Metagenome / Metatranscriptome Family F052173

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052173
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	60 residues
Representative Sequence	MDTIFVDEALQAYREKTGDMRPFEALPVAVTSQILREAQRLKGFRCGRFSQPAAAEGCVE
Number of Associated Samples	106
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.29 %
% of genes near scaffold ends (potentially truncated)	27.97 %
% of genes from short scaffolds (< 2000 bps)	72.03 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.818 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.566 % of family members)
Environment Ontology (ENVO)	Unclassified (38.462 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (74.825 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.32% β-sheet: 0.00% Coil/Unstructured: 55.68%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF00498	FHA	12.59
PF08494	DEAD_assoc	9.09
PF13492	GAF_3	6.99
PF16697	Yop-YscD_cpl	2.80
PF01551	Peptidase_M23	2.10
PF08282	Hydrolase_3	1.40
PF13579	Glyco_trans_4_4	1.40
PF13442	Cytochrome_CBB3	0.70
PF11964	SpoIIAA-like	0.70
PF13229	Beta_helix	0.70
PF13185	GAF_2	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG1201	Lhr-like helicase	Replication, recombination and repair [L]	9.09
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	1.40
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	1.40
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	1.40
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	1.40
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	1.40

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.82 %
Unclassified	root	N/A	18.18 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.82 %
Unclassified	root	N/A	18.18 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.82 %
Unclassified	root	N/A	18.18 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	64.34 %
Unclassified	root	N/A	18.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	54.55 %
Unclassified	root	N/A	18.18 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.55 %
Unclassified	root	N/A	18.18 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	9.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.55 %
Unclassified	root	N/A	18.18 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.55 %
Unclassified	root	N/A	18.18 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.55 %
Unclassified	root	N/A	18.18 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10243498	Not Available	675	Open in IMG/M
3300001593\|JGI12635J15846_10227640	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1212	Open in IMG/M
3300003219\|JGI26341J46601_10118981	Not Available	757	Open in IMG/M
3300003505\|JGIcombinedJ51221_10283763	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300004080\|Ga0062385_10548345	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300004080\|Ga0062385_10881010	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300004091\|Ga0062387_100349504	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300004091\|Ga0062387_100357780	Not Available	966	Open in IMG/M
3300004092\|Ga0062389_102867639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300004092\|Ga0062389_103397210	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300004103\|Ga0058903_1000040	Not Available	609	Open in IMG/M
3300004103\|Ga0058903_1523736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300004119\|Ga0058887_1434911	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300004119\|Ga0058887_1448358	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300004121\|Ga0058882_1751288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300004471\|Ga0068965_1179925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	801	Open in IMG/M
3300004965\|Ga0072321_1159619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300005534\|Ga0070735_10103337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1794	Open in IMG/M
3300005538\|Ga0070731_10618050	Not Available	721	Open in IMG/M
3300005591\|Ga0070761_10107459	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1613	Open in IMG/M
3300005602\|Ga0070762_10010114	All Organisms → cellular organisms → Bacteria	4719	Open in IMG/M
3300005602\|Ga0070762_10108472	Not Available	1616	Open in IMG/M
3300005610\|Ga0070763_10005270	All Organisms → cellular organisms → Bacteria	4970	Open in IMG/M
3300005712\|Ga0070764_10024475	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3016	Open in IMG/M
3300005921\|Ga0070766_10416506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	882	Open in IMG/M
3300006059\|Ga0075017_101362140	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300006172\|Ga0075018_10308315	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300006176\|Ga0070765_100002659	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11273	Open in IMG/M
3300006176\|Ga0070765_100150538	All Organisms → cellular organisms → Bacteria → Proteobacteria	2075	Open in IMG/M
3300006893\|Ga0073928_10007439	All Organisms → cellular organisms → Bacteria	14198	Open in IMG/M
3300006893\|Ga0073928_10140914	All Organisms → cellular organisms → Bacteria	1957	Open in IMG/M
3300006893\|Ga0073928_10592684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300009522\|Ga0116218_1054852	Not Available	1808	Open in IMG/M
3300009524\|Ga0116225_1440526	Not Available	579	Open in IMG/M
3300009700\|Ga0116217_10355716	Not Available	934	Open in IMG/M
3300009824\|Ga0116219_10528094	Not Available	651	Open in IMG/M
3300010343\|Ga0074044_10015768	All Organisms → cellular organisms → Bacteria	5563	Open in IMG/M
3300010379\|Ga0136449_100080793	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6860	Open in IMG/M
3300010379\|Ga0136449_100334287	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2734	Open in IMG/M
3300011120\|Ga0150983_10346862	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	896	Open in IMG/M
3300011120\|Ga0150983_15548254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300011411\|Ga0153933_1019240	Not Available	1662	Open in IMG/M
3300014495\|Ga0182015_10003209	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	18598	Open in IMG/M
3300014501\|Ga0182024_10060591	Not Available	5848	Open in IMG/M
3300014501\|Ga0182024_10128399	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3610	Open in IMG/M
3300017932\|Ga0187814_10104354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1047	Open in IMG/M
3300017933\|Ga0187801_10216509	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300017942\|Ga0187808_10469656	Not Available	580	Open in IMG/M
3300017943\|Ga0187819_10004668	All Organisms → cellular organisms → Bacteria	7466	Open in IMG/M
3300017948\|Ga0187847_10161303	All Organisms → cellular organisms → Bacteria → Acidobacteria	1225	Open in IMG/M
3300017988\|Ga0181520_10147854	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1916	Open in IMG/M
3300017995\|Ga0187816_10092551	Not Available	1294	Open in IMG/M
3300017995\|Ga0187816_10115341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1156	Open in IMG/M
3300017995\|Ga0187816_10559537	Not Available	515	Open in IMG/M
3300018001\|Ga0187815_10386737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300018006\|Ga0187804_10268201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300018013\|Ga0187873_1233926	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300018022\|Ga0187864_10050698	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2331	Open in IMG/M
3300018046\|Ga0187851_10020184	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4676	Open in IMG/M
3300019258\|Ga0181504_1124040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300020579\|Ga0210407_10132667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1911	Open in IMG/M
3300020579\|Ga0210407_10190233	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1593	Open in IMG/M
3300020580\|Ga0210403_10781455	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300020581\|Ga0210399_10027208	All Organisms → cellular organisms → Bacteria	4560	Open in IMG/M
3300020582\|Ga0210395_10047407	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3146	Open in IMG/M
3300020582\|Ga0210395_10228769	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1396	Open in IMG/M
3300020582\|Ga0210395_11338531	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300020583\|Ga0210401_10090278	All Organisms → cellular organisms → Bacteria	2881	Open in IMG/M
3300021170\|Ga0210400_10274789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1381	Open in IMG/M
3300021171\|Ga0210405_10388364	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1100	Open in IMG/M
3300021171\|Ga0210405_11070712	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300021178\|Ga0210408_11127165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300021180\|Ga0210396_10068453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3233	Open in IMG/M
3300021181\|Ga0210388_10717693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	870	Open in IMG/M
3300021401\|Ga0210393_10006537	All Organisms → cellular organisms → Bacteria	9163	Open in IMG/M
3300021401\|Ga0210393_10867438	Not Available	733	Open in IMG/M
3300021403\|Ga0210397_10154223	Not Available	1608	Open in IMG/M
3300021404\|Ga0210389_10415624	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1058	Open in IMG/M
3300021405\|Ga0210387_10058428	All Organisms → cellular organisms → Bacteria	3124	Open in IMG/M
3300021405\|Ga0210387_10419263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1187	Open in IMG/M
3300021406\|Ga0210386_11821284	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300021407\|Ga0210383_10052159	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3408	Open in IMG/M
3300021407\|Ga0210383_10654549	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	904	Open in IMG/M
3300021420\|Ga0210394_10188404	All Organisms → cellular organisms → Bacteria	1798	Open in IMG/M
3300021420\|Ga0210394_10210250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1697	Open in IMG/M
3300021432\|Ga0210384_10000066	All Organisms → cellular organisms → Bacteria	152110	Open in IMG/M
3300021432\|Ga0210384_10059063	Not Available	3467	Open in IMG/M
3300021433\|Ga0210391_10277437	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1315	Open in IMG/M
3300021433\|Ga0210391_11179810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300021475\|Ga0210392_10710357	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300021475\|Ga0210392_10780347	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300021477\|Ga0210398_11331509	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300021478\|Ga0210402_10006208	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10609	Open in IMG/M
3300021478\|Ga0210402_10102060	All Organisms → cellular organisms → Bacteria	2577	Open in IMG/M
3300021479\|Ga0210410_10036877	Not Available	4247	Open in IMG/M
3300021479\|Ga0210410_10113793	All Organisms → cellular organisms → Bacteria	2395	Open in IMG/M
3300022504\|Ga0242642_1091894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300022507\|Ga0222729_1063405	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300022510\|Ga0242652_1018934	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300022522\|Ga0242659_1061471	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300022528\|Ga0242669_1103784	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300022532\|Ga0242655_10168954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300022533\|Ga0242662_10304494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300022557\|Ga0212123_10046124	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4084	Open in IMG/M
3300022557\|Ga0212123_10138314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1902	Open in IMG/M
3300022717\|Ga0242661_1023260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1017	Open in IMG/M
3300022722\|Ga0242657_1156073	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300022724\|Ga0242665_10262372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300022724\|Ga0242665_10338831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300022881\|Ga0224545_1052077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300027567\|Ga0209115_1035506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1130	Open in IMG/M
3300027591\|Ga0209733_1135268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300027660\|Ga0209736_1182572	Not Available	549	Open in IMG/M
3300027767\|Ga0209655_10125582	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300027824\|Ga0209040_10047665	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2599	Open in IMG/M
3300027842\|Ga0209580_10327584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300027853\|Ga0209274_10079275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1597	Open in IMG/M
3300027855\|Ga0209693_10006536	All Organisms → cellular organisms → Bacteria	5356	Open in IMG/M
3300027879\|Ga0209169_10009555	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5461	Open in IMG/M
3300027884\|Ga0209275_10003353	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6620	Open in IMG/M
3300027884\|Ga0209275_10010396	All Organisms → cellular organisms → Bacteria	3971	Open in IMG/M
3300028906\|Ga0308309_10050155	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3003	Open in IMG/M
3300028906\|Ga0308309_10159515	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1823	Open in IMG/M
3300030494\|Ga0310037_10029473	Not Available	2640	Open in IMG/M
3300030494\|Ga0310037_10369370	Not Available	599	Open in IMG/M
3300030707\|Ga0310038_10251623	Not Available	817	Open in IMG/M
3300030738\|Ga0265462_11289448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300030759\|Ga0265745_1031087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300030862\|Ga0265753_1003408	All Organisms → cellular organisms → Bacteria	1648	Open in IMG/M
3300030888\|Ga0265769_100939	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300030888\|Ga0265769_123752	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300030940\|Ga0265740_1030295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300031017\|Ga0265744_109141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300031090\|Ga0265760_10000695	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	9590	Open in IMG/M
3300031090\|Ga0265760_10312782	Not Available	558	Open in IMG/M
3300031708\|Ga0310686_102271114	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	10399	Open in IMG/M
3300031708\|Ga0310686_113448952	Not Available	954	Open in IMG/M
3300031715\|Ga0307476_10274953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1233	Open in IMG/M
3300031715\|Ga0307476_10360697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1071	Open in IMG/M
3300031823\|Ga0307478_10268940	Not Available	1389	Open in IMG/M
3300032160\|Ga0311301_10086739	All Organisms → cellular organisms → Bacteria	6326	Open in IMG/M
3300032160\|Ga0311301_10195478	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3485	Open in IMG/M
3300033887\|Ga0334790_104770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	911	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.30%
Host-Associated	Host-Associated	0.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.62%
Aquatic	Environmental → Aquatic	21.68%
Fungi	Host-Associated → Fungi	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.22%
Freshwater	Environmental → Aquatic → Freshwater	16.78%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.50%
Sediment	Environmental → Aquatic → Sediment	1.40%
Peat	Environmental → Terrestrial → Peat	1.40%
Mycelium	Host-Associated → Fungi → Mycelium	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.55%
Loam	Environmental → Terrestrial → Soil → Loam	18.88%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.78%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.40%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.40%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.66%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	18.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.49%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.29%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.50%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.40%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.40%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.70%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.57%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	10.49%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	9.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.39%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.29%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.99%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.50%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.50%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.10%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.10%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.40%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.40%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.40%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.70%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.70%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.70%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004103	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF242 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004119	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF210 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004471	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 57 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004965	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 17 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011411	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ017 MetaG	Host-Associated	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300019258	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022510	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030759	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030888	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030940	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031017	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_102434981	3300001356	Peatlands Soil	MDTIFVDEALQAYREKTGDTRPFELLPVPVTSQILREAQRLKGFRSGSFSHPATADGCSEG*
JGI12635J15846_102276401	3300001593	Forest Soil	IRLPIFFAPNVMDTIFVDQALQAYRDKTGDLRPFEALPIQIASHILREAQRLKGFRNGRFSQPAAADGMDG*
JGI26341J46601_101189811	3300003219	Bog Forest Soil	MDTIFLETALQAYRDKTGDMRSWDSLPVAITSQILMDAQRLKGFRSKSFSQ
JGIcombinedJ51221_102837632	3300003505	Forest Soil	MDXIFVDXALQAYREKTGDMRPFELLPVAITSQILREAQRLKGFQSAGLNQPAAADRCGEP*
Ga0062385_105483452	3300004080	Bog Forest Soil	MDKIFVDEALQAYRDKTGDMRPWHLLPVAVTSQILMDAQRRKSCRHGKFPQPAAADGCVET*
Ga0062385_108810101	3300004080	Bog Forest Soil	LVNMDTIFVVQALQAYREKTGDTRPWELLPVGITSQILREAQRLKGRRRGKIPQPATADGCVDS*
Ga0062387_1003495042	3300004091	Bog Forest Soil	MDTIFVDQALQAYRDKTGDMRSLDSLPVEIVSQILSEAQRLKSFRSGKFSQPAAADGCIES*
Ga0062387_1003577801	3300004091	Bog Forest Soil	MDTIFVNEALQAYRDKTGDMRPWGSLPVEIASQILRDAQRIKSFRSRKFSQSAAADGCADG*
Ga0062389_1028676392	3300004092	Bog Forest Soil	FVVQALQAYREKTGDTRPWELLPVGITSQILREAQRLKGRRREKIPQPATADGCVDS*
Ga0062389_1033972102	3300004092	Bog Forest Soil	MDTIFVNQALEAYRETTGDVRPFEALPIEVTSRILREAQRLKGFGNGSFPQPAAADGCVDS*
Ga0058903_10000402	3300004103	Forest Soil	MDTIFVDQALQAYREKTGDTRPFELLPVAVTSQILRDAQRLKGSRKASFSEAATAEREC*
Ga0058903_15237362	3300004103	Forest Soil	MDKIFVDHALQAYREKTGDMRPFELLPVAITSQILREAQRLKGFQSAGLNQPAAADRCGEP*
Ga0058887_14349112	3300004119	Forest Soil	MDKIFVDEALRAYQDKTGDMRPWHLLPVALTSQILMDAQRRKSCRHGKFPQPAAADGCVES*
Ga0058887_14483582	3300004119	Forest Soil	MDTVFVDEELQTYREKTEDMRSWDSLPVAVTSQILMDAQRRKGFRSRRFSQPAAAEGAVEG*
Ga0058882_17512882	3300004121	Forest Soil	MDTIFVDQALQAYRDQTGDMRPFEVLPVEVTSTILREAQRLKGLGNGSFPQPAAAEGCVDG*
Ga0068965_11799252	3300004471	Peatlands Soil	MDTIFVDQALEAYRDRTGDMRPFELLPVAVTSQILRAAQRLKGFRSERFSQPAAADGCGEG*
Ga0072321_11596191	3300004965	Peatlands Soil	MDTIFVDQALEAYRDRTGDIRPFELLPVAVTSQILRAAQRLKGFRSERFSQPAAADGCGEG*
Ga0070735_101033372	3300005534	Surface Soil	MDKIFVDEALQTYREKTGDLRPFEVLPVAVTSQILRDAQRLKGFRVANVPQQEAADGWGES*
Ga0070731_106180502	3300005538	Surface Soil	MDKIFVDEALRAYQDKTGDMRPWHLLPVAVTSQILMDAQRRKSCRHGKFPQPAAADGCAES*
Ga0070761_101074592	3300005591	Soil	MDKIFVDEALQAYQDKTGDMRPWHLLPVAITSQILMDAQRRKSCRHEKFPQPAIADGCADG*
Ga0070762_100101142	3300005602	Soil	MDKIFVDEALRAYRDKTGDMRPWHLLPVAVTSQILMDAQRRKSCRHGKFPQPATADGCADS*
Ga0070762_101084721	3300005602	Soil	LHGNMDKIFVDAALQAYRDKTGDMRPWHLLPVALTSQILMDAQRRKSCHHGKFPQPAAADGCIDG*
Ga0070763_100052702	3300005610	Soil	MDKIFVDAALQAYRDKTGDMRPWHLLPVALTSQILMDAQRRKSCHHGKFPQPAAADGCIDG*
Ga0070764_100244752	3300005712	Soil	MDTIFVDQALQAYREETGDLRPFEALPVEITSRILREAQRLKGSGNGSFPQPATADGCVDS*
Ga0070766_104165062	3300005921	Soil	MDTIFVDQALRAYRDKTGDMRPFEALPVEVTSKILREAQRLKGFGNGSFPQPAAADGCVDS*
Ga0075017_1013621402	3300006059	Watersheds	AYRDKTGDMRPWESLPVAVTSQILREAQRLKTFRDMTLSQPTAADGCVDS*
Ga0075018_103083151	3300006172	Watersheds	MDKIFVDEALQAYQDKTGDMRPWHLLPVAITSQILMDAQRRKSCHHGKFPQP
Ga0070765_1000026592	3300006176	Soil	MDTIFVDEALQAYREETGDMRPFETLPVLVTSQILREAQRLKGARSGRRSPPLVADEAAECEG*
Ga0070765_1001505382	3300006176	Soil	MDKIFVDEALQAYQDKTGDMRPWHLLPVAITSQILMDAQRRKTCRHGKFPQPATADGCAES*
Ga0073928_100074399	3300006893	Iron-Sulfur Acid Spring	MDTIFVDQALQAYREKTGDMRPFEVLPVAVTSQILRAAQRLKGFRSARVAQPTAVDEAPDLDR*
Ga0073928_101409142	3300006893	Iron-Sulfur Acid Spring	MDKIFVDEALQAYREKTGDMRPFELLPVAITSQILREAQRLKGFQSAGPSQSAAADRCGEP*
Ga0073928_105926841	3300006893	Iron-Sulfur Acid Spring	PTMDKIFVDEALQAYREKTGDMRPFELLPVAITSQILREAQRLKGYRKGSFSEPATAEKEC*
Ga0116218_10548522	3300009522	Peatlands Soil	MDTIFVDEALQAYREKTGDMRPFEALPVPVTSQILREAQRLKGFRNARFSQPATADGCGEG*
Ga0116225_14405261	3300009524	Peatlands Soil	MDKIFVDEALQAYREKTGDMRRFELLPVPITSLILREAQRLKGFPSGRTSQPMTVNMAAKGEG*
Ga0116217_103557161	3300009700	Peatlands Soil	MDTIFVDEALQAYREKTGDTRPFELLPVPVTSQILREAQRLKGFRSGRVDQPATANRAAEREG*
Ga0116219_105280941	3300009824	Peatlands Soil	MDTIFVDEALQAYREKTGDTRPFELLPVPVTSQILREAQRLKGFRGARVAQPTAVDEAAEREG*
Ga0074044_100157686	3300010343	Bog Forest Soil	MDKIFVDEALQAYRDKTGDMRPFELLPVPITSQILREAQRLKGFRSASFSQPATADGSGDR*
Ga0136449_1000807932	3300010379	Peatlands Soil	MDTIFVDEALQAYRDKTGDTRPFELLPVAVTSQILREAQRIKGVRCGKFSQPAAADG*
Ga0136449_1003342873	3300010379	Peatlands Soil	EALQAYREKTGDTRPFELLPVPVTSQILREAQRLKGFRSGRVDQPATANRAAEREG*
Ga0150983_103468622	3300011120	Forest Soil	MDTIFVDEALQAYRDKTGDMRPFEALPVLVTSQILREAQRLKGFRSGRLSQPATAESCGDS*
Ga0150983_155482541	3300011120	Forest Soil	MDTIFVDEALQAYRDKTGDMRPFEVLPVLVTSQILREAQRLKGSRSGRRSSPVVADEAAECEG*
Ga0153933_10192402	3300011411	Attine Ant Fungus Gardens	MDTIFVDQALQAYREKTGDMRPFELLPVAITSQILREAQQLKGSRKGSFSEPATAETEC*
Ga0182015_100032094	3300014495	Palsa	MDKIFVDQALQAYREKTGDMRPFESLPVAITSQILREAQRLKGFRSQALNQSAAADGCGET*
Ga0182024_100605911	3300014501	Permafrost	MDKIFVDQALQAYREKTGDMRPFELLPVAVTSQILREAQRLKGFRKGSFSEPATAEKEC*
Ga0182024_101283994	3300014501	Permafrost	MDKIFVDEAIEAYREKTGDMRPFELLPVAVTSQILREAQRLKGSRKGSLSEPATAEKEC*
Ga0187814_101043542	3300017932	Freshwater Sediment	MDKIFVDEALRAYQDKTGDMRPWHLLPVSVTSQILMDAQRRKSCRHGKFPQP
Ga0187801_102165092	3300017933	Freshwater Sediment	MDKIFVDEALRAYQDKTGDMRPWHLLPVAVTSQILMDAQRRKSCRHGKFPQPATADGCAD
Ga0187808_104696561	3300017942	Freshwater Sediment	MDKIFVDEALRAYQDKTGDMRPWHLLPVSVTSQILMDAQRRKSCRHGKFP
Ga0187819_100046685	3300017943	Freshwater Sediment	MDTIFVDEALQAYRDKTRDVRPFEVLPVAITSEILREAQRLKRSQGVSLSQTAAADGCGD
Ga0187847_101613032	3300017948	Peatland	MDTIFVDQALRAYREKTGDLRPFEALPVEITSKILREAQRLKGFGNGSFPQPAAADGWVD
Ga0181520_101478542	3300017988	Bog	SRFFLRANMDTIFVDQALQAYRDQTGDMRPFEVLPVEVTSTILREAQRLKGLGNGSFPQPAAAEGCVDG
Ga0187816_100925512	3300017995	Freshwater Sediment	MDKIFVDEALQAYRDKTGDMRPFELLPVPITSQILREAQRLKGSRSGSHSHSAAADPCAN
Ga0187816_101153412	3300017995	Freshwater Sediment	MDKIFVDEALRAYRDKTGDMRPWHLLPVAVTSQILMDAQRRKSCRHGKFPQPAAADGCAE
Ga0187816_105595371	3300017995	Freshwater Sediment	MDTIFVDEALQAYRDKTGDMRSWELLPVAVTSQILMDAQRLKGLRSGRLLQPATAEGGVE
Ga0187815_103867371	3300018001	Freshwater Sediment	LPIFLFGLTMDTIFVDEALQAYREKTGDMRPFELLPVPITSQILREAQRLKGFRSARFPQPATADGCDEG
Ga0187804_102682012	3300018006	Freshwater Sediment	MDTIFVDEALQAYRDKTRDVRPFEVLPVAITSEILREAQRLKRSQGVSLSQTAAA
Ga0187873_12339262	3300018013	Peatland	MDTIFVDQALQAYRDQTGDMRPFEVLPVEVTSTILREAQRLKGLGNGSFPQPAAAEGCVD
Ga0187864_100506983	3300018022	Peatland	MDTIFVDQALQAYRDKTGDMRPFESLPVAVTGQILRDAQRLKGFRSGGISQPTAADGCVE
Ga0187851_100201842	3300018046	Peatland	MDTIFVDQALQAYRDQTGDMRPFEVLPVEVTSTILREAQRLKGLGNGSFPQPAAADGCVD
Ga0181504_11240402	3300019258	Peatland	MDTIFVDQALQAYRDQTGDMRPFEVLPVEVTSKILREAQRLKGLGNGSFPQPAAAEGCVD
Ga0210407_101326672	3300020579	Soil	MDKIFVDEALQAYRDKTGDMRPWHLLPVAVTSQVLMDAQRRKSFRRENFPQPAAADGCVD
Ga0210407_101902331	3300020579	Soil	QNMDTIFVDEALQAYREKTGDMRSWESLPVEVTSQILMDAQRLKGFRSGRFSQPAAAEGGVES
Ga0210403_107814551	3300020580	Soil	MDTIFVDQALQAYRDETGDLRPFEALPVEITSRILREAQRLKGSGNGSFPQPAAADGCVD
Ga0210399_100272084	3300020581	Soil	MDKIFVDEALRAYQDKTGDMRPWHLLPVAVTSQILMDAQRRKSCRHGKFPQPAAADGCAD
Ga0210395_100474072	3300020582	Soil	MDKIFVDEALQAYQDKTGDMRPWHLLPVAITSQILMDAQRRKSCRHGKFPQPATADGCAE
Ga0210395_102287692	3300020582	Soil	MDKIFVDEALQAYRDRTGDMRPFELLPVAVTSQILRDAQQLKGVRCGKFSQPAAADGWAD
Ga0210395_113385312	3300020582	Soil	FSLRSSRILLPVNMDTIFVDEALQAYREKTGDTRPFELLPVAVTSQILRDAQQLKGVRRGRFSQPAAADGCVDS
Ga0210401_100902781	3300020583	Soil	DSRFFSSLHGNMDKIFVDEALQAYRDKTGDLRPWHLLPVAVTSHILMDAQRRKSCRHGKFPQPAAADGCVES
Ga0210400_102747891	3300021170	Soil	MDKIFVDEALQAYRDKTGDMRPWHLLPVAVTSQVLMDAQRRKSFRRENFPQPAPAAGGVA
Ga0210405_103883641	3300021171	Soil	MDTIFVDEALQAYREKTGDMRPFDALPVEVTSQILREAQRLKGFRSASFSQPAATDGCVD
Ga0210405_110707122	3300021171	Soil	MDKIFVDEAIEAYREKTGDMRPFELLPVAVTSQILREAQRLKGFRSGRADQTAAADSCGE
Ga0210408_111271652	3300021178	Soil	MDKIFVDEALQAYRDKTGDLRPWHLLPVAVTSHILMDAQRRKSCSHGKFPQPAAADGCVE
Ga0210396_100684532	3300021180	Soil	MDTVFVDQALQAYREKTGDIRPFEALPLAVTSHILREAQRLKGFRSESFSQPAAADGCSD
Ga0210388_107176932	3300021181	Soil	MDTIFVDQALRAYRDKTGDMRPFEALPVEVTSKILREAQRLKGFGNGSFPQPAAADGCVE
Ga0210393_100065375	3300021401	Soil	VDQALRAYRDKTGDMRPFEALPVEVTSKILREAQRLKGFGNGSFPQPAAADGCVDS
Ga0210393_108674381	3300021401	Soil	MDTIFVDQALQAYRDKTGDMRSWETLPVAVTSQILRDAQRIKVFRRGKFSQLAAAEGCGE
Ga0210397_101542232	3300021403	Soil	MDKIFVDEALRAYQDKTGDMRPWHLLPVAITSQILMDAQRRKSCRHGKFPQPAT
Ga0210389_104156242	3300021404	Soil	MDKIFVDQALQAYREKTGDMRPFELLPVAITSQILREAQRLKGFQSAGLNQPAAADRCGE
Ga0210387_100584282	3300021405	Soil	MDKIFVDAALQAYRDKTGDMRPWHLLPVALTSQILIDAQRRKSCHHGKFPQPAAADGCVD
Ga0210387_104192632	3300021405	Soil	MDTIFVDQALQAYRDETGDLRPFEALPVEITSRILREAQRLKGSGNGSFPQPAAAD
Ga0210386_118212841	3300021406	Soil	MDKIFVDEALQAYRDKTGDLRPWHLLPVAVTSHILMDAQRRKSCRHGKFPQPAAADGCVE
Ga0210383_100521592	3300021407	Soil	MDKIFVDEALQAYRDKTGDLRPWHLLPVAVTSQILMDAQRRKSCRHEKFPQPAIADGCAD
Ga0210383_106545492	3300021407	Soil	MDTIFVDQALRAYRDKTGDMRPFEALPVEVTSKILREAQRLKGFGNGSFPQPAAADGCVD
Ga0210394_101884042	3300021420	Soil	MDTIFVDQALRAYRNKTGDMRPFEALPVEVTSKILREAQRLKGFGNGSFPQPAAADGCVE
Ga0210394_102102502	3300021420	Soil	MDKIFVDEALQAYREKTGDMRPFELLPVAVTSQILREAQRLKGFQSAGPSQSAAADRCGE
Ga0210384_1000006670	3300021432	Soil	VDEALQAYRDRTGDMRPFELLPVAVTSQILRDAQQLKGVRCGKFSQPAAADGWADG
Ga0210384_100590632	3300021432	Soil	VDEALQTYREKTGDMRSWDSLPVAVTSQILMDAQRRKGFRSTRFSQPAAAEGAVEG
Ga0210391_102774372	3300021433	Soil	MDTIFVDQALQAYRDKTGDLRPFEALPVEITSRILREAQRLKGSGNGSFPQPAAADGCVD
Ga0210391_111798101	3300021433	Soil	SSLHGNMDKIFVDEALQAYRDKTGDMRPWHLLPVAVTSQVLMDAQRRKSFRRENFPQPAAADGCVDS
Ga0210392_107103571	3300021475	Soil	EAYRAKTGDMRPWESLPVAVTSLILRDAQKLKTKRSRKFSQPATADGCAES
Ga0210392_107803472	3300021475	Soil	RFFCLLHGNMDKIFVDEALQAYRDSTGDMRPWQLLPVAVTSQILLDAQRRKSFRRGKFSQPTAAEGCVGS
Ga0210398_113315091	3300021477	Soil	LNMDTIFVEQALRAYRDKTGDMRPFEALPVEVTSKILREAQRLKGFGNGSFPQPAAADGCVDS
Ga0210402_100062081	3300021478	Soil	MDKIFVDEALRAYQDKTGDMRPWHLLPVAVTSQILMDAQRRKSCRHGKFPQPAAAD
Ga0210402_101020602	3300021478	Soil	RIKTGDMRPWHLLPVAVTSQILMDAQRRKSCRHGKFPQPAAADGCADG
Ga0210410_100368771	3300021479	Soil	SRFFSSLHGNMDKIFVDEALQAYRDKTGDLRPWHLLPVAVTSHILMDAQRRKSCRHGKFPQPAAADGCVES
Ga0210410_101137931	3300021479	Soil	DSRFFSSLHGNMDKIFVDEALQAYRDKTGDMRPWHLLPVAVTSQVLMDAQRRKSFRRENFPQPAAADGCVDS
Ga0242642_10918942	3300022504	Soil	ALRAYRDKTGDMRPWHLLPVAVTSQVLMDAQRRKSFRRENFPQPAAADGCVDS
Ga0222729_10634052	3300022507	Soil	FFSSLHGNMDKIFVDEALQAYRDKTGDMRPWHLLPVAVTSQVLMDAQRRKSFRRENFPQPAAADGCVDS
Ga0242652_10189342	3300022510	Soil	VDEALQTYREKTGDMRSWDSLPVAVTSQILMDAQRRKGFRSRRFSQPAAAEGAVEG
Ga0242659_10614712	3300022522	Soil	MDTIFVDEALQAYRDKTGDMRPFEVLPVLVTSQILREAQRLKGSRSGRRSSPVVADEAAECEG
Ga0242669_11037842	3300022528	Soil	MDEIFQDEALQAYRDKTGDMRPWHLLPVAVTSQVLMDAQRRKSFRRENFPQPAAADGCVD
Ga0242655_101689542	3300022532	Soil	MDKLFVDEAIQAYQEKTGDMRPFELLPVAITSQILREAQRLKGFRSRRVDQPAAADSCGE
Ga0242662_103044941	3300022533	Soil	MDTIFVDEALQAYRDKTGDVRPWESLPVAVTSQILMDAQRLKGFRSERFSQPAAAEGGVE
Ga0212123_100461243	3300022557	Iron-Sulfur Acid Spring	MDTIFVDQALQAYREKTGDMRPFEVLPVAVTSQILRAAQRLKGFRSARVAQPTAVDEAPDLDR
Ga0212123_101383142	3300022557	Iron-Sulfur Acid Spring	MDKIFVDEALQAYREKTGDMRPFELLPVAITSQILREAQRLKGFQSAGPSQSAAADRCGE
Ga0242661_10232602	3300022717	Soil	MDTIFVDEALQAYREKTGDMRPFEALPVAVTSQILREAQRLKGFRCGRFSQPAAAEGCVE
Ga0242657_11560732	3300022722	Soil	VDEALQAYREKTGDMRPFELLPVAVTSQILREAQRLKGFQSAGPSQSAAADRCGEP
Ga0242665_102623722	3300022724	Soil	MDKIFVDEALRAYQDKTGDMRPWHLLPVAVTSQILMDAQRRKSCRHGKFPQPAAADGCAE
Ga0242665_103388312	3300022724	Soil	MDTIFVDEALQAYRDKTGDLRPWHLLPVAVTSQILMDAQRRKSCRHEKFPQPAIADGCAD
Ga0224545_10520771	3300022881	Soil	RFDPTMDKIFVDQALQAYLEKTGDMRPFELLPVAITSQILREAQRLKGFRSGRIGQSAAADRCGEP
Ga0209115_10355062	3300027567	Forest Soil	MDTIFVDQALQAYRDKTGDLRPFEALPIQIASHILREAQRLKGFRNGRFSQPAAADGMDG
Ga0209733_11352682	3300027591	Forest Soil	LILRLNLFDPTMDKIFVDEALQAYREKTGDMRPFELLPVAITSQILREAQRLKGFQSAGPSQSAAADRCGEP
Ga0209736_11825721	3300027660	Forest Soil	MDTIFVDQALQAYREETGDMRPFESLPIAVTSQILREAQRLKGFRSGRLSQPE
Ga0209655_101255822	3300027767	Bog Forest Soil	MDTIFVNQALEAYRETTGDVRPFEALPIEVTSRILREAQRLKGFGNGSFPQPAAADGCVD
Ga0209040_100476653	3300027824	Bog Forest Soil	MDTIFLETALQAYRDKTGDMRSWDSLPVAITSQILMDAQRLKGFRSKSFSQPAAADNYGD
Ga0209580_103275842	3300027842	Surface Soil	MDTIFVDEALQAYREKTGDMRPFEALPVAVTSQILREAQRLKGFRCGRFSQPAAAEGCGD
Ga0209274_100792752	3300027853	Soil	MDKIFVDEALQAYQDKTGDMRPWHLLPVAITSQILMDAQRRKSCRHEKFPQPAIADGCAD
Ga0209693_100065362	3300027855	Soil	MDKIFVDAALQAYRDKTGDMRPWHLLPVALTSQILMDAQRRKSCHHGKFPQPAAADGCID
Ga0209169_100095554	3300027879	Soil	MDTIFVDQALQAYREETGDLRPFEALPVEITSRILREAQRLKGSGNGSFPQPATADGCVD
Ga0209275_100033532	3300027884	Soil	MDTIFVDQALRAYRDKTGDLRPFEALPVEVTSKILREAQRLKGFGNGSFPQPAAADGCVD
Ga0209275_100103962	3300027884	Soil	MDKIFVDEALRAYRDKTGDMRPWHLLPVAVTSQILMDAQRRKSCRHGKFPQPATADGCAD
Ga0308309_100501552	3300028906	Soil	MDTIFVDEALQAYREETGDMRPFETLPVLVTSQILREAQRLKGARSGRRSPPLVADEAAECEG
Ga0308309_101595152	3300028906	Soil	MDKIFVDEALQAYQDKTGDMRPWHLLPVAITSQILMDAQRRKTCRHGKFPQPATADGCAE
Ga0310037_100294732	3300030494	Peatlands Soil	MDKIFVDEALQAYRDKTGDMRPWHLLPVAVTSDILMDAQRRKSCRHGKFPQPAAADGCVD
Ga0310037_103693701	3300030494	Peatlands Soil	MDTIFVDQALQAYRDKTGDMRSWELLPVAITSQILRDAQQLKFRSGRFSQP
Ga0310038_102516231	3300030707	Peatlands Soil	MDTIFVDEALQAYREKTGDTRPFELLPVPVTSQILREAQRLKGFRSGRVDQPATANRAAEREG
Ga0265462_112894482	3300030738	Soil	MDTIFVDHALKAYRDKTGDMRPFEALPIEVTSRILREAQRLKGFGNGSFPQPAAADGCGD
Ga0265745_10310872	3300030759	Soil	VDEALQAYRDKTGDLRPWHLLPVAVTSQILMDAQRRKSCRHEKFPQPAIADGCADG
Ga0265753_10034082	3300030862	Soil	MDKIFVDEALQAYQDKTGDLRPWHLLPVAITSQILMDAQRRKSCHHGKFPQSAAADG
Ga0265769_1009393	3300030888	Soil	NMDTIFVNQALEAYRETTGDVRPFEALPIEVTSRILREAQRLKGFGNGSFPQPAAADGCVDS
Ga0265769_1237522	3300030888	Soil	MDTIFVDEALQAYRDKTADMRPFESLPVLVTSQILREAQRLKGFRVERSAAPTAVDGAAEGER
Ga0265740_10302952	3300030940	Soil	DKTGDLRPWHLLPVAVTSQILMDAQRRKSCRHEKFPQPAIADGCADG
Ga0265744_1091412	3300031017	Soil	MDTIFVDEALQAYRDKTGDMRPFESLPVLVTSQILREAQRLKGFRVERSAAPTAVDGAAEGER
Ga0265760_100006952	3300031090	Soil	VDEALQAYRDKTGDMRPFESLPVLVTSQILREAQRLKGFRVERSAAPTAVDGAAEGER
Ga0265760_103127821	3300031090	Soil	MDTIFVDQALQAYREKTGDMRPFELLPVAITSQILREAQRLKGYRKGSFSEPATAEKEC
Ga0310686_1022711146	3300031708	Soil	MDTIFVDEALQAYREKTGDMRPFEALPVTVTSHILREAQRLKGFRSGSFSQPATADGCGD
Ga0310686_1134489522	3300031708	Soil	MDTIFVNQALEAYRETTGDMRPFEALPVEVTSRILREAQRLKGFGNGSFPQPAAADGCVD
Ga0307476_102749532	3300031715	Hardwood Forest Soil	MDTIFVDEALQAYRDKTGDMRPFEALPVLVTSQILREAQRLKGFRSGRLSQPATAESCGD
Ga0307476_103606972	3300031715	Hardwood Forest Soil	MDKIFVDEALQTYREKTGDMRPFELLPVAITSQILREAQRLKGFQSAGLNQSAAADRCGE
Ga0307478_102689401	3300031823	Hardwood Forest Soil	MDTIFVDEALQAYREKTGDMRPFEALPVAVTSQILREAQRLKGFRSGTFSQPATAEGCGD
Ga0311301_100867393	3300032160	Peatlands Soil	VDEALQAYREKTGDMRRFELLPVPITSLILREAQRLKGFRSGRTSQPMTVNMAAKGEG
Ga0311301_101954784	3300032160	Peatlands Soil	DEALQAYREKTGDTRPFELLPVPVTSQILREAQRLKGFRSGRVDQPATANRAAEREG
Ga0334790_104770_548_733	3300033887	Soil	MDKIFVDQALQAYREKTGDMRPFELLPVAITSQILREAQRLKGFRSGRIGQSAAADRCGE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052173

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences