Metagenome / Metatranscriptome Family F052163

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052163
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	56 residues
Representative Sequence	MAMDWHDTLMGSVLVISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA
Number of Associated Samples	123
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.13 %
% of genes near scaffold ends (potentially truncated)	26.57 %
% of genes from short scaffolds (< 2000 bps)	80.42 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.643 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (12.587 % of family members)
Environment Ontology (ENVO)	Unclassified (37.063 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.056 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 72.73% β-sheet: 1.82% Coil/Unstructured: 25.45%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF14333	DUF4389	6.29
PF02909	TetR_C_1	5.59
PF01569	PAP2	4.90
PF00144	Beta-lactamase	2.80
PF03706	LPG_synthase_TM	2.80
PF00106	adh_short	2.10
PF03551	PadR	2.10
PF01526	DDE_Tnp_Tn3	1.40
PF03795	YCII	1.40
PF00196	GerE	1.40
PF13492	GAF_3	0.70
PF08240	ADH_N	0.70
PF00690	Cation_ATPase_N	0.70
PF13683	rve_3	0.70
PF13546	DDE_5	0.70
PF01381	HTH_3	0.70
PF00005	ABC_tran	0.70
PF00589	Phage_integrase	0.70
PF13784	Fic_N	0.70
PF12146	Hydrolase_4	0.70
PF00378	ECH_1	0.70
PF13177	DNA_pol3_delta2	0.70
PF16884	ADH_N_2	0.70
PF00486	Trans_reg_C	0.70
PF12730	ABC2_membrane_4	0.70
PF13602	ADH_zinc_N_2	0.70
PF07859	Abhydrolase_3	0.70
PF08281	Sigma70_r4_2	0.70
PF13368	Toprim_C_rpt	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	5.59
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	2.80
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	2.80
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	2.80
COG2367	Beta-lactamase class A	Defense mechanisms [V]	2.80
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	2.10
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	2.10
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	2.10
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.40
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	1.40
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	0.70
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.64 %
Unclassified	root	N/A	43.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.64 %
Unclassified	root	N/A	43.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.64 %
Unclassified	root	N/A	43.36 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	51.75 %
Unclassified	root	N/A	43.36 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	43.36 %
Unclassified	root	N/A	43.36 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.36 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	26.57 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.70 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.36 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	4.90 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	2.80 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.80 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.70 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.70 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.70 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.70 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.36 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.90 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	2.80 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.80 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.70 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.70 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.70 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.36 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.90 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.10 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	0.70 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.70 %
Rhodococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus	0.70 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.70 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	0.70 %
unclassified Geodermatophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae	0.70 %
Blastococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	0.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.70 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.36 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.90 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.10 %
unclassified Blastococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus	0.70 %
Rhodococcus xishaensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus xishaensis	0.70 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.70 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.70 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	0.70 %
Streptacidiphilus carbonis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus carbonis	0.70 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.70 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.36 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.90 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.10 %
Blastococcus sp. URHD0036	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. URHD0036	0.70 %
Rhodococcus xishaensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus xishaensis	0.70 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.70 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.70 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	0.70 %
Streptacidiphilus carbonis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus carbonis	0.70 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.70 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_119806717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	780	Open in IMG/M
3300003368\|JGI26340J50214_10008042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3395	Open in IMG/M
3300003505\|JGIcombinedJ51221_10186170	Not Available	841	Open in IMG/M
3300004080\|Ga0062385_11263928	Not Available	507	Open in IMG/M
3300004092\|Ga0062389_100625966	Not Available	1243	Open in IMG/M
3300004121\|Ga0058882_1708816	Not Available	571	Open in IMG/M
3300005341\|Ga0070691_10227333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	991	Open in IMG/M
3300005363\|Ga0008090_15090277	Not Available	856	Open in IMG/M
3300005439\|Ga0070711_101518324	Not Available	585	Open in IMG/M
3300005529\|Ga0070741_10639368	Not Available	945	Open in IMG/M
3300005602\|Ga0070762_11053734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300005610\|Ga0070763_10412754	Not Available	761	Open in IMG/M
3300005718\|Ga0068866_10904325	Not Available	621	Open in IMG/M
3300005995\|Ga0066790_10019853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2939	Open in IMG/M
3300006059\|Ga0075017_100430151	Not Available	994	Open in IMG/M
3300006102\|Ga0075015_100082456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1586	Open in IMG/M
3300006172\|Ga0075018_10682379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	554	Open in IMG/M
3300006173\|Ga0070716_100400783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	986	Open in IMG/M
3300006176\|Ga0070765_100048649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3445	Open in IMG/M
3300006806\|Ga0079220_10174107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1214	Open in IMG/M
3300006914\|Ga0075436_101573119	Not Available	500	Open in IMG/M
3300009148\|Ga0105243_12629060	Not Available	543	Open in IMG/M
3300009174\|Ga0105241_12193395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. URHD0036	548	Open in IMG/M
3300009520\|Ga0116214_1051413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1494	Open in IMG/M
3300009522\|Ga0116218_1189344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus xishaensis	930	Open in IMG/M
3300009548\|Ga0116107_1021920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2496	Open in IMG/M
3300009552\|Ga0116138_1138399	Not Available	672	Open in IMG/M
3300009623\|Ga0116133_1002149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	5424	Open in IMG/M
3300009623\|Ga0116133_1019795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1666	Open in IMG/M
3300009630\|Ga0116114_1120764	Not Available	684	Open in IMG/M
3300009640\|Ga0116126_1145939	Not Available	798	Open in IMG/M
3300009644\|Ga0116121_1174521	All Organisms → cellular organisms → Bacteria → Terrabacteria group	681	Open in IMG/M
3300009700\|Ga0116217_10416856	Not Available	851	Open in IMG/M
3300009762\|Ga0116130_1036781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1577	Open in IMG/M
3300010154\|Ga0127503_10970478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2311	Open in IMG/M
3300010343\|Ga0074044_10036658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3421	Open in IMG/M
3300010379\|Ga0136449_100801165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1556	Open in IMG/M
3300011120\|Ga0150983_14992080	Not Available	783	Open in IMG/M
3300011120\|Ga0150983_15961527	Not Available	1607	Open in IMG/M
3300011404\|Ga0153951_1095302	Not Available	554	Open in IMG/M
3300012493\|Ga0157355_1011106	Not Available	708	Open in IMG/M
3300012507\|Ga0157342_1029710	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300012515\|Ga0157338_1022194	Not Available	748	Open in IMG/M
3300013104\|Ga0157370_11105860	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300014156\|Ga0181518_10145031	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300014158\|Ga0181521_10235398	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300014164\|Ga0181532_10014170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6031	Open in IMG/M
3300014164\|Ga0181532_10022838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4493	Open in IMG/M
3300014165\|Ga0181523_10101765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1725	Open in IMG/M
3300014165\|Ga0181523_10240986	Not Available	1035	Open in IMG/M
3300014165\|Ga0181523_10620791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300014200\|Ga0181526_10377303	All Organisms → cellular organisms → Bacteria → Terrabacteria group	901	Open in IMG/M
3300014491\|Ga0182014_10005403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	14194	Open in IMG/M
3300014491\|Ga0182014_10173586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1191	Open in IMG/M
3300014492\|Ga0182013_10002015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	27052	Open in IMG/M
3300014493\|Ga0182016_10766365	Not Available	538	Open in IMG/M
3300014838\|Ga0182030_10082467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4626	Open in IMG/M
3300014839\|Ga0182027_10507176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1316	Open in IMG/M
3300016750\|Ga0181505_10548863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	690	Open in IMG/M
3300016750\|Ga0181505_10889065	All Organisms → cellular organisms → Bacteria	1362	Open in IMG/M
3300017821\|Ga0187812_1027268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1959	Open in IMG/M
3300017821\|Ga0187812_1060122	Not Available	1270	Open in IMG/M
3300017822\|Ga0187802_10319122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	607	Open in IMG/M
3300017924\|Ga0187820_1096672	Not Available	846	Open in IMG/M
3300017926\|Ga0187807_1195939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300017926\|Ga0187807_1237993	Not Available	595	Open in IMG/M
3300017929\|Ga0187849_1020600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3717	Open in IMG/M
3300017932\|Ga0187814_10132971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	924	Open in IMG/M
3300017937\|Ga0187809_10013595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2660	Open in IMG/M
3300017937\|Ga0187809_10030770	Not Available	1715	Open in IMG/M
3300017942\|Ga0187808_10038299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2001	Open in IMG/M
3300017946\|Ga0187879_10022345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3895	Open in IMG/M
3300017946\|Ga0187879_10054209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2356	Open in IMG/M
3300017946\|Ga0187879_10090044	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1766	Open in IMG/M
3300017946\|Ga0187879_10096302	Not Available	1699	Open in IMG/M
3300017994\|Ga0187822_10193996	Not Available	674	Open in IMG/M
3300018013\|Ga0187873_1373144	Not Available	520	Open in IMG/M
3300018017\|Ga0187872_10322467	Not Available	670	Open in IMG/M
3300018019\|Ga0187874_10096692	Not Available	1291	Open in IMG/M
3300018024\|Ga0187881_10250682	Not Available	741	Open in IMG/M
3300018028\|Ga0184608_10451751	All Organisms → cellular organisms → Bacteria → Terrabacteria group	553	Open in IMG/M
3300018035\|Ga0187875_10084520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1817	Open in IMG/M
3300018038\|Ga0187855_10068157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2180	Open in IMG/M
3300018044\|Ga0187890_10142521	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1376	Open in IMG/M
3300018044\|Ga0187890_10617165	Not Available	611	Open in IMG/M
3300018046\|Ga0187851_10088883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus carbonis	1935	Open in IMG/M
3300018057\|Ga0187858_10426106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	820	Open in IMG/M
3300018058\|Ga0187766_11087883	Not Available	573	Open in IMG/M
3300018060\|Ga0187765_10115767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1478	Open in IMG/M
3300018060\|Ga0187765_10158007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1284	Open in IMG/M
3300018064\|Ga0187773_10029402	Not Available	2413	Open in IMG/M
3300020579\|Ga0210407_11271389	Not Available	551	Open in IMG/M
3300020581\|Ga0210399_10515807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	993	Open in IMG/M
3300020582\|Ga0210395_10496089	Not Available	919	Open in IMG/M
3300020583\|Ga0210401_10566825	Not Available	997	Open in IMG/M
3300020583\|Ga0210401_11099401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	653	Open in IMG/M
3300021078\|Ga0210381_10122032	All Organisms → cellular organisms → Bacteria → Terrabacteria group	864	Open in IMG/M
3300021171\|Ga0210405_10260546	Not Available	1372	Open in IMG/M
3300021178\|Ga0210408_10017796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5715	Open in IMG/M
3300021402\|Ga0210385_10298421	Not Available	1194	Open in IMG/M
3300021403\|Ga0210397_10011676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5306	Open in IMG/M
3300021404\|Ga0210389_11259456	Not Available	568	Open in IMG/M
3300021405\|Ga0210387_10413707	Not Available	1195	Open in IMG/M
3300021407\|Ga0210383_10821529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	795	Open in IMG/M
3300021407\|Ga0210383_11210943	Not Available	634	Open in IMG/M
3300021474\|Ga0210390_10193458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1720	Open in IMG/M
3300021474\|Ga0210390_10495901	Not Available	1029	Open in IMG/M
3300021474\|Ga0210390_10911919	All Organisms → cellular organisms → Bacteria → Terrabacteria group	722	Open in IMG/M
3300023068\|Ga0224554_1143124	Not Available	522	Open in IMG/M
3300023088\|Ga0224555_1148832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	679	Open in IMG/M
3300023101\|Ga0224557_1001528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	21962	Open in IMG/M
3300025504\|Ga0208356_1042206	Not Available	924	Open in IMG/M
3300025625\|Ga0208219_1023859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1752	Open in IMG/M
3300025914\|Ga0207671_10964217	Not Available	673	Open in IMG/M
3300025915\|Ga0207693_10642983	All Organisms → cellular organisms → Bacteria → Terrabacteria group	824	Open in IMG/M
3300026294\|Ga0209839_10010046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3998	Open in IMG/M
3300026381\|Ga0255357_1065746	Not Available	537	Open in IMG/M
3300027604\|Ga0208324_1002997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6196	Open in IMG/M
3300027824\|Ga0209040_10061194	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2234	Open in IMG/M
3300027855\|Ga0209693_10236638	Not Available	896	Open in IMG/M
3300027889\|Ga0209380_10783875	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300027911\|Ga0209698_10375163	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1115	Open in IMG/M
3300027911\|Ga0209698_10459880	Not Available	989	Open in IMG/M
3300029939\|Ga0311328_10961204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	559	Open in IMG/M
3300029952\|Ga0311346_10398396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1338	Open in IMG/M
3300029999\|Ga0311339_11081854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	744	Open in IMG/M
3300030598\|Ga0210287_1228330	Not Available	523	Open in IMG/M
3300030743\|Ga0265461_10252480	Not Available	1166	Open in IMG/M
3300031090\|Ga0265760_10210947	Not Available	659	Open in IMG/M
3300031234\|Ga0302325_13189763	Not Available	524	Open in IMG/M
3300031708\|Ga0310686_119831086	Not Available	524	Open in IMG/M
3300032160\|Ga0311301_10981451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1121	Open in IMG/M
3300032805\|Ga0335078_12011209	Not Available	618	Open in IMG/M
3300032892\|Ga0335081_11609123	Not Available	713	Open in IMG/M
3300032895\|Ga0335074_10004500	All Organisms → cellular organisms → Bacteria	19186	Open in IMG/M
3300032955\|Ga0335076_11199176	Not Available	643	Open in IMG/M
3300033755\|Ga0371489_0417995	Not Available	612	Open in IMG/M
3300033818\|Ga0334804_009415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3961	Open in IMG/M
3300033823\|Ga0334837_103655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	587	Open in IMG/M
3300033824\|Ga0334840_089315	Not Available	864	Open in IMG/M
3300033890\|Ga0334810_111716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	657	Open in IMG/M
3300034124\|Ga0370483_0059166	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1219	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.71%
Host-Associated	Host-Associated	6.29%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.55%
Aquatic	Environmental → Aquatic	39.16%
Plants	Host-Associated → Plants	5.59%
Fungi	Host-Associated → Fungi	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	45.45%
Freshwater	Environmental → Aquatic → Freshwater	34.97%
Peat	Environmental → Terrestrial → Peat	9.09%
Sediment	Environmental → Aquatic → Sediment	4.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.10%
Mycelium	Host-Associated → Fungi → Mycelium	0.70%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	33.57%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	22.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.59%
Loam	Environmental → Terrestrial → Soil → Loam	10.49%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.10%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.70%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.70%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	20.28%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.59%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.09%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.69%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.99%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.99%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.59%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.10%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.40%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.70%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.70%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.70%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.70%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.70%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.59%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	11.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.59%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.59%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	5.59%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.20%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.50%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	3.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.50%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.50%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.40%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.40%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.40%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.40%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.40%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.40%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.70%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.70%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.70%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.70%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.70%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.70%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.70%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.70%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.70%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.70%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.70%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009548	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011404	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ035 MetaG	Host-Associated	Open in IMG/M
3300012493	Unplanted soil (control) microbial communities from North Carolina - M.Soil.10.yng.090610	Environmental	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300023068	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 20-24	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300025504	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025625	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026381	Peat soil microbial communities from Stordalen Mire, Sweden - G.F.S.T-25	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030598	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO747-VDE048SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300033818	Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-M	Environmental	Open in IMG/M
3300033823	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S3 30-34	Environmental	Open in IMG/M
3300033824	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S2 5-9	Environmental	Open in IMG/M
3300033890	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-1-M	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1018428221	3300002245	Forest Soil	MKFGHDTVMGVVLVVAGVLTFASTRSPSKTVRILALIGAAATIIIGLLLFFGLA*
C688J35102_1198067172	3300002568	Soil	VEFGHDTLMGAALVISGGLTFAYTRSASRPLLILVVIGAVATIVIGLLLFFGLA*
JGI26340J50214_100080423	3300003368	Bog Forest Soil	MAMDWHDTLMGSVLVISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA*
JGIcombinedJ51221_101861702	3300003505	Forest Soil	MAASDLSVLLPVSDARPSSRIRGDAMAMDWHDTLMGSVLVISGGLTFAYTRAASKILLILTLIGVAATILIGALLFFHLA*
Ga0062385_112639282	3300004080	Bog Forest Soil	RGGVMAMDWHDTFMGSVLVISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA*
Ga0062389_1006259661	3300004092	Bog Forest Soil	MAMDWHDTFMGSVLVISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA*
Ga0058882_17088162	3300004121	Forest Soil	MMAMDWHDTFMGSVLVISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA*
Ga0070691_102273332	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MKFGHDTLMGAALVISGGLAVAYTRGATRILLILTLIGAAVTLIIGVLLFFGLA*
Ga0008090_150902771	3300005363	Tropical Rainforest Soil	MKFGHDTLMGAALVISGGLTVAYTRAASRILLILTLIGAVVTLAIGVLLFFGLA*
Ga0070711_1015183242	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKFGHDALMGAALVISGGLAVAYTRGATRTLLILTLIGAAVTLVIGVLLFFGLA*
Ga0070741_106393681	3300005529	Surface Soil	MAMDWHDTLMGSVLVISGGLTFAYTRAASRILLILTLIGAAATFVIGVLL
Ga0070762_110537341	3300005602	Soil	MAMDWHDTLMGSALVISAGLTFAHTRAASRTLLILTVTGAAGTLVIGVLLFFHLA*
Ga0070763_104127542	3300005610	Soil	MAMDWHDTLMGSVLVISGGLTFAYIRAASRILLILTLIGAAATFLIGVLLFFHLA*
Ga0068866_109043252	3300005718	Miscanthus Rhizosphere	MKFGHDMLMGAALVISGGLAVAYTRGATRILLILTLIGAAVTLVIGVLLFFGLA*
Ga0066790_100198535	3300005995	Soil	MAMDWHDTLMGSVLVISGGLTFAYTRAASRILLILTITGAAATFVIGVLLFFHLA*
Ga0075017_1004301512	3300006059	Watersheds	MAMDWHDTFMGSVLVISGGLTFAYTRAVSKILLILTLIGAAATIVIGVLLFFHLA*
Ga0075015_1000824561	3300006102	Watersheds	GSVLVISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA*
Ga0075018_106823791	3300006172	Watersheds	IRGGVMAMDWHDTFMGPVLVISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA
Ga0070716_1004007832	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKFGHDTLMGAALVISGGLTVAYTRAASRILLILTLIGAAVTLVIGVLLFFGLA*
Ga0070765_1000486496	3300006176	Soil	MAMDWHDTLMGSVLVISGGLTFAYIRAASRILLILTLTGAAATFVVGVLLFFHLA*
Ga0079220_101741072	3300006806	Agricultural Soil	MKFGHDTLMGAALVISGGLAVAYTRGATRILLILTLIGAAVTLVIGVLLFFGLA*
Ga0075436_1015731191	3300006914	Populus Rhizosphere	GAALVISGGLAVAYTRGATRILLILTLIGAAVTLVIGVLLFFGLA*
Ga0105243_126290602	3300009148	Miscanthus Rhizosphere	MKFGHDTLMGAALVISGGLAVAYTRGATRILLILTLIGAAVTLINGVLLFFGLA*
Ga0105241_121933951	3300009174	Corn Rhizosphere	MKFGHDTLMGAALVISGGLAVAYTRGATRILLILTLIGAAVTLIIGVLLFFG
Ga0116214_10514131	3300009520	Peatlands Soil	MAMDWHDTLMGSVLVISGGLTFAYTRAVSKILLILTLIGAAATIVIGVLLFFHLA*
Ga0116218_11893442	3300009522	Peatlands Soil	MAMDWHDTLMGSVLVISGGLAFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA*
Ga0116107_10219204	3300009548	Peatland	MAMDWHDTLMGSLLIISGGSTFAYTRAASKILLILTLIGVAATIVIGVLLFFHLA*
Ga0116138_11383991	3300009552	Peatland	MAMDWHDTLMGSVLVISGGLTFAYTRTASRILLILTLIGAAATFVIGVLLFFHLA*
Ga0116133_10021495	3300009623	Peatland	MAMDWHDTLMGSVLVISGGLTFAYIRAASKILLILALIGAAATFVIGVLLFFHLA*
Ga0116133_10197951	3300009623	Peatland	MAMDWHDTLMGSVLVISGGLTFAYIRAASRILLILTLIGAAATFVIGVLLFFHLA*
Ga0116114_11207641	3300009630	Peatland	MAMDWHDTLMGSVLVISGGLTFAYTRAASRILLILTLIGAAATFVIGVLLFFHLA*
Ga0116126_11459391	3300009640	Peatland	LDDYHRKRTFVMAMDWHDTLMGSVLVISGGLTFAYTRAASRILLILTLIGAAATFVIGVLLFFHLA*
Ga0116121_11745211	3300009644	Peatland	MAVDWHDTLMGSVLVISAGLTFAYTRATSRILLILTLIGAAATFVIGVLLFFHLA*
Ga0116217_104168562	3300009700	Peatlands Soil	PCSLPVSGARLASRIRGGVMAMDWHDTLMGSVLVISGGLTFAYTRAVSKILLILTLIGAAATIVIGVLLFFHLA*
Ga0116130_10367812	3300009762	Peatland	MAMDLHDTLMGSVLVISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA*
Ga0127503_109704785	3300010154	Soil	MKFGHDTLMGAALVISGGLAVAYTRGASRILLILTLIGAAVTLVIGVLLFFGLA*
Ga0074044_100366583	3300010343	Bog Forest Soil	MAMDWHDTLMGSVLVISGGLTFAYTRAASKILLILTLIGVAATIVIGVLLFFHLA*
Ga0136449_1008011651	3300010379	Peatlands Soil	MAMDWHDTLMGSVLVISAGLTFAYTRAASRILLILTLTGAAATFVIGVLLFFHLA*
Ga0150983_149920802	3300011120	Forest Soil	MAMDWHDTLMGSVLVISSGLTFAYTRAASRILLVLTLTGAAATLVIGVLLFFHLA*
Ga0150983_159615273	3300011120	Forest Soil	MDWHDTFMGSVLVISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA*
Ga0153951_10953022	3300011404	Attine Ant Fungus Gardens	MTATGKDIIMAMDWHDTLMGSVLVISGVLTFAYTRAASRILLILTLIGAAATFVIGVLLFFHFA*
Ga0157355_10111061	3300012493	Unplanted Soil	MKFRHDTLMGAALVISGALAVAYTRGATRILLILTLIGAAVTLVIGVLLFFGLA*
Ga0157342_10297101	3300012507	Arabidopsis Rhizosphere	MKFGHDTLMGAALVISGALAVAYTRGATRILLILTLIGAAVTLVIGVLLFFGLA*
Ga0157338_10221941	3300012515	Arabidopsis Rhizosphere	MKFGHDTLMGAALVISGALAVAYTRGATRILLILTLIGAAVTLVIG
Ga0157370_111058601	3300013104	Corn Rhizosphere	TLMGAALVISGGLAVAYTRGATRILLILTLIGAAVTLIIGVLLFFGLA*
Ga0181518_101450312	3300014156	Bog	MAMDWHDTLMGSMLIISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA*
Ga0181521_102353981	3300014158	Bog	QEKGDAMAMDWHDTLMGSLLIISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA*
Ga0181532_100141703	3300014164	Bog	MDWHDTLMGSVLVISGVLTFAYTRSASRILLRLTLIGAAATFVIGVLLFFHLA*
Ga0181532_100228383	3300014164	Bog	MDWHDTLMGSVLVISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA*
Ga0181523_101017652	3300014165	Bog	MAMDWHDTLMGSVLVISGVLTFAYTRSASRILLRLTLIGAAATFVIGVLLFFHLA*
Ga0181523_102409862	3300014165	Bog	MDWHDTLMGSVLVISGGLTFAYIRAASRILLILTLIGAAATFVIGVLLFFHLA*
Ga0181523_106207911	3300014165	Bog	MDWHDTLMGSVLVISAGLTFAYTRATSRILLILTLTGAAATFVIGVLLFF
Ga0181526_103773032	3300014200	Bog	MRIASNCEQERGDAMAMDWHDTLMGSVLVISGGLTSAYTRAASKILLILTLIGAAATIVIGVLLFFHLA*
Ga0182014_100054038	3300014491	Bog	MACEQERGDAMAMDWHDTLMGSVLVISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA*
Ga0182014_101735862	3300014491	Bog	MGSLLIFSGGSTFAYTRAASKILLILTLIGVAATIVIGVLLFFHLA*
Ga0182013_1000201520	3300014492	Bog	MAMDWHDTLMGSVLVISGGLTFAYIRAASKVLLILTLIGAAATIVIGVLLFFHLA*
Ga0182016_107663651	3300014493	Bog	GDAMAMDWHDTLMGSVLVISGGLTFAYIRAASKVLLILTLIGAAATIVIGVLLFFHLA*
Ga0182030_100824675	3300014838	Bog	MAMDWHDTLMGSVLVISGGLTFAYTRSTLKILLMLTLIGVAATIFIGVLLFFHLA*
Ga0182027_105071762	3300014839	Fen	MGSLLIISGGSTFAYTRAASKILLILTLIGVAATIVIGVLLFFHLA*
Ga0181505_105488632	3300016750	Peatland	MAMDWHDTLMGSVLVISGVLTFAYTRSASRILLRLTLIGAAATFVIGVLLFFHLA
Ga0181505_108890651	3300016750	Peatland	PPEQDVVMAMDWHDTLMGSVLVISGGLTFAYTRAASRILLILTLIGAAATFVIGVLLFFHLA
Ga0187812_10272682	3300017821	Freshwater Sediment	MAMDWHDTLMGSVLVISAGLTFAYTRAASRILLILTLIGAAATFIIGVLLFFHLA
Ga0187812_10601222	3300017821	Freshwater Sediment	MAMDWHDTLMGSVLVISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA
Ga0187802_103191222	3300017822	Freshwater Sediment	SLSVSDARLASRIRGDAMAMDWHDTLMGSVLVISGGPTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA
Ga0187820_10966722	3300017924	Freshwater Sediment	MAMDWHDTFMGSVLVISGGLTFAYTRAVSKILLILTLIGAAATIVIGVLLFFHLA
Ga0187807_11959391	3300017926	Freshwater Sediment	MAMDWHDTLMGSVLVISGGLTFAYIRAASRILLILTLTGAAATFVIGVLLFFHLA
Ga0187807_12379932	3300017926	Freshwater Sediment	MAMDWHDTFMGSVLVISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA
Ga0187849_10206002	3300017929	Peatland	MAMDWHDTLMGSLLIISGGSTFAYTRAASKILLILTLIGVAATIVIGVLLFFHLA
Ga0187814_101329712	3300017932	Freshwater Sediment	MAMDWHDTLMGSVLVISAGLTFAYTRAASRILLILALTGAAATFVIGVLL
Ga0187809_100135951	3300017937	Freshwater Sediment	SDVRLASRIRGDAMAMDLHDTLMGSVLVISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA
Ga0187809_100307702	3300017937	Freshwater Sediment	MAMDLHDTFMGSVLVISGALTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA
Ga0187808_100382992	3300017942	Freshwater Sediment	MAMDWHDTLMGSVLVISAGLTFAYTRAASRILLILTLTGAAATFIIGVLLFFHLA
Ga0187879_100223455	3300017946	Peatland	MAMDWHDTLMGSVLVISGGLTFAYTRTASRILLILTLIGAAATFVIGVLLFFHLA
Ga0187879_100542093	3300017946	Peatland	MAMDWHDTLMGSVLVISGGLTFAYIRAASKILLILALIGAAATFVIGVLLFFHLA
Ga0187879_100900442	3300017946	Peatland	MAMDWHDTLMGSVLVISGGLTFAYIRAASRILLILTLIGAAATFVIGVLLFFHLA
Ga0187879_100963021	3300017946	Peatland	MAMDWHDTLMGSVLVISGGLTFAYTRAASRILLILTLIGAAATFVIGVLLFFHLA
Ga0187822_101939962	3300017994	Freshwater Sediment	MAMDWHDTLMGSVLVISAGLTFAYTRAAASRILLILTLTGAAATFVIGVLLFFHLA
Ga0187873_13731441	3300018013	Peatland	SQERGDAMAMDWHDTLMGSLLIISGGSTFAYTRAASKILLILTLIGVAATIVIGVLLFFHLA
Ga0187872_103224671	3300018017	Peatland	MAMDWHDTLMGSLLIISGGSTFTYTRAASKILLILTLIGVAATIVIGVLLFFHLA
Ga0187874_100966921	3300018019	Peatland	RQVISQERGDAMAMDWHDTLMGSLLIISGGSTFAYTRAASKILLILTLIGVAATIVIGVLLFFHLA
Ga0187881_102506821	3300018024	Peatland	MAMDWHDTLMGSLLIISGGSTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA
Ga0184608_104517512	3300018028	Groundwater Sediment	MEIGGHDTLMGAALFASGALTIAYIRAASNTLKILTLIGAAATLVIGFLLFFHLA
Ga0187875_100845202	3300018035	Peatland	MAMDLHDTLMGSVLVISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA
Ga0187855_100681572	3300018038	Peatland	MAMDWHDTLLGSVLVISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA
Ga0187890_101425211	3300018044	Peatland	TFVMAMDWHDTLMGSVLVISGGLTFAYTRTASRILLILTLIGAAATFVIGVLLFFHLA
Ga0187890_106171652	3300018044	Peatland	MAMDWHDTLMGSVLVISSGLTFAYIRAASRILLILTLIGAAATFVIGVLLFFHLA
Ga0187851_100888833	3300018046	Peatland	MAMDWHDTLMGSVLVISGGLTFAYTRAALKILLMLTLIGVAATIFIGVLLFFHLA
Ga0187858_104261062	3300018057	Peatland	MAMDWHDTLMGSMLIISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA
Ga0187766_110878831	3300018058	Tropical Peatland	MAMDLHDTLMGSVLVISGGLTFAYTRVASKILLILTLIGAAATIVIGVLLFFHLA
Ga0187765_101157671	3300018060	Tropical Peatland	AMAMDLHDTLMGSVLVISGGLTFAYTRVASKILLILTLIGAAATIVIGVLLFFHLA
Ga0187765_101580072	3300018060	Tropical Peatland	MAMDLHDTLMGSVLVISGGLTFAYTKVASRILLILTLIGAAATIVIGVLLFFHLA
Ga0187773_100294022	3300018064	Tropical Peatland	MKFGHDTLMGAALVISGGLTVAYTRATSRILLILNLIGAAVTIVIGVLLFFGLA
Ga0210407_112713891	3300020579	Soil	MDWHDTFMGSVLVISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA
Ga0210399_105158072	3300020581	Soil	MAMDLHDTLMGSVLVISAGLTFAYTRAASRILLILTLTGAAATFVIGVLLFFHLA
Ga0210395_104960892	3300020582	Soil	MAMDWHDTFMGSVLVLSGGLTFAYTRAVSKILLILTLIGAAATIVIGVLLFFHLA
Ga0210401_105668252	3300020583	Soil	MAMDWHDTLMGSVLVISGGLTFAYTRAAAKILLILTLLGAAATIVIGVLLFFHLA
Ga0210401_110994011	3300020583	Soil	SVLVISGGPAFAYTRAAAKILLILTLLGAAATIVIGVLLFFHLA
Ga0210381_101220322	3300021078	Groundwater Sediment	MEIGGHDTLMGAALLASGALTIAYIRAASNTLKILTLIGAAATLVIGFLLFFHLA
Ga0210405_102605462	3300021171	Soil	MAMDWHDTFIGSVLVISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA
Ga0210408_100177966	3300021178	Soil	MAMAMDWHDTFMGSVLVISGGPAFAYTRAAAKILLILTLLGAAATIVIGVLLFFHLA
Ga0210385_102984211	3300021402	Soil	MDWHDTLMGSVLVISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA
Ga0210397_100116764	3300021403	Soil	MAMDWHDTLMGSVLVISGGLTFAYTRAVSKILLILTLIGAAATIVIGVLLFFHLA
Ga0210389_112594562	3300021404	Soil	MDWHDILMGSVLVSSSGLTFAYTRAASRKLLILTLIGAAAAFVIGVLLFFHLA
Ga0210387_104137071	3300021405	Soil	MDWHDTFMGSVLVISGGLTFAYTRAASRILLILTLIGVLLFFHLA
Ga0210383_108215291	3300021407	Soil	TFSVLAIGQRRTACEQERGDAMAMDWHDTLMGSVLVISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA
Ga0210383_112109431	3300021407	Soil	MAMDLHDTLMGSVLVISAGLTFAYTRAASRILLILTLTGAAATFIIGLLLFFHLA
Ga0210390_101934581	3300021474	Soil	AMAMDWHDTLMGSVLVISGGLTFAYTRAASKILLILTLIGVAATILIGALLFFHLA
Ga0210390_104959012	3300021474	Soil	MAMDWHDTLMGSVLVISSGLTFAYTRAASRILLVLTLTGAAATLVIGVLLFFHLA
Ga0210390_109119192	3300021474	Soil	MDLHDTLMGSVLVISGGLTFAYTRAASKILLILTLIGVAATIVIGLL
Ga0224554_11431241	3300023068	Soil	TACEQERGDTMAMDLHDTLMGSVLVISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA
Ga0224555_11488322	3300023088	Soil	QRRTACEQERGDTMAMDLHDTLMGSVLVISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA
Ga0224557_10015284	3300023101	Soil	MAMDWHDTLMGSVLVISGGLTFAYIRAASKVLLILTLIGAAATIVIGVLLFFHLA
Ga0208356_10422061	3300025504	Arctic Peat Soil	MAMDWHDTLMGSVLVISSGLTVAYIRAGSRILLILTLIGAAATFVIGVLLFFHLA
Ga0208219_10238593	3300025625	Arctic Peat Soil	MAMDWHDTLMGSVLVISSGLTFAYIRAGSRILLRLTIIGAAATFVIGVLLFFHLA
Ga0207671_109642172	3300025914	Corn Rhizosphere	MKFGHDTLMGAALVISGGLAVAYTRGATRILLILTLIGAAVTLIIGVLLFFGLA
Ga0207693_106429832	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKFGHDTLMGAALVISGGLTVAYTRAASRILLILTLIGAAVTLVIGVLLFFGLA
Ga0209839_100100464	3300026294	Soil	MAMDWHDTLMGSVLVISGGLTFAYTRAASRILLILTITGAAATFVIGVLLFFHLA
Ga0255357_10657461	3300026381	Soil	VGQRRTACEQERGDTMAMDLHDTLMGSVLVISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA
Ga0208324_10029976	3300027604	Peatlands Soil	MAMDWHDTLMGSVLVISGGLAFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA
Ga0209040_100611943	3300027824	Bog Forest Soil	GQRRTACEQERGDAMAMDWHDTLMGSVLVISGGLTFAYIRAASKILLILTLIGAAATIVIGVLLFFHLA
Ga0209693_102366382	3300027855	Soil	MAMDWHDTLMGSVLVISGGLTFAYIRAASRILLILTLTSAAATFVIGVLLFFHLA
Ga0209380_107838751	3300027889	Soil	MAMDWHDTLMGSVLVISAGLTFAHTRAASRTLLILAVTGAAGTLVIGVLLFFHLA
Ga0209698_103751632	3300027911	Watersheds	AMDWHDTLMGSVLVISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA
Ga0209698_104598801	3300027911	Watersheds	MAMDWHDTLMGSVLVISGGLTFAYTRAASKILLILTLIGVAATILIGVLLFFHLA
Ga0311328_109612041	3300029939	Bog	MAVDWHDTLMGSVLVISAGLTFAYTRATSRILLILTLTGAAATFVIGVLLFFTLPEP
Ga0311346_103983961	3300029952	Bog	MAVDWHDTLMGSVLVISAGLTFAYTRATSRILLILTLTGAAATFVIGV
Ga0311339_110818542	3300029999	Palsa	MAMDWHDTLMGSVLIISAGLTFAYARAASRTLLILALTGAAGALVIGVLLFFHLA
Ga0210287_12283302	3300030598	Soil	GDAMAMDLHDTLMGSELVISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA
Ga0265461_102524802	3300030743	Soil	DIWRYLTFSVLAVGQRRTACEQERGDAMAMDWHDTLMGAVLVISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA
Ga0265760_102109472	3300031090	Soil	MDLHDTLMGSVLVISGGLTFAYTRAASKTLLILTLIGAAATIVIGVLLFFHLA
Ga0302325_131897632	3300031234	Palsa	MTDTLMGSVLVISAGLTFAYTRATSRILLILTLTGAAATFVIGVLLFFHLA
Ga0310686_1198310862	3300031708	Soil	MAMDWHDTLMGSVLVISGVLTFAYIRAASRILLILTLIGAAATFVIGVLLFFHLA
Ga0311301_109814511	3300032160	Peatlands Soil	MAMDWHDTLMGSVLVISAGLTFAYTRAASRILLILTLTGAAATFVIGVLLFFHLA
Ga0335078_120112092	3300032805	Soil	MKFGHDTLMGAALVISGGLTVAYTRAASRILLILTLIGAVVTLAIGVLLFFGLA
Ga0335081_116091232	3300032892	Soil	MKFGHDTLMGAALVISGGLTVAYTRVASRILLILTLIGATVTLVIGVLLFFGLA
Ga0335074_1000450021	3300032895	Soil	MLGDAMVMDWHDTLMGSVLVIPGGPRFAYTRAASKILLILTLFGVAATIVIGVLLFFHLA
Ga0335076_111991761	3300032955	Soil	MAMDWHDTFMGSVLVISGGLTFAYTRAASKILLILTLIGAAATIVIGVL
Ga0371489_0417995_338_547	3300033755	Peat Soil	MRIASNCEQERGDAMAMDWHDTLMGSVLVISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA
Ga0334804_009415_2081_2248	3300033818	Soil	MAMDWHDTLMGSVLVISGGLTFAYTRSTLKILLMLTLIGVAATIFIGVLLFFHLA
Ga0334837_103655_372_539	3300033823	Soil	MALDWHDTLMGSLLIFSGGSTFAYTRAASKILLILTLIGVAATIVIGVLLFFHLA
Ga0334840_089315_1_141	3300033824	Soil	MAMDWHDTLMGSVLVISGGLTFAYIRAASKVLLILTLIGAAATIVIG
Ga0334810_111716_18_185	3300033890	Soil	MAMDLHDTSMGSVLVISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA
Ga0370483_0059166_536_757	3300034124	Untreated Peat Soil	VLAVGQRRTACEQERGDAMAMDWHDTLMGSVLVISGGLTFAYTRAASKILLILTLIGAAATIVIGVLLFFHLA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052163

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences