_100080666	All Organisms → cellular organisms → Bacteria → Proteobacteria	2355	Open in IMG/M
3300006175\|Ga0070712_100447690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1075	Open in IMG/M
3300006903\|Ga0075426_10756559	All Organisms → cellular organisms → Bacteria → Proteobacteria	730	Open in IMG/M
3300009038\|Ga0099829_10942151	Not Available	716	Open in IMG/M
3300010048\|Ga0126373_10854346	All Organisms → cellular organisms → Bacteria → Proteobacteria	973	Open in IMG/M
3300010048\|Ga0126373_11692916	Not Available	697	Open in IMG/M
3300010048\|Ga0126373_12322402	Not Available	597	Open in IMG/M
3300010358\|Ga0126370_11909780	Not Available	578	Open in IMG/M
3300010376\|Ga0126381_100449069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1807	Open in IMG/M
3300010376\|Ga0126381_101823161	All Organisms → cellular organisms → Bacteria → Proteobacteria	878	Open in IMG/M
3300010376\|Ga0126381_103553718	Not Available	612	Open in IMG/M
3300012199\|Ga0137383_11203815	Not Available	544	Open in IMG/M
3300012206\|Ga0137380_10213095	Not Available	1749	Open in IMG/M
3300012206\|Ga0137380_10510187	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300012208\|Ga0137376_10905408	Not Available	757	Open in IMG/M
3300012209\|Ga0137379_10074117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3272	Open in IMG/M
3300012211\|Ga0137377_11635574	Not Available	567	Open in IMG/M
3300012349\|Ga0137387_10197541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1444	Open in IMG/M
3300012351\|Ga0137386_10108156	All Organisms → cellular organisms → Bacteria → Proteobacteria	1970	Open in IMG/M
3300012359\|Ga0137385_10522374	Not Available	1003	Open in IMG/M
3300012971\|Ga0126369_10139472	All Organisms → cellular organisms → Bacteria → Proteobacteria	2263	Open in IMG/M
3300015373\|Ga0132257_103393288	Not Available	580	Open in IMG/M
3300016319\|Ga0182033_10324723	Not Available	1278	Open in IMG/M
3300016341\|Ga0182035_11013104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	736	Open in IMG/M
3300016371\|Ga0182034_10454279	All Organisms → cellular organisms → Bacteria → Proteobacteria	1061	Open in IMG/M
3300016371\|Ga0182034_10711295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	855	Open in IMG/M
3300016371\|Ga0182034_11404952	Not Available	610	Open in IMG/M
3300016404\|Ga0182037_10058741	All Organisms → cellular organisms → Bacteria → Proteobacteria	2608	Open in IMG/M
3300016404\|Ga0182037_11481607	Not Available	601	Open in IMG/M
3300016422\|Ga0182039_11953570	Not Available	539	Open in IMG/M
3300016445\|Ga0182038_10386039	All Organisms → cellular organisms → Bacteria → Proteobacteria	1170	Open in IMG/M
3300017822\|Ga0187802_10000225	All Organisms → cellular organisms → Bacteria → Proteobacteria	13123	Open in IMG/M
3300017822\|Ga0187802_10046539	All Organisms → cellular organisms → Bacteria → Proteobacteria	1578	Open in IMG/M
3300017823\|Ga0187818_10118570	All Organisms → cellular organisms → Bacteria → Proteobacteria	1147	Open in IMG/M
3300017993\|Ga0187823_10183509	Not Available	678	Open in IMG/M
3300017994\|Ga0187822_10056467	All Organisms → cellular organisms → Bacteria → Proteobacteria	1115	Open in IMG/M
3300018433\|Ga0066667_10102473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1909	Open in IMG/M
3300020581\|Ga0210399_10335660	All Organisms → cellular organisms → Bacteria → Proteobacteria	1262	Open in IMG/M
3300021405\|Ga0210387_11688275	Not Available	537	Open in IMG/M
3300021560\|Ga0126371_10561540	All Organisms → cellular organisms → Bacteria → Proteobacteria	1290	Open in IMG/M
3300025905\|Ga0207685_10286265	All Organisms → cellular organisms → Bacteria → Proteobacteria	810	Open in IMG/M
3300026872\|Ga0207785_1023086	Not Available	543	Open in IMG/M
3300026942\|Ga0207783_1021888	Not Available	631	Open in IMG/M
3300026981\|Ga0207822_1021842	Not Available	694	Open in IMG/M
3300026997\|Ga0207784_1008317	Not Available	1157	Open in IMG/M
3300027070\|Ga0208365_1007542	Not Available	1322	Open in IMG/M
3300027605\|Ga0209329_1000391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5043	Open in IMG/M
3300027680\|Ga0207826_1057213	All Organisms → cellular organisms → Bacteria → Proteobacteria	1078	Open in IMG/M
3300027824\|Ga0209040_10137268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1336	Open in IMG/M
3300027910\|Ga0209583_10018162	All Organisms → cellular organisms → Bacteria → Proteobacteria	2188	Open in IMG/M
3300027911\|Ga0209698_10203180	All Organisms → cellular organisms → Bacteria → Proteobacteria	1602	Open in IMG/M
3300027915\|Ga0209069_10210178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	996	Open in IMG/M
3300027915\|Ga0209069_10840799	Not Available	551	Open in IMG/M
3300030847\|Ga0075405_11886469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	801	Open in IMG/M
3300030916\|Ga0075386_12002179	All Organisms → cellular organisms → Bacteria → Proteobacteria	1080	Open in IMG/M
3300030945\|Ga0075373_11640618	All Organisms → cellular organisms → Bacteria → Proteobacteria	940	Open in IMG/M
3300031057\|Ga0170834_103688918	All Organisms → cellular organisms → Bacteria → Proteobacteria	988	Open in IMG/M
3300031057\|Ga0170834_106761476	Not Available	1061	Open in IMG/M
3300031128\|Ga0170823_12304870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	767	Open in IMG/M
3300031231\|Ga0170824_106390802	All Organisms → cellular organisms → Bacteria → Proteobacteria	910	Open in IMG/M
3300031231\|Ga0170824_108434015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	1535	Open in IMG/M
3300031231\|Ga0170824_126776919	Not Available	538	Open in IMG/M
3300031446\|Ga0170820_13059507	Not Available	1618	Open in IMG/M
3300031446\|Ga0170820_16894631	Not Available	849	Open in IMG/M
3300031546\|Ga0318538_10802567	Not Available	511	Open in IMG/M
3300031573\|Ga0310915_10125630	All Organisms → cellular organisms → Bacteria → Proteobacteria	1755	Open in IMG/M
3300031573\|Ga0310915_10735759	Not Available	695	Open in IMG/M
3300031573\|Ga0310915_11280614	Not Available	505	Open in IMG/M
3300031668\|Ga0318542_10522925	Not Available	617	Open in IMG/M
3300031679\|Ga0318561_10290254	All Organisms → cellular organisms → Bacteria → Proteobacteria	894	Open in IMG/M
3300031679\|Ga0318561_10561488	Not Available	629	Open in IMG/M
3300031681\|Ga0318572_10711872	Not Available	598	Open in IMG/M
3300031682\|Ga0318560_10144977	All Organisms → cellular organisms → Bacteria → Proteobacteria	1255	Open in IMG/M
3300031713\|Ga0318496_10841526	Not Available	505	Open in IMG/M
3300031719\|Ga0306917_10224507	All Organisms → cellular organisms → Bacteria → Proteobacteria	1431	Open in IMG/M
3300031719\|Ga0306917_10353625	Not Available	1142	Open in IMG/M
3300031724\|Ga0318500_10573175	Not Available	571	Open in IMG/M
3300031744\|Ga0306918_10035381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3198	Open in IMG/M
