NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F052115

Metagenome / Metatranscriptome Family F052115

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F052115
Family Type Metagenome / Metatranscriptome
Number of Sequences 143
Average Sequence Length 44 residues
Representative Sequence MKTPIHLKRHGDSYFHLHPLHAVFSLIASFVLAVLIVLMLVRSAR
Number of Associated Samples 100
Number of Associated Scaffolds 143

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 66.43 %
% of genes near scaffold ends (potentially truncated) 33.57 %
% of genes from short scaffolds (< 2000 bps) 69.93 %
Associated GOLD sequencing projects 94
AlphaFold2 3D model prediction Yes
3D model pTM-score0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (78.322 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(24.476 % of family members)
Environment Ontology (ENVO) Unclassified
(37.762 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(30.769 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 49.32%    β-sheet: 0.00%    Coil/Unstructured: 50.68%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 143 Family Scaffolds
PF06723MreB_Mbl 14.69
PF00656Peptidase_C14 8.39
PF07927HicA_toxin 6.29
PF00596Aldolase_II 2.80
PF02082Rrf2 2.80
PF07238PilZ 2.10
PF02353CMAS 2.10
PF00970FAD_binding_6 1.40
PF09285Elong-fact-P_C 1.40
PF11154DUF2934 1.40
PF13646HEAT_2 1.40
PF00582Usp 1.40
PF00891Methyltransf_2 1.40
PF07969Amidohydro_3 0.70
PF13506Glyco_transf_21 0.70
PF02915Rubrerythrin 0.70
PF12849PBP_like_2 0.70
PF09723Zn-ribbon_8 0.70
PF13649Methyltransf_25 0.70
PF12838Fer4_7 0.70
PF01139RtcB 0.70
PF04073tRNA_edit 0.70
PF10263SprT-like 0.70
PF04545Sigma70_r4 0.70
PF12867DinB_2 0.70
PF07366SnoaL 0.70
PF13365Trypsin_2 0.70
PF03466LysR_substrate 0.70
PF00589Phage_integrase 0.70
PF03992ABM 0.70
PF11373DUF3175 0.70
PF08207EFP_N 0.70
PF00027cNMP_binding 0.70
PF00118Cpn60_TCP1 0.70
PF13545HTH_Crp_2 0.70
PF13439Glyco_transf_4 0.70
PF04430DUF498 0.70
PF13276HTH_21 0.70
PF06202GDE_C 0.70
PF00759Glyco_hydro_9 0.70
PF01979Amidohydro_1 0.70
PF05368NmrA 0.70
PF10861DUF2784 0.70
PF00072Response_reg 0.70

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 143 Family Scaffolds
COG1077Cell shape-determining ATPase MreB, actin-like superfamilyCell cycle control, cell division, chromosome partitioning [D] 14.69
COG4249Uncharacterized conserved protein, contains caspase domainGeneral function prediction only [R] 8.39
COG1724Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase familyGeneral function prediction only [R] 6.29
COG2186DNA-binding transcriptional regulator, FadR familyTranscription [K] 2.80
COG2524Predicted transcriptional regulator, contains C-terminal CBS domainsTranscription [K] 2.80
COG2378Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domainsTranscription [K] 2.80
COG2188DNA-binding transcriptional regulator, GntR familyTranscription [K] 2.80
COG1959DNA-binding transcriptional regulator, IscR familyTranscription [K] 2.80
COG1725DNA-binding transcriptional regulator YhcF, GntR familyTranscription [K] 2.80
COG1414DNA-binding transcriptional regulator, IclR familyTranscription [K] 2.80
COG0640DNA-binding transcriptional regulator, ArsR familyTranscription [K] 2.80
COG2226Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenGCoenzyme transport and metabolism [H] 2.10
COG22272-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylaseCoenzyme transport and metabolism [H] 2.10
COG2230Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferasesLipid transport and metabolism [I] 2.10
COG1690RNA-splicing ligase RtcB, repairs tRNA damageTranslation, ribosomal structure and biogenesis [J] 0.70
COG0231Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)Translation, ribosomal structure and biogenesis [J] 0.70
COG1504Uncharacterized conserved protein, DUF498 domainFunction unknown [S] 0.70
COG3408Glycogen debranching enzyme (alpha-1,6-glucosidase)Carbohydrate transport and metabolism [G] 0.70
COG3737Uncharacterized protein, contains Mth938-like domainFunction unknown [S] 0.70
COG0459Chaperonin GroEL (HSP60 family)Posttranslational modification, protein turnover, chaperones [O] 0.70

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms78.32 %
UnclassifiedrootN/A21.68 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001356|JGI12269J14319_10175234All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium877Open in IMG/M
3300002910|JGI25615J43890_1049559Not Available690Open in IMG/M
3300002910|JGI25615J43890_1074809All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Pseudarthrobacter → Pseudarthrobacter sulfonivorans587Open in IMG/M
3300002914|JGI25617J43924_10053325All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1473Open in IMG/M
3300002917|JGI25616J43925_10073426All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1442Open in IMG/M
3300004478|Ga0068972_1466954All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Pseudarthrobacter → Pseudarthrobacter sulfonivorans644Open in IMG/M
3300005445|Ga0070708_100187914All Organisms → cellular organisms → Bacteria1932Open in IMG/M
3300005467|Ga0070706_100171882Not Available2023Open in IMG/M
3300005467|Ga0070706_101989377Not Available526Open in IMG/M
3300005468|Ga0070707_100222822All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1836Open in IMG/M
3300005468|Ga0070707_100853406All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium875Open in IMG/M
3300005938|Ga0066795_10016246All Organisms → cellular organisms → Bacteria2081Open in IMG/M
3300006028|Ga0070717_10220976All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1665Open in IMG/M
3300006050|Ga0075028_100081861All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1616Open in IMG/M
3300006052|Ga0075029_100326647All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium984Open in IMG/M
3300006055|Ga0097691_1038805All Organisms → cellular organisms → Bacteria1770Open in IMG/M
3300006059|Ga0075017_100224344All Organisms → cellular organisms → Bacteria1366Open in IMG/M
3300006174|Ga0075014_100343897All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium798Open in IMG/M
3300006175|Ga0070712_101158417All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium672Open in IMG/M
3300006893|Ga0073928_10133089All Organisms → cellular organisms → Bacteria2030Open in IMG/M
3300007258|Ga0099793_10610007All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium547Open in IMG/M
3300007258|Ga0099793_10683587Not Available517Open in IMG/M
3300009029|Ga0066793_10034528All Organisms → cellular organisms → Bacteria2823Open in IMG/M
3300009029|Ga0066793_10128237All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1478Open in IMG/M
3300009038|Ga0099829_11746488Not Available510Open in IMG/M
3300009088|Ga0099830_10931725Not Available719Open in IMG/M
3300009090|Ga0099827_11614129Not Available565Open in IMG/M
3300009698|Ga0116216_10103371All Organisms → cellular organisms → Bacteria1753Open in IMG/M
3300010339|Ga0074046_10000846All Organisms → cellular organisms → Bacteria28209Open in IMG/M
3300010339|Ga0074046_10003471All Organisms → cellular organisms → Bacteria13172Open in IMG/M
3300010339|Ga0074046_10014016All Organisms → cellular organisms → Bacteria → Acidobacteria5811Open in IMG/M
3300010339|Ga0074046_10020051All Organisms → cellular organisms → Bacteria4706Open in IMG/M
3300010341|Ga0074045_10026223All Organisms → cellular organisms → Bacteria4470Open in IMG/M
3300010379|Ga0136449_100438250All Organisms → cellular organisms → Bacteria2298Open in IMG/M
3300010379|Ga0136449_101371150Not Available1095Open in IMG/M
3300010379|Ga0136449_101565306Not Available1004Open in IMG/M
3300011269|Ga0137392_10584635All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium927Open in IMG/M
3300011269|Ga0137392_11625875Not Available504Open in IMG/M
3300011270|Ga0137391_10002965All Organisms → cellular organisms → Bacteria → Acidobacteria12787Open in IMG/M
3300011270|Ga0137391_11108564All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium639Open in IMG/M
3300011271|Ga0137393_10344083All Organisms → cellular organisms → Bacteria1273Open in IMG/M
3300011271|Ga0137393_10528996All Organisms → cellular organisms → Bacteria1011Open in IMG/M
3300012096|Ga0137389_10030823All Organisms → cellular organisms → Bacteria → Acidobacteria3889Open in IMG/M
3300012096|Ga0137389_10492240Not Available1051Open in IMG/M
3300012189|Ga0137388_10008840All Organisms → cellular organisms → Bacteria6995Open in IMG/M
3300012189|Ga0137388_10184060All Organisms → cellular organisms → Bacteria → Acidobacteria1874Open in IMG/M
3300012199|Ga0137383_10165866All Organisms → cellular organisms → Bacteria → Acidobacteria1618Open in IMG/M
3300012209|Ga0137379_10230589All Organisms → cellular organisms → Bacteria1766Open in IMG/M
3300012349|Ga0137387_10829243All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300012361|Ga0137360_10728273All Organisms → cellular organisms → Bacteria852Open in IMG/M
3300012361|Ga0137360_11422745Not Available597Open in IMG/M
3300012362|Ga0137361_10469997All Organisms → cellular organisms → Bacteria1155Open in IMG/M
3300012363|Ga0137390_10067545All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3494Open in IMG/M
3300012363|Ga0137390_10603101Not Available1066Open in IMG/M
3300012363|Ga0137390_10822807Not Available886Open in IMG/M
3300012532|Ga0137373_10153247All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1942Open in IMG/M
3300012582|Ga0137358_10532253All Organisms → cellular organisms → Bacteria791Open in IMG/M
3300012683|Ga0137398_10189586All Organisms → cellular organisms → Bacteria → Acidobacteria1352Open in IMG/M
3300012917|Ga0137395_10486865Not Available888Open in IMG/M
3300012923|Ga0137359_10005544All Organisms → cellular organisms → Bacteria → Acidobacteria10408Open in IMG/M
3300012923|Ga0137359_10244920All Organisms → cellular organisms → Bacteria1599Open in IMG/M
3300014165|Ga0181523_10825644All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium505Open in IMG/M
3300016341|Ga0182035_10471093All Organisms → cellular organisms → Bacteria1068Open in IMG/M
3300016750|Ga0181505_10822109All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium680Open in IMG/M
3300017822|Ga0187802_10032684All Organisms → cellular organisms → Bacteria1853Open in IMG/M
3300017823|Ga0187818_10009239All Organisms → cellular organisms → Bacteria → Acidobacteria4208Open in IMG/M
3300017823|Ga0187818_10017771All Organisms → cellular organisms → Bacteria3041Open in IMG/M
3300017823|Ga0187818_10017948All Organisms → cellular organisms → Bacteria3025Open in IMG/M
3300017823|Ga0187818_10047360All Organisms → cellular organisms → Bacteria → Acidobacteria1847Open in IMG/M
3300017823|Ga0187818_10157580All Organisms → cellular organisms → Bacteria → Acidobacteria988Open in IMG/M
3300017925|Ga0187856_1069843All Organisms → cellular organisms → Bacteria1468Open in IMG/M
3300017928|Ga0187806_1381540Not Available507Open in IMG/M
3300017933|Ga0187801_10321774All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium632Open in IMG/M
3300017934|Ga0187803_10002269All Organisms → cellular organisms → Bacteria7568Open in IMG/M
3300017934|Ga0187803_10070379All Organisms → cellular organisms → Bacteria1377Open in IMG/M
3300017943|Ga0187819_10103692All Organisms → cellular organisms → Bacteria1699Open in IMG/M
3300017943|Ga0187819_10103968All Organisms → cellular organisms → Bacteria1696Open in IMG/M
3300017943|Ga0187819_10132441All Organisms → cellular organisms → Bacteria1486Open in IMG/M
3300017946|Ga0187879_10778278All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300017955|Ga0187817_10114731All Organisms → cellular organisms → Bacteria1702Open in IMG/M
3300017955|Ga0187817_10181754All Organisms → cellular organisms → Bacteria1339Open in IMG/M
3300017955|Ga0187817_10280346All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1063Open in IMG/M
3300017955|Ga0187817_10477575All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300017955|Ga0187817_10925105Not Available558Open in IMG/M
3300017966|Ga0187776_10006022All Organisms → cellular organisms → Bacteria6379Open in IMG/M
3300017995|Ga0187816_10011368All Organisms → cellular organisms → Bacteria3304Open in IMG/M
3300018001|Ga0187815_10015410All Organisms → cellular organisms → Bacteria3320Open in IMG/M
3300018001|Ga0187815_10159498All Organisms → cellular organisms → Bacteria955Open in IMG/M
3300018007|Ga0187805_10006672All Organisms → cellular organisms → Bacteria4710Open in IMG/M
3300018012|Ga0187810_10031545All Organisms → cellular organisms → Bacteria1946Open in IMG/M
3300018012|Ga0187810_10080470Not Available1261Open in IMG/M
3300018013|Ga0187873_1050169All Organisms → cellular organisms → Bacteria1815Open in IMG/M
3300018085|Ga0187772_10060132All Organisms → cellular organisms → Bacteria2360Open in IMG/M
3300018088|Ga0187771_10770490Not Available816Open in IMG/M
3300018468|Ga0066662_10254477Not Available1438Open in IMG/M
3300019264|Ga0187796_1560633All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300019888|Ga0193751_1032402Not Available2430Open in IMG/M
3300020006|Ga0193735_1069985All Organisms → cellular organisms → Bacteria → Acidobacteria1015Open in IMG/M
3300020062|Ga0193724_1111610Not Available546Open in IMG/M
3300021046|Ga0215015_10621478All Organisms → cellular organisms → Bacteria → Acidobacteria3538Open in IMG/M
3300022557|Ga0212123_10019616All Organisms → cellular organisms → Bacteria → Acidobacteria7851Open in IMG/M
3300022557|Ga0212123_10030654All Organisms → cellular organisms → Bacteria → Acidobacteria5534Open in IMG/M
3300025432|Ga0208821_1041813All Organisms → cellular organisms → Bacteria868Open in IMG/M
3300025439|Ga0208323_1016884All Organisms → cellular organisms → Bacteria1642Open in IMG/M
3300025581|Ga0208355_1092149Not Available653Open in IMG/M
3300025910|Ga0207684_10274288All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1455Open in IMG/M
3300025910|Ga0207684_11355939Not Available584Open in IMG/M
3300026223|Ga0209840_1022734All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1438Open in IMG/M
3300026304|Ga0209240_1086376All Organisms → cellular organisms → Bacteria1147Open in IMG/M
3300026361|Ga0257176_1031572Not Available800Open in IMG/M
3300026494|Ga0257159_1089409All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium536Open in IMG/M
3300027394|Ga0209904_1001029All Organisms → cellular organisms → Bacteria → Acidobacteria2398Open in IMG/M
3300027667|Ga0209009_1172556Not Available549Open in IMG/M
3300027738|Ga0208989_10040438All Organisms → cellular organisms → Bacteria1617Open in IMG/M
3300027738|Ga0208989_10277513Not Available540Open in IMG/M
3300027846|Ga0209180_10269640Not Available978Open in IMG/M
3300027854|Ga0209517_10051468All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3107Open in IMG/M
3300027862|Ga0209701_10214891All Organisms → cellular organisms → Bacteria1140Open in IMG/M
3300027862|Ga0209701_10263975All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1002Open in IMG/M
3300027875|Ga0209283_10079721All Organisms → cellular organisms → Bacteria → Acidobacteria2120Open in IMG/M
3300027903|Ga0209488_10496902Not Available895Open in IMG/M
3300027905|Ga0209415_10022541All Organisms → cellular organisms → Bacteria9612Open in IMG/M
3300027911|Ga0209698_10024490All Organisms → cellular organisms → Bacteria5638Open in IMG/M
3300031945|Ga0310913_10701767All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium716Open in IMG/M
3300032160|Ga0311301_10012327All Organisms → cellular organisms → Bacteria26612Open in IMG/M
3300032160|Ga0311301_11200790All Organisms → cellular organisms → Bacteria972Open in IMG/M
3300032770|Ga0335085_10000938All Organisms → cellular organisms → Bacteria70250Open in IMG/M
3300032770|Ga0335085_10019128All Organisms → cellular organisms → Bacteria9821Open in IMG/M
3300032782|Ga0335082_10228168All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.1752Open in IMG/M
3300032783|Ga0335079_10004030All Organisms → cellular organisms → Bacteria16904Open in IMG/M
3300032783|Ga0335079_10117138All Organisms → cellular organisms → Bacteria3008Open in IMG/M
3300032805|Ga0335078_10602310All Organisms → cellular organisms → Bacteria1385Open in IMG/M
3300032805|Ga0335078_10817139All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1134Open in IMG/M
3300032829|Ga0335070_10027339All Organisms → cellular organisms → Bacteria6533Open in IMG/M
3300032829|Ga0335070_10200364All Organisms → cellular organisms → Bacteria1988Open in IMG/M
3300032829|Ga0335070_11549310All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium603Open in IMG/M
3300032892|Ga0335081_10043854All Organisms → cellular organisms → Bacteria7077Open in IMG/M
3300032893|Ga0335069_10089325All Organisms → cellular organisms → Bacteria3916Open in IMG/M
3300033004|Ga0335084_10758170All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium987Open in IMG/M
3300033158|Ga0335077_10093970All Organisms → cellular organisms → Bacteria3532Open in IMG/M
3300033158|Ga0335077_12160347Not Available513Open in IMG/M
3300033486|Ga0316624_10392835Not Available1157Open in IMG/M
3300033513|Ga0316628_100091006All Organisms → cellular organisms → Bacteria3379Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil24.48%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment16.78%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil11.89%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.29%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil6.99%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.20%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds3.50%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil3.50%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.80%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring2.10%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.10%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.10%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.10%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland1.40%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.40%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil1.40%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil1.40%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.70%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.70%
Thawing PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost0.70%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001356Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007EnvironmentalOpen in IMG/M
3300002910Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cmEnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300002917Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cmEnvironmentalOpen in IMG/M
3300004478Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005938Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006055Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009029Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300010339Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3EnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300014165Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaGEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016750Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017925Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40EnvironmentalOpen in IMG/M
3300017928Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017934Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300017995Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1EnvironmentalOpen in IMG/M
3300018001Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5EnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018012Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5EnvironmentalOpen in IMG/M
3300018013Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100EnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019264Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019888Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020062Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1EnvironmentalOpen in IMG/M
3300021046Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depthEnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300025432Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025439Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025581Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026223Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190 (SPAdes)EnvironmentalOpen in IMG/M
3300026304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)EnvironmentalOpen in IMG/M
3300026361Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-BEnvironmentalOpen in IMG/M
3300026494Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-AEnvironmentalOpen in IMG/M
3300027394Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 712P3DEnvironmentalOpen in IMG/M
3300027667Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027738Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027854Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033486Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_AEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12269J14319_1017523413300001356Peatlands SoilMKSLIHLKRHGDSYFHLHPSHAVFPLIASFVLAVLIVLTLVSSAR*
JGI25615J43890_104955923300002910Grasslands SoilMKTQIHLKRRGDSYFHLNPFHAMFSLIASFVLAVLIVLMLVPSAR*
JGI25615J43890_107480933300002910Grasslands SoilPIHLKRRGDSYFHLNPLHAVFSLIASFVLAVLMVLMLVPSAR*
JGI25617J43924_1005332533300002914Grasslands SoilGAFMRTPIHLKRHGDSYFHLHPSHAVFSLIASFVLALIVLTLVLSAR*
JGI25616J43925_1007342623300002917Grasslands SoilMKTQIHLKRRGDSYFHLNPLHAMFSLIASFVLAVLIVLMLVPSAR*
Ga0068972_146695413300004478Peatlands SoilGIRRPGRGTSMKTLIHLKRHGGVYFHLHPLHAMFSLIATFVLAVLVVLMLVSSAR*
Ga0070708_10018791433300005445Corn, Switchgrass And Miscanthus RhizosphereMKTSIHLKRRGDSYFHLNPLHALFSLIASFVLAVLIVLMLVPSAR*
Ga0070706_10017188213300005467Corn, Switchgrass And Miscanthus RhizosphereMRTPIHLKRHGDSYFHLHLLHAVFSLIASFVLAVLIVLTLVPSAR*
Ga0070706_10198937713300005467Corn, Switchgrass And Miscanthus RhizosphereMKTAIHLKRRGESYFHLNPLHAVFSLIASFVLAVLIVFMLVPSAR*
Ga0070707_10022282223300005468Corn, Switchgrass And Miscanthus RhizosphereVGDGAFMRTPIHLKRHGDSYFHLHPLHAVFSLIASFVLAVLIVLTLVLSAR*
Ga0070707_10085340623300005468Corn, Switchgrass And Miscanthus RhizosphereMKTPIHLKRRGDSYFHLNPLHAMFSLIASFVLAVLIVLMLVPSAR*
Ga0066795_1001624613300005938SoilMNTLIHLKRHGEVHFHLHPLLETFSLIASFLLAMLVVLMLVSSAR*
Ga0070717_1022097633300006028Corn, Switchgrass And Miscanthus RhizosphereMNTLIHLKRHGEVYFKLHPLLETFSLVASFLFAVLVVLMFVSSAR*
Ga0075028_10008186123300006050WatershedsMKTLIHLKRHGDDHFHTHPLHTMFALVASLVLAGLVVLALVSSTR*
Ga0075029_10032664723300006052WatershedsMKTLIHLKRHGDSYFHVHPQHAIFSLVAGFVLAVLVVLVLASSAR*
Ga0097691_103880523300006055Arctic Peat SoilMRTPMHLKRHGDSYFHLHPLHAVFSLIASFVLAVLIVLTLVPSAR*
Ga0075017_10022434433300006059WatershedsMRTPIHLKRHGDSYFHLHPLHAVFSLIASFVLAVLIVLMLVRSAR*
Ga0075014_10034389713300006174WatershedsMKTLIHLKRHGDGYFHLGHPHAVFLLVAGFVLAALVVLVLVPAAR*
Ga0070712_10115841713300006175Corn, Switchgrass And Miscanthus RhizosphereHLKRHGEVYFKLHPLLETFSLVASFLFAVLVVLMFVSSAR*
Ga0073928_1013308923300006893Iron-Sulfur Acid SpringMRTPIHLKRHGDSYFHLHPLHAVFSLIASFVLAVLIVLTLVPSAR*
Ga0099793_1061000713300007258Vadose Zone SoilMNTLIHLKRHGEVYSKLHPLLDTFSLIASFLLAVLVVLMLVSSAR*
Ga0099793_1068358723300007258Vadose Zone SoilMRTPIHLKRHGDSYFHLHPLHAVFSLIASFVLAVLIVLTLVLSAR*
Ga0066793_1003452823300009029Prmafrost SoilMHLKRHGDSYFHLHPLHAVFSLIASFVLAVLIVLTLVPSAR*
Ga0066793_1012823713300009029Prmafrost SoilLTASAAIGEAPMNTLIHLKRHGEVHFHLHPLLETFSLIASFLLAMLVVLMLVSSAR*
Ga0099829_1174648813300009038Vadose Zone SoilGDSYFHLHPLHAVFSLIASFVLAVLIVSTLVPSAR*
Ga0099830_1093172523300009088Vadose Zone SoilMRTPIHLKRHGDSYFHLHPSHAVFSLIASFVLAVLIVLTLVLSAR*
Ga0099827_1161412913300009090Vadose Zone SoilMKTPIHLKRRGDSYFHLNPLHAVFSLIASFVLAVLIVLMLVPSAR*
Ga0116216_1010337113300009698Peatlands SoilMKTLIHLKRHGGVYFHLHPLHAMFSLIATFVLAVLVVLMLVSSAR*
Ga0074046_10000846173300010339Bog Forest SoilMNTLIHLKRHGEVHFHLHPLLETFSLIASFLLAVLVVSMLVSSAR*
Ga0074046_1000347173300010339Bog Forest SoilMKTSIHFKRHGNGYFHLHPLHAVFSFIASFVLAALIVLMLVHSAR*
Ga0074046_1001401643300010339Bog Forest SoilMRTPIHLKRHGDSYFHLHPLHAAFSLIASFVLAVVIVLMLVPSAR*
Ga0074046_1002005123300010339Bog Forest SoilMKTPIHLKRHGDSYFHLHPLHAVFSLIASFVLAVLIVLMLVRSAR*
Ga0074045_1002622343300010341Bog Forest SoilMNTLMHLKRHGEIHFHLHPLLETFSLIASFLLAVLVVLMLVSSAR*
Ga0136449_10043825033300010379Peatlands SoilMKTPIHLKRHGDSYFHLHPLHAVFSLIASFVLTVLIVLMLVRSAR*
Ga0136449_10137115023300010379Peatlands SoilMKTLIHFKRHGDGYFQLHPQHAIFSLLSGFVLAVLVVLVLASSAR*
Ga0136449_10156530613300010379Peatlands SoilMNTLIHLERHSEGYFRLHPLHAVFSLIASFVLAVLVVLMLVSSVR*
Ga0137392_1058463513300011269Vadose Zone SoilIHLKRHGDSYFHLHPLHAVFSLIASFVLAGLNVLTLVLSAR*
Ga0137392_1162587513300011269Vadose Zone SoilMRTPIHLKRHGDSYFDLHPLHAVFSLIASFVLAVLIVLTL
Ga0137391_10002965243300011270Vadose Zone SoilMKTAIPLKRRGESYFHLNPLHAVFSLIASFVLAVLIVLMLVPSAR*
Ga0137391_1110856413300011270Vadose Zone SoilKRHGDSYFHLHPLHAVFSLIASFVLAVLIVLTLVLSAR*
Ga0137393_1034408323300011271Vadose Zone SoilMKTPIHLKRRGDSDFHLNPLHAMFSLIASFVLAVLIVLMLVPSAR*
Ga0137393_1052899613300011271Vadose Zone SoilLKRHGDSYFHLHPLHAVFSLIASFVLAVLIVLTLVLSAR*
Ga0137389_1003082333300012096Vadose Zone SoilMRTPIHLKRHGDSCFHLHPLHAVFSLIASFVLAVIVLTLVLSAR*
Ga0137389_1049224013300012096Vadose Zone SoilKGSAAVGEGAFMRTPIHLKRHGDSYFHLHPLHAVFLLIASFVLAVLIVLTLVPSAR*
Ga0137388_1000884093300012189Vadose Zone SoilMKTAIHLKRRGDSYFHLNPLHAVFSLIASFVLAVLIVLMLVPSAR*
Ga0137388_1018406023300012189Vadose Zone SoilMKTPIHLKRRGDSYFHLNPLHAMFSLIASFVLAMLIALMLVPSAR*
Ga0137383_1016586623300012199Vadose Zone SoilLKGSAAPVGEEAFMKTPIHLKRHRDSYFHLHPLHAVFSLIASFLLAVLIVLALVPSAR*
Ga0137379_1023058923300012209Vadose Zone SoilMNTLIHLKRHGEVYFKLHPLLETFSLIASFLLAVLVVLMLVSSAR*
Ga0137387_1082924313300012349Vadose Zone SoilHGDSYFHLHPLHAVFSLIASFLLAVLIVLALVPSAR*
Ga0137360_1072827313300012361Vadose Zone SoilMRTPIHLKRHGDSYFHLHPLHAVFSLIASFVLAVLIVL
Ga0137360_1142274513300012361Vadose Zone SoilMKTAIPLKRRGESYFHLNPLHAVFSLIASFVLAVLIV
Ga0137361_1046999723300012362Vadose Zone SoilFMKTPIHLKRRGDSYFHLNPLHAVFSLIASFVLAVLIVLMLVPSAR*
Ga0137390_1006754513300012363Vadose Zone SoilRHGEVYSKLHPLLDTFSLIASFLLAVLVVLMLVSSAR*
Ga0137390_1060310113300012363Vadose Zone SoilGDSYFHLHPLHAVFSLIASFVLAVLIVLTLVLSAR*
Ga0137390_1082280713300012363Vadose Zone SoilMNTLIHLKRHGEVYSKLHPLLDTFSLIASFLLAVLVVLMLVSSA
Ga0137373_1015324733300012532Vadose Zone SoilLIHLKRHGEVYSELHPLLDTFSLLAIFLLAVLVVLMLVSSAR*
Ga0137358_1053225323300012582Vadose Zone SoilAFMRTPIHLKRHGDSYFHLHPLHAVFSLIASFVLAVLIVLTLVPSAR*
Ga0137398_1018958613300012683Vadose Zone SoilMNTLIHLKRHGEVYSKLHPLLDTFSLIASFLLAVLVV
Ga0137395_1048686523300012917Vadose Zone SoilMNTLIHLKRHGEVYSKLHPLLDTFSLIASFLLAVLVILMLVSSAK*
Ga0137359_10005544183300012923Vadose Zone SoilHGDSYFHLHPSHAVFSLIASFVLAVLIVLTLVLSAR*
Ga0137359_1024492013300012923Vadose Zone SoilMRSPIHLKRHGDSYFHLHPSHAVFSLIASFVLAVLIVLTLVL
Ga0181523_1082564413300014165BogKGSAAMARPSMNMLIHLKRHGEVYLHLHPLHAMFSVIASFGLAVLVVLMLVSSAR*
Ga0182035_1047109333300016341SoilMKTLIHLKGHGNSSFHLHPQHAIFSLIAGLMLAVLV
Ga0181505_1082210913300016750PeatlandMNMLIHLKRHGEVYLHLHPLHAMFSVIASFGLAVLVVLMLVSSAR
Ga0187802_1003268423300017822Freshwater SedimentMKTPIHLNRHGDNYFHLHPWHAVFSFIASFVLAVLIVLTLVPSAR
Ga0187818_1000923953300017823Freshwater SedimentMKAPIHHKRHGGSYFHLHPSHAVFSLIASFALAVLIVLMLVRSAR
Ga0187818_1001777133300017823Freshwater SedimentMKTLTHLKRHGDSYFHLHPQHAIFSLVASFVLAVLVVLILASSVR
Ga0187818_1001794853300017823Freshwater SedimentMRTPIHLKRHGDSYFHLHPLHGVFSLIASFVLAVLIVLMLVPSAR
Ga0187818_1004736023300017823Freshwater SedimentMRTLIHLRRHGDGYFHLHPWHGVFSLITSFVLAVLIVLTLVSSVR
Ga0187818_1015758023300017823Freshwater SedimentMKTPIHLKRHGDNYFHLHPSHAMFSLVASFVLAVLIVLVLVSSAR
Ga0187856_106984313300017925PeatlandRHGVVYFHLHPLHAMFSLTTGFVLAVLVVLMLASSAR
Ga0187806_138154013300017928Freshwater SedimentMKMLIHLKGHGNSYFHLHPQHAVFSLVASFVLAVLVVLMMVSSAR
Ga0187801_1032177413300017933Freshwater SedimentMKMLIHLKGHGNSYFHLHPQHAVFSLVASFVLAALVVFILVSSAR
Ga0187803_1000226993300017934Freshwater SedimentMKTLIHLKRNGEVYFHLRTLHVMSSLIASFVLSVLVVLMLASSAR
Ga0187803_1007037913300017934Freshwater SedimentMKTPIHLKRNSDSYFHLQPWHAVFSLIASFVLAVLIVLTLVSSAR
Ga0187819_1010369213300017943Freshwater SedimentHLNRHGDNYFHLHPWHAVFSFIASFVLAVLIVLTLVPSAR
Ga0187819_1010396823300017943Freshwater SedimentVSARAFMRTLIHLRRHGDGYFHLHPWHGVFSLITSFVLAVLIVLTLVSSVR
Ga0187819_1013244133300017943Freshwater SedimentMKTLIHLKRNGGVYFHLHPLHAMFSLIAAFVLAVLVVLMLVSSAR
Ga0187879_1077827813300017946PeatlandMKTRTHLKRHGVVYFHLHPLHAMFSLTTGFVLAVLVV
Ga0187817_1011473123300017955Freshwater SedimentMKTLIHLRRRGDSYFHPQHAIFSLVASFVLAALVVLILVSSAR
Ga0187817_1018175433300017955Freshwater SedimentMKTPIHLNRHGDNYFHLHPWHAVFSFIASFVLAVLIVLTLV
Ga0187817_1028034613300017955Freshwater SedimentHLKRHGDSYFHLHPQHAIFSLVASFVLAVLVVLILASSAR
Ga0187817_1047757523300017955Freshwater SedimentMKTLIHLRRHGDSYFHLHPLHAVFSLIASFVLAVLIVLTLVTSVR
Ga0187817_1092510513300017955Freshwater SedimentMGEEALMKTLTHLKRHGDNYFHLHPQHAIFSLVASFVLAVLVVLILVSSAR
Ga0187776_1000602273300017966Tropical PeatlandMRTPIHLKRYGDSYFHLHPQHAVFSLVASLVLAVLVVLILVSSAR
Ga0187816_1001136823300017995Freshwater SedimentMKTLIHLKRHGGVYFHLHPLHAMFSLIATFVLAVLVVLMLVSSAK
Ga0187815_1001541023300018001Freshwater SedimentMKTLIHLKRHGDSYFHLHPQHAVFSLVAGFVLAVLVVLVLVSSAR
Ga0187815_1015949823300018001Freshwater SedimentMKTPIHLKRNGDSYFHLQPWHAVFSLIASFVLAVLIVLTLVPS
Ga0187805_1000667233300018007Freshwater SedimentMGTLIHLKRHGDGYLYLHLHQLHAIFSIVAGFVLAVLVVLVLASSAR
Ga0187810_1003154533300018012Freshwater SedimentMRTPIHLNRHGDSYFHLHPLHGVFSLIASFVLAVLIVLMLVPSAR
Ga0187810_1008047033300018012Freshwater SedimentMKTLIHFRRHGGSYFHLHPLHGAFSLIASFVLAVLIVLTLVSSVR
Ga0187873_105016913300018013PeatlandMKTRTHLKRHGAVYFHLHPLHAMFSLTTGFVLAVLVVLMLASSAR
Ga0187772_1006013223300018085Tropical PeatlandMRTLIHLRRHGDGYFHLHPWHAVFSLLTSFVLAALIVLTLVSSVR
Ga0187771_1077049013300018088Tropical PeatlandMKTLIHRKRVGESYFHLHPLHAVFSLIASFILAVLIVLVLVPSAR
Ga0066662_1025447733300018468Grasslands SoilMRTPIHLKRHGDSYFYLHPLHAVFSLIASFVLAVLIVLTLVLSAR
Ga0187796_156063313300019264PeatlandRSLKRNPPVSARAFMRTLIHLRRHGDGYFHLHPWHGVFSLITSFVLAVLIVLTLVSSVR
Ga0193751_103240213300019888SoilTPIHLKRHGDSYFHLHPLHAVFSLIASFVLAVLIVLTLVLSAR
Ga0193735_106998513300020006SoilMKTPIHLKRRGDSYFHLNPLHAVFSLIASFVLAVLIVLMLVPSAR
Ga0193724_111161013300020062SoilMNTLIHLKRHGEVYSKLHPLLDTFSLIASFLLAVLVVLMLVSSAR
Ga0215015_1062147823300021046SoilMKTPIHLNRHGDSYFHLHPLHAVFSLIANFVLAVLIVLALVPSAR
Ga0212123_1001961633300022557Iron-Sulfur Acid SpringMRTPIHLKRHGDSYFHLHPLHAVFSLIASFVLAVLIVLTLVPSAR
Ga0212123_10030654123300022557Iron-Sulfur Acid SpringMRTPIHLKRHGDSYFHLHPLHAVFALIASFVLAVLIVLTLVPSAR
Ga0208821_104181333300025432PeatlandLKRHGAVYFHLHPLHAMFSLTTGFVLAVLVVLMLASSAR
Ga0208323_101688413300025439PeatlandMKTRTHLKRHGVVYFHLHPLHAMFSLTTGFVLAVLVVLMLASSAR
Ga0208355_109214913300025581Arctic Peat SoilMRTPMHLKRHGDSYFHLHPLHAVFSLIASFVLAVLIVLTLVPSAR
Ga0207684_1027428833300025910Corn, Switchgrass And Miscanthus RhizosphereLNTLIHLKRHGEVYSKLHPLLDTFSLIASFLLAVLVVLM
Ga0207684_1135593913300025910Corn, Switchgrass And Miscanthus RhizosphereMKTAIHLKRRGESYFHLNPLHAVFSLIASFVLAMLIVFMLVPSAR
Ga0209840_102273443300026223SoilMNTLIHLKRHGEVHFHLHPLLETFSLIASFLLAMLVVLMLVSSAR
Ga0209240_108637623300026304Grasslands SoilPIHLKRRGDSYFHLNPLHAVFSLIASFVLAVLMVLMLVPSAR
Ga0257176_103157213300026361SoilVGEGAFMRTPIHLKRHGDSYFHLHPLHAVFSLIASFVLAVLIVLTLVPSAR
Ga0257159_108940913300026494SoilMRTPIHLKRHGDSYFHLHPLHAVFSLIASFVLAVLIVLTLVLSAR
Ga0209904_100102913300027394Thawing PermafrostFMKTPIHLKRHGDSYFHLHPLHAVFSLMASFVLAVLIMLMLVPSAR
Ga0209009_117255613300027667Forest SoilAAVGEGACMRTPIHLKRHGDSYFHLHPLHAVFSLIASFVLAVLIVLTLVPSAR
Ga0208989_1004043833300027738Forest SoilMKTPIHLKRSGDSYFHLNPLHAMFSLIASFMLAVLIVLML
Ga0208989_1027751313300027738Forest SoilVGEGAFMKTPIHLKRRGDSYFHLNPLHAMFLLIASFVLAVLIVLMLVPSAR
Ga0209180_1026964013300027846Vadose Zone SoilAAVGDGAFMRTPIHLKRHGDSYFHLHPLHAVFSLIASFVLAVLIVLTLVLSAR
Ga0209517_1005146843300027854Peatlands SoilMKTPIHLKRHGDSYFHLHPLHAVFSLIASFVLTVLIVLMLVRSVR
Ga0209701_1021489113300027862Vadose Zone SoilHGDSYFHLHPLHAVFSLIASFVLAVLIVLTLVPSAR
Ga0209701_1026397533300027862Vadose Zone SoilHGDSYFHLHPLHAVFSLIASFVLAVLIVLTLVLSAR
Ga0209283_1007972143300027875Vadose Zone SoilMRTPIHLKRHGDSYFHLHPSHSVFSLIASFVLAVLIVLTLVLSA
Ga0209488_1049690223300027903Vadose Zone SoilAAVCDGAFMRTPIHLKRHGDSYFHLHPLHAVFSLIASFVLAVLIVLTLVLSAR
Ga0209415_10022541133300027905Peatlands SoilMKSLIHLKRHGDSYFHLHPSHAVFPLIASFVLAVLIVLTLVSSAR
Ga0209698_1002449063300027911WatershedsMKTLIHLKRHGDSYFHVHPQHAIFSLVAGFVLAVLVVLVLASSAR
Ga0310913_1070176723300031945SoilMKTLIHLKGHGNSYSHLHPQHAIFSLVAGLMLAVLVVFILVSSAR
Ga0311301_1001232773300032160Peatlands SoilMKTLIHLKRHGGVYFHLHPLHAMFSLIATFVLAVLVVLMLVSSAR
Ga0311301_1120079023300032160Peatlands SoilRHGAVYFHLHPLHAMFSLTTGFVLAVLVVLMLASSAR
Ga0335085_10000938743300032770SoilMKTLLHFKGHGDSYFHLHPQHVIFSVVATLMLTVLVVLILVSSAR
Ga0335085_10019128153300032770SoilMKTLIHFKGHGDGYFQLHPQYVVFSLVASFVLAVLVVLVLVSSAR
Ga0335082_1022816823300032782SoilMRAVVHLKRHGDSYFHFHHLHATFSLLASFVLAVLVVLILVSSAR
Ga0335079_1000403033300032783SoilMMNTFLKPHGNTHFHAHPWHTTFSLIASFLLAGLVVLALASSAR
Ga0335079_1011713823300032783SoilMKTLIHLKRHGNTYFHLHPLHATFSLFAAFLLALLVVLFVASPAR
Ga0335078_1060231043300032805SoilMKTLIHLKRHGNTYFHLHPLHATVSLFAAFLLALLVV
Ga0335078_1081713933300032805SoilLIHVKGHGNSYFHLHPQHAVFSLVASFVLAALVVFILVSSAR
Ga0335070_1002733953300032829SoilMNTLIHFKGHGNGYFHLHPQHAVFSLVASFVLAVLVVLVLISSAR
Ga0335070_1020036413300032829SoilMKTLLHFKGHGDSYFHLHPQHAIFSVVATLMLAVLVVLILVSSAR
Ga0335070_1154931013300032829SoilMKMLIHLKGHGNSYFHLHAQHAVFSLVASFVLAVLVVLVLISSAR
Ga0335081_1004385483300032892SoilMKTLIHLKRHGNTYFHLHPLHATVSLFAAFLLALLVVLFVASPAR
Ga0335069_1008932523300032893SoilMKALIHFKGHGNSYFHLHPQHAIFSLVASLMLAVLVVLILVSSAR
Ga0335084_1075817013300033004SoilMKTLIYLKGHGNSYFHLHPQHAIFSLVASLMFVVLVVLILVLSAR
Ga0335077_1009397043300033158SoilMKTLIYLKGHGNSYFHLHPQHAIFSLVASLMLAVLVVLILVASAR
Ga0335077_1216034713300033158SoilLKDISPRGEEAFMNTLIHVKGHGNSNFHLHPQHALFSLVASIVLAVLTVLILVSSAR
Ga0316624_1039283513300033486SoilLTASAVIGEAPMNTLIHLKRHGEVHFHLHPLLETFSLIASFLLAMLVVLMLVSSAR
Ga0316628_10009100633300033513SoilMKMLIHFKGHGNGYFHLHPQHAVFSLVAGFVLAVLVVLVLVSSAR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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