Metagenome / Metatranscriptome Family F052096

Basic Information
Family ID	F052096
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	72 residues
Representative Sequence	FGQTALSISLSVLTKDIGARRLQIPRRYRQETAELLLKLGAGTLDKTGVVVVLQRSGDLNLGNRVP
Number of Associated Samples	124
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.10 %
% of genes near scaffold ends (potentially truncated)	97.20 %
% of genes from short scaffolds (< 2000 bps)	93.01 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Most Common Taxonomy
Group	Bacteria (83.217 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (10.489 % of family members)
Environment Ontology (ENVO)	Unclassified (29.371 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.958 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.79% β-sheet: 0.00% Coil/Unstructured: 70.21%
Feature Viewer

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Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF00753	Lactamase_B	5.63
PF13620	CarboxypepD_reg	4.93
PF00375	SDF	3.52
PF12796	Ank_2	1.41
PF13193	AMP-binding_C	0.70
PF13442	Cytochrome_CBB3	0.70
PF08240	ADH_N	0.70
PF01103	Omp85	0.70
PF13531	SBP_bac_11	0.70
PF02518	HATPase_c	0.70
PF02687	FtsX	0.70
PF01625	PMSR	0.70
PF00512	HisKA	0.70
PF13709	DUF4159	0.70
PF13384	HTH_23	0.70
PF04909	Amidohydro_2	0.70
PF08327	AHSA1	0.70
PF07237	DUF1428	0.70
PF09084	NMT1	0.70
PF00174	Oxidored_molyb	0.70
PF00903	Glyoxalase	0.70
PF01436	NHL	0.70
PF03401	TctC	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	0.70
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.70
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.70
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.70
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.70
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.70
COG5507	Uncharacterized conserved protein YbaA, DUF1428 family	Function unknown [S]	0.70

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.22 %
Unclassified	root	N/A	16.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.22 %
Unclassified	root	N/A	16.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.22 %
Unclassified	root	N/A	16.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	13.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.99 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.70 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.78 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.49 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.50 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.70 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.99 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	3.50 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.40 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.70 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.70 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.99 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	3.50 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.70 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.70 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.70 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.99 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	3.50 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.70 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.70 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.70 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_101755677	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300003319\|soilL2_10078219	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300003987\|Ga0055471_10212057	Not Available	607	Open in IMG/M
3300004114\|Ga0062593_102152788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	624	Open in IMG/M
3300004156\|Ga0062589_101447542	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300004281\|Ga0066397_10119380	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300005148\|Ga0066819_1014629	Not Available	603	Open in IMG/M
3300005332\|Ga0066388_103781184	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	772	Open in IMG/M
3300005332\|Ga0066388_107783533	Not Available	536	Open in IMG/M
3300005335\|Ga0070666_10216430	All Organisms → cellular organisms → Bacteria	1350	Open in IMG/M
3300005338\|Ga0068868_101643403	Not Available	604	Open in IMG/M
3300005353\|Ga0070669_101107787	Not Available	682	Open in IMG/M
3300005364\|Ga0070673_101702689	Not Available	597	Open in IMG/M
3300005440\|Ga0070705_101361254	Not Available	590	Open in IMG/M
3300005459\|Ga0068867_100263240	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1407	Open in IMG/M
3300005466\|Ga0070685_10518450	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300005466\|Ga0070685_10856679	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	674	Open in IMG/M
3300005543\|Ga0070672_101361941	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300005553\|Ga0066695_10681308	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300005556\|Ga0066707_10842380	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300005558\|Ga0066698_10702834	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300005561\|Ga0066699_10402118	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300005577\|Ga0068857_100297859	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1486	Open in IMG/M
3300005616\|Ga0068852_100628352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1080	Open in IMG/M
3300005764\|Ga0066903_100128231	All Organisms → cellular organisms → Bacteria → Proteobacteria	3556	Open in IMG/M
3300005764\|Ga0066903_104839949	Not Available	716	Open in IMG/M
3300005764\|Ga0066903_108522704	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300005921\|Ga0070766_11086587	Not Available	552	Open in IMG/M
3300005993\|Ga0080027_10366666	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300006041\|Ga0075023_100608286	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300006175\|Ga0070712_100645272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	899	Open in IMG/M
3300006176\|Ga0070765_101844171	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300006806\|Ga0079220_10771001	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300006844\|Ga0075428_101052050	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300006846\|Ga0075430_100793348	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	780	Open in IMG/M
3300006852\|Ga0075433_10377161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1252	Open in IMG/M
3300006852\|Ga0075433_11582049	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300006854\|Ga0075425_100247953	All Organisms → cellular organisms → Bacteria	2049	Open in IMG/M
3300006880\|Ga0075429_101275892	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300006969\|Ga0075419_10055417	All Organisms → cellular organisms → Bacteria	2495	Open in IMG/M
3300009094\|Ga0111539_13278111	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300009098\|Ga0105245_11903584	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300009100\|Ga0075418_12399654	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300009137\|Ga0066709_102613869	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300009156\|Ga0111538_10421986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1690	Open in IMG/M
3300009162\|Ga0075423_12481528	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300009162\|Ga0075423_12735540	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300009610\|Ga0105340_1148382	All Organisms → cellular organisms → Bacteria → Proteobacteria	966	Open in IMG/M
3300009792\|Ga0126374_11889470	Not Available	502	Open in IMG/M
3300009802\|Ga0105073_1044643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300010046\|Ga0126384_11242272	Not Available	689	Open in IMG/M
3300010047\|Ga0126382_12406020	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300010358\|Ga0126370_11753615	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300010373\|Ga0134128_11361460	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300010398\|Ga0126383_11807909	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300011120\|Ga0150983_15933489	Not Available	754	Open in IMG/M
3300011443\|Ga0137457_1112166	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300011445\|Ga0137427_10001462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10648	Open in IMG/M
3300012189\|Ga0137388_11366541	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300012198\|Ga0137364_10848668	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300012198\|Ga0137364_11182210	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300012200\|Ga0137382_10169605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1489	Open in IMG/M
3300012203\|Ga0137399_10387121	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300012203\|Ga0137399_11370970	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300012210\|Ga0137378_11524228	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300012212\|Ga0150985_107367668	Not Available	1287	Open in IMG/M
3300012212\|Ga0150985_118028118	All Organisms → cellular organisms → Bacteria → Proteobacteria	973	Open in IMG/M
3300012231\|Ga0137465_1086985	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300012360\|Ga0137375_11355643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	533	Open in IMG/M
3300012382\|Ga0134038_1058051	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300012406\|Ga0134053_1048893	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300012922\|Ga0137394_10472126	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300012927\|Ga0137416_11188670	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300012927\|Ga0137416_11640706	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300012944\|Ga0137410_10059989	All Organisms → cellular organisms → Bacteria	2734	Open in IMG/M
3300012944\|Ga0137410_11838322	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300012948\|Ga0126375_10812462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300012948\|Ga0126375_11052315	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300012948\|Ga0126375_11218992	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300012971\|Ga0126369_10763597	All Organisms → cellular organisms → Bacteria → Acidobacteria	1047	Open in IMG/M
3300012984\|Ga0164309_11622488	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300014325\|Ga0163163_12994122	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300014326\|Ga0157380_10254488	All Organisms → cellular organisms → Bacteria	1591	Open in IMG/M
3300015371\|Ga0132258_10065364	All Organisms → cellular organisms → Bacteria → Proteobacteria	8408	Open in IMG/M
3300015371\|Ga0132258_10574506	All Organisms → cellular organisms → Bacteria	2828	Open in IMG/M
3300015371\|Ga0132258_12021461	Not Available	1450	Open in IMG/M
3300015373\|Ga0132257_101433392	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300016270\|Ga0182036_10106402	Not Available	1918	Open in IMG/M
3300016294\|Ga0182041_12216102	Not Available	513	Open in IMG/M
3300016445\|Ga0182038_12007056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	524	Open in IMG/M
3300017944\|Ga0187786_10244655	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300017975\|Ga0187782_11189712	Not Available	596	Open in IMG/M
3300018088\|Ga0187771_11287885	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300018422\|Ga0190265_10454689	All Organisms → cellular organisms → Bacteria → Proteobacteria	1387	Open in IMG/M
3300019229\|Ga0180116_1316934	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300019257\|Ga0180115_1150727	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300019259\|Ga0184646_1337432	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300019361\|Ga0173482_10241440	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	764	Open in IMG/M
3300020067\|Ga0180109_1123287	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300020581\|Ga0210399_11562233	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300021151\|Ga0179584_1371304	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300021171\|Ga0210405_10302597	Not Available	1264	Open in IMG/M
3300021377\|Ga0213874_10409673	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300021408\|Ga0193708_1067887	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300021560\|Ga0126371_10140980	All Organisms → cellular organisms → Bacteria	2462	Open in IMG/M
3300022530\|Ga0242658_1043581	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	923	Open in IMG/M
3300022756\|Ga0222622_10498235	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300025885\|Ga0207653_10373634	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300025908\|Ga0207643_10007281	All Organisms → cellular organisms → Bacteria	5936	Open in IMG/M
3300025908\|Ga0207643_10516075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	765	Open in IMG/M
3300025917\|Ga0207660_11128634	Not Available	639	Open in IMG/M
3300025928\|Ga0207700_10655645	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300025933\|Ga0207706_11439559	Not Available	564	Open in IMG/M
3300025940\|Ga0207691_10124284	All Organisms → cellular organisms → Bacteria → Acidobacteria	2284	Open in IMG/M
3300026088\|Ga0207641_10376025	Not Available	1359	Open in IMG/M
3300026089\|Ga0207648_10182564	All Organisms → cellular organisms → Bacteria	1857	Open in IMG/M
3300026325\|Ga0209152_10086895	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300026340\|Ga0257162_1008254	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300026557\|Ga0179587_11039556	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300027880\|Ga0209481_10175451	All Organisms → cellular organisms → Bacteria → Acidobacteria	1065	Open in IMG/M
3300027910\|Ga0209583_10179578	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300028381\|Ga0268264_10755173	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	969	Open in IMG/M
3300030986\|Ga0308154_107013	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300030990\|Ga0308178_1048644	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300031047\|Ga0073995_11851842	Not Available	514	Open in IMG/M
3300031114\|Ga0308187_10168709	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300031421\|Ga0308194_10095644	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	845	Open in IMG/M
3300031421\|Ga0308194_10333504	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300031720\|Ga0307469_10898705	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300031740\|Ga0307468_102045889	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300031747\|Ga0318502_10725603	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300031781\|Ga0318547_11020670	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300031833\|Ga0310917_11014357	Not Available	556	Open in IMG/M
3300031890\|Ga0306925_10722392	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300031954\|Ga0306926_10542645	Not Available	1425	Open in IMG/M
3300032003\|Ga0310897_10510346	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300032059\|Ga0318533_11010373	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300032261\|Ga0306920_103574369	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300032515\|Ga0348332_11927815	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300032515\|Ga0348332_14668031	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300032515\|Ga0348332_14668031	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300034147\|Ga0364925_0423919	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300034354\|Ga0364943_0165012	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.43%
Host-Associated	Host-Associated	26.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.03%
Plants	Host-Associated → Plants	26.57%
Aquatic	Environmental → Aquatic	8.39%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.54%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.49%
Sediment	Environmental → Aquatic → Sediment	4.90%
Freshwater	Environmental → Aquatic → Freshwater	2.80%
Plant Litter	Environmental → Terrestrial → Plant Litter	2.10%
Floodplain	Environmental → Terrestrial → Floodplain	1.40%
Roots	Host-Associated → Plants → Roots	1.40%
Marine	Environmental → Aquatic → Marine	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.15%
Loam	Environmental → Terrestrial → Soil → Loam	11.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.49%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.20%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.20%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.80%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	2.10%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.40%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.70%
Sand	Environmental → Terrestrial → Soil → Sand	0.70%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.70%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.29%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.20%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.10%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	2.10%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.40%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.70%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.70%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.70%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.70%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.70%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.49%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.20%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.50%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.80%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.10%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	2.10%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.10%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.40%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.40%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.40%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.40%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.40%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.40%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.40%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.40%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.70%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.70%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.70%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.70%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.70%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.70%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300005148	Soil and rhizosphere microbial communities from Laval, Canada - mgLMA	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009802	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_50_60	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012231	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012382	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300019229	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_1_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019257	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020067	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT47_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021151	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021408	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c1	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026340	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030986	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_143 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031047	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1017556772	3300002245	Forest Soil	AMDSLGQTPLSISLSVLTKDAGARRLQVPRRYRAETADLLLKLGATPLNKSGVVVVLQRNGDLVAGE*
soilL2_100782192	3300003319	Sugarcane Root And Bulk Soil	KDEFGQTALSISLSVLTREIGARRLQIPRRYRQETAELLLKLGAGTLDKTGVDVVLQRSGDLNLGNRTIQGPDSK*
Ga0055471_102120572	3300003987	Natural And Restored Wetlands	ALSISMSVLTKEIGARRLQIPRRYREDTAKLLLKLGATPLHQSGVNVVLQRSGDENLGKDVPR*
Ga0062593_1021527882	3300004114	Soil	GAKIDQKDEFGQTALSISLSVLTRDIGARRLQIPRRYRQDTAELLLKLGAGTLDKTGVDVILQRSGDLNLGNRAP*
Ga0062589_1014475421	3300004156	Soil	KIDQKDEFGQTALSISLSVLTKDIGARRLQIPRRYRQETAELLLKLGAGTLDKTGVVVVLQRSGDVNLGNRVP*
Ga0066397_101193802	3300004281	Tropical Forest Soil	AFGQTPLSISLAVLVQDIGARRLQIPRRYRKEVAETLLKLGATPLDKSGVIVVLQRTGDLELGREATQE*
Ga0066819_10146292	3300005148	Soil	QMDVFGQTPLSISLAVLTQDIGARRPLIPRRYRKEVAELLLKLGATPLNKSGVVVVLQRTGDEEVGRAQEQ*
Ga0066388_1037811841	3300005332	Tropical Forest Soil	EFGQTALSISLSVLTREIGARRLQIPRRYRQDTAELLLKLGASTLDKTGVDVILQRSGDLNLGNRAP*
Ga0066388_1077835332	3300005332	Tropical Forest Soil	PLSIALSVLTKEAGARRLQVPRRYHKSTSQLLLKLGALPLNQSGVNVVLQRNGDLAAQDE
Ga0070666_102164302	3300005335	Switchgrass Rhizosphere	AKIDQKDEFGQTALSISLSVLTRDIGARRLQIPRRYRQDTAELLLKLGAGTLEKTGVDVILQRSGDLNLGNRTTQSPESKY*
Ga0068868_1016434032	3300005338	Miscanthus Rhizosphere	GAKIDQKDEFGQTALSISLSVLTRDIGARRLQIPRRYREDTAELLLKLGAGTLDKTGVDVILQRSGDLNLGNRTAPGTDSK*
Ga0070669_1011077872	3300005353	Switchgrass Rhizosphere	QKDEFGQTALSISLSVLTRDIGARRLQIPRRYREDTAELLLKLGAGTLDKTGVDVILQRSGDLNLGNRTAPGTDSK*
Ga0070673_1017026891	3300005364	Switchgrass Rhizosphere	VSKGAKIDQKDEFGQTALSISLSVLTRDIGARRLQIPRRYREDTAELLLKLGAGTLDKTGVDVILQRSGDLNLGNRTTQGTDSK*
Ga0070705_1013612541	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	IAMAVLTQDIGARRPQIPRRFRGEVAQLLLKLGATPLDKSGVVVVLQRSGDLDLGRAAEGGGGP*
Ga0068867_1002632401	3300005459	Miscanthus Rhizosphere	SKGAKIDQKDEFGQTALSISLSVLTKDIVARRLQIPRRYRQETAELLLELGAGTLDKTGVVVVLQRSGDVNLGNRVP*
Ga0070685_105184502	3300005466	Switchgrass Rhizosphere	KIDQKDEFGQTALSISLSVLTRDIGARRLQIPRRYRQDTAELLLKLGAGTLEKTGVDVILQRSGDLNLGNRTTQSPESK*
Ga0070685_108566791	3300005466	Switchgrass Rhizosphere	DQKDEFGQTALSISLSVLTKEIGARRLQIPRRYRQDTAELLLKLGASTLDKTGVDVILQRSGDLNLGNRAP*
Ga0070672_1013619411	3300005543	Miscanthus Rhizosphere	TPLSISMSVLTKEIGARRLQIPRRYREDTAKLLLRLGATPVGKSGVNIVLQRSGDENLGAGK*
Ga0066695_106813082	3300005553	Soil	QTPLSISMAVLVQDIGARRLQIPRRYRKEVVELILKLGATPLDKSGVVVILQRTGDLELGREATQQ*
Ga0066707_108423801	3300005556	Soil	YLVSKGAQIDRKDEFGQTALSISLSVLTKDIGARRLQIPRRYREDTAQLLLKLGAGTLDKTGVDVVLQRSGDLNLGKSATQGNDSK*
Ga0066698_107028341	3300005558	Soil	LSISLSVLTKDIGARRLQIPRRYRQETAELLLQLGASSLEKTGVVVILQRSGDLNLGKRVP*
Ga0066699_104021181	3300005561	Soil	DVNQMDVFGQTPLSIALAVLTQDIGARRPLIPRRYRKEVAELLLKAGATPLDRSGVVVVLQRTGDETLGREATQEEQE*
Ga0068857_1002978593	3300005577	Corn Rhizosphere	IDQKDEFGQTALSISLSVLTKDIGARRLQIPRRYRQETAELLLKLGAGTLDKTGVVVVLQRSGDVNLGNRVP*
Ga0068852_1006283522	3300005616	Corn Rhizosphere	QTALSISLSVLTKDIGARRLQIPRRYRQETAELLLKLGAGTLDKTGVVVVLQRSGDVNLGNRVP*
Ga0066903_1001282317	3300005764	Tropical Forest Soil	KGGKLEVKDELGQTPLSIALSVVTKEAGARRLQIPRRYHKSTSQLLLRLGALPLMQSGVNVVIQRNGDLATQDE*
Ga0066903_1048399492	3300005764	Tropical Forest Soil	PLSIALSVLTKEAGARRLQIPRRYHKSTSQLLLKLGALPLNQSGVNVVFQRNGDLAAQDE
Ga0066903_1085227041	3300005764	Tropical Forest Soil	DINHMDNFGQTPLSVAMTILTADIGARRLQIPRRYRKEVVDVLTKLGAKSLQEMGVVVVLQRTGDLD*
Ga0070766_110865871	3300005921	Soil	KDKLGQTPLSISLAILTKEAGAKRLQIPRRYRGEVAQLLLKLGATPISKSGVNVVVQRAGELATQE*
Ga0080027_103666661	3300005993	Prmafrost Soil	KVDAFDKLGQTPLSISLSVLTKDAGARRLQIPRRYRKDTAELLLKLGATPLNKSGVVVVLQRNGDLATGVGE*
Ga0075023_1006082861	3300006041	Watersheds	DVNEMDSFGQTPLSIALAVLVQDIGARRLQIPRRYRRDVAEQLLRLGATPLDKSGVVVVLQRTGDLELGRDGTQE*
Ga0070712_1006452723	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	QTPLSISLSVLTKEIGARRLQIPRRYREETAKLLLKLGATPLKQSGVNVVLQRSGEDVSATNTK*
Ga0070765_1018441712	3300006176	Soil	TPLSISLSVLTKDAGARRLQIPRRFRGDTADLLLKLGATPLNKSGVVVVLQRNGDLVAGD
Ga0079220_107710011	3300006806	Agricultural Soil	DNFGQTPLSISMSVLTKEIGARRLQIPRRFRQETAELLLKLGATPLKKSGVQVVLQRSGDDVSAGK*
Ga0075428_1010520501	3300006844	Populus Rhizosphere	AFGQTPLSISMSILTQDIGARRPQIPRRFRGEVAQLLLKLGATPLDKSGVVVVLQRSGDLDLGRAGGDGGP*
Ga0075430_1007933481	3300006846	Populus Rhizosphere	FGQTALSISLSVLTKDIGARRLQIPRRYRQETAELLLKLGAGTLDKTGVVVVLQRSGDLNLGNRVP*
Ga0075433_103771612	3300006852	Populus Rhizosphere	QTALSISLSVLTRDIGARRLQIPRRYREDTAQLLLKLGAGSLDKTGVDVVLQRSGDLNLGKGTTQGTDSK*
Ga0075433_115820493	3300006852	Populus Rhizosphere	LSVLTKDIGARRLQIPRRYRQETAELLLKLGAGTLDKTGVDVVLQRSGDLNLGKSTTQGTDSK*
Ga0075425_1002479531	3300006854	Populus Rhizosphere	FGQTALSISLSVLTKDIGARRLQIPRRYRQETAELLLKLGAGTLDKTGVVVVLQRSGDVNLGNRVP*
Ga0075429_1012758922	3300006880	Populus Rhizosphere	GDVNEMDAFGQTPLSIAMAVLTQDIGARRPQIPRRFRGEVAQLLLKLGATPLDKSGVVVVLQRSGDLDLGRGEGGGP*
Ga0075419_100554171	3300006969	Populus Rhizosphere	LVSKGANIDQKDEFGQTALSISLSVLTKDIGARRLQIPRRYREETAQLLLKLGAGTLDKTGVVVVLQRSGDLNLGNRGAQETSSGESPR*
Ga0111539_132781111	3300009094	Populus Rhizosphere	PLSISLSVLTRDIGARRLQIPRRYRQDTAELLLKLGAGTLDKTGVDVILQRSGDLNLGNRTTQSPDSK*
Ga0105245_119035841	3300009098	Miscanthus Rhizosphere	LSVLTRDIGARRLQIPRRYRQDTAELLLKLGAGTLEKTGVDVILQRSGDLNLGNRTTQSPESK*
Ga0075418_123996542	3300009100	Populus Rhizosphere	TALSISLSVLTRDIGARRLQIPRRYRQDTAELLLKLGAGTLDKTGVDVILQRSGDLNLGNRTTQSPDSK*
Ga0066709_1026138691	3300009137	Grasslands Soil	QTPLSISLSVLTKDIGARRLQIPRRYRQETAQLLLKLGASTLEKTGVVVILQRSGDLELGNRARDR*
Ga0111538_104219861	3300009156	Populus Rhizosphere	IDQKDEFGQTALSISMSVLTKEIGARRLQIPRRYREDTAKLLLKLGATPLQKSGVNIVLQRSGDENLGNPNAPK*
Ga0075423_124815281	3300009162	Populus Rhizosphere	EFGQTALSISLSVLTRDIGARRLQIPRRYRQETAELLLKLGAGTLDKTGVDVILQRSGDLNLGNRTIQGPDSK*
Ga0075423_127355402	3300009162	Populus Rhizosphere	DAFGQTPLSIAMAVLTQDIGARRPQIPRRFRGEVAQLLLKLGATPLDKSGVVVVLQRSGDLDLGRAAGEGGGGP*
Ga0105340_11483821	3300009610	Soil	EYLVGKGAKIDQKDEFGQTALSISLSVLTKDIGARRLQIPRRYRQETAELLLKSGAGTLEKTGVVVILQRSGDLELGNRASQETPVGESPR*
Ga0126374_118894701	3300009792	Tropical Forest Soil	EMDVFGQTPLSISLAILTQDIGARRPLIPRRYRKEVAELLLKLGATPLDRSGVVVVLQRTGDETLGRAQEEQQ*
Ga0105073_10446432	3300009802	Groundwater Sand	AYLVSKGAKIDQKDEFGQTALSISLSVLTKDIGARRLQIPRRYRQETAELLLSLGAGTLDKTGVVVVLQRSGDLNLGNRVP*
Ga0126384_112422721	3300010046	Tropical Forest Soil	LLIDRGAKTETKDKLGQTPLSISLAILTKEAGAKRLQIPRRFRGEVAQVLLKKGATPLMQSGVNIVVQRAGELVTQE*
Ga0126382_124060201	3300010047	Tropical Forest Soil	DILSYLVSKGGDINAKDDFGQTALSISLSVLTKEIGARRLQIPRRYREDTAKLILALGATPLDKSGVNVVLQRSGDENLGKSKQ*
Ga0126370_117536151	3300010358	Tropical Forest Soil	GQTPLSISLSVVTKEAGARRLQIPRRYHKSTAQLLLRLGATPLNKSGVHIVLQRNGDIATDE*
Ga0134128_113614601	3300010373	Terrestrial Soil	QKDNFGQTPLSISMSVLTKEIGARRLQIPRRYREDTAKLLLRLGATPLQKSGVNVVLQRSGDENLGAGK*
Ga0126383_118079092	3300010398	Tropical Forest Soil	PNIEYLVGKGAKIDQKDDFGQTALSISLSVLTKEIGARRLQIPRRYREDTAKLILALGATPLDKSGVNVVLQRSGDENLGKSKQ*
Ga0150983_159334892	3300011120	Forest Soil	KDKLGQTPLSISLSVLTKEAGARRLQIPRRYRAEGAQLLLQLGATPLMQSGGNIVVQRAGELATQE*
Ga0137457_11121662	3300011443	Soil	SKGAKIDQKDEFGQTPLSITLSVLTKDIGARRLQIPRRYRPEVAQLLLKLGASTLDKTGVVVILQRSGDLELGNRAPQ*
Ga0137427_1000146216	3300011445	Soil	EFGQTALSISMSVLTKDIGARRLQIPRRYREDTAKLLLKLGATPLKESGVVVVLQRSGDENLGEKKQ*
Ga0137388_113665411	3300012189	Vadose Zone Soil	INEMDAFGQTPLSISLAVLVQDIGARRLQIPRRYRKEVADLLLKLGATPLDKSGVVVVLQRTGDLELGREATQE*
Ga0137364_108486682	3300012198	Vadose Zone Soil	GQTPLSISLAVLTQDIGARRLQIPRRYRKDVAELLLKLGATPLDKSGVVVVLQRTGDLELGREATQQ*
Ga0137364_111822101	3300012198	Vadose Zone Soil	AFGQTPLSIALTVLTRDIGARRLQIPRRYKREVVELILKLGATPLNKSGVVVVDQRNGDLELGREATQE*
Ga0137382_101696051	3300012200	Vadose Zone Soil	KDNFGQTPLSISLSVLTKEIGARRLQIPRRYREETAKTILKLGATPLDKSGVNVVLQRSGDENLGLSKVNK*
Ga0137399_103871213	3300012203	Vadose Zone Soil	IDQKDEFGQTALSISLSVLTKDIGARRLQIPRRYREETAQLLLKLGASTLDATGVNVVLQRSGDLNLGNRTTQGTDSK*
Ga0137399_113709701	3300012203	Vadose Zone Soil	FDQLGQTPLSISLSVLTKDAGARRLQIPRRFRGETADLLLKLGATPLNKSGVVVVLQRNGDLVAGE*
Ga0137378_115242281	3300012210	Vadose Zone Soil	GQTPLSIALAVLVQDIGARRLQIPRRYRRDVAEQLLRLGATPLDKSGVVVVLQRTGDLELGRDGTQE*
Ga0150985_1073676681	3300012212	Avena Fatua Rhizosphere	TPLSIAMAVLTQDIGARRPLIPRRFRRDVAELLLKLGATPLDKSGVVVVLQRTGDEDLGRATQDQQ*
Ga0150985_1180281182	3300012212	Avena Fatua Rhizosphere	NEMDSFGQTPLSISLAVLVQDIGARRLQIPRRYRKEVAELLLKLGATPLDKSGVVVVLQRTGDLELGRDGTQE*
Ga0137465_10869852	3300012231	Soil	LSIAMAVLTQDIGARRPQIPRRFRGEVAQLLLKLGATPLDKSGVVVVLQRSGDLDLGRGEGGGP*
Ga0137375_113556431	3300012360	Vadose Zone Soil	KDEFGQTALSISLSVLTKDIGARRLQIPRRYREDTAQLLLKLGAGTLDKTGVDVVLQRSGDLNLGKSATQGTDSK*
Ga0134038_10580512	3300012382	Grasslands Soil	MDVFGQTPLSISLAILTQDIGARRPLIPRRYRKEVAELLLKLGATPLDRSGVVVVLQRTGDETLGRAQEEQQ
Ga0134053_10488932	3300012406	Grasslands Soil	GAKIDQKDEFGQTPLSISLSVLTKDIGARRLQIPRRYRQETAQLLLKLGASTLEKTGVVVILQRSGDLELGNRARDR*
Ga0137394_104721261	3300012922	Vadose Zone Soil	KGAKIDQKDEFGQTALSISLSVLTKDIGARRLQIPRRYREETAQLLLKLGASTLDATGVNVVLQRSGDLNLGNRTTQGTDSK*
Ga0137416_111886702	3300012927	Vadose Zone Soil	QKDEFGQTALSISLSVLTKDIGARRLQIPRRYREETAQLLLKLGASTLDATGVNVVLQRSGDLNLGNRTTQGTDSK*
Ga0137416_116407062	3300012927	Vadose Zone Soil	PLSIALSVLTKDAGARRLQIPRRYRGDTAELLLKLGATPLDKSGVVVVLQRTGDLELGRDGTQE*
Ga0137410_100599891	3300012944	Vadose Zone Soil	KDELGQTPLSIALSVVTKEAGARRLQIPRRYHKDTSELLLKLGALPLKDSGVNVVLQRNGDLVATEE*
Ga0137410_118383221	3300012944	Vadose Zone Soil	SKGANINEMDAFGQTPLSIGMAVLVQDIGARRLQIPRRYRREVVDLILKLGATALDKSGVEVVLQRTGDLELGRETTNE*
Ga0126375_108124622	3300012948	Tropical Forest Soil	GQTPLSISLSVLTKEIGARRLQIPRRYRQETAELLVKLGASTLEKTGVAVILQRSGDVNLGNRVP*
Ga0126375_110523152	3300012948	Tropical Forest Soil	FGQTPLSISLAVLVQDIGARRLQIPRRYRKEVAETLLKLGATPLDKSGVIVVLQRTGDLELGREEKEKTQE*
Ga0126375_112189922	3300012948	Tropical Forest Soil	AKIDQKDEFGQTALSISLSVLTKDIGARRLQIPRRYRQDTAELLLKLGADTLDHTGVNVVLQRSGDLNLGNRTTQGTDSK*
Ga0126369_107635972	3300012971	Tropical Forest Soil	SKGANIDQKDSFGQTALSISLSVLTKEIGARRLQIPRRYRQETAELLLSLGASSLEKTGVVVVLQRSGDVNLGNRAP*
Ga0164309_116224881	3300012984	Soil	KDEFGQTALSISLSVLTRDIGARRLQIPRRYREDTAELLLKLGAGTLDKTGVDVILQRSGDLNLGNRATQSPESK*
Ga0163163_129941221	3300014325	Switchgrass Rhizosphere	GAKIDQKDEFGQTALSISLSVLTRDIGARRLQIPRRYRQDTAELLLKLGASTLDKTGVDVILQRSGDLNLGNRAP*
Ga0157380_102544881	3300014326	Switchgrass Rhizosphere	KGANIDQKDEFGQTALSISLSVLTKDIGARRLQIPRRYRQETAELLLKLGAGTLDKTGVVVVLQRSGDVNLGNRVP*
Ga0132258_1006536411	3300015371	Arabidopsis Rhizosphere	LSISLSVLTKEIGARRLQIPRRYRQETAELLLKMGAGTLEKTGVNVVLQRSGDLNLGNRVVTNP*
Ga0132258_105745061	3300015371	Arabidopsis Rhizosphere	ALSISLSVLTRDIGARRLQIPRRYRQDTAELLLKLGAGTLDKTGVDVILQRSGDLNLGNRAP*
Ga0132258_120214611	3300015371	Arabidopsis Rhizosphere	KDEFGQTALSISLSVLTRDIGARRLQIPRRYRQETAELLLKLGAGTLEKTGVVVVLQRSGDLNLGNRVP*
Ga0132257_1014333921	3300015373	Arabidopsis Rhizosphere	NINEMDAFGQTPLSIGMAVLVQDIGARRLQIPRRYRKEVVELILKLGATPLDKSGVVVILQRTGDLELGREANQ*
Ga0182036_101064021	3300016270	Soil	PLSISLAILTEDIGARRPLIPRRYRKDVAELLLKLGATPLDRSGVVVVLQRTGDETLGRAQEEQQ
Ga0182041_122161022	3300016294	Soil	FGQTPLSISLAILTQDIGARRPLIPRRYRKEVAELLLKLGATPLDRSGVVVVLQRTGDETLGRAQEEQQ
Ga0182038_120070561	3300016445	Soil	PLSISMSVLVKDIGDRRLQIPRKFRRETAELLLKLGATPLERSGVAVVLQRTVRVQRLLWIPGQP
Ga0187786_102446551	3300017944	Tropical Peatland	VNEMDSFGQTPLSIALAVLVQDIGARRLQIPRRYRRDVAELLLKLGATPLDKSGVVVVL
Ga0187782_111897122	3300017975	Tropical Peatland	SKGANVNAMDGFRQTPLSISLSVLTKEAGAHRLQIPRRYRPEVADLLLKMGAIPLDKSGVNVVLTRSGAAANANE
Ga0187771_112878851	3300018088	Tropical Peatland	AFDKLGQTPLSISLSVLTKDAGAKRLQIPRRYRRETAELLLHLGATPLNKSGVQVVLQRNGDLATGVGE
Ga0190265_104546891	3300018422	Soil	QMDEFGQTPLSISMSVLTKDIGARRLQIPRRYREDTAKLLLKLGATPLKESGVVVVLQRSGDENLGEKK
Ga0180116_13169341	3300019229	Groundwater Sediment	VSKGANIDQKDEFGQTALSISLSVLTKDIGARRLQIPRRYREETAQLLLKLGAGTLDKTGVAVVLQRSGDLNLGNRVP
Ga0180115_11507273	3300019257	Groundwater Sediment	DQKDEFGQTPLSITLSVLTKDIGARRLQIPRRYRPEVAQLLLKLGATPLKDSGVVVVLQRSGNEADGLTPK
Ga0184646_13374322	3300019259	Groundwater Sediment	FGQTALSISLSVLTKDIGARRLQIPRRYRQETAELLLKLGASTLDKTGVVVVLQRSGDLELGNRGLQETPSGGSPR
Ga0173482_102414401	3300019361	Soil	KIDQKDEFGQTALSISLSVLTRDIGARRLQIPRRYRQDTAELLLKLGAGTLDKTGVDVILQRSGDLNLGNRAP
Ga0180109_11232872	3300020067	Groundwater Sediment	QTALSISMSVLTKEIGARRLQIPRRYREDTAKLLLKLGATPLHESGVNVVLQRSGDLELGNRAAP
Ga0210399_115622331	3300020581	Soil	SKGAKIDAFDQLGQTPLSISLSVLTKDAGARRLQIPRRYLKETAELLLRLGATPLNRSGVVIVLQRNGDLVAGE
Ga0179584_13713042	3300021151	Vadose Zone Soil	VNEMDAFGQTPLSISMSVLTQDIGARRLQIPRRFRGDVAQLLLDLGATPLDKSGVVVVLQRSGDLDFGRAGDTPEAGAGAQQ
Ga0210405_103025972	3300021171	Soil	DSFRQTPLSISLSVLTKEAGANRLQIPRRYRPEVAALLLKLGATPLEKSGLNVVLQRSGAPAAAAEQQQQ
Ga0213874_104096732	3300021377	Plant Roots	QTPLSISLSVLTKEAGARRLQVPRRYRGDTAELLLKLGATPLNRSGVNVVLQRNGDLVAG
Ga0193708_10678872	3300021408	Soil	VDQMDEFGQTPLSISMSVLTKDIGARRLQIPRRYREDTAKLLLRLGATPLKESGVQVVLQRSGDENLGEKKTAQ
Ga0126371_101409801	3300021560	Tropical Forest Soil	TLDQLGQTPLSISLSVLTKEAGARRLQIPRRYLKETAELLLRLGATPLNKSGVHIVLQRNGDLVAGE
Ga0242658_10435811	3300022530	Soil	LIDRGAKTETKDKLGQTPLSISLAILTKAAGAKRLQIPRRYRGEVAQVLLKKGATPLMQSGVNIVVQRAGELVTQE
Ga0222622_104982351	3300022756	Groundwater Sediment	SISLAVLVQDIGARRLQIPRRYRKEVAELLLKLGATPLDKSGVIVVLQRTGDLELGREEKGEQE
Ga0207653_103736342	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	AKIDQKDEFGQTALSIPLSVLTRDIGARRLQIPRRYRQDTAELLLKLGAGTLEKTGVDVILQRSGDLNLGNRTTQSPESK
Ga0207643_100072815	3300025908	Miscanthus Rhizosphere	FGQTALSISLSVLTKEIGARRLQIPRRYRQDTAELLLKLGAGTLEKTGVDVILQRSGDLNLGNRTTQSPESK
Ga0207643_105160752	3300025908	Miscanthus Rhizosphere	FGQTALSISLSVLTKEIGARRLQIPRRYRQDTAELLLKLGASTLDKTGVDVILQRSGDLNLGNRAP
Ga0207660_111286341	3300025917	Corn Rhizosphere	AFGQTPLSIAMAVLTQDIGARRPQIPRRFRGEVAQLLLKLGATPLDKSGVVVVLQRSGDLDLGRAAEGGGGP
Ga0207700_106556453	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	KDNFGQTPLSISLSVLTKEIGARRLQIPRRFRKDVAETLLKLGATPLKQSGVNVVLQRSGDDVSATK
Ga0207706_114395592	3300025933	Corn Rhizosphere	DEFGQTALSISLSVLTRDIGARRLQIPRRYREDTAELLLKLGAGTLDKTGVDVILQRSGDLNLGNRTAPGTDSK
Ga0207691_101242841	3300025940	Miscanthus Rhizosphere	SKGAKIDQKDEFGQTALSISLSVLTRDIGARRLQIPRRYRQDTAELLLKLGASTLDKTGVDVILQRSGDLNLGNRAP
Ga0207641_103760251	3300026088	Switchgrass Rhizosphere	GAKIDQKDEFGQTALSISLSVLTRDIGARRLQIPRRYREDTAELLLKLGAGTLDKTGVDVILQRSGDLNLGNRTAPGTDSK
Ga0207648_101825643	3300026089	Miscanthus Rhizosphere	GAKIDQKDEFGQTALSISLSVLTKDIGARRLQIPRRYREDTAQLLLKLGASTLDKTGVDVVLQRSGDLNLGKSTTPGPDSK
Ga0209152_100868952	3300026325	Soil	AKLDAVDKLGQTPLSISLSVLTKEAGAKRLQIPRRYWGDTALLLLKLGATSLMKSGVNVVLLRNGDLATQE
Ga0257162_10082542	3300026340	Soil	LSIALSVVTKEAGARRLQIPRRYHKDTSELLLRLGALPLKDSGVNVVLQRNGELAAQDE
Ga0179587_110395561	3300026557	Vadose Zone Soil	TMDSLGQTPLSISLSVLTKDAGARRLQVPRRYRAETAELLLKLGATPLNKSGVVVVLQRNGDLVAGE
Ga0209481_101754511	3300027880	Populus Rhizosphere	LVSKGANIDQKDEFGQTALSISLSVLTKDIGARRLQIPRRYREETAQLLLKLGAGTLDKTGVVVVLQRSGDLNLGNRGAQETSSGESPR
Ga0209583_101795782	3300027910	Watersheds	RYIQTLAWLERGSSGTNEMDSFGQTPLSIALAVLVQDIGARRLQIPRRYRRDVAEQLLRLGATPLDKSGVVVVLQRTGDLELGRDGTQE
Ga0268264_107551732	3300028381	Switchgrass Rhizosphere	DQKDEFGQTALSISLSVLTKDIGARRLQIPRRYRQETAELLLKLGAGTLDKTGVVVVLQRSGDVNLGNRVP
Ga0308154_1070131	3300030986	Soil	DEMDSFGQTPLSISLSVLTRDIGARRLQIPRRYRKDVSELLLKLGATPLAQSGVDVVLVRSGDLND
Ga0308178_10486441	3300030990	Soil	MDSFGQTPLSISLAVLVQDIGARRLQIPRRYRKEVAELLLRLGATPLDKSGVVVVLQRTGDLELGRDGTQE
Ga0073995_118518421	3300031047	Soil	GLTDVIELLVTKGAKTETKDKLGQTPLSISLAILTKEAGAKRLQIPRRYRGEVAQVLLKMGATPLMQSGVNIVVQRAGELVTQE
Ga0308187_101687091	3300031114	Soil	EFGQTALSISLSVLTKDIGARRLQIPRRYREDTAQRLLRLGAGTLDKTGVVVVLQRSGDLELGNRGSASLPTK
Ga0308194_100956442	3300031421	Soil	VIAYLVSKGAKIDQKDEFGQTALSISLSVLTKDIGARRLQIPRRYREDTAQLLLNLGASTLDKTGVVVILQRSGDLELGNRSSSPTK
Ga0308194_103335042	3300031421	Soil	FGQTPLSIALTILTKDIGARRLQIPRRYKKEVVDLLLKLGASSLEKTGVVVVLQRTGDLT
Ga0307469_108987051	3300031720	Hardwood Forest Soil	AKIDQKDEFGQTALSISLSVLTKDIGARRLQIPRRYRQETAELLLKLGAGTLDKTGVDVVLQRSGDLNLGKSATATDSK
Ga0307468_1020458891	3300031740	Hardwood Forest Soil	LSISLSVLTREIGARRLQIPRRYREDTAQLLLKLGASSLDQTGVDVILQRSGDLNLGKGTTAVPESK
Ga0318502_107256032	3300031747	Soil	AKTDQKDEFGQTPLSISLSVLTKDIGARRLQIPRRYRQETAELLLKLGASSLEKTGVVVILQRSGDLNLGNRVP
Ga0318547_110206702	3300031781	Soil	GQTALSISMSVLVKDIGDRRLQIPRKFRKETAELLLKLGATPLERSGVAVVLQRTGDLQLGE
Ga0310917_110143571	3300031833	Soil	TPLSIALSVVTKEAGARRLQIPRRYHKSTAQLLLRLGALPLKDSGVNVVLQRNGDLVATE
Ga0306925_107223922	3300031890	Soil	KIDAFDELGQTPLSVSLSVLTKEAGARRLQIPRRYRGDTAELLLKLGATPLARSGVHVVLQRNGDLVAGE
Ga0306926_105426453	3300031954	Soil	MDVFGQTPLSISLAILTEDIGARRPLIPRRYRKDVAELLLKLGATPLDRSGVVVVLQRTGDETLGRAQEEQQ
Ga0310897_105103461	3300032003	Soil	GANIDQKDEFGQTALSISLSVLTKDIGARRLQIPRRYREETAQLLLKLGAGTLDKTGVVVVLQRSGDLNLGNRAAQETSSGESPR
Ga0318533_110103732	3300032059	Soil	KIDAFDQLGQTPLSISLSVLTKDAGARRLQIPRRYLKETAELLLRLGATPLNRSGVVVVLQRNGDLVPSE
Ga0306920_1035743691	3300032261	Soil	DAFDELGQTPLSVSLSVLTKEAGARRLQIPRRYRGDTAELLLKLGATPLARSGVHIVLQRNGDLVAGE
Ga0348332_119278152	3300032515	Plant Litter	QTPLSISLSILTKEAGARRLQIPRRYRGEVAQLLLKLGATPISKSGVNVVVQRAGELATQ
Ga0348332_146680311	3300032515	Plant Litter	SKGAKLETKDELGQTPLSISLSILTKEAGARRLQIPRRYRGDVAQLLLNLGAKPLKDSGVNVVLQRNGDLVNTQD
Ga0348332_146680312	3300032515	Plant Litter	SKGAKLETKDELGQTPLSISLSILTKEAGARRLQIPRRYRGEVAQLLLNLGAKPLKDSGVNVVLQRNGDLVTQD
Ga0364925_0423919_17_211	3300034147	Sediment	LSISLSVLTKEIGARRLQIPRRYRQETAELLLNLGAGTLEKTGVNVVLQRSGDLNLGNRVVTNP
Ga0364943_0165012_550_768	3300034354	Sediment	MDAFGQTPLSIAMAVLTQDIGARRPQIPRRFRGEVAQLLLKLGATPLDKSGVVVVLQRSGDLDLGRGEGGGP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052096

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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