3300031747\|Ga0318502_10435321	All Organisms → cellular organisms → Bacteria → Proteobacteria	782	Open in IMG/M
3300031747\|Ga0318502_10868549	Not Available	548	Open in IMG/M
3300031751\|Ga0318494_10564684	Not Available	665	Open in IMG/M
3300031754\|Ga0307475_10649730	All Organisms → cellular organisms → Bacteria → Proteobacteria	843	Open in IMG/M
3300031771\|Ga0318546_10675040	All Organisms → cellular organisms → Bacteria → Proteobacteria	727	Open in IMG/M
3300031796\|Ga0318576_10613913	Not Available	512	Open in IMG/M
3300031819\|Ga0318568_10259080	All Organisms → cellular organisms → Bacteria → Proteobacteria	1078	Open in IMG/M
3300031823\|Ga0307478_10462151	Not Available	1056	Open in IMG/M
3300031879\|Ga0306919_10772279	Not Available	739	Open in IMG/M
3300031879\|Ga0306919_10851692	Not Available	700	Open in IMG/M
3300031890\|Ga0306925_10917391	Not Available	899	Open in IMG/M
3300031896\|Ga0318551_10337992	Not Available	851	Open in IMG/M
3300031910\|Ga0306923_12340658	Not Available	531	Open in IMG/M
3300031912\|Ga0306921_10819049	Not Available	1062	Open in IMG/M
3300031941\|Ga0310912_10925252	All Organisms → cellular organisms → Bacteria → Proteobacteria	670	Open in IMG/M
3300031941\|Ga0310912_10988665	Not Available	645	Open in IMG/M
3300031945\|Ga0310913_10603668	Not Available	778	Open in IMG/M
3300031946\|Ga0310910_11247572	Not Available	575	Open in IMG/M
3300031947\|Ga0310909_10147582	Not Available	1932	Open in IMG/M
3300031947\|Ga0310909_10426477	All Organisms → cellular organisms → Bacteria → Proteobacteria	1113	Open in IMG/M
3300031954\|Ga0306926_10633043	Not Available	1303	Open in IMG/M
3300031954\|Ga0306926_10737124	All Organisms → cellular organisms → Bacteria → Proteobacteria	1192	Open in IMG/M
3300031954\|Ga0306926_11750848	All Organisms → cellular organisms → Bacteria → Proteobacteria	707	Open in IMG/M
3300031962\|Ga0307479_11234949	Not Available	710	Open in IMG/M
3300031962\|Ga0307479_11408182	Not Available	656	Open in IMG/M
3300031962\|Ga0307479_11581892	Not Available	611	Open in IMG/M
3300032035\|Ga0310911_10243867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1028	Open in IMG/M
3300032035\|Ga0310911_10414680	Not Available	779	Open in IMG/M
3300032055\|Ga0318575_10278311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	846	Open in IMG/M
3300032059\|Ga0318533_10163913	All Organisms → cellular organisms → Bacteria → Proteobacteria	1579	Open in IMG/M
3300032059\|Ga0318533_10862015	Not Available	664	Open in IMG/M
3300032261\|Ga0306920_100232210	All Organisms → cellular organisms → Bacteria → Proteobacteria	2752	Open in IMG/M
3300032261\|Ga0306920_100975344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1235	Open in IMG/M
3300032261\|Ga0306920_102156702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	776	Open in IMG/M
3300033289\|Ga0310914_10090959	Not Available	2606	Open in IMG/M
3300033289\|Ga0310914_10136550	Not Available	2150	Open in IMG/M
3300033289\|Ga0310914_11442116	Not Available	591	Open in IMG/M
3300033290\|Ga0318519_10171955	Not Available	1223	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.60%
Host-Associated	Host-Associated	1.40%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.22%
Aquatic	Environmental → Aquatic	15.38%
Plants	Host-Associated → Plants	1.40%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.22%
Sediment	Environmental → Aquatic → Sediment	11.19%
Freshwater	Environmental → Aquatic → Freshwater	4.20%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.43%
Loam	Environmental → Terrestrial → Soil → Loam	16.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	11.19%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	51.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	11.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.99%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.40%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.08%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	11.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.29%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.99%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.59%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.10%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026872	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 74 (SPAdes)	Environmental	Open in IMG/M
3300026942	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 63 (SPAdes)	Environmental	Open in IMG/M
3300026981	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 67 (SPAdes)	Environmental	Open in IMG/M
3300026997	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 66 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300030847	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030945	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ51221_100413581	3300003505	Forest Soil	MAADTPQDMSSEQQKLVRALVKALDPIAARLKRVPLDDEKQACRELTEILDAVRATANAVTPELEAKA*
Ga0066388_1000905615	3300005332	Tropical Forest Soil	MAADTLQDMSLEQQKLVRTLVKALDAIAARLRRVPLDDEKQACCELTDILHAVRAIANAVTL*
Ga0066388_1006699951	3300005332	Tropical Forest Soil	MAADTPRDMSLEQQKSVRALVKALGAIAAPLRRVPLDDEKQACRELTDVLHAVRAIANAVTP*
Ga0066388_1025069841	3300005332	Tropical Forest Soil	MAAITPQDMSLEQQKSVGALVKALGAIAARLRRVPLDDEKQACRELTEILHAVRAIANAVTP*
Ga0066388_1047465831	3300005332	Tropical Forest Soil	MAADASQGMSFEQQKSVEALVKALYAIAAALRRVALDDEKQACSKLTDILHAVRAIANPMQ*
Ga0070714_1016322032	3300005435	Agricultural Soil	GDMAADTPQDMSLEQQKLVRTLVKALDAIAARLRRVPLDDEKQACRELTDILHTVRAIANAVTP*
Ga0070713_1001172441	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAADTPQDMSLEQQKLVRTLVKALDAIAARLRRVPLDDEKQACRELTDILHAVRAIANAVTP*
Ga0070711_1005508712	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MAADTPQDMSLEQQKLVRALVKALDAVAARLRRVPLDDEKQACRELTDILHAVRAIANAVTP*
Ga0070711_1005554091	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	SLEQQKLVRALVKALDPIAARLRRVPLDDEKKACRELTEILDAVRAIANAVKPQLEAKA*
Ga0070706_1019526731	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAADTPQDMSLQQQKLVRALVKALDAIAARLSRVPLDDEKQACCELTDILDAVPAIANAVTP*
Ga0066661_101088522	3300005554	Soil	MAADTPQDMSLEQQKLVRALVKALDPIAARLKRVPLDDEKKACRELTEILDEVRAIANAVTPELEAKA*
Ga0066903_1054324122	3300005764	Tropical Forest Soil	MAADASQDMSFEQQKSVRALVKALYAIAAPLRRVALDEKKQACSKLTDILHAVRAIANPMQ*
Ga0066903_1073236621	3300005764	Tropical Forest Soil	MAADASQGMSFEQQKSVKALVKALYAIAAALRRVALDDEKQACSKLTDILHAVRAIANPMQ*
Ga0070717_112985362	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAADTPQDMSLEQQKLVRALVKALDPIAARLRRVPLDDEKQACRELTEILDAVRAIANAVTPELEAKA*
Ga0075023_1003380981	3300006041	Watersheds	HIREGDMAADTPQDMSSEQQKLVRALVKALDPIAARLRRVPLDDEKQACRELTEILDAVRAIANGVTPELEAKA*
Ga0075028_1007461581	3300006050	Watersheds	QKLVRALVKALDPIAARLRRVPLDDEKKACRELTEILDAVRAIANAVTPQLEAKA*
Ga0075029_1006934651	3300006052	Watersheds	MATPQDMSLEQQKLVRALVRALDPIAARLRRVPLDDEKQACRELTEILDAVRAIANAVTPELEAKA*
Ga0075026_1000619923	3300006057	Watersheds	MAADTPQDMSLEQQKLVRTLVKALDAIAARLRRVPLDDEKQACRELTDILHAVLLRPRVEKAK*
Ga0075026_1003494471	3300006057	Watersheds	MAADTPQDMSLEQQKLVRALVKALDPIAARLRRVPLDDEKQACRELREILDAVRAIANAVTP*
Ga0075026_1003601292	3300006057	Watersheds	MAADTPQDMSSEQQKLVRALVKALDPIAARLKRVPLDDEKQACRELTEILDAVRAIANAVTPELEAKA*
Ga0075026_1009698311	3300006057	Watersheds	MAADAPEDMSLEQQKLVRALVKALDAIAARLRRVPLDDEKQACRELTDILHAVRAIANAVTP*
Ga0075026_1010019262	3300006057	Watersheds	MAIKESHIREGDIAADTPQDMSLEQQKLVRALVKALDPIAARLRRVPLDDEKQACRELTEILDAVRAIANAVTPEAKA*
Ga0075019_108552552	3300006086	Watersheds	MAADTSQDMSLEQQKLVRTLVKALDAIAARLRRVPLDDEKQACRELTDILHAVRAIANAVTP*
Ga0075015_1009585611	3300006102	Watersheds	IRQGDMAADTPQDMSLEQQKLVRALVKALDPIAARLRRVPLDNEKQACRELTEILDAVRAIANAVTPELEAKA*
Ga0070715_108669991	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MAADTPQDMSLEQQKLVRALVKALDPIAARLRRVPLDDEKQACRELTEILDAVRAIAKAVTPELEAKA*
Ga0075018_100955292	3300006172	Watersheds	MAADTPQDMSLEQQKLVRALVKALDAVAARLRRVPLDDEKQACRELTDILRAVRAIANAVTP*
Ga0075014_1004442101	3300006174	Watersheds	GDMAADTPQDMSLEQQKLVRALVKALDAVAARLRRVPLDDEKQAFRELTDILHAVRAIANAVTP*
Ga0070712_1000806662	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MAADTPQDMSLEQQKLVRALVKALDPIAARLRRVPLDDEKKACRELTEILDAVRAIANAVKPELEAKA*
Ga0070712_1004476902	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MAIKESHTRVGDMAADTPQDMSLEQQKLVRTLVKALDAIAARLRRVPLDDENEACRELTDIVNAVREIANAITPSQP*
Ga0075426_107565592	3300006903	Populus Rhizosphere	MAADTPQDMSLEQQKLVRTLVKALDAIAARLRRVPLDDEKQACRELTDILHAVRAIANAVAP*
Ga0099829_109421511	3300009038	Vadose Zone Soil	MAIKESHSREGDMAADTPQEVSSEQQKLVRALVKALDAIAARLRRVPLDDEKEACRELTDIVDAVRAIANAVTP*
Ga0126373_108543462	3300010048	Tropical Forest Soil	MAADASQDMSFEQQKSVRALVKALDAIAAPLRRVALDDEKQACSMLTDILYAVRAIANPMQ*
Ga0126373_116929163	3300010048	Tropical Forest Soil	ADASQDMSFEQQKSVRALVKALDAIAAPLRRVALDDEKQACSKLTDILHAVRAIANPMQ*
Ga0126373_123224021	3300010048	Tropical Forest Soil	MAIKESHTREGDMAADTPRDMSLEQQKSVRALVKALGAIAAPLRRVPLDDEKQACRELTDVLHAVRAIANAVTP*
Ga0126370_119097801	3300010358	Tropical Forest Soil	MAADASQDMSFEQQKSVRALVKALDAIAAPLRRVALDDEKQACSKLTDILHAVRAIANPMQ*
Ga0126381_1004490693	3300010376	Tropical Forest Soil	MAADALQDMSFEQQKSVRALVKALDAIAAPLRRVALDEKKQACSKLTDILHAVRAIANPMQ*
Ga0126381_1018231612	3300010376	Tropical Forest Soil	MSFEQQKLVRVLVKALDPIAARLRRVPLDDDKQACRELTDILDAVRAIANAVTP*
Ga0126381_1035537181	3300010376	Tropical Forest Soil	MAADTPRDMSAEQQKSVRALVKALGAIAAPLRRVPLDDEKQACRELTDVLHAVRAIANAVTP*
Ga0137383_112038151	3300012199	Vadose Zone Soil	MAIKQSHIREGDMAADTPQDMSLEQQKLVRALVKALDPIAARLRRVPLDDEKQACRELTEILDAVRAIANAVTP*
Ga0137380_102130953	3300012206	Vadose Zone Soil	MAIDESHTSEGDMAADTPQDMSSEQQKLVSALVKALDGIAARLRRVPLDDETEACRELTEIVDAVRTIANAVTP*
Ga0137380_105101871	3300012206	Vadose Zone Soil	MNTREGDMAADAPQDMSSEQQKLVRALVKALDAIAARLRRVPLDDEKEACRELTEIADAVRTIANAVTP*
Ga0137376_109054082	3300012208	Vadose Zone Soil	MAADTPQDMSLEQQKLVRALVKALDPIAARLRRVPLDDEKQACRELTEILDAVRAIANAVTPQLEAKA*
Ga0137379_100741178	3300012209	Vadose Zone Soil	MAIDESHTSEGDMAADTPQDMSSEQQKLVSALVKALDGIAARLRRVPLDDEKEACRELTEIVDAVRTIANAVTP*
Ga0137377_116355741	3300012211	Vadose Zone Soil	MAIKQSHIREGDMAADTPQDMSLEQQKLVRALVKALDPIAARLRRVPLDDEKQACRELTEILDAVR
Ga0137387_101975412	3300012349	Vadose Zone Soil	MAIDESHTSEGDMAADTPQDMSSEQQKLVRALVKALDPIAARLRRVPLDDEKEACRELTEIVDAVRTIANAVTP*
Ga0137386_101081561	3300012351	Vadose Zone Soil	MAIKESNIREGDMAADTPQDMSLEQQKLVRALVKALDPIAARLRRVPLDDEKQACRELTEILDAVRAIANAVTP*
Ga0137385_105223741	3300012359	Vadose Zone Soil	MAIKESHIREGDMAADTPQDMSLEQQKLVRALVKALDPIAARLRRVPLDDEKQACRELTEILDAVRAIANAVTP*
Ga0126369_101394722	3300012971	Tropical Forest Soil	MAADASQDMSFEQQKSVGALVKALGAIAARLRRVSLDDQKQACRELTEVLHAVRAIANPMQ*
Ga0132257_1033932881	3300015373	Arabidopsis Rhizosphere	MAIKESHTREGDMAADTPQDMSLEQQKLVRTLVKALDAIAARLRRVPLDDEKQACRELTDILHAVRAIANAVTP*
Ga0182033_103247233	3300016319	Soil	MEGDMAADTPQDMSLVQQKLVRTLVKALDAIAARLRRVPLDDKKQACRELTDILHAVRAIANAV
Ga0182035_110131042	3300016341	Soil	MAADTPQDMSLEQEKSVRALVKALGAIAAPLRRVPLDDEKQACRELTDILHAVRAIANAVTP
Ga0182034_104542792	3300016371	Soil	MSFEQQNLVRTLVKALDPIAARLRRVPLDVEKQACREFTDILDAVCAIANAVTP
Ga0182034_107112952	3300016371	Soil	MAIKESHTREGDMAADTPQDMSLEQQKLVRTLVKALDAIAARLRRVPLDDKKQACRELTDILHAVRAIANAV
Ga0182034_114049521	3300016371	Soil	MSLEQQKSVRALVKALGAIAAPLKRVPLDDEKQACRELTDILHAVRAIANAVTP
Ga0182037_100587412	3300016404	Soil	VAADTAQDMSLEQQKSVGALVKILGAIAERLRGVSLDDRKQACRELTEILHAVRAIANAVTP
Ga0182037_114816071	3300016404	Soil	MAADASQDMSLEQQKSVRALVKALDAIAAPLRRVALDDEKQACSKLTDILHAVRAIANPM
Ga0182039_119535701	3300016422	Soil	RDMSLEQQKSVRALVKALGAIAAPLRRVPLDDEKQACRELTDVLHAVRAIANAVTP
Ga0182038_103860392	3300016445	Soil	MAADPPQDMSLEQQKLVRTLVKALDAIATRLRRVPLDDKKQACRELTDILHAVRAIANAV
Ga0187802_1000022519	3300017822	Freshwater Sediment	MAADTPQDMSLEQQKLVRALVKALDAVAARLRRVPLDDEKQACRELTDILHAVRAIANAVTP
Ga0187802_100465392	3300017822	Freshwater Sediment	MAADIPRDMSLEQQKLVRTLVKALNAIAARLRRVPLDDEKQACRELTDILHAVRAIANAVTPEPEAKA
Ga0187818_101185702	3300017823	Freshwater Sediment	MAADTPQDMSLEQQKLVRALVKALDAVAARLRRVPLDDEKQACRELTDILHAVRAIANAVTPEPEAKA
Ga0187823_101835091	3300017993	Freshwater Sediment	MAADTPQDMSLEQQKLVRTLVKALDAIAAQLRRVPLDDEKQACRELTDILHAVRAIANAVTP
Ga0187822_100564673	3300017994	Freshwater Sediment	MAADTAQDMSLEQQKLVRALVKALDPIAARLRRVPLDDEKQACRELTKILDAVRAIANAVTPELEAKA
Ga0066667_101024731	3300018433	Grasslands Soil	MAADTPQDMSLEQQKLVRALVKALDPIAARLKRVPLDDEKKACRELTEILDEVRAIANAVTPELEAKA
Ga0210399_103356601	3300020581	Soil	MAADTPQDMSLEQQKLVRALVKALNAIAARLRRVPLDDEKQACRELTDILHAVRAIANAVTL
Ga0210387_116882751	3300021405	Soil	MAADTPQDMSSEQQKLVRALVKALDPIAARLKRVPLDDEKQACRELTEILDAVRATANAVTPELEAKA
Ga0126371_105615401	3300021560	Tropical Forest Soil	MAADASQDMSFEQQKSVRALVKALYAIAAPLRRVALDEKKQACSKLTDILHAVRAIANPM
Ga0207685_102862651	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MAADTPQDMSLEQQKLVRALVKALDPIAARLRRVPLDDEKQACRELTEILDAVRAIAKAVTPELEAKA
Ga0207785_10230862	3300026872	Tropical Forest Soil	MAADTPQDMSLVQQKLVRTLVKALDAIAARLRGVPFDDEKQACRELTDILHAVRAIANAV
Ga0207783_10218882	3300026942	Tropical Forest Soil	DMSLEQQKLVRTLVKALDAIAARLRGVPFDDEKQACRELTEILHAVRAIANAV
Ga0207822_10218421	3300026981	Tropical Forest Soil	MAADTPQDMSLEQQKLVRTLVKALDAIAARLRRVPFDDEKQACRELTEILHAVRAIANAV
Ga0207784_10083171	3300026997	Tropical Forest Soil	REGDMAADTPQDMSLVQQKLVRTLVKALDAIAARLRRVPLDDKKQACRELTDILHAVRAIANAV
Ga0208365_10075422	3300027070	Forest Soil	MAADTPQDMSLEQQKLVRTLVKALNAIAARLRRVPLDDEKQACRELTDILHAVRAIANAVTP
Ga0209329_10003913	3300027605	Forest Soil	MAADTLQDMSSEQQQLVRALVKALDPIAARLRRVPLDDEKQACRELTEILDAVRAIANAVTPELEAKA
Ga0207826_10572132	3300027680	Tropical Forest Soil	MAADTPQDMSLEQQKLVRTLVKALDAIAARLRGVPFDDEKQACRELTEILHAVRAIANAV
Ga0209040_101372683	3300027824	Bog Forest Soil	MAADTPQDMSLEQQRLVRALVKALDPIAARLRRVPLDDEKQACRELTEILDAVRAIANAVTPELEAKA
Ga0209583_100181624	3300027910	Watersheds	MAADTPQDMSSEQQKLVRALVKALDPIAARLRRVPLDDEKQACRELTEILDAVRAIANAVTPELEAKA
Ga0209698_102031802	3300027911	Watersheds	MAIKESHIREGDMATPQDMSLEQQKLVRALVRALDPIAARLRRVPLDDEKQACRELTEILDAVRAIANAVTPELEAKA
Ga0209069_102101781	3300027915	Watersheds	MAIKESHTREGDMAADTPQDMSLEQQKLVRTLVKALDAIAARLRRVPLDDEKQACRELTDILHAVRAIANAVTP
Ga0209069_108407992	3300027915	Watersheds	MAADTRQDMSSEQQKLVRALVKALDPIAARLRRVPLDDEKQACRELTEILDAVRAIANAVTPELEAKA
Ga0075405_118864692	3300030847	Soil	MAADTPQDMSLEQQKLVRALVKALDPIAARLRRVPLDDEKQACRELTEILDAVRAIANAVTPQLEAKA
Ga0075386_120021791	3300030916	Soil	MAADTPQDMSLEQQKLVRALVKALDPIAARLRRVPLDDEKKACRELTEILDAVRAIANAVTPQLEAKA
Ga0075373_116406182	3300030945	Soil	MAADTPQDMSLEQQKLVRALVKALDPIAARLRRVPLDDEKKACRELTEILDAVRAIANAVTPELEAKA
Ga0170834_1036889181	3300031057	Forest Soil	MAADTPEDLSLEQQKLVRALVKALDAIAARLRLVPLDDEKQTCRELTDILQAVRAIANAVTPELEAKA
Ga0170834_1067614762	3300031057	Forest Soil	MATDTPQDMSSEQQKLVRALVKALDAVVARLRRVPLDDEKEACRELTDIVSAVRAIANAVTP
Ga0170823_123048702	3300031128	Forest Soil	MAADTPQDMSSEQQQLVRALVKALDPIAARLRRVPLDDEKKACRELTEILDAVRAIANAVTPELEAKA
Ga0170824_1063908021	3300031231	Forest Soil	MAADIPQDMSSERQKLVRALVKALDPIAARLRRVPLDDEKQACRELTEILDAVRA
Ga0170824_1084340152	3300031231	Forest Soil	MVIEESHTREGGMATDTPQDMSSEQQKLVTALVKALDAIAARLRRVPLDDENEACRELTDIVSAVRAIANAVTP
Ga0170824_1267769191	3300031231	Forest Soil	SLEQQKLVRALVKALDPIAARLRRVPLDDEKKACRELTEILDAVRAIANAVTPQLEAKA
Ga0170820_130595072	3300031446	Forest Soil	MAADTPQDMSLEQQKLVRALVKALDPIAARLKRVPLDDEKKACRELTEILDAVRAIANAVTPELEAKA
Ga0170820_168946311	3300031446	Forest Soil	PQDMSLEQQKLVRALVKALDPIAARLRRVPLDDEKKACRELTEILDAVRAIANAVTPQLEAKA
Ga0318538_108025671	3300031546	Soil	MAADTPQDMSLEQQKLVRTLVKALEAIGARLRRVPLDDEKQACRELTDILYAVRAIANAVTP
Ga0310915_101256302	3300031573	Soil	MAADTPRDMSLEQQKSVRALVKALGAIAAPLRRVPLDDEKQACRELRDVLHAVRAIANAVTP
Ga0310915_107357592	3300031573	Soil	MAIKESHTREGDMAADTPQDMSLVQQKLVRTLVKALDAIAARLRRVPLDDKKQACRELTDILHAVRAIANAV
Ga0310915_112806142	3300031573	Soil	MATDTPRDVSLEQQKLVRTLLKALDAIGARLRRVPLDDEKQACRELTDILHAVRAIANAVTP
Ga0318542_105229251	3300031668	Soil	MAADTPQDMSLVQQKLVRTLVKALDAIAARLRRVPLDDKKQACRELTDILHAVRAIANAV
Ga0318561_102902541	3300031679	Soil	MAIKESHTREGDMAADTPQDMSLEQQKLVRTLVKALDAIAARLRRVPFDDEKQACRELTDILHAVRAIANAV
Ga0318561_105614881	3300031679	Soil	MAADTPQDMSLEQQKSVRALVKALGAIAAPLRRVPLDDEKQACRELTDILHAVRAIANAVTP
Ga0318572_107118721	3300031681	Soil	MAADTPQDMSLVQQKLVRTLVKALDAIAARLRRVPLDDKKQACRELTDILHAVRAIANAVTP
Ga0318560_101449772	3300031682	Soil	MAADPPQDMSLEQQKLVRTLVKALDAIAARLRRVPFDDEKQACRELTDILHAVRAIANAV
Ga0318496_108415262	3300031713	Soil	MAADTPQDMSLEQQKVVRTLVKALDAIAARLRRVPFDDEKQACRELTDILHAVRAIANAV
Ga0306917_102245071	3300031719	Soil	MAADTPRDMSLEQQKSVRALVKALGAIAAPLRRVPLDDEKQACRELRDVLHAVRAIANPVTP
Ga0306917_103536251	3300031719	Soil	AADTPQDMSLEQQKLVRTLVKALDAIAARLRRVPLDDKKQACRELTDILHAVRAIANAV
Ga0318500_105731752	3300031724	Soil	MAADTPQDMSLEQQKSVRALVKALGAIAAPLRRVPLDDEKQACRELTDILHAVRAIANAV
Ga0306918_100353814	3300031744	Soil	VAADTAQDMLLEQQKSVRALVKTLGAIAERLRGVSLDDRKQACRELTEILHAVRAIANAVTP
Ga0318502_104353211	3300031747	Soil	MAADTPQDMSLEQQKLVRTLVKALDAIAARLRRVPFDDEKQACRELTDILH
Ga0318502_108685492	3300031747	Soil	LEQQKLVRTLLKALDAIGALLRRVPLDDEKQACRELTDILHAVRAIANAV
Ga0318494_105646841	3300031751	Soil	MAADTPQDMSLEQQKLVRTLVKALDVIAARLRRVPLDDKKQACRELTDILHAVRAIANAV
Ga0307475_106497301	3300031754	Hardwood Forest Soil	MAATPEDMSIDQQKLVRTLVKALDAIAARLRRVPLDDEKQACRELTDILHTVRAIANAVT
Ga0318546_106750401	3300031771	Soil	VAADTAQDMSLEQQKSVRALVKTLGAIAERLRGVSLDDRKQACRELTEILHAVRAIANAVTP
Ga0318576_106139132	3300031796	Soil	PQDMSLEQQKLVRTLVKALDAIAARLRRVPFDDEKQACRELTDILHAVRAIANAV
Ga0318568_102590802	3300031819	Soil	MAADTPQDMSLVQQKLVRTLVKALDAIAARLRRVPFDDEKQACRELTDILHAVRAIANAV
Ga0307478_104621513	3300031823	Hardwood Forest Soil	MAADTPQDMSLEQQKLVRALVKALNAIAARLRRVPLDDEKQACRELTDILHAVRAIANAVTP
Ga0306919_107722792	3300031879	Soil	MAADTPQDMSLEQQKLVRTLVKALDAIGARLRRVPLDDEKQACRELTDILHAVRTIANAVTP
Ga0306919_108516921	3300031879	Soil	TPQDMSLVQQKLVRTLVKALDAIAARLRRVPLDDKKQACRELTDILHAVRAIANAV
Ga0306925_109173911	3300031890	Soil	TREGDMAADTPQDMSLVQQKLVRTLVKALDAIAARLRRVPLDDKKQACRELTDILHAVRAIANAV
Ga0318551_103379921	3300031896	Soil	MAADTPQDMSLEQQKVVRTLVKALDAIAARLRRVPLDDKKQACRELTDILHAVRAIANAV
Ga0306923_123406581	3300031910	Soil	MAIKESHTREGDMAADTPQDMSLEQQKLVRTLVKALDAIGARLRRVPLDDEKQACRELTDILHAVRAIANAV
Ga0306921_108190491	3300031912	Soil	WYKESHTREGDMATDTPRDVSLEQQKLVRTLLKALDAIGARLRRVPLDDEKQACRELTDILHAVRAIANAV
Ga0310912_109252522	3300031941	Soil	MAADTPQDMSLEQQKLVRTLVKALDAIAARLRRVPLDDKKQACRELTDILHAV
Ga0310912_109886652	3300031941	Soil	MAADTPQDMSLEQQKLVRTLVKALDAIGARLRRVPLDDEKQACRELTDILHAVRAIANAVTP
Ga0310913_106036681	3300031945	Soil	REGDMAADTPQDMSLEQQKLVRTLVKALEAIGARLRRVPLDDEKQACRELTDILYAVRAIANAVTP
Ga0310910_112475722	3300031946	Soil	MSLVQQKLVRTLVKALDAIAARLRRVPLDDKKQACRELTDILHAVRAIANAV
Ga0310909_101475825	3300031947	Soil	MAADTRQDMSLEQQKLVRTLVKVLDAIAARLRRVPLDDEKQACRELTEILHAVRAIANAVTP
Ga0310909_104264771	3300031947	Soil	MAADTPQDMSLEQQKVVRTLVKALDAIAARLRRVPLDDKKQACRELTDILHAVRAIA
Ga0306926_106330433	3300031954	Soil	TAQDMLLEQQKSVRALVKTLGAIAERLRGVSLDDRKQACRELTEILHAVRAIANAVTP
Ga0306926_107371243	3300031954	Soil	VAADTAQDMSLEQQKSVRALVKTLGAIAERLRGVSLDDRKQACRELTEILH
Ga0306926_117508482	3300031954	Soil	MSLEQQKSVRALVKALGAIAAPLRRVPLDDEKQACRELTDILHAVRAIANAVTP
Ga0307479_112349491	3300031962	Hardwood Forest Soil	MAADTPQDMSSEQQKLVRTLVKALDPIAARLKRVPLDDEKQACRELTEILDAVRATANAVTPELEAKGQPRQSSSD
Ga0307479_114081822	3300031962	Hardwood Forest Soil	MAATPEDMSIDQQKLVRTLVKALDAIAARLRRVPLDDEKQACRELTDILHAVRAIANQ
Ga0307479_115818921	3300031962	Hardwood Forest Soil	MAADTPQDMSLGQQKLVRALVTALDPIVERLRRVPLDDEKQACRELTEILDAVRAIGNAVTPELEAKA
Ga0310911_102438673	3300032035	Soil	NRINESYNTDGDVAADTAQDMSLEQQKSVRALVKTLGAIAERLRGVSLDDRKQACRELTEILHAVRAIANAVTP
Ga0310911_104146801	3300032035	Soil	ESHTMEGDMAADTPQDMSLVQQKLVRTLVKALDAIAARLRRVPLDDKKQACRELTDILHAVRAIANAV
Ga0318575_102783112	3300032055	Soil	MAADTPQDMSLEQQKLVRTLVKVLDAIAARLRRVPLDDKKQACRELTDILHAVRAIANAV
Ga0318533_101639132	3300032059	Soil	VAADTAQDMSLEQQKSVRALVKTLGAIAERLRGVSLDDRKQVCRELTEILHAVRAIANAVTP
Ga0318533_108620151	3300032059	Soil	PQDMSLVQQKLVRTLVKALDAIAARLRRVPLDDKKQACRELTDILHAVRAIANAV
Ga0306920_1002322104	3300032261	Soil	MAADTPRDMSLEQQKSVRALVKALGAIAAPLRRVPLDDEKQACRELTDVLHAVRAIANAVTP
Ga0306920_1009753442	3300032261	Soil	MAADTPQDMSLEQQKLVRTLVKALDAIGARLRRVPLDDEKQACRELTDILHAVRAIANAV
Ga0306920_1021567021	3300032261	Soil	MSLEQQKSVRALVKALGAIAAPLRRVPLDDEKQACHELTDILHAVRAIANAVTSPRWPQSGARGME
Ga0310914_100909591	3300033289	Soil	QDMSLVQQKLVRTLVKALDAIAARLRRVPLDDKKQACRELTDILHAVRAIANAV
Ga0310914_101365505	3300033289	Soil	DMATDTPRDVSLEQQKLVRTLLKALDAIGARLRRVPLDDEKQACRELTDILHAVRAIANAVTP
Ga0310914_114421162	3300033289	Soil	MSFEQQNLVRTLVKALDPIAARLRRVPLDVEKQACREFTDILDAVRAIANAVTP
Ga0318519_101719553	3300033290	Soil	MAIKESHTREGDMAADTPQDMSLEQQKLVRTLVKALEAIGARLRRVPLDDEKQACRELTDILYAVRAIANAVTP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052216

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences