NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F052170

Metagenome Family F052170

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F052170
Family Type Metagenome
Number of Sequences 143
Average Sequence Length 67 residues
Representative Sequence MNSKFDDLVRSLDPQTLEELRRSVAAELGGRREETAIQIEHIHPKMSADAREEAAREIGRVLRGESLDA
Number of Associated Samples 103
Number of Associated Scaffolds 143

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 79.72 %
% of genes near scaffold ends (potentially truncated) 24.48 %
% of genes from short scaffolds (< 2000 bps) 86.01 %
Associated GOLD sequencing projects 89
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (71.329 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere
(11.888 % of family members)
Environment Ontology (ENVO) Unclassified
(51.748 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(58.741 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 54.64%    β-sheet: 0.00%    Coil/Unstructured: 45.36%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 143 Family Scaffolds
PF08241Methyltransf_11 5.59
PF02912Phe_tRNA-synt_N 5.59
PF00543P-II 2.80
PF05175MTS 2.10
PF00909Ammonium_transp 2.10
PF01370Epimerase 1.40
PF01804Penicil_amidase 0.70
PF13847Methyltransf_31 0.70
PF05067Mn_catalase 0.70
PF00988CPSase_sm_chain 0.70
PF07811TadE 0.70
PF00999Na_H_Exchanger 0.70
PF02910Succ_DH_flav_C 0.70

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 143 Family Scaffolds
COG0016Phenylalanyl-tRNA synthetase alpha subunitTranslation, ribosomal structure and biogenesis [J] 5.59
COG0347Nitrogen regulatory protein PIISignal transduction mechanisms [T] 2.80
COG0004Ammonia channel protein AmtBInorganic ion transport and metabolism [P] 2.10
COG0505Carbamoylphosphate synthase small subunitAmino acid transport and metabolism [E] 1.40
COG0025NhaP-type Na+/H+ or K+/H+ antiporterInorganic ion transport and metabolism [P] 0.70
COG0475Kef-type K+ transport system, membrane component KefBInorganic ion transport and metabolism [P] 0.70
COG2366Acyl-homoserine lactone (AHL) acylase PvdQSecondary metabolites biosynthesis, transport and catabolism [Q] 0.70
COG3004Na+/H+ antiporter NhaAEnergy production and conversion [C] 0.70
COG3263NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domainsEnergy production and conversion [C] 0.70
COG3546Mn-containing catalase (includes spore coat protein CotJC)Inorganic ion transport and metabolism [P] 0.70
COG4651Predicted Kef-type K+ transport protein, K+/H+ antiporter domainInorganic ion transport and metabolism [P] 0.70


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A71.33 %
All OrganismsrootAll Organisms28.67 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001213|JGIcombinedJ13530_103687422Not Available812Open in IMG/M
3300003310|D1draft_1008605All Organisms → cellular organisms → Bacteria → Acidobacteria4316Open in IMG/M
3300003432|JGI20214J51088_10987737Not Available553Open in IMG/M
3300004092|Ga0062389_102036105All Organisms → cellular organisms → Bacteria750Open in IMG/M
3300005327|Ga0070658_10040933All Organisms → cellular organisms → Bacteria3738Open in IMG/M
3300005329|Ga0070683_100278563Not Available1591Open in IMG/M
3300005336|Ga0070680_100476180All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1067Open in IMG/M
3300005336|Ga0070680_100984894Not Available728Open in IMG/M
3300005338|Ga0068868_100201775Not Available1658Open in IMG/M
3300005338|Ga0068868_102278882Not Available516Open in IMG/M
3300005344|Ga0070661_101809700Not Available518Open in IMG/M
3300005355|Ga0070671_100122353All Organisms → cellular organisms → Bacteria2190Open in IMG/M
3300005355|Ga0070671_100162929All Organisms → cellular organisms → Bacteria1885Open in IMG/M
3300005445|Ga0070708_100275085All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1584Open in IMG/M
3300005458|Ga0070681_10197903All Organisms → cellular organisms → Bacteria1928Open in IMG/M
3300005458|Ga0070681_10603851Not Available1012Open in IMG/M
3300005471|Ga0070698_101970074Not Available537Open in IMG/M
3300005530|Ga0070679_100832947Not Available866Open in IMG/M
3300005533|Ga0070734_10693688Not Available579Open in IMG/M
3300005538|Ga0070731_11117576Not Available521Open in IMG/M
3300005548|Ga0070665_100481085Not Available1252Open in IMG/M
3300005563|Ga0068855_100000803All Organisms → cellular organisms → Bacteria38843Open in IMG/M
3300005563|Ga0068855_101103110Not Available829Open in IMG/M
3300005563|Ga0068855_101417282Not Available716Open in IMG/M
3300005616|Ga0068852_101879225Not Available621Open in IMG/M
3300005718|Ga0068866_10084266All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1715Open in IMG/M
3300005834|Ga0068851_10562626Not Available690Open in IMG/M
3300005836|Ga0074470_10331753Not Available1114Open in IMG/M
3300005836|Ga0074470_11745051All Organisms → cellular organisms → Bacteria30451Open in IMG/M
3300005842|Ga0068858_101058935Not Available796Open in IMG/M
3300005843|Ga0068860_100498446Not Available1215Open in IMG/M
3300005993|Ga0080027_10136538Not Available936Open in IMG/M
3300006041|Ga0075023_100608772Not Available509Open in IMG/M
3300006047|Ga0075024_100413067Not Available689Open in IMG/M
3300006050|Ga0075028_100078922All Organisms → cellular organisms → Bacteria1642Open in IMG/M
3300006050|Ga0075028_100108215Not Available1427Open in IMG/M
3300006050|Ga0075028_100894794Not Available546Open in IMG/M
3300006052|Ga0075029_100250076All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1119Open in IMG/M
3300006055|Ga0097691_1128620Not Available699Open in IMG/M
3300006172|Ga0075018_10448512Not Available664Open in IMG/M
3300006173|Ga0070716_100519299Not Available882Open in IMG/M
3300006354|Ga0075021_10036220All Organisms → cellular organisms → Bacteria2822Open in IMG/M
3300006354|Ga0075021_10224215All Organisms → cellular organisms → Bacteria1152Open in IMG/M
3300006354|Ga0075021_10718836Not Available642Open in IMG/M
3300006358|Ga0068871_101446076Not Available649Open in IMG/M
3300006638|Ga0075522_10102271All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1550Open in IMG/M
3300009093|Ga0105240_10265083Not Available1980Open in IMG/M
3300009093|Ga0105240_11209611Not Available800Open in IMG/M
3300009098|Ga0105245_10122185All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2434Open in IMG/M
3300009098|Ga0105245_10192991All Organisms → cellular organisms → Bacteria1952Open in IMG/M
3300009101|Ga0105247_10109591All Organisms → cellular organisms → Bacteria1775Open in IMG/M
3300009101|Ga0105247_10372445Not Available1010Open in IMG/M
3300009174|Ga0105241_10086502Not Available2465Open in IMG/M
3300009174|Ga0105241_10203361All Organisms → cellular organisms → Bacteria1655Open in IMG/M
3300009174|Ga0105241_10891572Not Available825Open in IMG/M
3300009176|Ga0105242_10094642All Organisms → cellular organisms → Bacteria2520Open in IMG/M
3300009176|Ga0105242_11865631Not Available641Open in IMG/M
3300009176|Ga0105242_12070749Not Available612Open in IMG/M
3300009177|Ga0105248_12086593Not Available644Open in IMG/M
3300009545|Ga0105237_10315123All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium1568Open in IMG/M
3300009545|Ga0105237_11495784Not Available682Open in IMG/M
3300009551|Ga0105238_10106567Not Available2784Open in IMG/M
3300009551|Ga0105238_10756507Not Available986Open in IMG/M
3300010371|Ga0134125_10894219Not Available975Open in IMG/M
3300010371|Ga0134125_11960672Not Available637Open in IMG/M
3300010373|Ga0134128_11885279Not Available658Open in IMG/M
3300010379|Ga0136449_101722200Not Available943Open in IMG/M
3300010400|Ga0134122_11936010Not Available626Open in IMG/M
3300010401|Ga0134121_11510754Not Available687Open in IMG/M
3300011119|Ga0105246_12260418Not Available530Open in IMG/M
3300011271|Ga0137393_10595305Not Available948Open in IMG/M
3300012189|Ga0137388_10929984Not Available804Open in IMG/M
3300012208|Ga0137376_11786681Not Available505Open in IMG/M
3300012211|Ga0137377_11455320Not Available612Open in IMG/M
3300012917|Ga0137395_10556559Not Available828Open in IMG/M
3300012917|Ga0137395_11171016Not Available540Open in IMG/M
3300012931|Ga0153915_12877754Not Available562Open in IMG/M
3300013296|Ga0157374_10348805Not Available1470Open in IMG/M
3300013296|Ga0157374_12451993Not Available549Open in IMG/M
3300013306|Ga0163162_10015780All Organisms → cellular organisms → Bacteria7382Open in IMG/M
3300013306|Ga0163162_11700631Not Available721Open in IMG/M
3300013307|Ga0157372_10373221All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium1662Open in IMG/M
3300013307|Ga0157372_12458691Not Available598Open in IMG/M
3300013308|Ga0157375_11489767Not Available798Open in IMG/M
3300014056|Ga0120125_1115687Not Available636Open in IMG/M
3300014164|Ga0181532_10650480Not Available570Open in IMG/M
3300014501|Ga0182024_12170059Not Available609Open in IMG/M
3300014838|Ga0182030_10613998All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1045Open in IMG/M
3300014838|Ga0182030_11010476Not Available731Open in IMG/M
3300014969|Ga0157376_11861978Not Available638Open in IMG/M
3300015063|Ga0167649_100776All Organisms → cellular organisms → Bacteria4518Open in IMG/M
3300015195|Ga0167658_1027338Not Available1531Open in IMG/M
3300015195|Ga0167658_1027403All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1529Open in IMG/M
3300020580|Ga0210403_11256635Not Available568Open in IMG/M
3300021178|Ga0210408_10859305Not Available708Open in IMG/M
3300025321|Ga0207656_10372806Not Available715Open in IMG/M
3300025911|Ga0207654_10051154All Organisms → cellular organisms → Bacteria2377Open in IMG/M
3300025911|Ga0207654_10086396All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae1901Open in IMG/M
3300025911|Ga0207654_11014162Not Available604Open in IMG/M
3300025912|Ga0207707_10008569All Organisms → cellular organisms → Bacteria → Acidobacteria8865Open in IMG/M
3300025912|Ga0207707_10015250All Organisms → cellular organisms → Bacteria6692Open in IMG/M
3300025912|Ga0207707_10341834Not Available1290Open in IMG/M
3300025913|Ga0207695_10013208All Organisms → cellular organisms → Bacteria9855Open in IMG/M
3300025913|Ga0207695_10418059All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1225Open in IMG/M
3300025913|Ga0207695_11093095Not Available677Open in IMG/M
3300025914|Ga0207671_10300918All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1267Open in IMG/M
3300025920|Ga0207649_10508906Not Available917Open in IMG/M
3300025921|Ga0207652_10787031Not Available845Open in IMG/M
3300025924|Ga0207694_10136605All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis1970Open in IMG/M
3300025927|Ga0207687_10116553Not Available1991Open in IMG/M
3300025932|Ga0207690_10440719Not Available1045Open in IMG/M
3300025934|Ga0207686_10054298All Organisms → cellular organisms → Bacteria2509Open in IMG/M
3300025934|Ga0207686_10237245Not Available1325Open in IMG/M
3300025934|Ga0207686_11238085Not Available612Open in IMG/M
3300025939|Ga0207665_10272156Not Available1258Open in IMG/M
3300025942|Ga0207689_10586556Not Available937Open in IMG/M
3300026095|Ga0207676_10473941Not Available1184Open in IMG/M
3300026142|Ga0207698_11219641Not Available766Open in IMG/M
3300026142|Ga0207698_11427250Not Available707Open in IMG/M
3300026142|Ga0207698_12757664Not Available500Open in IMG/M
3300027787|Ga0209074_10059015Not Available1196Open in IMG/M
3300027894|Ga0209068_10009564All Organisms → cellular organisms → Bacteria4585Open in IMG/M
3300027894|Ga0209068_10157473All Organisms → cellular organisms → Bacteria1232Open in IMG/M
3300027986|Ga0209168_10465562Not Available612Open in IMG/M
3300028381|Ga0268264_10697956Not Available1008Open in IMG/M
3300028800|Ga0265338_10531084Not Available825Open in IMG/M
3300028802|Ga0307503_10682410Not Available575Open in IMG/M
3300029943|Ga0311340_10938048Not Available716Open in IMG/M
3300029987|Ga0311334_10882506Not Available739Open in IMG/M
3300029999|Ga0311339_11065105Not Available752Open in IMG/M
3300031234|Ga0302325_10683353All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA71484Open in IMG/M
3300031241|Ga0265325_10296400Not Available723Open in IMG/M
3300031249|Ga0265339_10418716Not Available624Open in IMG/M
3300031708|Ga0310686_105891921Not Available1172Open in IMG/M
3300031708|Ga0310686_113937577Not Available1116Open in IMG/M
3300031715|Ga0307476_10518064Not Available884Open in IMG/M
3300031718|Ga0307474_11150015Not Available614Open in IMG/M
3300031754|Ga0307475_11011766Not Available653Open in IMG/M
3300032163|Ga0315281_10123925All Organisms → cellular organisms → Bacteria2963Open in IMG/M
3300032174|Ga0307470_10029381All Organisms → cellular organisms → Bacteria2595Open in IMG/M
3300033433|Ga0326726_10615015Not Available1045Open in IMG/M
3300033433|Ga0326726_11239018Not Available726Open in IMG/M
3300033480|Ga0316620_11503188Not Available665Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere11.89%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds8.39%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere6.29%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere6.99%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere6.99%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.20%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.50%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.80%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.80%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.10%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil2.10%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.10%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa2.10%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.10%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere2.10%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.10%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland1.40%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)1.40%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.40%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.40%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog1.40%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.40%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.40%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.40%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.70%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.70%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.70%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.70%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.70%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.70%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.70%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.70%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.70%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.70%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.70%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.70%
Down-Flow Hanging Sponge ReactorEngineered → Bioreactor → Unclassified → Unclassified → Unclassified → Down-Flow Hanging Sponge Reactor0.70%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300003310Down-flow hanging sponge reactor microbial communities from the University of Illinois at Urbana-Champaign, USA - L1-648F-DHSEngineeredOpen in IMG/M
3300003432Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 BulkEnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300005836Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBBEnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005993Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046EnvironmentalOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300006047Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006055Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006638Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-AEnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014056Permafrost microbial communities from Nunavut, Canada - A20_5cm_0MEnvironmentalOpen in IMG/M
3300014164Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014838Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015063Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3b, vegetated patch on medial moraine)EnvironmentalOpen in IMG/M
3300015195Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300025321Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027986Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028800Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaGHost-AssociatedOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300029943I_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300029987I_Fen_E3 coassemblyEnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031241Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaGHost-AssociatedOpen in IMG/M
3300031249Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaGHost-AssociatedOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300032163Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033480Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_BEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ13530_10368742223300001213WetlandMESKFDDLVRSLTPEMLGELRRAVTTETGQRRQQTAIQLEHIHPRMSEEERDQAAAEIARVLSGADYYA*
D1draft_100860563300003310Down-Flow Hanging Sponge ReactorMNSKFDDLVRSLTPETLEELRRSVAEELGGRREQSAIQIENIHAKMSDDEREQAMREIGRVLRGEDAHA*
JGI20214J51088_1098773723300003432WetlandMTTKFDDLVQSLDPATLEELRRSVAAELGGRRAQTSIKIEEIHPRMTAEAREEAAREIARVLRGEDHSG*
Ga0062389_10203610533300004092Bog Forest SoilLVRSLDPPTLEELRRSVAAELGGRREESAIQIEHIHPKMTVEAREEAAREIGRVLRGEGQNA*
Ga0070658_1004093353300005327Corn RhizosphereMNSKFDDLVRSLDPHTLEELRRSVAAELGGRREETAIQIEHIHPKMSADAREEAAREIGRVLRGESLDA*
Ga0070683_10027856323300005329Corn RhizosphereMNSKFDDLVRSLDAQTLEELRRSVATELGGRHEEAAIQIEQIHPKMSAEAREDAAREIARVLRGDA*
Ga0070680_10047618033300005336Corn RhizosphereVRSLDAQTLEELRRSVATELGGRHEEAAIQIEQIHPKMSAEAREDAAREIARVLRGDA*
Ga0070680_10098489413300005336Corn RhizosphereMNSKFDDLVRSLDAQTLEELRRSVAMELGGRHEETAIQIEHIHPKMSAEAREDAAREIARVLRGDA*
Ga0068868_10020177523300005338Miscanthus RhizosphereMNSKFDDLVRSMDPRTLEELKRSVVAELGGRRDESAIQIEQIHPKMSADAREEAAREIARVLRGESLDA*
Ga0068868_10227888223300005338Miscanthus RhizosphereMNAKFDDLVRSLDPQTLEELRRSVATELGGRRQETAIQLENIHPKMSSDAREEAAREIGRVLRGENTDA*
Ga0070661_10180970013300005344Corn RhizosphereTTKFDDLVRSLDPRTLEELRRSVAAELGGRREQTAIQLEQIHPRMTQEAREEASREIARVLRGEEENA*
Ga0070671_10012235333300005355Switchgrass RhizosphereMNSKFDDLVRSLDPQTLEELKRSVVAELGGRREETAIQIEQIHPKMSADAREEAAREIGRVLRGESLDA*
Ga0070671_10016292913300005355Switchgrass RhizosphereMNSKFDDLVRSLDPQTLEELKRSVVAELGGRREETAIQIEQIHPKMSADAREEAAREIGRVLRGENLDA*
Ga0070708_10027508513300005445Corn, Switchgrass And Miscanthus RhizosphereLDPQTLEELRRSVAAELGGRHEAAAIQIEHIHPKMSAEAREDAAREIARVLRGDA*
Ga0070681_1019790333300005458Corn RhizosphereMNSKFDDLVRSLDPQTLEELRRSVVAELGGRREETAIQIEQIHPKMSADAREEAAREIGRVLRGENLDA*
Ga0070681_1060385123300005458Corn RhizosphereMNSKFDDLVRSLDPQTLEELRRSVAAELGGRREETAIQIEHIHPKMSADAREEAAREIGRVLRGESLDA*
Ga0070698_10197007423300005471Corn, Switchgrass And Miscanthus RhizosphereMNSKFDDLVRSLDPQTLEELRRSVAMELGGRHQETAIQIENIHPKMSAEAREDAAREIARVLRGDA*
Ga0070679_10083294723300005530Corn RhizosphereMNSKFDDLVRSLDPQTLEELKRSVAAELGGRREERAIQIEQIHPKMSADAREEAAREIGRVLRGESLDA*
Ga0070734_1069368823300005533Surface SoilMNSKFDDLVRSLDPQTLEELRRAVAVELGGRHEETAIQIEQIHPRMTVEAREDAAREIARVLRGDA*
Ga0070731_1111757613300005538Surface SoilMNSKFDDLVRSMDPQTLEELKRSVAAELGGRREESAIQIEHIHPKMSPDAREEAAREIGRVLRGENLDA*
Ga0070665_10048108513300005548Switchgrass RhizosphereMNAKFDDLVRSLDAQTLEELRRSVVTELGGRHEEAAIQLEQIHPKMSAEAREDAAREIARVLRGDA*
Ga0068855_100000803123300005563Corn RhizosphereMNSKFDDLVRSLDASTLEELRRSVAAELGGRHGETAIQIEHIHPKMSAEAREDAAREIGRVLRGEGPDA*
Ga0068855_10110311023300005563Corn RhizosphereMNSKFDDLVRSLDAQTLEELRRSVAAELGGRHEQTAIQLEQIHPKMTVEAREDAAREIARVLRGDA*
Ga0068855_10141728223300005563Corn RhizosphereMNSKFDDLVRSLDAQTLEELRRSVATELGGRHEEAAIQIEQIHPKMSAEAWEDAAREIARVLRGDA*
Ga0068852_10187922523300005616Corn RhizosphereMNSKFDDLVRSLDPQTLEELRRSVVAELGGRREETAIQIEQIHPKMSADVREEAAREIGRVLRGENLDA*
Ga0068866_1008426623300005718Miscanthus RhizosphereMNSKFDDLVRSLDAQTLEELRRSVVTELGGRHEEAAIQLEQIHPKMSAEAREDAAREIARVLRGDA*
Ga0068851_1056262633300005834Corn RhizosphereMNSKFDDLVRSLDPQTLEELRRSVVAELGWRREETAIQIEQIHPKMSADAREEAAREIGRVLRGENLDA*
Ga0074470_1033175323300005836Sediment (Intertidal)MNSKFDDLLRSMDPQTLEELRRSVAVELGGRRQETAIQIEQIHPKMSAEARDEAAREINRVLRGESLDA*
Ga0074470_11745051183300005836Sediment (Intertidal)MNSKFDDLVHSLAPETLEQLRQAVAAEVGGRRQESAIQIENIHARMTDAERQQAMQEIARVLRGEDAHA*
Ga0068858_10105893513300005842Switchgrass RhizosphereMNAKFDDLVRSLDPQTLEELRRSVATELDGRHEEAAIQLEQIHPKMSAEAREDAAREIARVLRGDA*
Ga0068860_10049844613300005843Switchgrass RhizosphereDDLVRSMDPRTLEELKRSVVAELGGRRDESAIQIEQIHPKMSADAREEAAREIARVLRGESLDA*
Ga0080027_1013653833300005993Prmafrost SoilMNSKFDDLVRSLDPRTLEELRRSVVAELGGRREETAIQIEQIHPKMSADAREEAAREIGRVLRGESLDA*
Ga0075023_10060877223300006041WatershedsMNTKFDDLVRSLDERLLEELRRSVTAEVNSRREQTAIQIEQIHPKMSAAAREEAAKEIARALRGEDPHA*
Ga0075024_10041306723300006047WatershedsMNTKFDELVRGLDQPMLEELRRSVATEVGARREQTAIQLEHIHPKMTTAARDEAAAEIARILRGEEPHA*
Ga0075028_10007892243300006050WatershedsLDPNTLEELRRSVATELGGRRQETAIQIEHIHPKMSADAREEAAREIGRVLRGESMDA*
Ga0075028_10010821533300006050WatershedsMNTKFDDLVRSLDERLLEELRRSVTAEVNSRREQTAIQIEQIHPKMSAAAREEAAKEIARALRGEESNA*
Ga0075028_10089479423300006050WatershedsMNTKFDDLVRSLDPRMLEELRRSVAVEVNTRREQSAIQIEQIHPKMSNEAREEAAREIARALRGEDSHA*
Ga0075029_10025007633300006052WatershedsMKTRFDDLVQSLDAATLEELRRSVAAEVGGRREQTAIKIEEIHPRMTAEAREEAAREIARVLRGEEHNG*
Ga0097691_112862023300006055Arctic Peat SoilMNSKFDDLVRSLDAQTLEELRRSVATELGGRHEQTAIQIEHIHPKMSAEAREDAAHEIARVLRGDA*
Ga0075018_1044851223300006172WatershedsMNAKFDDLVRSLDPQTLEELRRSVATELGGRREETAIQIEHIHPKMSAEAREEAAREIGRVLRGDGSDA*
Ga0070716_10051929923300006173Corn, Switchgrass And Miscanthus RhizosphereMNAKFDDLVRSLDPQTLEELRRSVATELGGRRQETAIQIEHIHPKMTADAREEAAREIGRVLRGENMDA*
Ga0075021_1003622043300006354WatershedsMNAKFDDLVRSLDPNTLEELRRSVATELGGRRQETAIQIEHIHPKMSADAREEAAREIGRVLRGESMDA*
Ga0075021_1022421543300006354WatershedsPFPMNTKFDDLVRSLDPRMLEELRRSVAVEVNTRREQSAIQIEQIHPKMSNEAREEAAREIARALRGEDSHA*
Ga0075021_1071883623300006354WatershedsMNSKFDDLVRSLDPRTLEELKRSVVAELGGRREEAAIQIEQIHPKMSADAREEAAREISRVLRGENLDA*
Ga0068871_10144607633300006358Miscanthus RhizosphereLDPQTLEELKRSVVAELGGRREETAIQIEQIHPKMSADAREEAAREIGRVLRGESLDA*
Ga0075522_1010227123300006638Arctic Peat SoilMNSKFDDLVQSLDAQTLEELRRSVAAELGGRHEAAAIQLEQIHPRMTVEAREDAAREIARVLRGDA*
Ga0105240_1026508333300009093Corn RhizosphereMDPRTLEELKRSVVAELGGRRDESAIQIEQIHPKMSADAREEAAREIARVLRGESLDA*
Ga0105240_1120961123300009093Corn RhizosphereMTHMNSKFDDLVRSLDAQTLEELRRSVATELGGRHEEAAIQIEQIHPKMSAEAREDAAREIARVLRGDA*
Ga0105245_1012218533300009098Miscanthus RhizosphereMNSKFDDLVRSLDPQTLEELRRSVASELGGRREESAIQIEQIHPKMSVEAREEAAREIGRVLRGEGLNA*
Ga0105245_1019299123300009098Miscanthus RhizosphereMNMNSKFDDLVRSLDPQTLEELKRSVAAELGGRREEAAIQIEQIHPKMSADAREEAAREIGRVLRGENLDA*
Ga0105247_1010959143300009101Switchgrass RhizosphereMNMNSKFDDLVRSLDPQTLEELKRSVVAELGGRREETAIQIEQIHPKMSADAREEAAREIGRVLRGENLDA*
Ga0105247_1037244523300009101Switchgrass RhizosphereMNAKFDDLVRSLDAQTLEELRRSVATELGGRHEEAAIQIEQIHPKMSAEAREDAAREIARVLRGDA*
Ga0105241_1008650233300009174Corn RhizosphereMNSKFDDLVRSLDPQTLEELKRSVLAELGGRREETAIQIEQIHPKMSADAREEAAREIGRVLRGESLDA*
Ga0105241_1020336113300009174Corn RhizosphereMNSKFDDLVRSLDPQTLEELRRSVVAELGGRREETAIQIEQIHPKMSADAREEAAREIGRVLRGESLDA*
Ga0105241_1089157233300009174Corn RhizosphereMNSKFDDLVRSLDPHTLEELKRSVVAELGGRREETAIQIEQIHPKMSADAREEAAREIGRVLRGESLDA*
Ga0105242_1009464223300009176Miscanthus RhizosphereMNTKFDDLVQSLDPRTLEELRRSVAMELGGRREQTAIQIEQIHPKMTLEAREEAAREIARVLRGEDDNA*
Ga0105242_1186563123300009176Miscanthus RhizosphereMNSKFDDLVRSLDPQTLEELKRSVVAELGGRREEAIQIEQIHPKMSADAREEAAREIGRVLRGESMDA*
Ga0105242_1207074913300009176Miscanthus RhizosphereMNSKFDDLVRSLDPQTLEELKRSVVAELGGRREETAIQIEQIHPKMSADAREEAAREIDRVLRGESLDA*
Ga0105248_1208659323300009177Switchgrass RhizosphereMNSKFDDLVRSLDPQTLEELKRSVVAELGGRREETAIQIEQIHPKMSADAREEAAREIGRVLRG
Ga0105237_1031512313300009545Corn RhizosphereMNSKFDDLVRSLDAQTLEELRRSVAAELGGRHEQTAIQLEQIHPKMTVEAREDAAREIA
Ga0105237_1149578423300009545Corn RhizosphereMDPQTLEELRRAVATELGGRHEETAIQLEHIHPKMSAEAREDAAREIARVLRGDA*
Ga0105238_1010656733300009551Corn RhizosphereMTTKFDDLVRSLDPRTLEELRRSVAAELGGRREQTAIQLEQIHPRMTQEAREEASREIARVLRGEEENA*
Ga0105238_1075650723300009551Corn RhizosphereMNSKFDDLVRSLDAQTLEELRRSVAAELGGRHEQSAIQIEQIHPKMTVEAREDAAREIARVLRGDA*
Ga0134125_1089421923300010371Terrestrial SoilMNAKFDDLVRSLDPQTLEELRRSVATELGGRHEEAAIQIEQIHPKMSTEARENAAREIARVLRGDA*
Ga0134125_1196067223300010371Terrestrial SoilMNSKFDDLVRSLDPHTLEELRRSVAAELGGQREETAIQIEHIHPKMSADAREEAAREIGRVLRGESLDA*
Ga0134128_1188527923300010373Terrestrial SoilMNSKFDDLVQSLDPQTLEELRRSVVAELGGRHEATAIQLEQIHPRMTVEAREDAAREIARVLRGDA*
Ga0136449_10172220023300010379Peatlands SoilMKTRFDDLVQSLDAATLEELRRSVAAEVGGRREQTALKIEEIHPRMTAEAREEAAREIARVLRGEEHNG*
Ga0134122_1193601023300010400Terrestrial SoilMNTKFDDLVQSLDPRTLEELRRSVAAELGGRREQTAIQIEQIHPKMTLEAREEAAREIARVLRGEDDNA*
Ga0134121_1151075413300010401Terrestrial SoilMNTKFDDLVQSLDPRTLEELRRSVAAELGGRREQTAIQIEQIHPKMTLEAREEAAREIARVLRG
Ga0105246_1226041813300011119Miscanthus RhizosphereKFDDLVRSLDAQTLEELRRSVATELGGRHEEAAIQIEQIHPKMSAEAWEDAAREIARVLRGDA*
Ga0137393_1059530523300011271Vadose Zone SoilMNTKFDELVRTLDPATLEELRRSVAAEMGGRREQTAIQIEHIHPKMTAEAREEAAREIARVLRGEDRNG*
Ga0137388_1092998423300012189Vadose Zone SoilMNTKFDELVRTLDPGTLEELRRSVAAEMGGRREQTAIQIEHIHPKMTAEAREEAAREIARVLRGEDSNG*
Ga0137376_1178668113300012208Vadose Zone SoilMNAKFDDLVRSLDPQTLEELRRSVATELGGRRQETAIQLEHIHPKMTADAREEAAREIGRVLSGENMDA*
Ga0137377_1145532023300012211Vadose Zone SoilMNTKFDELVRTLDAGTLEELRRSVAAEMGGRREQTAIQIEHIHPKMTAEAREEAAREIARVLRGEDRNG*
Ga0137395_1055655923300012917Vadose Zone SoilFRKRRHDRKDSTGINMNTKFDELVRTLDPGTLEELRRSVAAEMGGRREQTAIQIEHIHPKMTAEAREEAAREIARVLRGEDRNG*
Ga0137395_1117101623300012917Vadose Zone SoilMNSKFDDLVRSLDPQTLEELRRSVASELGGRREESAIQIEHIHPKMSVEAREEAAREIGRVLRGEGVNA*
Ga0153915_1287775423300012931Freshwater WetlandsMTTRFDDLVQSLDPGTLEELRRSVAAELGGRRAQTAIKIEEIHPRMTAEAREEAAREIARVLRGEDHSG*
Ga0157374_1034880513300013296Miscanthus RhizosphereKFDDLVRSMAPRTLEELKRSVVAELGGRRDESAIQIEQIHPKMSADAREEAAREIARVLRGESLDA*
Ga0157374_1245199323300013296Miscanthus RhizosphereMNSKFDDLVRSMDPQTLEELRRAVATELGGRHEETAIQLEHIHPKMSAEAREDAAREIARVLRGDA*
Ga0163162_1001578053300013306Switchgrass RhizosphereMNTKFDDLVRSLDPQTLEELKRSVVAELGGRREETAIQIEQIHPRMSADAREEAAREIGRVLRGENPNA*
Ga0163162_1170063123300013306Switchgrass RhizosphereMNAKFDDLVRSLDAQTLEELRRSVATELDGRHEEAAIQLEQIHPKMSAEAREDAAREIARVLRGDA*
Ga0157372_1037322133300013307Corn RhizosphereMNSKFDDLVRSLDAQTLEELRRSVAAELGGRHEQTAIQIEQIHPKMTVEAREDAAREIARVLRGDV*
Ga0157372_1245869123300013307Corn RhizosphereMNSKFDDLVRSLDPQTLEELKRSVAAEFGGRREERAIQIEQIHPKMSADAREEAAREIGRVLRGESLDA*
Ga0157375_1148976713300013308Miscanthus RhizosphereDDLVRSLDAQTLEELRRSVATELGGRHEEAAIQIEQIHPKMSAEAWEDAAREIARVLRGDA*
Ga0120125_111568723300014056PermafrostMNSKFDDLVRSLDPQTLEELRRSVVTELGGRREETAIQIEQIHPKMSADAREEAAREIGRVLRGESLDA*
Ga0181532_1065048013300014164BogSLDPQTLEELKRSVVAELGGRREETAIQIEQIHPKMTADAREEASREIGRVLRGESLDA*
Ga0182024_1217005923300014501PermafrostMNSKFDDLVRSLDPQTLEELRRSVAAELGGRREETAIQIEHIHPKMSADAREEAAREIGRVLRGESPDA*
Ga0182030_1061399813300014838BogMNSKFDDLVRSLDPRTLEELRRSVAAELGGRREESAIQIEHIHPKMSADAREEAAREIARVLRGENLDA*
Ga0182030_1101047613300014838BogMNSKFDDLVRSLDPQTLEELRRSVAAELGGRHEATAIQIEQIHPRMTVEAREDAAREIARVLRGD
Ga0157376_1186197823300014969Miscanthus RhizosphereMSSKFDDLVRSLDPQTLEELKRSVVAELGGRREETAIQIEQIHPKMSADAREEAAREIGRVLRGESLDA*
Ga0167649_10077643300015063Glacier Forefield SoilMNSKFDDLVRSLDPPTLEELRRSVAAELGGRREETAIQIEQIHPKMSADAREEAAREIGRVLRGESPDA*
Ga0167658_102733823300015195Glacier Forefield SoilMNSKFDDLVRSLDPQTLEELRRSVATELGGRREETAIQIEQIHPKMSAEAREEAAREIGRVLRGEGTNA*
Ga0167658_102740333300015195Glacier Forefield SoilVNSKFDDLVRSLDPQTLEELRRSVASELGGRREETAIQIEHIHPKMSAEAREQAAQEIGRVLRGEILDA*
Ga0210403_1125663523300020580SoilMNSKFDDLVRSMDPQTLEELRRSVVAELGGRREETAIQIEQIHPKMSADAREEAAREIGRVLRGESLDA
Ga0210408_1085930523300021178SoilMNSKFDDLVRSLDPQTLEELRRSVAAELGGRREETAIQLEQIHPKMSADAREEAAREIGRVLRRESLDA
Ga0207656_1037280613300025321Corn RhizosphereSKFDDLVRSMDPRTLEELKRSVVAELGGRRDESAIQIEQIHPKMSADAREEAAREIARVLRGESLDA
Ga0207654_1005115413300025911Corn RhizosphereMNSKFDDLVRSLDPQTLEELRRSVVAELGGRREETAIQIEQIHPKMSADAREEAAREIGRVLRGESLDA
Ga0207654_1008639643300025911Corn RhizosphereMNSKFDDLVRSMDPRTLEELKRSVVAELGGRRDESAIQIEQIHPKMSADAREEAAREIARVLRGESLDA
Ga0207654_1101416223300025911Corn RhizosphereMNSKFDDLVRSLDAQTLEELRRSVATELGGRHEEAAIQIEQIHPKMSAEAREDAAREIARVLRG
Ga0207707_10008569103300025912Corn RhizosphereMNSKFDDLVRSLDAQTLEELRRSVAMELGGRHEETAIQIEHIHPKMSAEAREDAAREIARVLRGDA
Ga0207707_1001525013300025912Corn RhizosphereDDLVRSLDPQTLEELKRSVAAELGGRREERAIQIEQIHPKMSADAREEAAREIGRVLRGESLDA
Ga0207707_1034183423300025912Corn RhizosphereMNSKFDDLVRSLDPQTLEELRRSVAAELGGRREETAIQIEHIHPKMSADAREEAAREIGRVLRGESLDA
Ga0207695_1001320883300025913Corn RhizosphereMNSKFDDLVRSLDASTLEELRRSVAAELGGRHGETAIQIEHIHPKMSAEAREDAAREIGRVLRGEGPDA
Ga0207695_1041805933300025913Corn RhizosphereMNSKFDDLVRSLDAQTLEELRRSVAAELGGRHEQTAIQLEQIHPKMTVEAREDAAREIARVLRGDA
Ga0207695_1109309513300025913Corn RhizosphereFDDLVRSMDPRTLEELKRSVVAELGGRRDESAIQIEQIHPKMSADAREEAAREIARVLRGESLDA
Ga0207671_1030091833300025914Corn RhizosphereHMNSKFDDLVRSLDPQTLEELKRSVAAELGGRREERAIQIEQIHPKMSADAREEAAREIGRVLRGENLDA
Ga0207649_1050890613300025920Corn RhizosphereMNSKFDDLVRSLDPHTLEELRRSVAAELGGRREETAIQIEHIHPKMSADAREEAAREIGRVLRGESL
Ga0207652_1078703123300025921Corn RhizosphereMNSKFDDLVRSLDPQTLEELKRSVAAELGGRREERAIQIEQIHPKMSADAREEAAREIGRVLRGESLDA
Ga0207694_1013660533300025924Corn RhizosphereMTTKFDDLVRSLDPRTLEELRRSVAAELGGRREQTAIQLEQIHPRMTQEAREEASREIARVLRGEEENA
Ga0207687_1011655333300025927Miscanthus RhizosphereMNSKFDDLVRSLDPQTLEELRRSVASELGGRREESAIQIEQIHPKMSVEAREEAAREIGRVLRGEGLNA
Ga0207690_1044071923300025932Corn RhizosphereMNSKFDDLVRSLDAQTLEELRRSVATELGGRHEEAAIQIEQIHPKMSAEAWEDAAREIARVLRGDA
Ga0207686_1005429823300025934Miscanthus RhizosphereMNTKFDDLVQSLDPRTLEELRRSVAMELGGRREQTAIQIEQIHPKMTLEAREEAAREIARVLRGEDDNA
Ga0207686_1023724523300025934Miscanthus RhizosphereMNAKFDDLVRSLDAQTLEELRRSVVTELGGRHEEAAIQLEQIHPKMSAEAREDAAREIARVLRGDA
Ga0207686_1123808523300025934Miscanthus RhizosphereMNSKFDDLVRSLDPQTLEELKRSVVAELGGRREEAIQIEQIHPKMSADAREEAAREIGRVLRGESMDA
Ga0207665_1027215633300025939Corn, Switchgrass And Miscanthus RhizosphereMNAKFDDLVRSLDPQTLEELRRSVATELGGRRQETAIQIEHIHPKMTADAREEAAREIGRVLR
Ga0207689_1058655613300025942Miscanthus RhizosphereHRKTIGEMTHMNSKFDDLVRSLDAQTLEELRRSVATELGGRHEEAAIQIEQIHPKMSAEAREDAAREIARVLRGDA
Ga0207676_1047394123300026095Switchgrass RhizosphereMNSKFDDLVRSLDAQTLEELRRSVATELGGRHEEAAIQIEQIHPKMSAEAREDAAREIARVLRGDT
Ga0207698_1121964123300026142Corn RhizosphereMNSKFDDLVRSLDAQTLEELRRSVAAELGGRHEQTAIQLEQIHPKMTVEAREDAAREIARVLRRDA
Ga0207698_1142725023300026142Corn RhizosphereMNSKFDDLVRSLDPQTLEELRRSVVAELGGRREETAIQIEQIHPKMSADVREEAAREIGRVLRGENLDA
Ga0207698_1275766413300026142Corn RhizosphereDLVRSLDPRTLEELRRSVAAELGGRREQTAIQLEQIHPRMTQEAREEASREIARVLRGEEENA
Ga0209074_1005901523300027787Agricultural SoilMNSKFDDLVRSLDPQTLEELRRSVVAELGGRREETAIQIEQIHPKMSADAREEAAREI
Ga0209068_1000956463300027894WatershedsMNAKFDDLVRSLDPNTLEELRRSVATELGGRRQETAIQIEHIHPKMSADAREEAAREIGRVLRGESMDA
Ga0209068_1015747333300027894WatershedsMNTKFDDLVRSLDPRMLEELRRSVAVEVNTRREQSAIQIEQIHPKMSNEAREEAAREIARALRGEDSHA
Ga0209168_1046556223300027986Surface SoilMNSKFDDLVRSLDPQTLEELKRSVVAELGGRREETAIQIEQIHPKMSADAREEAAREIGRVLRGENLDA
Ga0268264_1069795633300028381Switchgrass RhizosphereDDLVRSMDPRTLEELKRSVVAELGGRRDESAIQIEQIHPKMSADAREEAAREIARVLRGESLDA
Ga0265338_1053108423300028800RhizosphereMNSKFDDLVKSLDPQTLEELRRAVAVELGGRHEETAIQIEQIHPRMTVEARENAAREIARVLRGDA
Ga0307503_1068241023300028802SoilMNSKFDDLVRSLDPRTLEELKRSVVAELGGRREETAIQIEQIHPKMSADAREEAAREISRVLRGESLDA
Ga0311340_1093804823300029943PalsaMNSKFDDLVRSLDPSTLEELRRSVAAELGGRREESAIQIEHIHPKMTVEAREEAAREIGRVLRGEGQNA
Ga0311334_1088250633300029987FenMNSKFDDLVRSLDPRTLEELKRSVVAELGGRREETAIQIEQIHLKMSADAREEAAREIGRVLRGENLDA
Ga0311339_1106510513300029999PalsaMNSKFDDLVRSLDPRTLEELRRSVAAELGGRREESAIQIEHIHPKMSADAREEAAREIARVLRG
Ga0302325_1068335333300031234PalsaMNSKFDDLVRSLDPRTLEELRRSVAAELGGRREESAIQIEHIHPKMSADAREEAAREIARVLRGENLDA
Ga0265325_1029640013300031241RhizosphereRSLDPQTLEELRRSVAAELGGRREETAIQIEHIHPKMSADAREEAAREIGRVLRGESLDA
Ga0265339_1041871613300031249RhizosphereMNSKFDDLVRSLDPQTLEELRRAVAVELGGRHEETAIQIEQIHPKMTVEAREDAAREIARVLRGDA
Ga0310686_10589192133300031708SoilMNSKFDDLVRSLDPQTLEELKRSVAAELGGRREESAIQIEHIHPKMSADARKEAALEIARVLRGENLDA
Ga0310686_11393757723300031708SoilMKTRFDDLVQSLDAATLEELRRSVAMEVGGRREQTAIKIEEIHPRMTAEAREEAAREIARVLRGEEHRA
Ga0307476_1051806423300031715Hardwood Forest SoilMNSKFDDLVRSLDPQTLEELKRSVVAELGGRREETAIQIEQIHPKMSADAREEAAREIGRVLRGENPDA
Ga0307474_1115001523300031718Hardwood Forest SoilMNAKFDDLVRSLDPQTLEELRRSVATELGGRRQETAIQIEHIHPKMSADAREEAAREIGRVLRGENMDA
Ga0307475_1101176613300031754Hardwood Forest SoilMNAKFDDLVRSLDPQTLEELRRSVATELGGRRQETAIQIEHIHPKMTADTREEAAREIGRVLR
Ga0315281_1012392533300032163SedimentMNTKFDDLVRSLEPRTLEELRRSVATELGGRREQTAIQLEQIHPKMTLEAREEAAREIARVLRGEDRNG
Ga0307470_1002938133300032174Hardwood Forest SoilMNSKFDDLVRSLDPQTLEDLRRSVASELGGRREESAIQIEHIHPKMSADAREQAALEISRVLRGENLDA
Ga0326726_1061501513300033433Peat SoilMNTKFDDLVKSLNPATLEELRRSVVAEVEGRREQTAIQIEQIHPKMTAQAREEAAREIARVLRGEGNHG
Ga0326726_1123901823300033433Peat SoilMNSKFDDLLRSLDPQMLEELRRSVAAELGGRREETAMQIEHIHPKMSAEAREEAAREI
Ga0316620_1150318823300033480SoilMTTKFDDLVQSLDPATLEELRRSVAAELGGRRAQTSIKIEEIHPRMTAEAREEAAREIARVLRGEDHSG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.