Metagenome / Metatranscriptome Family F052188

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052188
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	98 residues
Representative Sequence	MGRAFILLITKDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNXVRNIIGIIKSGVTAKNLKSPGAXANPTAVKTFLNGTLVSLSGNNFTPIT
Number of Associated Samples	122
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	13.29 %
% of genes near scaffold ends (potentially truncated)	91.61 %
% of genes from short scaffolds (< 2000 bps)	99.30 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.734 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (35.664 % of family members)
Environment Ontology (ENVO)	Unclassified (76.224 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (87.413 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.94% β-sheet: 0.00% Coil/Unstructured: 48.06%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF09699	Paired_CXXCH_1	2.80
PF00892	EamA	2.80
PF12525	DUF3726	1.40
PF12804	NTP_transf_3	0.70
PF08484	Methyltransf_14	0.70
PF00731	AIRC	0.70
PF08669	GCV_T_C	0.70
PF13578	Methyltransf_24	0.70
PF08547	CIA30	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.73 %
Unclassified	root	N/A	34.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.73 %
Unclassified	root	N/A	34.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.73 %
Unclassified	root	N/A	34.27 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	65.03 %
Unclassified	root	N/A	34.27 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	64.34 %
Unclassified	root	N/A	34.27 %

Name	Rank	Taxonomy	Distribution
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	55.94 %
Unclassified	root	N/A	34.27 %

Name	Rank	Taxonomy	Distribution
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	55.94 %
Unclassified	root	N/A	34.27 %

Name	Rank	Taxonomy	Distribution
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	55.24 %
Unclassified	root	N/A	34.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.27 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	23.08 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000238\|SI36aug09_100mDRAFT_1041446	Not Available	532	Open in IMG/M
3300001349\|JGI20160J14292_10147125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	744	Open in IMG/M
3300001353\|JGI20159J14440_10112885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	839	Open in IMG/M
3300001355\|JGI20158J14315_10146745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	727	Open in IMG/M
3300001956\|GOS2266_1038930	Not Available	1622	Open in IMG/M
3300001972\|GOS2216_10024361	All Organisms → cellular organisms → Bacteria	1648	Open in IMG/M
3300001972\|GOS2216_10063777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1773	Open in IMG/M
3300001972\|GOS2216_10075183	All Organisms → cellular organisms → Bacteria → Proteobacteria	768	Open in IMG/M
3300002040\|GOScombined01_101437795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	848	Open in IMG/M
3300002040\|GOScombined01_104228565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1036	Open in IMG/M
3300003474\|NAP4_1128415	Not Available	536	Open in IMG/M
3300003618\|JGI26381J51731_1094784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	612	Open in IMG/M
3300003620\|JGI26273J51734_10097842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	820	Open in IMG/M
3300004110\|Ga0008648_10157207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	624	Open in IMG/M
3300005514\|Ga0066866_10258450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	601	Open in IMG/M
3300005522\|Ga0066861_10176487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	735	Open in IMG/M
3300005523\|Ga0066865_10362634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	550	Open in IMG/M
3300005523\|Ga0066865_10392118	Not Available	528	Open in IMG/M
3300005934\|Ga0066377_10209252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	600	Open in IMG/M
3300005971\|Ga0066370_10224020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	661	Open in IMG/M
3300005971\|Ga0066370_10313213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	562	Open in IMG/M
3300006166\|Ga0066836_10985825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	508	Open in IMG/M
3300006190\|Ga0075446_10112718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	790	Open in IMG/M
3300006190\|Ga0075446_10189176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	577	Open in IMG/M
3300006337\|Ga0068495_1613111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	787	Open in IMG/M
3300006947\|Ga0075444_10176650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	877	Open in IMG/M
3300007116\|Ga0101667_1064523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	665	Open in IMG/M
3300007133\|Ga0101671_1042546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	663	Open in IMG/M
3300012954\|Ga0163111_10251667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	1550	Open in IMG/M
3300012954\|Ga0163111_12074941	Not Available	573	Open in IMG/M
3300016781\|Ga0182063_1398598	Not Available	549	Open in IMG/M
3300017738\|Ga0181428_1058243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	901	Open in IMG/M
3300017744\|Ga0181397_1178667	Not Available	536	Open in IMG/M
3300017756\|Ga0181382_1143898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	625	Open in IMG/M
3300017756\|Ga0181382_1193808	Not Available	515	Open in IMG/M
3300017763\|Ga0181410_1163846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	621	Open in IMG/M
3300017765\|Ga0181413_1229945	Not Available	549	Open in IMG/M
3300017781\|Ga0181423_1330986	Not Available	557	Open in IMG/M
3300017782\|Ga0181380_1301283	Not Available	524	Open in IMG/M
3300017783\|Ga0181379_1241777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	625	Open in IMG/M
3300017818\|Ga0181565_10732736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	625	Open in IMG/M
3300017986\|Ga0181569_11048853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300018415\|Ga0181559_10773513	Not Available	511	Open in IMG/M
3300018428\|Ga0181568_11382279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	523	Open in IMG/M
3300018876\|Ga0181564_10502041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	650	Open in IMG/M
3300020238\|Ga0211492_1098368	Not Available	508	Open in IMG/M
3300020261\|Ga0211534_1029368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	944	Open in IMG/M
3300020288\|Ga0211619_1044453	Not Available	595	Open in IMG/M
3300020294\|Ga0211520_1070382	Not Available	552	Open in IMG/M
3300020319\|Ga0211517_1057140	Not Available	766	Open in IMG/M
3300020334\|Ga0211593_1073888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	711	Open in IMG/M
3300020337\|Ga0211508_1102268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	653	Open in IMG/M
3300020368\|Ga0211674_10158901	Not Available	582	Open in IMG/M
3300020376\|Ga0211682_10102093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1149	Open in IMG/M
3300020376\|Ga0211682_10275467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	637	Open in IMG/M
3300020387\|Ga0211590_10219993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	594	Open in IMG/M
3300020388\|Ga0211678_10338022	Not Available	607	Open in IMG/M
3300020400\|Ga0211636_10270739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	650	Open in IMG/M
3300020402\|Ga0211499_10333260	Not Available	526	Open in IMG/M
3300020403\|Ga0211532_10414102	Not Available	501	Open in IMG/M
3300020404\|Ga0211659_10490093	Not Available	526	Open in IMG/M
3300020405\|Ga0211496_10313217	Not Available	586	Open in IMG/M
3300020407\|Ga0211575_10310816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	653	Open in IMG/M
3300020408\|Ga0211651_10280243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	633	Open in IMG/M
3300020422\|Ga0211702_10177513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	637	Open in IMG/M
3300020428\|Ga0211521_10190498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	941	Open in IMG/M
3300020430\|Ga0211622_10447903	Not Available	553	Open in IMG/M
3300020433\|Ga0211565_10517153	Not Available	518	Open in IMG/M
3300020436\|Ga0211708_10011384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	3332	Open in IMG/M
3300020436\|Ga0211708_10303787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	649	Open in IMG/M
3300020436\|Ga0211708_10328446	Not Available	624	Open in IMG/M
3300020436\|Ga0211708_10341356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	612	Open in IMG/M
3300020437\|Ga0211539_10302349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	663	Open in IMG/M
3300020438\|Ga0211576_10448419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	656	Open in IMG/M
3300020439\|Ga0211558_10321384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	723	Open in IMG/M
3300020439\|Ga0211558_10529018	Not Available	535	Open in IMG/M
3300020442\|Ga0211559_10370685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	663	Open in IMG/M
3300020445\|Ga0211564_10422019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	654	Open in IMG/M
3300020448\|Ga0211638_10157428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1033	Open in IMG/M
3300020451\|Ga0211473_10390181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	712	Open in IMG/M
3300020451\|Ga0211473_10682803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	515	Open in IMG/M
3300020454\|Ga0211548_10583783	Not Available	546	Open in IMG/M
3300020455\|Ga0211664_10175297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1000	Open in IMG/M
3300020456\|Ga0211551_10617169	Not Available	514	Open in IMG/M
3300020457\|Ga0211643_10388640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	685	Open in IMG/M
3300020461\|Ga0211535_10306223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	711	Open in IMG/M
3300020463\|Ga0211676_10520096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	625	Open in IMG/M
3300020465\|Ga0211640_10279742	Not Available	929	Open in IMG/M
3300020465\|Ga0211640_10631809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	576	Open in IMG/M
3300020466\|Ga0211714_10483238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	585	Open in IMG/M
3300020474\|Ga0211547_10426949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	666	Open in IMG/M
3300020475\|Ga0211541_10388072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	682	Open in IMG/M
3300020478\|Ga0211503_10406485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	729	Open in IMG/M
3300021347\|Ga0213862_10322501	Not Available	549	Open in IMG/M
3300021443\|Ga0206681_10265553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	667	Open in IMG/M
3300022074\|Ga0224906_1123223	Not Available	748	Open in IMG/M
3300022853\|Ga0222652_1059118	Not Available	519	Open in IMG/M
(restricted) 3300023109\|Ga0233432_10311626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	722	Open in IMG/M
3300023110\|Ga0255743_10424872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	649	Open in IMG/M
3300023178\|Ga0255759_10591490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	633	Open in IMG/M
3300024191\|Ga0228636_1116469	Not Available	597	Open in IMG/M
3300024297\|Ga0228658_1170363	Not Available	517	Open in IMG/M
3300024319\|Ga0228670_1108861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	547	Open in IMG/M
3300025673\|Ga0209494_1187504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	574	Open in IMG/M
3300025690\|Ga0209505_1184363	Not Available	530	Open in IMG/M
3300025699\|Ga0209715_1084905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1214	Open in IMG/M
3300025770\|Ga0209362_1243912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	583	Open in IMG/M
3300025830\|Ga0209832_1146579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	699	Open in IMG/M
3300025869\|Ga0209308_10385752	Not Available	562	Open in IMG/M
3300025869\|Ga0209308_10406255	Not Available	542	Open in IMG/M
3300025892\|Ga0209630_10335167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	675	Open in IMG/M
3300026093\|Ga0208624_1120686	Not Available	534	Open in IMG/M
3300027062\|Ga0208959_1026714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	810	Open in IMG/M
3300027170\|Ga0208963_1056734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	594	Open in IMG/M
3300027525\|Ga0208437_1140760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	543	Open in IMG/M
3300027687\|Ga0209710_1195591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	693	Open in IMG/M
3300027687\|Ga0209710_1248466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	577	Open in IMG/M
3300027702\|Ga0209036_1108418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	829	Open in IMG/M
3300027752\|Ga0209192_10272978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	618	Open in IMG/M
3300027779\|Ga0209709_10262435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	759	Open in IMG/M
3300027780\|Ga0209502_10203293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	910	Open in IMG/M
3300027780\|Ga0209502_10431865	Not Available	532	Open in IMG/M
3300027791\|Ga0209830_10196462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	942	Open in IMG/M
3300027801\|Ga0209091_10295762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	768	Open in IMG/M
3300028111\|Ga0233397_1148668	Not Available	544	Open in IMG/M
3300028196\|Ga0257114_1191596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	760	Open in IMG/M
3300028197\|Ga0257110_1161864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	892	Open in IMG/M
3300031142\|Ga0308022_1216629	Not Available	530	Open in IMG/M
3300031143\|Ga0308025_1292629	Not Available	528	Open in IMG/M
3300031519\|Ga0307488_10783467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	530	Open in IMG/M
3300031519\|Ga0307488_10833150	Not Available	507	Open in IMG/M
3300031599\|Ga0308007_10237167	Not Available	623	Open in IMG/M
3300031630\|Ga0308004_10337292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	573	Open in IMG/M
3300031659\|Ga0307986_10439834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	512	Open in IMG/M
3300031675\|Ga0302122_10279597	Not Available	596	Open in IMG/M
3300031721\|Ga0308013_10277595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	595	Open in IMG/M
3300031721\|Ga0308013_10297114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	568	Open in IMG/M
3300031773\|Ga0315332_10956690	Not Available	511	Open in IMG/M
3300031774\|Ga0315331_11193319	Not Available	507	Open in IMG/M
3300032011\|Ga0315316_10750829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	807	Open in IMG/M
3300032011\|Ga0315316_11593065	Not Available	511	Open in IMG/M
3300032073\|Ga0315315_11061799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	723	Open in IMG/M
3300032278\|Ga0310345_12306052	Not Available	520	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.30%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified	41.26%
Oceanic	Environmental → Aquatic → Marine → Oceanic	18.88%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	17.48%
Strait	Environmental → Aquatic → Marine → Strait	6.99%
Coastal	Environmental → Aquatic → Marine → Coastal	4.90%
Pelagic	Environmental → Aquatic → Marine → Pelagic	3.50%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	3.50%
Inlet	Environmental → Aquatic → Marine → Inlet	1.40%
Volcanic	Environmental → Aquatic → Marine → Volcanic	1.40%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	41.26%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	16.78%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	11.19%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	6.99%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	5.59%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.90%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	3.50%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	3.50%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	2.10%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	1.40%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	1.40%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.70%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	35.66%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	15.38%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	6.99%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	6.99%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	5.59%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	4.90%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	4.20%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	3.50%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	3.50%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	2.80%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	1.40%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	1.40%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.70%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.70%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.70%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	0.70%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.70%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.70%
Methane Seep Mesocosm	Environmental → Aquatic → Marine → Unclassified → Unclassified → Methane Seep Mesocosm	0.70%
Estuarine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Estuarine	0.70%
Volcanic Co2 Seeps	Environmental → Aquatic → Marine → Volcanic → Unclassified → Volcanic Co2 Seeps	0.70%
Volcanic Co2 Seep Seawater	Environmental → Aquatic → Marine → Volcanic → Unclassified → Volcanic Co2 Seep Seawater	0.70%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000238	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 36 08/11/09 100m	Environmental	Open in IMG/M
3300001349	Pelagic Microbial community sample from North Sea - COGITO 998_met_10	Environmental	Open in IMG/M
3300001353	Pelagic Microbial community sample from North Sea - COGITO 998_met_09	Environmental	Open in IMG/M
3300001355	Pelagic Microbial community sample from North Sea - COGITO 998_met_08	Environmental	Open in IMG/M
3300001956	Marine microbial communities from Rangirora Atoll, Polynesia Archipelagos - GS051	Environmental	Open in IMG/M
3300001972	Marine microbial communities from the Sargasso Sea - GS000d	Environmental	Open in IMG/M
3300002040	GS000c - Sargasso Station 3	Environmental	Open in IMG/M
3300003474	Estuarine microbial communities from the Sarno estuary, Gulf of Naples, Italy - Sample Station 4	Environmental	Open in IMG/M
3300003618	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_165m_DNA	Environmental	Open in IMG/M
3300003620	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA	Environmental	Open in IMG/M
3300004110	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_100m_DNA	Environmental	Open in IMG/M
3300005514	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263	Environmental	Open in IMG/M
3300005522	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV257	Environmental	Open in IMG/M
3300005523	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV265	Environmental	Open in IMG/M
3300005934	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_SurfaceB_ad_5m_LV_B	Environmental	Open in IMG/M
3300005971	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_SurfaceA_ad_5m_LV_A	Environmental	Open in IMG/M
3300006166	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91	Environmental	Open in IMG/M
3300006190	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA	Environmental	Open in IMG/M
3300006337	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT237_3_0025m	Environmental	Open in IMG/M
3300006947	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA	Environmental	Open in IMG/M
3300007116	Seawater microbiome, Papua New Guinea CO2 seep, Upa-Upasina 'bubble' site, waterEBis3	Environmental	Open in IMG/M
3300007133	Seawater microbiome, Papua New Guinea CO2 seep, Dobu 'bubble', water-ds	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300016781	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101409CT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017738	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12	Environmental	Open in IMG/M
3300017744	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23	Environmental	Open in IMG/M
3300017756	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22	Environmental	Open in IMG/M
3300017763	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20	Environmental	Open in IMG/M
3300017765	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300017782	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19	Environmental	Open in IMG/M
3300017783	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018415	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018876	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020238	Marine microbial communities from Tara Oceans - TARA_B000000475 (ERX556004-ERR599068)	Environmental	Open in IMG/M
3300020261	Marine microbial communities from Tara Oceans - TARA_B100000401 (ERX556096-ERR598970)	Environmental	Open in IMG/M
3300020288	Marine microbial communities from Tara Oceans - TARA_B100000161 (ERX556132-ERR599045)	Environmental	Open in IMG/M
3300020294	Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556124-ERR599153)	Environmental	Open in IMG/M
3300020319	Marine microbial communities from Tara Oceans - TARA_S200000501 (ERX556039-ERR599073)	Environmental	Open in IMG/M
3300020334	Marine microbial communities from Tara Oceans - TARA_B100001121 (ERX555938-ERR599091)	Environmental	Open in IMG/M
3300020337	Marine microbial communities from Tara Oceans - TARA_E500000075 (ERX289009-ERR315861)	Environmental	Open in IMG/M
3300020368	Marine microbial communities from Tara Oceans - TARA_B100001027 (ERX556049-ERR599093)	Environmental	Open in IMG/M
3300020376	Marine microbial communities from Tara Oceans - TARA_B100000795 (ERX555997-ERR599121)	Environmental	Open in IMG/M
3300020387	Marine microbial communities from Tara Oceans - TARA_B100000405 (ERX556119-ERR599023)	Environmental	Open in IMG/M
3300020388	Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064)	Environmental	Open in IMG/M
3300020400	Marine microbial communities from Tara Oceans - TARA_B100001115 (ERX555947-ERR598992)	Environmental	Open in IMG/M
3300020402	Marine microbial communities from Tara Oceans - TARA_B000000609 (ERX555971-ERR599057)	Environmental	Open in IMG/M
3300020403	Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)	Environmental	Open in IMG/M
3300020404	Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978)	Environmental	Open in IMG/M
3300020405	Marine microbial communities from Tara Oceans - TARA_B000000532 (ERX556129-ERR599012)	Environmental	Open in IMG/M
3300020407	Marine microbial communities from Tara Oceans - TARA_B100001105 (ERX556033-ERR599115)	Environmental	Open in IMG/M
3300020408	Marine microbial communities from Tara Oceans - TARA_B100000925 (ERX555963-ERR599118)	Environmental	Open in IMG/M
3300020422	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_076 - TARA_B100000513 (ERX555999-ERR599126)	Environmental	Open in IMG/M
3300020428	Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)	Environmental	Open in IMG/M
3300020430	Marine microbial communities from Tara Oceans - TARA_B100000683 (ERX556126-ERR599160)	Environmental	Open in IMG/M
3300020433	Marine microbial communities from Tara Oceans - TARA_B100001989 (ERX556106-ERR599030)	Environmental	Open in IMG/M
3300020436	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)	Environmental	Open in IMG/M
3300020437	Marine microbial communities from Tara Oceans - TARA_B100000282 (ERX555906-ERR599074)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300020439	Marine microbial communities from Tara Oceans - TARA_B100001939 (ERX556062-ERR599029)	Environmental	Open in IMG/M
3300020442	Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)	Environmental	Open in IMG/M
3300020445	Marine microbial communities from Tara Oceans - TARA_B100001996 (ERX555961-ERR599087)	Environmental	Open in IMG/M
3300020448	Marine microbial communities from Tara Oceans - TARA_B100000941 (ERX555919-ERR598954)	Environmental	Open in IMG/M
3300020451	Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996)	Environmental	Open in IMG/M
3300020454	Marine microbial communities from Tara Oceans - TARA_B100001769 (ERX556037-ERR599170)	Environmental	Open in IMG/M
3300020455	Marine microbial communities from Tara Oceans - TARA_B100000965 (ERX555917-ERR599081)	Environmental	Open in IMG/M
3300020456	Marine microbial communities from Tara Oceans - TARA_B100001741 (ERX555984-ERR599123)	Environmental	Open in IMG/M
3300020457	Marine microbial communities from Tara Oceans - TARA_B100001113 (ERX555941-ERR599014)	Environmental	Open in IMG/M
3300020461	Marine microbial communities from Tara Oceans - TARA_B100000401 (ERX556127-ERR599150)	Environmental	Open in IMG/M
3300020463	Marine microbial communities from Tara Oceans - TARA_B100001057 (ERX555988-ERR599050)	Environmental	Open in IMG/M
3300020465	Marine microbial communities from Tara Oceans - TARA_B100000579 (ERX556060-ERR598961)	Environmental	Open in IMG/M
3300020466	Marine microbial communities from Tara Oceans - TARA_B100001540 (ERX556059-ERR598968)	Environmental	Open in IMG/M
3300020474	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)	Environmental	Open in IMG/M
3300020475	Marine microbial communities from Tara Oceans - TARA_B100002029 (ERX555951-ERR599001)	Environmental	Open in IMG/M
3300020478	Marine microbial communities from Tara Oceans - TARA_B100000029 (ERX556025-ERR599111)	Environmental	Open in IMG/M
3300021347	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266	Environmental	Open in IMG/M
3300021443	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 12015	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300022853	Saline water microbial communities from Ace Lake, Antarctica - #371	Environmental	Open in IMG/M
3300023109 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MG	Environmental	Open in IMG/M
3300023110	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG	Environmental	Open in IMG/M
3300023178	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG	Environmental	Open in IMG/M
3300024191	Seawater microbial communities from Monterey Bay, California, United States - 45D	Environmental	Open in IMG/M
3300024297	Seawater microbial communities from Monterey Bay, California, United States - 71D	Environmental	Open in IMG/M
3300024319	Seawater microbial communities from Monterey Bay, California, United States - 85D	Environmental	Open in IMG/M
3300025673	Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN1B Hudson Canyon (SPAdes)	Environmental	Open in IMG/M
3300025690	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331 (SPAdes)	Environmental	Open in IMG/M
3300025699	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503 (SPAdes)	Environmental	Open in IMG/M
3300025770	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_165m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025830	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407 (SPAdes)	Environmental	Open in IMG/M
3300025869	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)	Environmental	Open in IMG/M
3300025892	Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)	Environmental	Open in IMG/M
3300026093	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_DCM_ad_71m_LV_A (SPAdes)	Environmental	Open in IMG/M
3300027062	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - C0912_C27A4_80 (SPAdes)	Environmental	Open in IMG/M
3300027170	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - C0912_C43A7_35 (SPAdes)	Environmental	Open in IMG/M
3300027525	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705 (SPAdes)	Environmental	Open in IMG/M
3300027687	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)	Environmental	Open in IMG/M
3300027702	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - DCM_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027752	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)	Environmental	Open in IMG/M
3300027779	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)	Environmental	Open in IMG/M
3300027780	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90 (SPAdes)	Environmental	Open in IMG/M
3300027791	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)	Environmental	Open in IMG/M
3300027801	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)	Environmental	Open in IMG/M
3300028111	Seawater microbial communities from Monterey Bay, California, United States - 35D	Environmental	Open in IMG/M
3300028196	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_10m	Environmental	Open in IMG/M
3300028197	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_10m	Environmental	Open in IMG/M
3300031142	Marine microbial communities from water near the shore, Antarctic Ocean - #353	Environmental	Open in IMG/M
3300031143	Marine microbial communities from water near the shore, Antarctic Ocean - #422	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031599	Marine microbial communities from water near the shore, Antarctic Ocean - #71	Environmental	Open in IMG/M
3300031630	Marine microbial communities from water near the shore, Antarctic Ocean - #38	Environmental	Open in IMG/M
3300031659	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82	Environmental	Open in IMG/M
3300031675	Marine microbial communities from Western Arctic Ocean, Canada - CB21_SCM	Environmental	Open in IMG/M
3300031721	Marine microbial communities from water near the shore, Antarctic Ocean - #181	Environmental	Open in IMG/M
3300031773	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915	Environmental	Open in IMG/M
3300031774	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915	Environmental	Open in IMG/M
3300032011	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
SI36aug09_100mDRAFT_10414461	3300000238	Marine	MGRAFILLITNDIERKAIIKKAKKTIPKDLKLDFRFKTCFVEMINPANIQNVKNIIGIIKSGVTAKNLKSPGAANPTAVNTFLNETLVSLSGNN
JGI20160J14292_101471251	3300001349	Pelagic Marine	MGRAFILLITNDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNVRNIIGIIKSGVTAKNLKSPGAANPTAVNTFL
JGI20159J14440_101128853	3300001353	Pelagic Marine	MGRAFILLITNDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNVRNIIGIIKSGVTAKNLKSPGAANPTAVNTFLNETFVSLSG
JGI20158J14315_101467453	3300001355	Pelagic Marine	LLIGKAFILLITKDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNVKNIIGIIKSGVTAKNLKSPGAANPTAVKTFLNETLVSLSGNNF
GOS2266_10389302	3300001956	Marine	VLIGIAFNLLITNEIDKNAIIKNDKKTIPNDFKFDFKFKICLVAIINEAKIQN*VRKIIKSTNSGVTAKNLISPGACAYPTAIRTLLNGIFLSL
GOS2216_100243611	3300001972	Marine	MFILLITKVIDRKAIIKKDNKTIPKDLKLDFKFKISFVEMIKPAKIQNVRKIIGIIKSGVTAKNLNKPGAAKPTAVRTFLNDTLVCLSGKKFNTYYK
GOS2216_100637774	3300001972	Marine	MDKKAIIKNDKSTIPKDLKLDFKLNICLVEIIKPAKIQNWVRKIIGIIKSGVTAKNLNKPGACAKPTAVKTFLKETFVCLSGNNLTP
GOS2216_100751831	3300001972	Marine	MTKEIDKNAIIKKDKKTIPNALKLDFRLRTCFVAIISDAKIQNVKNIIGITKSGVTAKNLNKPGAAYPTATSTFLNVTLVSLSENSLTPTYINKN*PNKPS
GOScombined01_1014377951	3300002040	Marine	MNVIDKKAIIRKDKNTIPNDFKLDFKFKICLVDIIRDAKIQNVRKIIGRTKSGVTAKNLIKPGATYPTAIKIFLNGTLLPL
GOScombined01_1042285651	3300002040	Marine	MFILLITNEIDKNAIIKKDKSTIPKDLKLDFKLNICLVEIIKPAKIQNWVRKIIGIIKSGVTAKNLNKPGACANPTAVKTFLKETLVCLSGNSLTP
NAP4_11284152	3300003474	Estuarine	MFILLITKVIDRKAIIKKDNNTIPKDLKLDFKFKISFVEMIKPAKIQNVRKIIGIIKSGVTAKNLNKPGAAKPTAVRTFLNDTLVCLSGKSLTPITKIKIAHINQVT
JGI26381J51731_10947843	3300003618	Marine	MGSIFILLITKEIDKNAIIKNDKNTIPKDLILDFKPSTCFVEIINPAKIQNCVRNIIGIIIFGVTAKNLNKPGA*AKPTAVNTFLKGTFVCLSGKSLTPITYIKIAQ
JGI26273J51734_100978421	3300003620	Marine	MGRAFILLITNDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEIINPANIQNVRNIIGIIKSGVTAKNLKSPGAANPTAVNTFLN
Ga0008648_101572073	3300004110	Marine	MGSIFILLITKEIDKNAIIKNDKNTIPKDLILDFKPSTCFVEIINPAKIQNCVRNIIGIIIFGVTAKNLNKPGA*AKPTAVNTFLKGTFVCL
Ga0066866_102584501	3300005514	Marine	MTKDIDKKAIIKNDKNTTPKDLKFDLRFNICFVDIIRAAKIQNCVRKIIGIIKSGVIAKNLNRPGA*ANPTAVRTFLNGTFVCFSGKSF
Ga0066861_101764871	3300005522	Marine	VFAGRAFNLLITKDMEIKAIIKKDKITMPNALKLDFKFKVYLVEIINPAKIHN*VIKIIGITKSGVTAKNLNIPGACAYPTPIRIFLKGTLLSLSGNNLAPITYINTPQTNQVRI
Ga0066865_103626343	3300005523	Marine	MDKNTIIKNDKKTIPKDLILDFKPNTCFVEIINPAKIQNCVRKIIGIIILGVTAKNLSKPGA*ANPTAVKTFLKGTFAFLSGKSFT
Ga0066865_103921182	3300005523	Marine	LIGIAFILLITKDIDKKAIIKKDKKTIPKDLKFDFKLRICLVEIIKAAKIQNVKKIIGIIKSGVTAKNLNKPGAAKPTAVKTFLKGTFVCLSGNSFTPITNINIAHINHV
Ga0066377_102092523	3300005934	Marine	MNVIERKAIIRKDKNTTPKDFRLDFKFNICFVDIIKEANIQNCVRKIIGKTKSGVTAKNLIKPGA*AYPTAINTFLNGTLLPLSGKIFTPITKIKIAQTN
Ga0066370_102240201	3300005971	Marine	LIGKAFIRLITNEIDKKTIIKNDIKTIPNDFKFDLRLRTCRVDIINPAKIQNCVRKIIGIINSGVTAKNLNRPGA*AKPTAVNTFLNGTLLFLSGNSLTPITKINIAQTNQ
Ga0066370_103132133	3300005971	Marine	LIGKAFIRLITNEIDKKTIIKNDIKTIPNDFKFDLRLRTCRVEIINPAKIQNCVRKIIGIINSGVTAKNLSRPGA*AKPTAVNTFLNGTLLFLSGNSFTPITK
Ga0066836_109858251	3300006166	Marine	MTKAIEMKAIIKKAKITIPNALKFDFKFKICLVEIINPAKIQNVIKITGIIKSGVTAKNLNIPGAAYPTPTRTLLKGILL
Ga0075446_101127181	3300006190	Marine	MGRAFILLITKDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNVRNIIGIIKSGVTAKNLKSPGAANPTAVNTFL
Ga0075446_101891763	3300006190	Marine	LLIGRAFILLITKDIERKAIIKKAKKTIPNDLKLDFKFKICFVEIIKLANIQNVRNIIGIIKSGVTAKNLKRPGAAKPTAVNTFLNGTL
Ga0068495_16131113	3300006337	Marine	MTKEIDKNAIIKKDKSTIPKDLKLDFKLNICLVEIIKPAKIQNWVRKIIGIIKSGVTAKNLNKPGACANPTAVKTFLNETLVCLSGNNFTPIT
Ga0075444_101766503	3300006947	Marine	MGKAFILLITNDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNVRNIIGIIKSGVTAKNLKSPGAANPTAVNTFLN
Ga0101667_10645233	3300007116	Volcanic Co2 Seep Seawater	LIGKAFILLITNEIDKKTIIKNDIKTIPNDFKLDLRLRTCRVEIINPAKIQNCVRKIIGIINSGVTAKNLNKPGA*AKPTAVNTFLNGTLLF
Ga0101671_10425461	3300007133	Volcanic Co2 Seeps	LIGKAFIRLITNEIDKKTIIKNDIKTIPNDIKFDLRLRTCRVEIINPAKIQNCVRKIIGIINSGVTAKNLKRPGA*AKPTAVNIFLNGTLLFLSGNSLTPITKINIAQTNQVNIA
Ga0163111_102516674	3300012954	Surface Seawater	LIGNSFILLITKEIDKKAIVKKDKKTIPKDLKLDLRFSICFVEIIKAAKIQNCVRKIIGIIKSGVIAKNLNKPGACAKPTAVKTFLKFTLVCLSGNNLTPITKINIAQTNQ
Ga0163111_120749411	3300012954	Surface Seawater	MINAIDRKAIIKKERKTTPKALKLDFKFNICFVEIIKPAKIQNCVIKIIGIIKSGVTAKNLNKPGACAKPTVVKTFLKEKEFKDLNDICDQF*
Ga0182063_13985982	3300016781	Salt Marsh	LTGSIFILLITNEIDKKAIIKKDNKTIPKDLKLDFKFKISFVEIIKPAKIQNXVRKIIGIIKSGVTAKNLNKPGAXAKPTAVRTFLNDTFVCLSGKSLTPITKMKIAHINQVTIAVR
Ga0181428_10582431	3300017738	Seawater	MNVIDRKAIIRNDKNTIPNDFKLDFKFKICLVDIIRDANIQNXVRKIMGRTRSGVTAKNLIKPGAXAYPTAIKIFLKGTLLPLSGKIF
Ga0181397_11786673	3300017744	Seawater	MXLIGSAFILLITNEIDKNAIIKKDKNTIPKDFKFDFRFKTCFVDIIKAAKIQNXVKKIIGIIKSGVTAKNLSKPGAXAKPTAVKTFLKGTLVCLSGNNFTPMTK
Ga0181382_11438981	3300017756	Seawater	MXLIGIASILLITKEIDKNAIIKNDKKTIPKDFKFDLRFNICLVEMIKAAKIQNXVKKIIGIIKSGVTAKNLNKPGAXAKPTATKTFL
Ga0181382_11938082	3300017756	Seawater	MXLIGIAFIRLITKEIDKKAIIKKDKKTIPNDLKFDFRFNICLVDIINAANIQNCVKKIIGIIKSGVTAKNLNKPGACAKPTAVKTFLNGTFVCLSGNNFT
Ga0181410_11638461	3300017763	Seawater	LFIGKTFILLITKDIDRKTIIRKDKNTIPKDFKLDFKFKICFVEIINPANIQNCVKKIIGIIKSGVTAKNLIKPGACAKPTAVNTFLNGTFVCFSGNSLTPIT
Ga0181413_12299452	3300017765	Seawater	MXLIGNAFILLITKEIDKKAIIKKDKKTIPKDFKFDLRFKICFVEIIKAAKIQNXVKKIIGIIKSGVTAKNLNKPGAXANPTAVKTFLKGTFVCLSGNSFTPITKINNAQI
Ga0181423_13309862	3300017781	Seawater	MTKEIDKKAIIKKDKNTIPNDLKFDLRFKTCFVEIISPAKIQNXVKKIIGIIKSGVTAKNLNKPGAXAKPTAVKTFLNGTLLCLSGN
Ga0181380_13012832	3300017782	Seawater	MRLITKEIDKKTIIKKDKNIIPKDLKFDLMFKTCFVDIINAAKIQNCVIKIIGIIKSGVMAKNLKRPGACAKPTAVNTFLKDTLTCLSGNNLTPITKTSIA
Ga0181379_12417771	3300017783	Seawater	MGRAFILLITNDIERKAIIKKAKKTIPNDLKLDFKFKTSFVEIINPANIQNXDRNIIGIIKSGVTAKNLKSPGAXANPTAVKTFLNGTFVSLSGN
Ga0181565_107327361	3300017818	Salt Marsh	MFILLITKVIDRKAIIKKDNKTIPKDLKLDFKFKISFVEMIKPAKIQNXVRKIIGIIKSGVTAKNLNKPGAXAKPTAVRTFLNDTLVCLSGKSLTPITKMKIAHINQVTI
Ga0181569_110488531	3300017986	Salt Marsh	MFILLITNVIDRKAIIKKDNKTIPKDLKLDFKFKISFVEMIKPANIQNXVRKIIGIIKSGVTAKNLNKPGAXAKPTAVRTFLNDTF
Ga0181559_107735132	3300018415	Salt Marsh	MFILLITKVIDRKAIIKKDNKTIPKDLKLDFKFKISFVEMIRPAKIQNXVRKIIGIIKSGVTAKNLNKPGAXAKPTAVRTFLNDTLVCLSGKSLTPITKMKIAHINQVTIAVRP
Ga0181568_113822793	3300018428	Salt Marsh	MFILLITKVIDRKAIIKKDNKTIPKDLKLDFKFKISFVEMIKPAKIQNXVRKIIGIIKSGVTAKNLNKPGAXAKPTAVRTFL
Ga0181564_105020413	3300018876	Salt Marsh	MFILLITKVIDRKAIIKKDNKTIPKDLKLDFKFKISFVEMIKPAKIQNXVRKIIGIIKSGVTAKNLNKPGAXAKPTAVRTFLNDTLVCLSGKSLTPITKMKIAHIN
Ga0211492_10983681	3300020238	Marine	LTGSIFILLITNEIDKKAIIKKDNKTIPKDLKLDFKFKISFVEMIKPAKIQNXVRKIIGIIKSGVTAKNLNKPGAXAKPTAVKTFLNDTFVCLSGKSLTPITKIKI
Ga0211534_10293683	3300020261	Marine	MNVIDRKAIIRKDKNTIPNDFKLDFKFKICLVDIIRDANIQNXVRKIIGRTKSGVTAKNLIKPGAXAYPTAIKIFLKGTLLPLS
Ga0211619_10444531	3300020288	Marine	MNVIERKAIIRKDKNTTPKDFKLDFKFNICFVDIIKEANIQNCVRKIIGKTKSGVTAKNLIKPGAXAYPTAINTFLNGTLLPLSG
Ga0211520_10703822	3300020294	Marine	MNVIDRKAIIRKDKNTIPNDFKLDFKFKICLVEIIRDAKIQNXVRKIIGRTKSGVTAKNLIKPGAXAYPTAIKIFLKGTLLPLSGKIFTPITKI
Ga0211517_10571402	3300020319	Marine	MTKEIDKKAIIKKDKNTIPNDLKFDLRFKTCFVEIISPAKIQNXVKKIIGIIKSGVTAKNLSKPGAXAKPTAVKTFLKGTL
Ga0211593_10738883	3300020334	Marine	LTGRTSILLITKEIDRKAIIKKDKNTTPNDFKFDFKFKICFVAIIKAAKIQNXVKNMIGTINSGVTAKNLINPGACANPTAVKTFLKDTLVCLSG
Ga0211508_11022681	3300020337	Marine	MNVIDRKAIIRKDKNTIPNDFKLDFKFKICLVEIIRDAKIQNXVRKIIGRTKSGVTAKNLIKPGAXAYPTAIKIFLKGTLLPLSGKIFTPITKIKIAQTNHVKRAVKP
Ga0211674_101589011	3300020368	Marine	MTKEIDKKAIIKKDRNTIPKDLRLDLRFKICFVEIISPAKIQNCVKKIIGIINSGVTAKNLNKPGAXANPTAVKTFLKGTLLCLSGNNFTPITKINIAQISQVIIAVS
Ga0211682_101020933	3300020376	Marine	MLLIVKLSIXLITKDIDIKAIIKKDKNTTPNDLKLDFKFKICFVEIIKPANIQSXVKNIIGIIKFGVTAKNLRRPGECAKPTAIKTFLNDTFVSLSGNNLTPTTNIHKAQTNQVRIEV
Ga0211682_102754671	3300020376	Marine	MGKVSIXLITNDIDIKAIIKNDKNTIPNDLKLDFKPKICFVEIIKPANIQSXVKNIIGIIKSGVTAKNLMRPGEWAKPTAIKIFLKGTFVSLSGNSFTPTTNINKAHTNQVRI
Ga0211590_102199933	3300020387	Marine	LTGSIFILLITNEIDKKAIIKKDNKTIPKDLKLDFKFKISFVEMIKPAKIQNXVRKIIGIIKSGVTAKNLNKPGACANPTAVRTFLNETLVCLSGKSLTPITKMKIAHINQVTIAV
Ga0211678_103380221	3300020388	Marine	MVKAFILLITKDIERKAIIKKDKKTTPNDLKLDFKFKICFVEIINPANIQNXVRNIIGIIKSGVTAKNLKSPGAXANPTPVNTFLNETFESLSGNNFTPIT
Ga0211636_102707391	3300020400	Marine	MFILLITNEIDKKAIIKKDKKTIPKDLKFDLRFKICFVEIIKPAKIQNCVKNIIGIIKSGVKAKNLKRPGAXAKPTAVKTFLKDTLVCLSG
Ga0211499_103332602	3300020402	Marine	LFTGRTFILLITNEIDKNAIIKKDKKTIPKDFKLDFKFKICLVDIIKPAKIQNCVKKIIGIIKSGVTAKKRIKPGACAKPTAVKTFLNGTFVCLSGKSFTPITNIKIAQMSHVNI
Ga0211532_104141022	3300020403	Marine	MDKKAMIRKDRNTIPKDLKFDLRLSICFVEIIKAANIQNXVRKIIGIINSGVIAKNLNNPGAXANPTAVKTFLKGILLVCLSGNSLTPITKINIAQTNHVIIAVNP
Ga0211659_104900931	3300020404	Marine	LTGSIFILLITNEIDKKAIIKKDNKTIPKDLKLDFKFKISFVEIIKPAKIQNXVRKIIGIIKSGVTAKNLNKPGAXAKPTAVRTFLNETLVCLSGKSLTPITKMK
Ga0211496_103132171	3300020405	Marine	MNVIERKAIIRKDKNTTPKDFKLDFKFNICFVDIIKEANIQNCVRKIIGKTKSGVTAKNLIKPGAXAYPTAINTFLNGTLLPLSGKIFTPITKIK
Ga0211575_103108163	3300020407	Marine	VLIGRAFILLITKDIDKKAIIRKDKKTIPKDFIFDFKFKICFVDIINPAKIQNXVRKIIGIIKSGVTAKNLNNPGEXAYPTAIKIFLNGTLVSLSGN
Ga0211651_102802433	3300020408	Marine	LIGIVSILLITKEIDKKAMIKKDKNTIPNDLMFDLRFKICFVDIIKAAKIQNXVKKIIGIIRSGVTAKNLNNPGAWANPTAVKTFLNDTLVCLSGNSFTPITKIKTAQ
Ga0211702_101775131	3300020422	Marine	MAFILLITKVIDKKAIIKKDKNTIPKDFKFDLRFKICFVDIINAAKIQNXVKKIIGIISSGVTAKNLNKPGACANPTAVRTFLKDTFVCLSGNNFTPITKIKIAQT
Ga0211521_101904981	3300020428	Marine	MWLIGIAFILLITKEIDKKAIIKKDKKTIPKDLKFDLRFNICLVDIIKAAKIQNCVRKIIGIIKSGVTAKNLNNPGAXANPTAVKTFLKGTLVCLSGKSFTPIT
Ga0211622_104479032	3300020430	Marine	MTKDIDKKAIIKKDKKTIPKDFIFDLSPRICLVAMIKAAKIQNXVKKIIGIIKSGVTAKNLIKPGACANPTAVKTFLNDTLVCLSGNSFTPITKINIAQINQVIIAVNPDI
Ga0211565_105171531	3300020433	Marine	LIGKAFIRLITNEIDKKTIIKNDIKTIPNDFKFDLRLRTCRVEIINPAKIQNCVRKIIGIINSGVTAKNLNRPGAXAKPTAVSIFLNGTLLFLSGNSLTPITKINIAQTNQVNIAVTPD
Ga0211708_100113841	3300020436	Marine	LLTGRTFILLITKEIDKKAIIKKDKKTIPKDFKLDFKFKICLVDIIKPAKIQNCVKKIIGIIKSGVTAKKRIKPGACAKPTAVKTFLNGTFVCLSGKSFTPITNIKIAQMSHVNIAVR
Ga0211708_103037871	3300020436	Marine	MNVIERKAIIRNDKNTIPKDFKLDFKFNICLVDIIREAKIQNCVRKIIGKTKSGVTAKNLIRPGAXAYPTAIKTFLNGTLLPLSGKIFTPITNIKIAQTNHVK
Ga0211708_103284463	3300020436	Marine	MNVIERKAIIRKDKNTTPKDFKLDFKFNICFVDIIKEANIQNCVRKIIGKTKSGVTAKNLIKPGAXAYPTAIKTFLNGTLLPLSGKIFTPITNIKIAQTNHVKRAVKP
Ga0211708_103413563	3300020436	Marine	LIGKAFIRLITNEIDKKTIIKNDIKTIPNDFKFDLRLRTCRVEIINPAKIQNCVRKIIGIINSGVTAKNLNRPGAXAKPTAVNTFLNGTLLFLSGNSLTPI
Ga0211539_103023491	3300020437	Marine	MDKKAIIKKDKKIIPNDFKFDFKFKICFVAIINAAKIQNXVRNIIGTINSGVTAKNLSSPGEWAKPTAVKTFLKETF
Ga0211576_104484191	3300020438	Marine	MXLIGSAFILLITNEIDKNAIIKKDKNTIPKDFKFDFRFKTCFVDIIKAAKIQNXVKKIIGIIKSGVTAKNLSKPGAXAKPTAVKTFLKGTLVCLSGNNFTPMTKINIPQINQVRIAVNP
Ga0211558_103213841	3300020439	Marine	MNVIDRKAIIRKDKNTIPNDFKLDFKFKICFVEIIRDAKIQNXVRKIIGRTKSGVTAKNLIKPGAXAYPTAIKIFLKGTLLP
Ga0211558_105290183	3300020439	Marine	MNVIERKAIIRNDKNTIPKDFKLDFKFNICLVDIIREAKIQNCVRKIIGKTKSGVTAKNLIRPGAXAYPTAIKTFLNGTLLPL
Ga0211559_103706851	3300020442	Marine	LIGIVSILLITKEIDKKAMIKKDKNTIPNDLMFDLRFKICFVDIIKAAKIQNXVKKIIGIISSGVTAKNLNNPGAWANPTAVKTFLNDTLVCLSGNSFT
Ga0211564_104220191	3300020445	Marine	LTGSIFILLITKEIDKKAIIKKDKNTIPKDLKFDLRFRTCFVDIIRAAKIQNXVKKIIGIIKSGVTAKNLSKPGAXANPTAVKTFLKGILICLSGNSFTPITYINSAQTN
Ga0211638_101574281	3300020448	Marine	MXLIGKAFILLITKDIDKKAIIKKDKNTIPKDLKFDLRFNICLVDIIKAAKIQNWVKKIIGIIKSGVTAKNLKSPGAXAKPTAVSTFLKGTLVCLSGNIFTPITNIKIAQINQVSIAVSPDI
Ga0211473_103901811	3300020451	Marine	MTKDIDKKAIIKKDKKTIPKDFIFDLSPRICFVDIIKAAKIQNXVKKIIGIIKSGVTAKNLIKPGACAKPTAVKTFLNETLVCLSGNSFTPI
Ga0211473_106828033	3300020451	Marine	MXLTGITFILLITKEIDKKAIIKKDKKTIPKDLKFDLRFKTCFVEIIKAAKIQNXVKKIIGIIKLGVTAKNLNKPGAXAKPTAVKTFLK
Ga0211548_105837832	3300020454	Marine	MDKNTIIKKDKNTIPNDFKLDFKLRVCFVDIIKAAKIQNXVRKIIGIINSGVIAKNLIKPGAXAKPTAVKIFLNGIFVCLSGKSLTPITYMNMPQTNHVIIAVSP
Ga0211664_101752973	3300020455	Marine	MXLTGKAFILLITNEIDKKTIIKNDKKTIPKDLIFDLRFRISLVEIINAAKIQNCVKKIIGIINSGVKAKNLSKPGAXAKPTAVKTFLKETFVCFSGKSFTP
Ga0211551_106171691	3300020456	Marine	VLTGKESNLLITKDIDMKAIIKNDKITTPKALKFDFRFNVCLVAIINPANIQNXVIKIIGINKSGVTAKNLNIPGAXAYPTLIKTFLKGTLVSLSGNNL
Ga0211643_103886401	3300020457	Marine	MXLIGIAFIRLITKEIDKKAIIKKDKKTIPNDLKFDLRFNICLVEIIRAAKIQNCVKKIIGIIKSGVTAKNLNRPGAWAKPTAVKTFLKGTFVCLSGKSFTPITKMNIAQIN
Ga0211535_103062231	3300020461	Marine	MXLTGSTFILLITKEIDKKTINKKDKNTIPKDLKLDFRFKICLVAIINPANIQNCVKKIIGTINSGVIAKNLNNPGAWANPIAVKTFLKV
Ga0211676_105200963	3300020463	Marine	LIGKASILLITKEIDKKTIIKNDKKTIPNDLKLDLRFKICFVDIISAANIQNXVKKIIGIINSGVTAKNLNIPGACANPTAVNTFLKET
Ga0211640_102797422	3300020465	Marine	VLIGIASILLITNDIDRNAIIRKDKKIIPKDLKLDFILSICLVAIINDAKIQNCVIKMIGITSSGTTAKNLINPGACAYPTPINIFLNDTLVSLSGKSFT
Ga0211640_106318091	3300020465	Marine	VSILLMTNEIDKNIIIKNERKTIPNDFKLDLRFKICLVDKIKAAKIQNXVKKIIGIINSGVTAKNLNNPGACAKPTAVRTFLNETLVCL
Ga0211714_104832383	3300020466	Marine	MAFILLITKVIDKKAIIKKDKNTIPKDFKFDLRFKICFVDIINAAKIQNXVKKIIGIISSGVTAKNLNKPGACANPTAVKTFLKDTFVCLSGNNFTPITKIKIAQ
Ga0211547_104269493	3300020474	Marine	MXLIGIVFILLITKDIDKKAIIKKDKKTIPKDFKFDLKLRICLVEIIKAAKIQNXVKKIIGIIKSGVTAKNLNKPGAWAKPTAVKTFLNGTFVCLSGNSFTPITNINIAHIN
Ga0211541_103880723	3300020475	Marine	MXLIGIAFILLITKEIDKKAIIKKDRKTIPKDLKFDLRFNICLVEIIKAAKIQNCVKKIIGIIKSGVTAKNLNKPGAXAKPTAVRTFLKG
Ga0211503_104064853	3300020478	Marine	MNVIERKAIIRKDKNTTPKDFKLDFKFNICFVDIIKEANIQNCVRKIIGKTKSGVTAKNLIKPGAXAYPTAINTFLNGTLLPLSGKIFTPIT
Ga0213862_103225011	3300021347	Seawater	MTNDIDKNAIIKKDKKTIPNDLKFDFKFKICLVAIINAAKIQNXVRNIIGTINSGVTAKNLINPGAXAKPTAVKTFLKGTFVCLSGKILTPIT
Ga0206681_102655533	3300021443	Seawater	MGRASILLITNEIDKNAIIKKDKNTIPKALKLDFKFRICFVAIINDAKIQNXVKNTIGITKSGVTAKNLNKPGAXAYPTAISIFLNVTLVSLSENNLT
Ga0224906_11232232	3300022074	Seawater	MXLTGNTFILLMTKEIDKKAIIKKDKNTIPNDLKFDLRFKTCFVEIISPAKIQNXVKKIIGIIKLGVTAKNLSKPGAXAKPTAVKTFLNGTLL
Ga0222652_10591182	3300022853	Saline Water	MLLIGRAFILLITKDIERKAIIKKAKKTIPNDLKLDFKFKTSFVEIIKLANIQNXVRNIIGIIKSGVTAKNLKRPGAXANPTAVKTFLNGTLLSLS
(restricted) Ga0233432_103116263	3300023109	Seawater	MGRAFILLITNDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNXVRNIIGIIKSGVTAKNLKSPGAXANPTAVKTFLNGTLVSLSGNNFTPIT
Ga0255743_104248721	3300023110	Salt Marsh	MTNDIDKNAIIKKDKKTIPNDLKFDFKFKICFVAIINAAKIQNXVRNIIGTINSGVTAKNLINPGAXAKPTAVKTFLKGTFVCLSGKILTPIT
Ga0255759_105914901	3300023178	Salt Marsh	MDKKAIIKKDKNTIPKDLKFDLRFKICFVDIIKAAKIQNCVKKIIGIINSGVTAKNLISPGAXANPTAVKTFLNDTFVCLSGNNFTPITKINIAHTNQVRIA
Ga0228636_11164691	3300024191	Seawater	MXLIGSAFILLITNEIDKNAIIKKDKNTIPKDFKFDFRFKTCFVDIIKAAKIQNXVKKIIGIIKSGVTAKNLSKPGAXAKPTAVKT
Ga0228658_11703632	3300024297	Seawater	MGSAFILLITNEIDKNAIIKKDKNTIPKDFKFDFRFKTCFVDIIKAAKIQNXVKKIIGIIKSGVTAKNLSKPGAXAKPTAVKTFLKGTLVCLSGNNFTPITKINTPQI
Ga0228670_11088613	3300024319	Seawater	MXLIGSAFILLITNEIDKNAIIKKDKNTIPKDLKFDFRFKTCFVDIIKAAKIQNXVKKIIGIIKSGVTAKNLSKPGAXAKPTAVKTFLKGTLVCL
Ga0209494_11875041	3300025673	Methane Seep Mesocosm	MGSAFILLITKVIDKKAIIKKDKKTIPKDFIFDFKLKICFVDIINPAKIQNXVRKMIGIIKSGVTAKNLSNPGEXAYPTAIKIFLNGTLVSLSGNNLTPITK
Ga0209505_11843632	3300025690	Pelagic Marine	LTGRTFILLITKEIDKKAIIKKDKNTIPKDLKFDLRFKTCFVDIIKAAKIQNXVRKIIGTIKPGVTAKNLNRPGAXAKPTAVNTFLKGILVCLSGNNLTPMTN
Ga0209715_10849053	3300025699	Pelagic Marine	NDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNXVKNIIGIIKSGVTAKNLKSPGAXANPTAVNTFLNETFCFFIWK
Ga0209362_12439123	3300025770	Marine	MGSIFILLITKEIDKNAIIKNDKNTIPKDLILDFKPSTCFVEIINPAKIQNCVRNIIGIIIFGVTAKNLNKPGAXAKPTAVNTFLKGTFV
Ga0209832_11465791	3300025830	Pelagic Marine	MXLIGSAFILLITNEIDKNAIIKKDKNTIPKDFKFDFRFKTCFVDIIKAAKIQNXVKKIIGIIKSGVTAKNLSKPGAXAKPTAVKTFLKGTLVCLS
Ga0209308_103857521	3300025869	Pelagic Marine	MRLITKEIDKKTIIKNDKNIIPKDLKFDLMFKTCFVDIINAAKIQNCVIKIIGIIKSGVIAKNLKRPGACAKPTAVNTFLKDTLTCLSGNNLTPTTKTSIAQTN
Ga0209308_104062551	3300025869	Pelagic Marine	MXLIGSVFILLITNEIDKNAIIKKDKNTIPKDLKFDFRFKTCFVDIIKAAKIQNXVKKIIGIIKSGVTAKNLSKPGAXAKPTAVKTFLKGTLVCLSGNNFTPMTKINIPQINQVRIAVNP
Ga0209630_103351671	3300025892	Pelagic Marine	MXLTGNTSILLITKEIDKKAIIKKDKNTIPKDLKFDLRFKTCFVDIIKEAKIQNXVKKIIGIIKSGVTAKNLNNPGAXAKPTAVKTFLKGTFVCLSGNNFTPITKINIAQINH
Ga0208624_11206861	3300026093	Marine	MAFILLITKVIDKKAIIKKDKNTIPKDFKFDLRFKICFVDIINAAKIQNXVKKIIGIISSGVTAKNLNKPGACANPTAVRTFLKDTLVCLSGNN
Ga0208959_10267143	3300027062	Marine	MGRAFILLITKVIDKKAIIKKDKKTIPKDFIFDFKLKICFVDIINPAKIQNXVRKMIGIIKSGVTAKNLSNPGEXAYPTAIKIFLNGTLVSLSGNNLT
Ga0208963_10567341	3300027170	Marine	MGRAFILLITNDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNXVKNIIGIIKSGVTAKNLKSPGAXANPTAVNTFLNGT
Ga0208437_11407603	3300027525	Estuarine	MGRAFILLITNDIERKAIIKKAKKTIPKDLKLDFRFKTCFVEMINPANIQNXVKNIIGIIKSGVTAKNLKSPGAXANPTAVKTFLNET
Ga0209710_11955913	3300027687	Marine	MGRAFILLITKDIDKNAIIKKDKKTIPNDLKLDFKFKICFVEIINPANIQNXVKKIIGIIKSGVTAKNLSKPGAXAKPTPINIFLNGTLLSLSG
Ga0209710_12484663	3300027687	Marine	MGRAFILLITKDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNXVSNIIGIIKSGVTAKNLNKPGAXANPTAVKTFLNETLVSLSGN
Ga0209036_11084181	3300027702	Marine	MDKNAIIRKDKNTIPKDLKLDLRFKTCFVDIIKAAKIQNXVKKIIGIIKSGVTAKNLNNPGAXAKPTAVKTFLNDTLDCLSGNSFTPITKMKIAHINQV
Ga0209192_102729781	3300027752	Marine	LLITNDIERKAIIKKAKKTIPKDLKLDFRFKTCFVEMIKLANIQNXVRNIIGIIKSGVTAKNLKSPGAXANPTAVNTFLNETFVS
Ga0209709_102624351	3300027779	Marine	MGRAFILLITKDIDKNAIIKKDKKTIPNDLKLDFKFKICFVEIINPANIQNXVKKIIGIIKSGVTAKNLSKPGAXAKPTPINIFLNGILLSLSGNSFTPTTNINRAQ
Ga0209502_102032933	3300027780	Marine	MGRAFILLITKDIDKNAIIKKDKKTIPNDLKLDFKFKICFVEIINPANIQNXVKKIIGIIKSGVTAKNLSKPGAXAKPTPINIFLNGTLLSLSGN
Ga0209502_104318651	3300027780	Marine	MGRAFILLITKDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNXVRNIIGIIKSGVTAKNLNKPGAXANPTAVNTFLNGTFVSLSGNNFTPIT
Ga0209830_101964621	3300027791	Marine	MTKDIERKAIIKNDKKTTPNDLKLDFKFKTCFVQIIRLANIQNXVRNIIGIIKSGVTAKNLKRPGAXANPTAVNTFLKETLLSLSGNIFTPIT
Ga0209091_102957623	3300027801	Marine	MKDIERKAIIKKAKKTIPNDLKLDFKFKTCFVEMIKLANIQNXVRNIIGIIKSGVTAKNLKSPGAXANPTAVKTFLNGTLV
Ga0233397_11486681	3300028111	Seawater	MGRAFILLITKDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNXVRNIIGIIKSGVTAKNLKSPGAXANPTAVKTFLNEPLVSLSGNNFTPIT
Ga0257114_11915963	3300028196	Marine	LLITKDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNXVKNIIGIIKSGVTAKNLKSPGAXANPTAVNTFLNETFVSLSGNNFT
Ga0257110_11618643	3300028197	Marine	MGKAFILLITKDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNXVKNIIGIIKSGVTAKNLKSPGAXANPTAVNTFLNETLVSLSGNNFTPIT
Ga0308022_12166291	3300031142	Marine	MGKVSIXLITNDIDIKAIIKNDKNTIPNDLKLDFKPKICFVEIIKPANIQSXVKNIIGIIKSGVTAKNLMRPGEWAKPTAIKIFLKGTFVSLSGNSFTPTTNI
Ga0308025_12926291	3300031143	Marine	MTKDIERKAIIKKDKKTTPNDLKLDFKFKICFVQIIKLANIQNXVRNIIGIIKSGVTAKNLIRPGAXAKPTAVNTFLNGTFVSLSGNIFTPIT
Ga0307488_107834673	3300031519	Sackhole Brine	LLIGRTFILLTTKDIDKKAIIKKAKKTIPNDLKLDFKFKTCFVEMINPANIQNXVRNIIGIIKSGVTAKNLKRPGAXANPTAVKTFLN
Ga0307488_108331501	3300031519	Sackhole Brine	MGRAFILLITKDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNXVRNIIGIIKSGVTAKNLKSPGAXANPTAVKTFLNGTLVSLSGNNFTPIT
Ga0308007_102371672	3300031599	Marine	MGKVSIXLITNDIDIKAIIKNDKNTIPNDLKLDFKPKICFVEIIKPANIQSXVKNIIGIIKSGVTAKNLMRPGEWAKPTAIKTFLKGTFISLSGKSFTPTTNINKAQTNQVR
Ga0308004_103372923	3300031630	Marine	MGRAFILLITKDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEIINPANIQNXVKNIIGIIKSGVTAKNLKSPGAXANPTAVNTFLNET
Ga0307986_104398341	3300031659	Marine	MLLIVKLSIXLITKDIDIKAIIKKDKNTTPNDLKLDFKFKICFVEIIKPANIQSXVKNIIGIIKFGVTAKNLRRPGECAKPTAIKTFLN
Ga0302122_102795971	3300031675	Marine	MGKAFILLITKDIERKAIIRKAKKTIPNDLKLDFKFKTSFVEIIKLANIQNXVRNIIGIIKSGVTAKNLNKPGAXAKPTAVNTFLNETLVSLSGNNFTPIT
Ga0308013_102775953	3300031721	Marine	LPIGRAFILLMIKDIDKNAIIKKAKKTIPNDLKLDFKFKTCFVEIIKLANIQNXVRNIIGIIKSGVTAKNLNRPGAXAKPTAVNTFLNGAF
Ga0308013_102971141	3300031721	Marine	LLIGRAFILLITKDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMIKPANIQNXVINIIGIIKSGVTAKNLKSPGAWANPTAVSTFLNGTLVSLSGN
Ga0315332_109566903	3300031773	Seawater	MDKKAIIRKDKKTIPKDLRLDLRFNICLVEIIRAAKIQNXVKKIIGIIKSGVTAKNLNKPGAXAKPTAVRTFLKETFV
Ga0315331_111933191	3300031774	Seawater	MFILLITNDIDRKAIIKKDKSTIPKDLKLDLRFNICLVEIINPAKIQNXVRKIIGIIKSGVTAKNLNNPGAXANPTAVKTFLKETLVCLSGN
Ga0315316_107508291	3300032011	Seawater	MGRAFILLITKDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNXVKNIIGIIKSGVTAKNLKSPGAXANPIAVKTFLNGTLVSLSGNNFTPIT
Ga0315316_115930651	3300032011	Seawater	MGRAFILLITKVIDKKAIIRKDKKTIPKDFIFDFKLKICFVDIINPAKIQNXVRKMIGIIKSGVTAKNLNNPGEXAYPTAIKIFLNGTLVSLSGNNLTPTTKINND
Ga0315315_110617991	3300032073	Seawater	MIKKDKNTIPKDLKFDLRFKICFVDIIKPAKIQNXVRKIIGTIKSGVTAKNLNSPGAXAKPTAVNTFLKGTLVCLSGNNLAPITNIKTAQTNQVIIAVNPDIATAV
Ga0310345_123060522	3300032278	Seawater	MGRAFILLITKVIDKKAIIRKDKKTIPKDFIFDFKLKICFVDIINPAKIQNXVRKMIGIIKSGVTAKNLNNPGEXAYPTAIKIFLNGTLVSLSGNNLTPTTKINNAQINQVTIAVN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters