Metagenome / Metatranscriptome Family F052119

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052119
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	52 residues
Representative Sequence	MHASIWKFAGDPDELLRRYDAMLDEIPRARMRLHVCLXAPDGIVLVDTCPT
Number of Associated Samples	123
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.74 %
% of genes near scaffold ends (potentially truncated)	83.92 %
% of genes from short scaffolds (< 2000 bps)	87.41 %
Associated GOLD sequencing projects	115
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.315 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (18.881 % of family members)
Environment Ontology (ENVO)	Unclassified (35.664 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.846 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.99% β-sheet: 25.32% Coil/Unstructured: 55.70%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF01425	Amidase	11.19
PF00440	TetR_N	4.90
PF07883	Cupin_2	4.90
PF12840	HTH_20	4.20
PF00155	Aminotran_1_2	2.80
PF01575	MaoC_dehydratas	2.80
PF13470	PIN_3	2.10
PF01402	RHH_1	1.40
PF08327	AHSA1	1.40
PF11954	DUF3471	0.70
PF02899	Phage_int_SAM_1	0.70
PF06265	YutD-like	0.70
PF00171	Aldedh	0.70
PF04014	MazE_antitoxin	0.70
PF00069	Pkinase	0.70
PF00999	Na_H_Exchanger	0.70
PF02566	OsmC	0.70
PF09234	DUF1963	0.70
PF00383	dCMP_cyt_deam_1	0.70
PF05977	MFS_3	0.70
PF01569	PAP2	0.70
PF10400	Vir_act_alpha_C	0.70
PF13561	adh_short_C2	0.70
PF00196	GerE	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	11.19
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.80
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.70
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.70
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.70
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.70
COG4470	Uncharacterized conserved protein YutD, DUF1027 family	Function unknown [S]	0.70
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.70
COG3878	Uncharacterized conserved protein YwqG, DUF1963 family	Function unknown [S]	0.70
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.70
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.70
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.70
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.70
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.70
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.70
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.70
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.70

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.31 %
Unclassified	root	N/A	14.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.31 %
Unclassified	root	N/A	14.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.31 %
Unclassified	root	N/A	14.69 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	59.44 %
Unclassified	root	N/A	14.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.40 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	56.64 %
Unclassified	root	N/A	14.69 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	49.65 %
Unclassified	root	N/A	14.69 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2.80 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.70 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.70 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	43.36 %
Unclassified	root	N/A	14.69 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.10 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.40 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.70 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.70 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.70 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.70 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	43.36 %
Unclassified	root	N/A	14.69 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	2.10 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1.40 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.70 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.70 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.70 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.70 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	43.36 %
Unclassified	root	N/A	14.69 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2.10 %
Smaragdicoccus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Smaragdicoccus	0.70 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.70 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.70 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.70 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.70 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	43.36 %
Unclassified	root	N/A	14.69 %
Bradyrhizobium sp. SRL28	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRL28	0.70 %
Smaragdicoccus niigatensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Smaragdicoccus → Smaragdicoccus niigatensis	0.70 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.70 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples	0.70 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.70 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.70 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	43.36 %
Unclassified	root	N/A	14.69 %
Solirubrobacter sp. CPCC 204708	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	0.70 %
uncultured Pseudonocardia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples → uncultured Pseudonocardia sp.	0.70 %
Bradyrhizobium sp. SRL28	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRL28	0.70 %
Smaragdicoccus niigatensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Smaragdicoccus → Smaragdicoccus niigatensis	0.70 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.70 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105380343	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300000956\|JGI10216J12902_109484136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	531	Open in IMG/M
3300002562\|JGI25382J37095_10159158	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300002908\|JGI25382J43887_10326432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300004092\|Ga0062389_101819950	Not Available	788	Open in IMG/M
3300004114\|Ga0062593_101129582	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300004156\|Ga0062589_102506307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300004479\|Ga0062595_102501036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	515	Open in IMG/M
3300005169\|Ga0066810_10122573	Not Available	597	Open in IMG/M
3300005177\|Ga0066690_10146188	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300005181\|Ga0066678_10589884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	739	Open in IMG/M
3300005184\|Ga0066671_10652518	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300005336\|Ga0070680_100618139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	930	Open in IMG/M
3300005337\|Ga0070682_100699304	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	813	Open in IMG/M
3300005338\|Ga0068868_101864754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M
3300005339\|Ga0070660_100133050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1991	Open in IMG/M
3300005354\|Ga0070675_100723944	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300005437\|Ga0070710_10070295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2016	Open in IMG/M
3300005446\|Ga0066686_10252209	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300005446\|Ga0066686_11079613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Smaragdicoccus → Smaragdicoccus niigatensis	517	Open in IMG/M
3300005468\|Ga0070707_101746660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300005535\|Ga0070684_101544388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	626	Open in IMG/M
3300005540\|Ga0066697_10791084	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300005546\|Ga0070696_100660852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	848	Open in IMG/M
3300005554\|Ga0066661_10201847	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300005558\|Ga0066698_10908688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300005563\|Ga0068855_100627505	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300005566\|Ga0066693_10088071	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300005568\|Ga0066703_10761304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300005569\|Ga0066705_10507502	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300005569\|Ga0066705_10757835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300005576\|Ga0066708_10409417	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300005576\|Ga0066708_10735848	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300005578\|Ga0068854_101329286	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300005614\|Ga0068856_100958350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	874	Open in IMG/M
3300005844\|Ga0068862_100721705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	967	Open in IMG/M
3300005844\|Ga0068862_101939772	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300006032\|Ga0066696_10955362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300006034\|Ga0066656_10097905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1777	Open in IMG/M
3300006173\|Ga0070716_101743042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300006581\|Ga0074048_12317015	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300006755\|Ga0079222_11644728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	612	Open in IMG/M
3300006791\|Ga0066653_10671894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300006794\|Ga0066658_10079482	All Organisms → cellular organisms → Bacteria	1494	Open in IMG/M
3300006844\|Ga0075428_101145226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	821	Open in IMG/M
3300009012\|Ga0066710_103184769	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300009089\|Ga0099828_11158043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	686	Open in IMG/M
3300009093\|Ga0105240_11461200	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300009137\|Ga0066709_103351086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	582	Open in IMG/M
3300009137\|Ga0066709_103448334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300009137\|Ga0066709_104275701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300009176\|Ga0105242_10452162	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300010041\|Ga0126312_10923239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M
3300010229\|Ga0136218_1022280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300010303\|Ga0134082_10089695	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300010304\|Ga0134088_10239741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	871	Open in IMG/M
3300010326\|Ga0134065_10094881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	983	Open in IMG/M
3300010333\|Ga0134080_10191605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	882	Open in IMG/M
3300010336\|Ga0134071_10291476	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300010364\|Ga0134066_10110630	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300010400\|Ga0134122_11532486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	687	Open in IMG/M
3300010401\|Ga0134121_11756306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	645	Open in IMG/M
3300011269\|Ga0137392_10267028	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300012198\|Ga0137364_10642618	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300012198\|Ga0137364_10738416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	743	Open in IMG/M
3300012201\|Ga0137365_10425937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	978	Open in IMG/M
3300012205\|Ga0137362_10543787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1003	Open in IMG/M
3300012359\|Ga0137385_10467330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1070	Open in IMG/M
3300012361\|Ga0137360_10965156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	735	Open in IMG/M
3300012362\|Ga0137361_11594008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300012582\|Ga0137358_10748672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	653	Open in IMG/M
3300012683\|Ga0137398_10663716	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300012924\|Ga0137413_11722053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300012960\|Ga0164301_10725588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	751	Open in IMG/M
3300012961\|Ga0164302_10310960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1034	Open in IMG/M
3300012972\|Ga0134077_10442112	All Organisms → cellular organisms → Bacteria → Terrabacteria group	568	Open in IMG/M
3300012984\|Ga0164309_10629677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	842	Open in IMG/M
3300012984\|Ga0164309_10662207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	823	Open in IMG/M
3300012987\|Ga0164307_11063740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300013102\|Ga0157371_11027724	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300013307\|Ga0157372_12526526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300013308\|Ga0157375_11458559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	807	Open in IMG/M
3300013501\|Ga0120154_1124297	All Organisms → cellular organisms → Bacteria → Terrabacteria group	587	Open in IMG/M
3300014166\|Ga0134079_10522844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300014255\|Ga0075320_1075189	Not Available	639	Open in IMG/M
3300014326\|Ga0157380_11087914	All Organisms → cellular organisms → Bacteria → Terrabacteria group	838	Open in IMG/M
3300014497\|Ga0182008_10412221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	728	Open in IMG/M
3300015242\|Ga0137412_10206591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRL28	1567	Open in IMG/M
3300015264\|Ga0137403_11236564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300015356\|Ga0134073_10371533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300017654\|Ga0134069_1093592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	976	Open in IMG/M
3300018032\|Ga0187788_10082197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1141	Open in IMG/M
3300018433\|Ga0066667_10512612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	990	Open in IMG/M
3300018433\|Ga0066667_10652247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	880	Open in IMG/M
3300018468\|Ga0066662_11535968	All Organisms → cellular organisms → Bacteria → Terrabacteria group	693	Open in IMG/M
3300018468\|Ga0066662_11943526	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300018468\|Ga0066662_12052829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599	Open in IMG/M
3300018468\|Ga0066662_12319820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	564	Open in IMG/M
3300018468\|Ga0066662_12429617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300018468\|Ga0066662_12920083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300020081\|Ga0206354_10094981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1021	Open in IMG/M
3300024317\|Ga0247660_1063686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300025878\|Ga0209584_10137710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	916	Open in IMG/M
3300025913\|Ga0207695_10445420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1178	Open in IMG/M
3300025934\|Ga0207686_10531136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	917	Open in IMG/M
3300026035\|Ga0207703_10185289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1839	Open in IMG/M
3300026116\|Ga0207674_10696882	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300026343\|Ga0209159_1286375	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300026529\|Ga0209806_1221566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	645	Open in IMG/M
3300026538\|Ga0209056_10472357	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300026540\|Ga0209376_1291799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300026550\|Ga0209474_10298285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	952	Open in IMG/M
3300026552\|Ga0209577_10470362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	860	Open in IMG/M
3300028379\|Ga0268266_10202564	Not Available	1817	Open in IMG/M
3300028563\|Ga0265319_1011896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3540	Open in IMG/M
3300028807\|Ga0307305_10524082	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300028812\|Ga0247825_11156840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	564	Open in IMG/M
3300031713\|Ga0318496_10816501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300031726\|Ga0302321_103068366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples → uncultured Pseudonocardia sp.	545	Open in IMG/M
3300031938\|Ga0308175_102817885	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300031938\|Ga0308175_103204870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300031996\|Ga0308176_12137786	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300031996\|Ga0308176_12445280	Not Available	557	Open in IMG/M
3300032074\|Ga0308173_11724049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	590	Open in IMG/M
3300032829\|Ga0335070_11895424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300033500\|Ga0326730_1068214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	670	Open in IMG/M
3300033551\|Ga0247830_10527960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	930	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.02%
Host-Associated	Host-Associated	20.28%
Engineered	Engineered	0.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.32%
Plants	Host-Associated → Plants	20.28%
Aquatic	Environmental → Aquatic	0.70%
Lab Enrichment	Engineered → Lab Enrichment	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.49%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.79%
Peat	Environmental → Terrestrial → Peat	1.40%
Freshwater	Environmental → Aquatic → Freshwater	0.70%
Unclassified	Engineered → Lab Enrichment → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.69%
Loam	Environmental → Terrestrial → Soil → Loam	6.29%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.40%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.70%
Unclassified	Engineered → Lab Enrichment → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	29.37%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.29%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.80%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.40%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.40%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.70%
Unclassified	Engineered → Lab Enrichment → Unclassified → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	18.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.19%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	10.49%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.10%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.40%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.40%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.40%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.70%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.70%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.70%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.70%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.70%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.70%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.70%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.70%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.70%
Soil	Engineered → Lab Enrichment → Unclassified → Unclassified → Unclassified → Soil	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010229	Soil microbial communities from Bangor area, North Wales, UK, treated with sorgoleone, replicate 1	Engineered	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014255	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D2	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024317	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK01	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028563	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG	Host-Associated	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033500	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF7AN SIP fraction	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1053803431	3300000364	Soil	MHASIWRFAGDPDELVSRYDAMVAEIPRDNMRLQLCLRGPAGIVLVDTCPSF
JGI10216J12902_1094841362	3300000956	Soil	MHASISTFRGDPDDLLARYDAMVADVPEASMRLHLCLRTDDGIVA
JGI25382J37095_101591581	3300002562	Grasslands Soil	MHASIWKFAGDPDELLRRYDAMLDEIPRARMRLHVCLRAPDGIVLVDTCPTKDVFESFARGDDFRALRERHGLP
JGI25382J43887_103264322	3300002908	Grasslands Soil	MHASIWKFAGDPDELLRRYDAMLDEIPRARMRLHVCLXAPDGIVLVDTCPT
Ga0062389_1018199501	3300004092	Bog Forest Soil	MHASIWKFDGNPDDLTRRYDAMAAEMPTGEFIAHLCLRAPDGIVIVDTCPSRDA
Ga0062593_1011295822	3300004114	Soil	MHASIWRFTGDPDELLAGYDSMLVDVPLESMRLHLCLRAPDGIVI
Ga0062589_1025063071	3300004156	Soil	MHASIWRFRGDPDELMRSYEALVAEIPAENMKLHVCLRAEDGIVLVDTCP
Ga0062595_1025010361	3300004479	Soil	MHASISHLRGEPDDLLRRYDALLAEIRAESMILHLCLRTSDGIIVVDTCPTKEIFE
Ga0066810_101225731	3300005169	Soil	VHASLWKFAGDPDDLLLRYDAMMGEIGAGNLRLHLCLRADDGILMLDA
Ga0066690_101461883	3300005177	Soil	MHASIWKFAGDPDELLRRYDAMLDEIPRARMRLHVCLGAPDGIVLVDTCPTKDVFEAFR
Ga0066678_105898842	3300005181	Soil	MHASMCKFAGNPVELLSHYDAMIEEIPRARMRLHLCLRADGIVLVDICPTKDVFESFARGDEPIRSSTASSNGPGTG
Ga0066671_106525181	3300005184	Soil	VHASLWRFRGDPDELLRRYEALLTDIPAENMRLHLCLKADDGIIIVDTCPSRDAFEGF
Ga0070680_1006181391	3300005336	Corn Rhizosphere	MYASIWRLEGEPDELARRYDAMTADVPRADMRLHLCLRADDGIVIVDTCPSREAEAC
Ga0070682_1006993041	3300005337	Corn Rhizosphere	MHASIWRFRGDPDELLRGYDAMLAEIPAANMKLHLCLRAPDGIVLVDTCPTQEAFDAFSSNPAL
Ga0068868_1018647542	3300005338	Miscanthus Rhizosphere	MHASISTFRGDPDDLLARYDAALAELGTASIDLQLCLRTDDGIVVVDTCPSR
Ga0070660_1001330505	3300005339	Corn Rhizosphere	MHASIWKFSGDPDELLRGYDAMVTEIPSANMRLHLCLRARDGIVLVDTCPTKEVFDAFVAGDGFRMLREKH
Ga0070675_1007239443	3300005354	Miscanthus Rhizosphere	VHASIWKFAGDPDDLLARYDAMVAEIPPGNLALHPCLRASDGIVLVDTCPSAEVFR
Ga0070710_100702951	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MHASIWTFTGDPDALLCRYDAMLADVPAANMRLHLCLRAPDGIVVI
Ga0066686_102522093	3300005446	Soil	MHASIWKFHGDADELLRRYDAMLEEIPRARMRLHVCLGAPDGIVLVDTCPTK
Ga0066686_110796131	3300005446	Soil	VHGSIWRFGGDPDELLRRYDAMVAEIPPANLRLHLCLQADDGIVLVDTCPSREVF
Ga0070685_100228461	3300005466	Switchgrass Rhizosphere	MHASIWRFRGDPDALLLRYDAITVEIPAAAMQAHLCLRAPD
Ga0070707_1017466601	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MHASIWRFRGDPDDLLRRYDALVAEIPRENMRLHLCLRAPDGILMVDTCPSKEVF
Ga0070684_1015443881	3300005535	Corn Rhizosphere	MHASIWRFRGDPDALLLRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTREAFESFSNGA
Ga0066697_107910841	3300005540	Soil	MHASIWKFAGDPDELLRRYDAMLDEIPRAKMRLHVCLGAPDGIVLVDTCPTKDVFESFARGDDFRALR
Ga0070696_1006608522	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MHASIWRFRGDPDALLRRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTREAF
Ga0070696_1017244471	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	LLMHASIWRFVGDPVDLLRRYDAMAAEIPRENLRLHLCLS
Ga0066661_102018471	3300005554	Soil	MHASIWKFAGDPDELLRRYDAMLDEIPGARMRLHVCLRAPDGIVLV
Ga0066698_109086881	3300005558	Soil	VHGSIWRFAGDPDELLRRHDAMVAEIPHANMRLHLCLRAADGIV
Ga0068855_1006275053	3300005563	Corn Rhizosphere	MHASIWKFRGDPDQLVRSYDAMMAEIPQANMKLHLCLRAPDGIVLVDTCPTAEV
Ga0066693_100880712	3300005566	Soil	MHASIWKFAGDPDELLRRYDAMLEEIPRARMRLHICLRVTDGIVFIDTCPTKEDFESFAH
Ga0066703_107613042	3300005568	Soil	MHASLWRFSGDPDDLLRRYDALVAEIPAANMRLHLCMRAPEGIVLVDTCPSEEAFQA
Ga0066705_100889233	3300005569	Soil	MHASIWRLHGDPKELLPRYDALVADIPRENMRLHL*
Ga0066705_105075021	3300005569	Soil	MHASIWKFHGDADELLRRYDAMLEEIPRARMRLHVCLRAPDGIVLVDTCPTRDVFESFARGDDFRALRE
Ga0066705_107578351	3300005569	Soil	MHASLWRFSGDPDDLLRRYDAMVAEIPAANMRLHLCM
Ga0066708_104094171	3300005576	Soil	MHASIWRFAGDPDELLRRYDGMLEEIPRARMRLHICLRATDGIVFIDTCPTKEDFESFAYGDDFRA
Ga0066708_107358482	3300005576	Soil	MHASIWRFAGDPDDLLRRYDAMRAEIPAANMRLQLCLRAPDGILLVDTCPTREIFEAFAGGDAF
Ga0068854_1013292863	3300005578	Corn Rhizosphere	MHASIWRFRGDPDELLRGYDAMLAEIPAANMKLHLCLRAPDGIVLVD
Ga0068856_1009583501	3300005614	Corn Rhizosphere	MHASITHFSGHPDDLEASYDALLAEVPSANIRLHLCLRAPDGL
Ga0068861_1009568311	3300005719	Switchgrass Rhizosphere	MHASIWRFRGDPDDLLRRYDAVIAEIPPANMRLHLCLRA
Ga0068862_1007217051	3300005844	Switchgrass Rhizosphere	MHASIWRFRGDPDDLLRRYDAVIAEIPPANMGLHLCLRAHDGIIVV
Ga0068862_1019397721	3300005844	Switchgrass Rhizosphere	VHASIWKFAGDPDDLLARYDAMVAEIPPGNLALHLCLRASDGIV
Ga0066696_109553621	3300006032	Soil	MHASIWRFSGDPDELLRRYDAMLAEVPAENMKLHLCLRAPDGIVVVDTCPS
Ga0066656_100979051	3300006034	Soil	MHASIWKFHGDPDELLRRYDAMLEEIPRARMRLHVCLGAPDGIVLVDTCPTKDIFESFARGDDF
Ga0070716_1017430421	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MHASIWKFRGDPDDLLRRYDAVVAEIPAANMRLHLCLRADDGIIV
Ga0074048_123170151	3300006581	Soil	VHASIWRFRGDPDELMESYEALLAEVPAESMRLHLCLRAEDGIVLVDTCPS
Ga0079222_116447281	3300006755	Agricultural Soil	MHASITHFSGHPDDLEASYDALLAEVPSANMRLHLCLRAPDGLVVVDTCPSQEAFNVFH
Ga0066653_106718942	3300006791	Soil	MHASIWKFAGDPDELLRRYDAMLDEIPRATMRLHVCLGAPDGIVLVDTC
Ga0066658_100794823	3300006794	Soil	MHASVWRFRGDPDDLLRRYDAMVAEIPAASMRLHLCLRASDGMVLVDTCPSRAVF
Ga0075428_1011452262	3300006844	Populus Rhizosphere	MHASIARFTGDPAGLLARYDAMLADEPLEDVRLHLCLRTDDGIVVVDTCPT
Ga0105251_104918571	3300009011	Switchgrass Rhizosphere	MHASIWRFRGDPDALLRRYDAITVEIPAAAMQAHLC
Ga0066710_1031847691	3300009012	Grasslands Soil	MHASIWKFAGDPDELLRRYDAILDEIPRAKMRLHVCLGAPDGIVLVDTCPTKDVFESFARGDDFRALRERHG
Ga0099828_111580432	3300009089	Vadose Zone Soil	MHASIWKFAGDPDELLRRYDAMLDEIPRAKMRLHVCLGAPDGIVVSRTSR*
Ga0105240_114612001	3300009093	Corn Rhizosphere	MHASIWKFAGDPDELLRRYDAMLEEIPRARMRLHVCLGAPDGIVLVDTCPTKEVFESFAHGDDFRALRERH
Ga0066709_1033510861	3300009137	Grasslands Soil	MHASIWKFAGDPDELLRRYDAMLDEIPRARMRLHVCLGAPDGIVLVDTC
Ga0066709_1034483341	3300009137	Grasslands Soil	MHASIWKFDGDPDELLRRYDAMLEEIPRARMRLHICLHAADGI
Ga0066709_1042757012	3300009137	Grasslands Soil	MHASIWRFAGDPDELLAGYDALVAEVPAENMRLQLCLRAADGIVL
Ga0105242_104521622	3300009176	Miscanthus Rhizosphere	VHASIWRFRGDPDELLERYDAMVAELPIPSLHLCLRAPDGIVLVDTCPSRDAFERFAASEEFAALRVRHG
Ga0126312_109232391	3300010041	Serpentine Soil	VHASIWKFAGDPDELLPRYDAMVTEIPSANMRLHLCLRADGGIVLVDTCPSKEVFEALSAGEEVRAMRERH
Ga0136218_10222804	3300010229	Soil	MHASIWRFRGDPDELLGSYDAMLAEIPAANMKLHLCLRAPDGIVLVDTCPTQEAFDAFS
Ga0134082_100896953	3300010303	Grasslands Soil	MHASIWNFAGNPGELLRRYDAMLEEIPRARMRLHICLRATDGIVFIDTCPTKEDFESSAYGDDFRALRERHGLPTP
Ga0134088_102397411	3300010304	Grasslands Soil	MHASIWKFAGDPDELLRRYDAMLDEITRAKMRLHICLRAPDGIVLVDTCPTRDVFESF
Ga0134065_100948812	3300010326	Grasslands Soil	MHASIWKFGGDPDELLRRYDAMLEQIPRARMRLHVCLRAPGGIVLVDTCPTK
Ga0134080_101916052	3300010333	Grasslands Soil	MHASIWKFAGDPDELLRRYDAMLDEIPRAKMRLHVCLGAPD
Ga0134071_102914761	3300010336	Grasslands Soil	MHASIWKFHGDPDELLRRYDAMLEEIPRARMRLHVCLRAPGGIVLVDTCPTKDVFESFARGDDFRAL
Ga0134066_101106301	3300010364	Grasslands Soil	MHASIWKFAGDPDELLRRYDAMLDEITRAKMRLHICLRAPDGIVLVDTCPTKDVFESFARGDDFRA
Ga0134122_115324861	3300010400	Terrestrial Soil	MHASIWRFRGDPDALLRRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTR
Ga0134121_117563061	3300010401	Terrestrial Soil	MHASIWKFRGDPDDLLRRYDAVVAEIPAANMRLHLC
Ga0137392_102670281	3300011269	Vadose Zone Soil	MHASIWKFAGDPDELLRRYDAMLEEIPRARMRLHVCLGAPDGIVVSRTSR*
Ga0137364_106426182	3300012198	Vadose Zone Soil	MHASIWKFAGDPDELLRRYDAMLDEIPRAKMRLHVCLGAPDGIVLVDTCPTKDVFESFARGDDF
Ga0137364_107384162	3300012198	Vadose Zone Soil	MHASLWRFKGDPDELLERYEAMLAETPGEKMRLHLCMRAPDGIIWVDTCPSKEIF
Ga0137364_108603602	3300012198	Vadose Zone Soil	VHASLWRFRGDPDELLRRYEAVLTDIPAESMRLHL
Ga0137365_104259371	3300012201	Vadose Zone Soil	MHASIWRFAGDPDELLRRWDAVVAEIPRANMRLQLCLRAVDGIVL
Ga0137362_105437871	3300012205	Vadose Zone Soil	MHASIWKFHGDPDELLRRYDAMLEEIPRARMRLHICVRAPDG
Ga0137381_107778491	3300012207	Vadose Zone Soil	MHASIWRFVGDPDELVRRYDAMVAEIPRANMRLHLC
Ga0137385_104673302	3300012359	Vadose Zone Soil	MHASIWKFGGDPDELLRRYDAMLDEIPRAKMRLHVCLGAPDGIVLVDTCPTK
Ga0137360_109651561	3300012361	Vadose Zone Soil	MHASIWKFAVNPDELLRRYDAMLDEIPRARMRLHVCLGAPDGIVLVDTCPTKDV
Ga0137361_115940082	3300012362	Vadose Zone Soil	MHASIWKFAGDPDELLRRYDAMLDEIPRARMRLHVCLRAPDGIVLVDTCPTKDV
Ga0137358_107486722	3300012582	Vadose Zone Soil	MHASIWKFHGDPDELLRRYAAMLEEAPRARMRLHVGVAAPDGLVLVDTWPTKDVFEAFARVDDF
Ga0137398_106637162	3300012683	Vadose Zone Soil	MHAWIWKFAGDPDELLRRYDAMLEEIPRARMRLHVCLRAPDGIVLVDTCPTKDLFESFARGDDFRA
Ga0137413_117220531	3300012924	Vadose Zone Soil	MHASIWKLEGDPADLLDRYDSMLAEIPTASMHLHLCLRAEDGIVIIDTCPSREAFHQFTGSETF
Ga0164301_107255882	3300012960	Soil	MVRGMHASISTFRGDPDDLLARYDAMAADVPEANLSLHMCLRAEDGIVVVDTCPSRAVA*
Ga0164302_103109601	3300012961	Soil	MVRGMHASISTFRGDPDDLLARYDAMAADLPDANLSLHMCTRAEAGIVVVANCPRRAPA*
Ga0134077_104421122	3300012972	Grasslands Soil	VHGSIWRFAGDPDELLRRYDAMVAEIPPANLRLHLCLR
Ga0164309_101895703	3300012984	Soil	VHASIWRFRGDPDDLLRRYEAMVAEIPAANMELHLCLRA
Ga0164309_106296772	3300012984	Soil	MVRGMHASISTFRGDPDDLLARYDAMAADIPEANLSLHMCLRAEDGIVVVDTCPSRAVA*
Ga0164309_106622071	3300012984	Soil	MHASITHFPGDPDDLEARYDALLAEVSSANMRLHLCLRAPDGLVVVDTCPSEEAFQAFHKDE
Ga0164307_110637402	3300012987	Soil	MHASIWRFRGDPDDLLRRYDAVVAEIPAANMRLHLCLRADDGIIVVDTCPD
Ga0164305_106951593	3300012989	Soil	MHASIWRFRGDPDELLGSYDAMLAEIPAANMKLHLCLRAP
Ga0157371_110277243	3300013102	Corn Rhizosphere	MHASIWKFSGDPDELLRGYDAMVAEIPSANMRPHLCLRARDGIVLVDTCPTKEVF
Ga0157372_125265261	3300013307	Corn Rhizosphere	VHASIWRFRGDPDELLRGYDAMVAEIPSANMKLHLCLRASDGIVLVDT
Ga0157375_114585592	3300013308	Miscanthus Rhizosphere	MHASIWKFSGDADDLVRRYEAMLADVPAGNIGLQLCLRAP
Ga0120154_11242972	3300013501	Permafrost	MHASIWKFSGDPDDLLRRYDAMLAEIPTANMRLHLCLQAPDGIVMVDTCPSR
Ga0134079_105228442	3300014166	Grasslands Soil	MHASIWKFHGDPDELLRRYDAMLDEIPRARMRLHVCLGAP
Ga0075320_10751892	3300014255	Natural And Restored Wetlands	LHASIWRFAGDPDELLASYESMVAEIPAENMRLHLCLRAEDGIVLVD
Ga0157380_110879141	3300014326	Switchgrass Rhizosphere	VHASIWKFAGDPDDLLARYDAMVAEIPPGNLALHLCLRASDGIVLV
Ga0182008_104122211	3300014497	Rhizosphere	MHASIWKFSGDPDDLVARYEAMLAEIPAANMELQLCLRAPDGILLVDTCPS
Ga0137412_102065913	3300015242	Vadose Zone Soil	MHASIWKFAGDPDELLRRYDAMLEEIPRARMRLHVCLGAPDGIVLVDTCPTKDVVRLEEIVNPIVL*
Ga0137403_112365642	3300015264	Vadose Zone Soil	MHASLWRFSGAPDDLLRRYDAMLAELGAENMRLHLCLRAPDGIVLVDTCPSKESFDQFVKGTFSERRKRH
Ga0134073_103715332	3300015356	Grasslands Soil	MHASIWRFAGDPDDLLRRYDAMRAEIPAANMRLQLCLRAPDGILLV
Ga0134069_10935921	3300017654	Grasslands Soil	MHASIWKFAGDPDELLRRYDAMLDEIPRARMRLHVCLGAPDGIVLVDTCPTKD
Ga0187788_100821974	3300018032	Tropical Peatland	MHASIWKFTGDPGTLLAGYDAMLADIPPENMMLHLCLEAPDGIVLVDTCPS
Ga0187765_100896625	3300018060	Tropical Peatland	MHASIWRFTGDPDELARRYDAMLAGVPTENMRLHL
Ga0066667_105126122	3300018433	Grasslands Soil	MHASLWRFSGDPDDLLRRYDAMVAEIPTASMRVHLCMRAREGIVVVDTCPSE
Ga0066667_106522472	3300018433	Grasslands Soil	MHASIWRFSGDPDELLRRYDAMLAEVPAENMKLHLCLQAPDGIVVVDTCPSRDAF
Ga0066662_115359683	3300018468	Grasslands Soil	MHGSIWKFAGDPNDLLRRYEAMLADIPTANMRLHLCLRAPDGIIMIDTCPSQDVYEAFASGPFL
Ga0066662_119435262	3300018468	Grasslands Soil	MHASIWKFAGDPDELLRRYDAMLDEIPHAKMRLHVCLGAPDGIVLVDTCPTKEVFESFARGDDFRALRERHGLPDPSN
Ga0066662_120528291	3300018468	Grasslands Soil	MHASIWKFSGDPDELAPRYDAMAADIPSANMRLHLCLRAPNGILMVDTCPSREVFEAFSS
Ga0066662_123198202	3300018468	Grasslands Soil	MHASMCKFAGNPVELLRHYDAMIEEIPRARMRLHLCLRADGIVLVDICPTKDVFESFARG
Ga0066662_124296172	3300018468	Grasslands Soil	MHASIWRFRGDPDELLDRYDAMVAEIPLENMRLHLCLRDEDGIVMVDICPTREAFVSFAGGEA
Ga0066662_129200831	3300018468	Grasslands Soil	IWTFAGDPDELLRRYDAMLDEIPRAKMRLHVCLGAPDGIVLVDT
Ga0206354_100949811	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MHASIWRFRGDPDDLLRRYDAVIAEIPPANMRLHLCLRAHDGIIV
Ga0247660_10636862	3300024317	Soil	VHASIWRFRGDPDELMRSYEALVAKIPTENMRLHVCLRAGNGIVPVDTCPSKEVFDG
Ga0209584_101377103	3300025878	Arctic Peat Soil	VHAALWKFRGDPDELLARYDALLAEIGAGGLQLHACLRAADGIVM
Ga0207688_100297314	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MHASIWRFRGDPDDLLRRYDAVIAEIPPANMRLHL
Ga0207695_104454203	3300025913	Corn Rhizosphere	MHASIWKFAGDPDELLRRYDAMLEEIPRARMRLHVCLGA
Ga0207686_105311361	3300025934	Miscanthus Rhizosphere	MHASISTFRGDPDDLVARYDAALAELGTASIDLQLCLRTDDGIVVVDTCP
Ga0207640_104672654	3300025981	Corn Rhizosphere	MHASIWRFRGDPDELLRGYDAMLAEIPAANMKLHLCPRSRRD
Ga0207703_101852894	3300026035	Switchgrass Rhizosphere	VHTSIWKFAGDPDDLLARYDAMVAEIPPGNLALHLCLRASDGIV
Ga0207639_106101141	3300026041	Corn Rhizosphere	VNLHASIWTFRGDPDQLLRSYDAMVAEVPRANFKLHL
Ga0207702_113275711	3300026078	Corn Rhizosphere	MHASIWRFRGDPDELLRGYDAMLAEIPAANMKLHLCLRAPD
Ga0207674_106968822	3300026116	Corn Rhizosphere	MHASIWKFAGDPDELLRRYDAMLEEIPRAGMRLHVCLRAPDGIVLVDTCPTKEVFESFAHGDD
Ga0207698_103690452	3300026142	Corn Rhizosphere	MHASIWRFRGDPDALLLRYDAITVEIPAAAMQAHLCLRAP
Ga0209027_12187382	3300026300	Grasslands Soil	MHASIWKFNGDPDTLLAGYEAMLAEIPAASLALQLCL
Ga0209159_12863752	3300026343	Soil	MHASIWTFAGDPDELLRRYDAMLEEIPRARMRLHVCLGAPDGIVLVDTCPTKDVFESFARGDDFRALRERH
Ga0209806_12215661	3300026529	Soil	MHASIWKFAGDPDELLRRYDAMLDEIPRARMRLHVCLRAPDG
Ga0209056_104723572	3300026538	Soil	MHASIWKFAGDPDELLRRYDAMLDEIPRAKMRLHVCLGAPDGIVLVDTCPTKDVFESFA
Ga0209376_12917991	3300026540	Soil	MHASIWKFAGDPDELLRRYDAMLDEITRAKMRLHICLRAPDG
Ga0209474_102982852	3300026550	Soil	MHASIWKFTGDPDELLQRYDTMVEEIPRARMRLHICLRAADGIVLVDTCPTKEIFESFAQGGDFRALRERHGF
Ga0209577_104703621	3300026552	Soil	MHASIWKFAGDPDELLRRYDAMLDEIPRARMRLHVCLRAPDGIVLVDTCPTKDVFEAFAHGDAFRALRER
Ga0268266_102025641	3300028379	Switchgrass Rhizosphere	VHASIWKFSGDPDDLLARYDAMMAEAGAANLRLHVCL
Ga0265319_10118961	3300028563	Rhizosphere	VHAALWKFGGDPDDLLARYDAMLAEIGAGGMQLHACLRAPDGI
Ga0307305_105240821	3300028807	Soil	MHASIWRFAGDPDELVAAYDALVAEVPTENMRLQLCLRAADGIVLVDACP
Ga0247825_111568402	3300028812	Soil	VHASIWKFAGDGEDLLARYDAMVAEIPPGNLALHLCLRAGDGIVLVDT
Ga0318496_108165011	3300031713	Soil	VHASISHFPGDPDELVACYDALLADVTPAGLQVHLCLRAPDGIVVVDTCPSR
Ga0302321_1030683662	3300031726	Fen	VHASIWKFSGDPDELLARYDAMMGEIGADNLRLHICLRADDGIVMLDAC
Ga0308175_1028178851	3300031938	Soil	MHASIWKFSGDPDALERGYDAMVAQVPAEQMRLHLCLRASDGILIVDTCPTR
Ga0308175_1032048701	3300031938	Soil	MHASIWRFEGDPDELLRRYDAVVAEIPAANMRLHLCLRADDGIIVVDTF
Ga0308176_121377862	3300031996	Soil	MHASIWKFAGDPDELLRRYDAMLEEIPRARMRLHVCLRAPDGIVLVDTCPTKEVFESFAH
Ga0308176_124452802	3300031996	Soil	VHASLWRFAGDPDELLARYDAMISEIGASGMRLHVCLRAADGILMLDTCPDR
Ga0308173_117240491	3300032074	Soil	MHASICTFRGDPDELLARYDAMVAEIPPASMRLHLCLRGDDGIVVVDTC
Ga0335070_118954242	3300032829	Soil	VHASIWKFTGGPDDLLRRYEAMVGELPAANMRLHLCLRAPDGIVLV
Ga0326730_10682143	3300033500	Peat Soil	MHASIWKFAGDPDELLARYDAMVAEIPQANLVLHMCLRADDGIVLIDTCPSAEVF
Ga0247830_105279602	3300033551	Soil	MHASIWRFRGDPDALLRRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTRE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052119

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences