Metagenome Family F052089

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F052089
Family Type	Metagenome
Number of Sequences	143
Average Sequence Length	75 residues
Representative Sequence	MTTITRTFGRLWISALPLVVLFAVASTIANAETRIGTASSVTPEASGSVGGTLSAGSGVHANETVKTGSSGKAGLQFN
Number of Associated Samples	80
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	97.84 %
% of genes near scaffold ends (potentially truncated)	90.21 %
% of genes from short scaffolds (< 2000 bps)	90.21 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (87.413 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.364 % of family members)
Environment Ontology (ENVO)	Unclassified (65.035 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.035 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 31.13% β-sheet: 0.00% Coil/Unstructured: 68.87%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF06577	EipA	1.40
PF03401	TctC	0.70
PF13545	HTH_Crp_2	0.70
PF13192	Thioredoxin_3	0.70
PF04851	ResIII	0.70
PF01370	Epimerase	0.70
PF06035	Peptidase_C93	0.70
PF06568	DUF1127	0.70
PF01590	GAF	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.70
COG3672	Predicted transglutaminase-like protein	Posttranslational modification, protein turnover, chaperones [O]	0.70
COG5457	Uncharacterized conserved protein YjiS, DUF1127 family	Function unknown [S]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.41 %
All Organisms	root	All Organisms	12.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.41 %
cellular organisms	root	All Organisms → cellular organisms	12.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.41 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	12.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.70 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.41 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.09 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.41 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.80 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.40 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.41 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.40 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.70 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.41 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.40 %
Actinomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae	0.70 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.41 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.40 %
Actinomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces	0.70 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.41 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.40 %
unclassified Actinomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces → unclassified Actinomyces	0.70 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.41 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.40 %
Actinomyces sp. S4-C9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces → unclassified Actinomyces → Actinomyces sp. S4-C9	0.70 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.70 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1019464	Not Available	1080	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10101040	Not Available	711	Open in IMG/M
3300004633\|Ga0066395_10000751	All Organisms → cellular organisms → Bacteria	12013	Open in IMG/M
3300005332\|Ga0066388_108631679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	507	Open in IMG/M
3300005436\|Ga0070713_101496690	Not Available	655	Open in IMG/M
3300005437\|Ga0070710_11238258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces → unclassified Actinomyces → Actinomyces sp. S4-C9	553	Open in IMG/M
3300005764\|Ga0066903_102492566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1001	Open in IMG/M
3300005764\|Ga0066903_103064876	Not Available	905	Open in IMG/M
3300005764\|Ga0066903_104110644	Not Available	779	Open in IMG/M
3300005764\|Ga0066903_104120661	Not Available	778	Open in IMG/M
3300005764\|Ga0066903_108921349	Not Available	508	Open in IMG/M
3300006086\|Ga0075019_10944407	Not Available	555	Open in IMG/M
3300006175\|Ga0070712_101109840	Not Available	687	Open in IMG/M
3300006954\|Ga0079219_10388377	Not Available	918	Open in IMG/M
3300009012\|Ga0066710_104304854	Not Available	532	Open in IMG/M
3300010048\|Ga0126373_10848337	Not Available	977	Open in IMG/M
3300010359\|Ga0126376_12669024	Not Available	548	Open in IMG/M
3300010360\|Ga0126372_11334581	Not Available	747	Open in IMG/M
3300010360\|Ga0126372_13268904	Not Available	504	Open in IMG/M
3300010361\|Ga0126378_10537348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1284	Open in IMG/M
3300010361\|Ga0126378_11837955	Not Available	689	Open in IMG/M
3300010366\|Ga0126379_10556428	Not Available	1227	Open in IMG/M
3300010366\|Ga0126379_13743121	Not Available	510	Open in IMG/M
3300010376\|Ga0126381_101247467	Not Available	1074	Open in IMG/M
3300010376\|Ga0126381_101571887	Not Available	950	Open in IMG/M
3300010376\|Ga0126381_102446348	Not Available	749	Open in IMG/M
3300010376\|Ga0126381_103195973	Not Available	648	Open in IMG/M
3300010376\|Ga0126381_104791294	Not Available	520	Open in IMG/M
3300010376\|Ga0126381_105148608	Not Available	500	Open in IMG/M
3300010398\|Ga0126383_12774056	Not Available	572	Open in IMG/M
3300012948\|Ga0126375_12040401	Not Available	508	Open in IMG/M
3300016270\|Ga0182036_10726908	Not Available	805	Open in IMG/M
3300016270\|Ga0182036_11931331	Not Available	501	Open in IMG/M
3300016294\|Ga0182041_12143896	Not Available	522	Open in IMG/M
3300016319\|Ga0182033_11147510	Not Available	695	Open in IMG/M
3300016319\|Ga0182033_11256068	Not Available	664	Open in IMG/M
3300016319\|Ga0182033_11923875	Not Available	538	Open in IMG/M
3300016357\|Ga0182032_10327658	Not Available	1218	Open in IMG/M
3300016371\|Ga0182034_11233615	Not Available	651	Open in IMG/M
3300016371\|Ga0182034_11529377	Not Available	585	Open in IMG/M
3300016371\|Ga0182034_11672460	Not Available	560	Open in IMG/M
3300016371\|Ga0182034_11927318	Not Available	522	Open in IMG/M
3300016387\|Ga0182040_10715486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	819	Open in IMG/M
3300016387\|Ga0182040_10977329	Not Available	705	Open in IMG/M
3300016404\|Ga0182037_11580360	Not Available	583	Open in IMG/M
3300016422\|Ga0182039_10013693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4798	Open in IMG/M
3300016422\|Ga0182039_10879495	Not Available	799	Open in IMG/M
3300016422\|Ga0182039_11449315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	624	Open in IMG/M
3300016445\|Ga0182038_11083559	Not Available	712	Open in IMG/M
3300016445\|Ga0182038_11086677	Not Available	711	Open in IMG/M
3300017999\|Ga0187767_10291983	Not Available	553	Open in IMG/M
3300018058\|Ga0187766_10126678	Not Available	1569	Open in IMG/M
3300018058\|Ga0187766_10180188	Not Available	1326	Open in IMG/M
3300018058\|Ga0187766_10286502	Not Available	1063	Open in IMG/M
3300018062\|Ga0187784_10051371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3337	Open in IMG/M
3300021168\|Ga0210406_11022970	Not Available	613	Open in IMG/M
3300021478\|Ga0210402_11377092	Not Available	633	Open in IMG/M
3300021560\|Ga0126371_10644714	Not Available	1208	Open in IMG/M
3300021560\|Ga0126371_11154022	Not Available	913	Open in IMG/M
3300021560\|Ga0126371_12377784	Not Available	641	Open in IMG/M
3300025898\|Ga0207692_10780257	Not Available	624	Open in IMG/M
3300025928\|Ga0207700_11319641	Not Available	643	Open in IMG/M
3300027703\|Ga0207862_1063094	All Organisms → cellular organisms → Bacteria → Acidobacteria	1115	Open in IMG/M
3300027703\|Ga0207862_1134526	Not Available	741	Open in IMG/M
3300031231\|Ga0170824_100025614	Not Available	665	Open in IMG/M
3300031544\|Ga0318534_10443216	Not Available	744	Open in IMG/M
3300031546\|Ga0318538_10538525	Not Available	633	Open in IMG/M
3300031572\|Ga0318515_10461759	Not Available	679	Open in IMG/M
3300031573\|Ga0310915_10113266	Not Available	1846	Open in IMG/M
3300031573\|Ga0310915_11039907	Not Available	570	Open in IMG/M
3300031668\|Ga0318542_10444499	Not Available	672	Open in IMG/M
3300031679\|Ga0318561_10030560	Not Available	2595	Open in IMG/M
3300031708\|Ga0310686_100756497	Not Available	708	Open in IMG/M
3300031719\|Ga0306917_10927839	Not Available	681	Open in IMG/M
3300031719\|Ga0306917_11373926	Not Available	545	Open in IMG/M
3300031736\|Ga0318501_10856245	Not Available	505	Open in IMG/M
3300031744\|Ga0306918_10914706	Not Available	683	Open in IMG/M
3300031744\|Ga0306918_11069774	Not Available	625	Open in IMG/M
3300031744\|Ga0306918_11179494	Not Available	592	Open in IMG/M
3300031744\|Ga0306918_11345039	Not Available	548	Open in IMG/M
3300031747\|Ga0318502_10980463	Not Available	515	Open in IMG/M
3300031748\|Ga0318492_10206334	Not Available	1007	Open in IMG/M
3300031751\|Ga0318494_10662456	Not Available	611	Open in IMG/M
3300031754\|Ga0307475_10911845	Not Available	694	Open in IMG/M
3300031754\|Ga0307475_11211379	Not Available	588	Open in IMG/M
3300031768\|Ga0318509_10085405	Not Available	1680	Open in IMG/M
3300031770\|Ga0318521_10743124	Not Available	597	Open in IMG/M
3300031777\|Ga0318543_10382478	Not Available	631	Open in IMG/M
3300031777\|Ga0318543_10547560	Not Available	518	Open in IMG/M
3300031793\|Ga0318548_10446446	Not Available	633	Open in IMG/M
3300031794\|Ga0318503_10003514	Not Available	3611	Open in IMG/M
3300031796\|Ga0318576_10150520	Not Available	1085	Open in IMG/M
3300031819\|Ga0318568_10867210	Not Available	559	Open in IMG/M
3300031835\|Ga0318517_10427300	Not Available	598	Open in IMG/M
3300031845\|Ga0318511_10000723	All Organisms → cellular organisms → Bacteria → Proteobacteria	7762	Open in IMG/M
3300031845\|Ga0318511_10424744	Not Available	610	Open in IMG/M
3300031879\|Ga0306919_10224635	Not Available	1405	Open in IMG/M
3300031879\|Ga0306919_11115119	Not Available	601	Open in IMG/M
3300031879\|Ga0306919_11237854	Not Available	566	Open in IMG/M
3300031879\|Ga0306919_11313215	Not Available	547	Open in IMG/M
3300031880\|Ga0318544_10295910	Not Available	628	Open in IMG/M
3300031890\|Ga0306925_10840936	Not Available	949	Open in IMG/M
3300031890\|Ga0306925_10922197	Not Available	897	Open in IMG/M
3300031897\|Ga0318520_11011732	Not Available	525	Open in IMG/M
3300031910\|Ga0306923_10283190	Not Available	1895	Open in IMG/M
3300031910\|Ga0306923_10348530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1689	Open in IMG/M
3300031910\|Ga0306923_10933266	Not Available	948	Open in IMG/M
3300031910\|Ga0306923_10934853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	947	Open in IMG/M
3300031912\|Ga0306921_10315401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1830	Open in IMG/M
3300031912\|Ga0306921_11369243	Not Available	779	Open in IMG/M
3300031912\|Ga0306921_12051569	Not Available	607	Open in IMG/M
3300031941\|Ga0310912_10290124	Not Available	1265	Open in IMG/M
3300031941\|Ga0310912_11225605	Not Available	570	Open in IMG/M
3300031942\|Ga0310916_10077400	Not Available	2620	Open in IMG/M
3300031942\|Ga0310916_10250590	Not Available	1492	Open in IMG/M
3300031942\|Ga0310916_10638748	Not Available	903	Open in IMG/M
3300031947\|Ga0310909_10122534	Not Available	2113	Open in IMG/M
3300031947\|Ga0310909_10184744	Not Available	1727	Open in IMG/M
3300031947\|Ga0310909_11328506	Not Available	577	Open in IMG/M
3300031947\|Ga0310909_11584241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	520	Open in IMG/M
3300031954\|Ga0306926_10579188	Not Available	1372	Open in IMG/M
3300031954\|Ga0306926_12385197	Not Available	584	Open in IMG/M
3300032001\|Ga0306922_11402238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	702	Open in IMG/M
3300032001\|Ga0306922_12090234	Not Available	549	Open in IMG/M
3300032035\|Ga0310911_10111394	Not Available	1511	Open in IMG/M
3300032035\|Ga0310911_10288497	Not Available	943	Open in IMG/M
3300032043\|Ga0318556_10006706	Not Available	4543	Open in IMG/M
3300032068\|Ga0318553_10274840	Not Available	881	Open in IMG/M
3300032076\|Ga0306924_11822105	Not Available	633	Open in IMG/M
3300032261\|Ga0306920_100265353	Not Available	2560	Open in IMG/M
3300032261\|Ga0306920_100675577	Not Available	1523	Open in IMG/M
3300032261\|Ga0306920_100683500	All Organisms → cellular organisms → Bacteria	1513	Open in IMG/M
3300032261\|Ga0306920_101093792	Not Available	1156	Open in IMG/M
3300032261\|Ga0306920_101487653	Not Available	967	Open in IMG/M
3300032261\|Ga0306920_102660932	Not Available	684	Open in IMG/M
3300032261\|Ga0306920_103404025	Not Available	590	Open in IMG/M
3300033289\|Ga0310914_10580959	Not Available	1011	Open in IMG/M
3300033289\|Ga0310914_11250548	Not Available	644	Open in IMG/M
3300033289\|Ga0310914_11599595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	555	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.30%
Aquatic	Environmental → Aquatic	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.30%
Sediment	Environmental → Aquatic → Sediment	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.31%
Loam	Environmental → Terrestrial → Soil → Loam	9.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	69.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.29%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.70%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.07%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.29%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.20%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.10%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.40%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.70%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10194641	3300000580	Forest Soil	MTMITRTLGRLWIFALPLVIVFAEQASGSVGGTLAAGSGVHANETG*
AF_2010_repII_A1DRAFT_101010401	3300000597	Forest Soil	MTTITRTFGRLWISALPLVVLLAMVPTVANAETRIGTASSVTPEASGSVGGTLSAGSGVHANETVKTGSSGKAGLQFHDQSNLSVGPSSQVRLDKF
Ga0066395_1000075120	3300004633	Tropical Forest Soil	MTMITRTLGRLWIFALPLVIVFAAPTVANAQTGIRTVSSVTPQASGSVGGTLAAGSGVHANETG*
Ga0066388_1086316791	3300005332	Tropical Forest Soil	MTTITTTFSRLLISAPLLVLFAVTTTVANAETRIGTAQSVKPDASGSIAGTLSAGSGVHANETVETGSSGQAGLQFNDQSNLSVGPSSQV
Ga0070713_1014966902	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTTITRTFGRLWISALPLVVFFAVAPSVANAQTRIGTANSVQPEASGSVAGTLSAGSGVHANETVNTGTS
Ga0070710_112382581	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTTITTTFGRLWIPALLLVLFAVTSTVANAQTRIGTAQSVKPDASGSVAGTLSAGSGVHANETVKTGSSGQ
Ga0066903_1024925662	3300005764	Tropical Forest Soil	MTTITTTFGPLLISAPLLMLFAPTSTVANAETRIGTASSVTPEASGSFGGTLSAGSGVHANETVKT
Ga0066903_1030648761	3300005764	Tropical Forest Soil	MRTITTRICGLLCIWTLLVAVTSTVANAETRIGTASSVQPEASGSVAGTLSAGSGVHANETVKTGSSG
Ga0066903_1041106441	3300005764	Tropical Forest Soil	MRTTTTKTFGPLCICVLLLAVTSTVANAQTRIGTANSVQPEASGSVAGTLSAGSGVHANETVRTGS
Ga0066903_1041206613	3300005764	Tropical Forest Soil	MTAIARTLGRLWPSTLPLVVLFAVASTVANAETRIGSATSVQPEASGSVGGTMSVGSGVHANETVKTGS
Ga0066903_1089213492	3300005764	Tropical Forest Soil	MRTITTRTFGLLCICALLLAVTSARANAQTRIGTASSVTPEASGSVGGTLSAGSGVHANETVKTGSSGKAGLQFHDQ
Ga0075019_109444072	3300006086	Watersheds	MTMITRTFGRLWIFPLPLVLFAMTLTVANAQTKIGTAQSVKPQAEGSVAGTLAAGSGVHANETVKTGNSGQAGLQFHDQSNL
Ga0070712_1011098401	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MITITRTVDRLWISALPLVVLLAAAPTVANAQTRIGTANSVQPEASGSVGGTLSAGSGVHANETVKTGSSGQA
Ga0079219_103883771	3300006954	Agricultural Soil	MRTITTRTCGPLCICALLLAVTSTVANAQARIGTANSVQPEASGSIAGTLSAGSGVHANETVKTGSSGGRVCSLMTRAT*
Ga0066710_1043048542	3300009012	Grasslands Soil	MTMITRTFGRLWIFPLPLVLFAMTLTVANAQTKIGTAQSVKPQAEGSVAGTLAAGSGVHG
Ga0126373_108483371	3300010048	Tropical Forest Soil	MTTITRTFGRLWISALPLVVLLAMVPTVANAETRIGTASSVTPEASGSVGGTLSAGSGVHANETVKTGSSGKAGLQFHDQSN
Ga0126376_126690241	3300010359	Tropical Forest Soil	MRTITTRTFGLLCICTLLLAMTSTLANAQTRIGTASSVTPEASGSVGGTLSAGSGVHANETVKTGSSGKAGLQF
Ga0126372_113345811	3300010360	Tropical Forest Soil	MRTITTRTCGLLYIYALLLAVTPSVADAQTRIGAATSVQREASGSVGGTMSVGSGVHANETVKTGSSGKAGLQ
Ga0126372_132689041	3300010360	Tropical Forest Soil	MRAITTRTCGSLYICALLLLALTATAANGQTRIGSATSVQPEASGSVGGTMSVGSGVHANETVKTGSSGKAGLQFHDQSNLSVGPS
Ga0126378_105373483	3300010361	Tropical Forest Soil	MTTITRTFGRLWISALPLVVLLAMVPTVANAETRIGTASSVTPEASGSVGGTLSAGSGVHANETVKTGSSGKA
Ga0126378_118379551	3300010361	Tropical Forest Soil	MTTITRTFGWLWISALPLVVLFAVAPTVANAETRIGTASSVTPEASGSVGGTLSAGSGVHANETVKTGSSGKAGLQFHDQSNLSVGPSSQV
Ga0126379_105564281	3300010366	Tropical Forest Soil	MTTITKTFGRLWISTLPLVVLFAVASTVANAETRIGTASSVTPEASGSVGGTLSAGSGVHANETVKTGSSGKAGLQFHDQSN
Ga0126379_137431211	3300010366	Tropical Forest Soil	MTIITRTFGRLWISALPLVVSLAVVPTDANAQTRIGSASSVTPEASGSVGGTLAVGTGVHANETIKTGSSGQAGLQFNDQSNLTV
Ga0126381_1012474671	3300010376	Tropical Forest Soil	MITITRTINQLWISALPLVVLFAVVPTAADAQTRIGSASSVTPEASGSVGGTLSVGSGVHANETIKTGSS
Ga0126381_1015718873	3300010376	Tropical Forest Soil	MINKRAFRRFSISALPLVVFFAIGSAVANAETIGSATSVQPEASGSMGGTLSVGSGVQANETVKTGSSGKAGLQFHDQS
Ga0126381_1024463481	3300010376	Tropical Forest Soil	MRTITTRTCGLLYICALLLAVTPSVANAQTRIGSATSVQPEASGSVGGTMSVGSGVHANETVKTGSSG
Ga0126381_1031959731	3300010376	Tropical Forest Soil	MRAITTRTCGSLYICALLLALTATAANGQTRIGSATSVQPEASGSVGGTMSVGSGVHANETVKTGSSGK
Ga0126381_1047912941	3300010376	Tropical Forest Soil	MTTITRTLGRLWISALPMVILVAVVPTAADAQTRIGSASSVTPEASGSVGGTLAVGTGVHANETIKTGSSGQTGLQFNDQSNLTVGHSSVVRLDKFVNDPNKGTGSTVIDV
Ga0126381_1051486082	3300010376	Tropical Forest Soil	MTTMTTTFGRLLISAPLLVLFAVTTTVANAETRIGTAQSVKPDASGSIAGTLSAGSGVHANETVETGSSGQAGLQFNDQSNLSVGPSSQVRL
Ga0126383_127740562	3300010398	Tropical Forest Soil	MTTIRRTFGRLWTSALPLVVLFAVAPTVANAETRIGTAQSVQPEASGGAGTLSAGNGVHANETVRTGSSGHVGLQ
Ga0126375_120404012	3300012948	Tropical Forest Soil	RTLGRLWIFALPLVIVFAAPTVANAQTGIRTVSSVTPQASGSVGGTLAAGSGVHANETG*
Ga0182036_107269082	3300016270	Soil	MTAIARTFGRFWLSALPLVVLFAVAPTAANAQARIGSAQSVQPEASGSIAGTLSAGSGVHANETVRIGSSGQAGLQFNDQSNLSVG
Ga0182036_119313312	3300016270	Soil	MTTITRTFGWLWISALPLVMFIAAPTVANAETRIGTASSVTPEASGSVGGTLSAGSGVHANETVKTGSSGKAG
Ga0182041_121438962	3300016294	Soil	MRTITTRTFGLLCICALLLAVTPTRAHAQPRIGTASSVTPEASGSVGGTLSAGSGVHANETVKTGSSGKAGLQFHDQS
Ga0182033_111475102	3300016319	Soil	MTTITRTFGRLWISALPLVVFLAVSPTVANAQTRIGSASSVTPEASGSVAGTLSAGSGVHANETIKTGSSGK
Ga0182033_112560681	3300016319	Soil	MRTITTRTCGLLYICALLLAVTPSVANAQTRIGSATSVQPEASGSVGGTLSVRRGVHANETVQPGSSCQAGLRFHDQSNPSVGHSSQV
Ga0182033_119238752	3300016319	Soil	MTTIATTAGRLLISAPLLVLFAMTSTVANAQTKIGTASSVTPEASGSVGGALSAGSGVHANETVKTGSSGKAGLQFHDQS
Ga0182032_103276584	3300016357	Soil	MRTITTRTFGLFCICALLLAVTSTAANAQTRIGTANSVQPEASGSVAGTLSAGSGVHANETVKTGTSGKAGL
Ga0182034_112336152	3300016371	Soil	MRAVTTRMCVPLYICVLLLALTASAANAQTRIGSATSVQPEASGSVEGTMSVGSGVHANETVKTGSSGKAGLQFH
Ga0182034_115293772	3300016371	Soil	MRTITTRTFGLVCICTLLLAGTSTLANAQTRIGTASSVTPEASGSVGGTLSAGSGVHANETVKTGSSGKAGLQFHDQSNLSV
Ga0182034_116724602	3300016371	Soil	MTNTRTFGRLSISAVPLVVFFAIGSTVANAQTIGSATSVQPEASGSIGGTLSVGSGVHANETVRTGSSG
Ga0182034_119273181	3300016371	Soil	MNTITKTFGRLWISTLPLVVLFAVSPTIANAQTRIGAASSVTPEASGSVAGTLSAGSGVHANETIKTGSSGK
Ga0182040_107154862	3300016387	Soil	LGTTTFGRLWIPALLVVLVTSTVANAQTRIGTAQSVKPDASGSVAGKLSAGSGVHANETVKTGSTGQAGLQFND
Ga0182040_109773291	3300016387	Soil	MTTITRTFGRLWISALPLVVFLAVSPTVANAQTRIGSASSVTPEASGSVAGTLSAGSGVHANETIKTGSSGKAGLQFNDQS
Ga0182040_112313053	3300016387	Soil	MTTITRTFGRLWISALVALFATASTVAKAQTRIGTAQSVKPDASSSVAGTLSAGSGVHAN
Ga0182037_115803602	3300016404	Soil	MRTITTRTCGLLYICALLLAVTPSVANAQTRIGSATSVQPEASGSVGGTMSVGSGVHANETVKTGSSGKAGLQFHDQS
Ga0182039_100136936	3300016422	Soil	MRTIITTRTSGLLCICALLLAATSTVANAQARIGTASPVKPEASGSIAGTLSAGSGVHASESIRTGSSGQADLRFLD
Ga0182039_108794951	3300016422	Soil	MTTITRTFGRLWISALPLVVFLAVSPTVANAQTRIGSASSVTPEASGSVAGTLSAGSGVHANETIKTGS
Ga0182039_114493152	3300016422	Soil	MTTIATTAGRLLISAPLLVLFAMTSTVAQAHTKIGTASSVTPEASGSVGGALSAGSGVHANETVKTGSSGKAGLQFNDQS
Ga0182038_110835591	3300016445	Soil	VTTITKTLGRLWISALPLVVFFAAPTVANAQTRIGTASSVTPDASGSIGGILSAGSGVHINETVKTESSGRAGLQFNDQS
Ga0182038_110866773	3300016445	Soil	VTTITKIFGRLRISALPLVVLFAVASTVANAETRIGTAQSVQPEASGGAGILSAGNGIHANETVRTGSSGQVGLQFNDQSNLTVG
Ga0187783_106461502	3300017970	Tropical Peatland	MRSRDFTLAIVLVVWCALQSTASIAQTRIGTANSVKPEATGSIAGTLSAGSGVHASENVQTGSSGQADLRFLDNSNL
Ga0187767_102919831	3300017999	Tropical Peatland	MSTNTRTFGRLWISTVPLLVVFAIGSTVANAQTRIGTANSVKPEASGSIAGTLSVGSGVQKFVYDPNKGTGTMAI
Ga0187766_101266781	3300018058	Tropical Peatland	MGTSTRTFGRVCISALPLVLLLAITSTVANAQTRIGTANSVKPEASGSIAGTLSVGSGVHANETVKT
Ga0187766_101801881	3300018058	Tropical Peatland	MSTNTRTFGRLWISTVPLLVVFAIGSTVANAQTRIGTAQSVKPEASGSIAGTLSAGNGVHASETVHTGSSGQADL
Ga0187766_102865021	3300018058	Tropical Peatland	MSTNTRILGRLSIFALPLLLVFATGLTAASAQTIGTANSVKPEASGSIAGTLSAGSGVHANETVKTGSTGQAGLQFNDHSNLTV
Ga0187784_100513711	3300018062	Tropical Peatland	MTTNTGTLGRHWISAVPLVVLFAIGSTAANAQTRIGTANFVKPEASGSITGTLSAGSGVHANENVQTGSSGQADLRF
Ga0210406_110229701	3300021168	Soil	MTTIKRTFGRLWFSALPLVVLFAVASTVANAQTRIGSTTSVQPEASGSVAGTLSAGSGVHANETVKTGSS
Ga0210402_113770921	3300021478	Soil	MTMITRTLGRLWIFPLSLVVFAMTLTVANAQTKIGTAQSVKPQAEGSVAGTLAAG
Ga0126371_106447141	3300021560	Tropical Forest Soil	MTMITRTLGRLWIFALPLVIVFAAPTVANAQTGIRTVSSVTPQASGSVGGTLAAGSGVHANETG
Ga0126371_111540222	3300021560	Tropical Forest Soil	MGAVTTRNCVPLYICGLLLALTASAANAQTRIGSATSVQPEASGSVGGTMSVGSGVHANETVKTGSSGKA
Ga0126371_123777841	3300021560	Tropical Forest Soil	VTTITKTLGRHWISALPLVVFFAAPTVASAQTRIGTASSVTPDASGSIGGTLSAGSGVHVNETVKTGTAGKAGLQFSDQST
Ga0207692_107802571	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MTTITTTFGRLWIPALLLVLFAVTSTVANAQTRIGTAQSVKPDASGSVAGTLSAGSGVHANETVKTGSSGQAGLQFNDQSNLNVGP
Ga0207700_113196412	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTTITRTFGRLWISALPLVVFFAVAPSVANAQTRIGTANSVQPEASGSVAGTLSAGSGVHANETVNTGTSGKAGLQF
Ga0207862_10630942	3300027703	Tropical Forest Soil	MTTITRTFGRLWISALLLVVLFAVASTIANAETRIGTASSVTPEASGSVEGTLSAGSGVHANETIKTGSSGKAGLQFND
Ga0207862_11345262	3300027703	Tropical Forest Soil	MNTIASKFGRLWISALPLVVLFAVEPTVANAETRIGTANSVQPEASGSIAGTLFAGSGVHANETVKTGSSGKAGLQFNDQSNLSVGSSSQVR
Ga0170824_1000256142	3300031231	Forest Soil	MQSRILMPALALAVLFALQSTASNAQSRIGTANSVRPEASGSVAGTLAAGSGVHANETVKTGSFGQAGLQFNDQSNLSVG
Ga0318534_104432161	3300031544	Soil	MTMITRTLGRLWIFALPLVIVFGAPTVANAQTGIRTVSSVTPQASGSVGGTLAAGSGVHANETG
Ga0318538_105385252	3300031546	Soil	MTTIIRTVHWLWISALPLVLLFALVPTAVDAQTRIGSASSVTPEASGSVGGTLSTGSGVHANETIKTGSSGKAGMQFNDQSNLN
Ga0318515_104617591	3300031572	Soil	MTAIARTFGRVWLSALPLVVLFAVAPTAANAQARIGTAQSVKPEASGSIAGTLSAGSGVHASETVRTGSSGQAGLRFVDNSNL
Ga0310915_101132663	3300031573	Soil	MTAIARTFGRVWLSALPLVVLFAVAPTAANAQARIGTAQSVKPEASGSIAGTLSAGSGVHASETVRTGSSGQAGLR
Ga0310915_110399071	3300031573	Soil	MTAIARTFGRFWLSALPLVVLFAVAPTAANAQARIGTAQSVRPEASGSIAGTLSAGSGVHASETVRTGSCGQAGLRFVDN
Ga0318542_104444992	3300031668	Soil	MRTITTRICGLLCIWTLLVAVTSTVANAETRIGTASSVQPEASGSVAGTLSAGSGVHANETVKTGSSGRAGLQ
Ga0318561_100305601	3300031679	Soil	MRIIMTRTFGLLCICALLLAVTSTAANAETRIGTASSVTPEASGSVGGTLSAGSGVHANETVKTGSSGKAGLQFNDQ
Ga0310686_1007564971	3300031708	Soil	MTTNTGTFGRHWLSALPLVVLFAIGSTVTNAQTRIGTANSVKPEASGSIAGTLSAGSGVHANETIKT
Ga0306917_109278392	3300031719	Soil	MHRNLMPAVALAILFAFYSTASNAQTRIGSATSVQPEASGSVGGTMAVGSGVHANETVKTGSSGKAGLQFHDQSNLNVGPSSQV
Ga0306917_113739261	3300031719	Soil	MTTITRTFGRIWISALPLVVLFAVASTMANAETRIGTASSVTPEASGSVGGTLSAGSGVHANETVKTGSSGKAGLQ
Ga0318501_108562451	3300031736	Soil	MRTITTRTFGLLCICALLLALTATAANAQTRIGSATSVQPEASGSVGGTMSVGSGVHANETVKTGSSGKAGLQFHD
Ga0306918_109147062	3300031744	Soil	MNTITRTFGGLRISALPLVLFFAVASTVANAETRIGTAQSVKPEASGSIAGTLSAGSGVHASETVRTGSSGQAGLRFVDNS
Ga0306918_110697742	3300031744	Soil	MNTITKTFGRLWISTLPLVVLFAVSPTIANAQTRIGAASSVTPEASGSVAGTLSAGSGVHANETIKTGSSGKAGLQFNDQSNLSIGP
Ga0306918_111794941	3300031744	Soil	MRTITTRTCGLLYICALLLAVTPSVANAQTRIGSATSVQPEASGSVGGTMSVGSGVHANETVKTGSSGKADLQFHDQSNLSVGPSSQVRLD
Ga0306918_113450391	3300031744	Soil	MTAIARTFGRFWLSALPLVVLFAVAPTAANAQARIGTAQSVRPEASGSIAGTLSAGSGVHASETVRTGSSGQAGL
Ga0318502_109804631	3300031747	Soil	MRTITTRTFGLLCICALLLALTATAANAQTRIGSATSVQPEASGSVGGTMSVGSGVHANETVKTGSS
Ga0318492_102063341	3300031748	Soil	MRTITTRTFGLFCICALLLAVTSTAANAQTRIGTANSVQPEASGSVAGTLSAGSGVHANETVKTGT
Ga0318494_106624561	3300031751	Soil	MRTITTRTFGLFCICALLLAVTSTAANAQTRIGTANSVQPEASGSVAGTLSAGSGVHANETVKTGSSGKAGLQFHDQSNLSVGPS
Ga0307475_109118451	3300031754	Hardwood Forest Soil	MRTITTRACGLLYVCALLLAVTSTVANAQTRIGTANSVQPEASGSVGGTLSAGSGVHANETVKTGSS
Ga0307475_112113792	3300031754	Hardwood Forest Soil	MTTIKRTFGRLWFSALPLVVLFAVASTVANAQTRIGSTTSVQPEASGSVAGTLSAGSGVHANETVKTGS
Ga0318509_100854053	3300031768	Soil	MITITRTINQLWISALPLVVLFAVVPTAADAQTRIGSASSVTPEASGSVGGTLSVGSGVPARRACGSMTRAT
Ga0318521_107431242	3300031770	Soil	MTAIARTFGRFWLSALPLVVLFAVASTVANAETRIGTAQSVNPEASGGAGTLSAGSGVHANETVRTGSSGQAGL
Ga0318543_103824781	3300031777	Soil	MRAITTRTCVPLYICVLVLALTASAANAQTRIGSATSVQPEASGSVGGTMSVGSGVHANETVKTGSSGRAGLQFH
Ga0318543_105475601	3300031777	Soil	MRTITTRICGLLCIWTLLVAVTSTVANAETRIGTASSVQPEASGSVAGTLSAGSGVHANETVKTGSSGRAGLQFND
Ga0318548_104464462	3300031793	Soil	MTTIIRTVHWLWISALPLVLLFALVPTAVDAQTRIGSASSVTPEASGSVGGTLSTGSGVHANETIKTGSSGKAGMQFNDQSN
Ga0318503_100035141	3300031794	Soil	MTMITRTLGRLWIFALPLVIVFAAPTVANAQTGIRTVRSVTPQASGSVGGTLAAGSGVHANETG
Ga0318576_101505202	3300031796	Soil	MTTIIRTVHWLWISALPLVLLFALVPTAVDAQTRIGSASSVTPEASGSVGGTLSTGSGVHANETIKTGH
Ga0318568_108672101	3300031819	Soil	MTAIARTFGRFWLSALPLVVLFAVAPTAANAQARIGTAQSVKPEASGSIAGTLSAGSGVHASETVRTGSSGQAGLRFVDNSNL
Ga0318517_104273001	3300031835	Soil	MRTITTRICGLLCIWTLLVAVTSTVANAETRIGTASSVQPEASGSVAGTLSAGSGVHANETVKTGSSGRAGLQFN
Ga0318511_100007239	3300031845	Soil	MTMITRTLGRLWIFALPLVIVFAAPTVANAQTGIRTVSSVTLQASGSVGGTLAAGSGVHANETG
Ga0318511_104247441	3300031845	Soil	MTTIIRTVHWLWISALPLVLLFALVPTAVDAQTRIGSASSVTPEASGSVGGTLSTGSGVHANET
Ga0306919_102246351	3300031879	Soil	MNTITRTFGGLRISALPLVLFFAVASTVANAETRIGTAQSVKPEASGSIAGTLSAGSGVHASETVRTGSSGQAG
Ga0306919_111151192	3300031879	Soil	MITITRTVDRLWISALPLVVLLAAAPTVANAQTRIGTANSVQPEASGSVAGTLSAGSGVH
Ga0306919_112378542	3300031879	Soil	MTAIARTFGRVWLSALPLVVLFAVAPTAANAQARIGTAQSVKPEASGSIAGTLSAGSGVHASETVRTGSSGQAG
Ga0306919_113132151	3300031879	Soil	MTAIARTFGRFWLSALPLVVLFAVAPTAANAQARIGTAQSVRPEASGSIAGTLSAGSGVHASETVRTGS
Ga0318544_102959101	3300031880	Soil	MRTITTRTFGLFCICALLLAVTATAANAQTRIGTANSVQPEASGSVAGTLSAGSGVHANETVKT
Ga0306925_108409361	3300031890	Soil	MRAVTTRMCVPLYICVLLLALTASAANAQTRIGSATSVQPEASGSVGGTLSAGSGVHANETVKTGSSGKAGLQFHDQSNLNVGP
Ga0306925_109221972	3300031890	Soil	MNTITRTFGGLRISALPLVLFFAVASTVANAETRIGTAQSVKPEASGSIAGTLSAGSGVHASETVRTGSS
Ga0318520_110117321	3300031897	Soil	MTTITRTFDRLWISALPLVVLFAVASTIANAETRIGTASSVTPEASGSVGGTLSAGSGVHANETVKTGSSGKAGLQFN
Ga0306923_102831901	3300031910	Soil	MRAITTRTCVPLYICVLVLALTASAANAQTRIGSATSVQPEASGSVGGTMSVGSGVHANETVKTGSSGKAGLQFHDQSNLSVGP
Ga0306923_103485302	3300031910	Soil	MTTIATTFGRLWIPALLVVLFAVTSTVADAQTRIGTAQSVKPDASGSVAGTLSAGSGVDANETVKTGSTG
Ga0306923_109332662	3300031910	Soil	MRTITTRTSGPLCICALLLAVTSTVANAQTRIGSANSVQPEASGSVAGTLSAGSGVHANETVRTGSSGRAGLQF
Ga0306923_109348531	3300031910	Soil	MRTITTRAFGLLCICALLLALTVTAANAQTRIGSATSVQPEASGSVGGTMSVGSGVHANETVKTGSSGQAGLRFNDQSNL
Ga0306921_103154011	3300031912	Soil	MTTISTTFGRLWIPALLVVLFAVTSTVANAQTRIGTAQSVRPDASGSVAGTLSAGSGVHANETVKTGSTGQAGLQFNDHSNLSVGPS
Ga0306921_113692431	3300031912	Soil	MTAIARTFGRVWLSALPLVVLFAVAPTAANAQARIGTAQSVKPEASGSIAGTLSAGSGVHASETVRTGSSGQAGLRFVD
Ga0306921_120515691	3300031912	Soil	MNTITRTFGGLRISALPLVLFFAVASTVANAETRIGTAQSVKPEASGSIAGTLSAGSGVHASETVRTGSSGQAGLRFVD
Ga0310912_102901242	3300031941	Soil	MRTITTRTFGLVCICTLLLAVTSTLANAQTRIGTASSVTPEASGSVGGTLSAGSGVHANETVKTGSSGKAGLQFHDQSNL
Ga0310912_112256051	3300031941	Soil	MRAITTRTCVPLYICVLVLALTASAANAQTRIGSATSVQPEASGSVGGTMSVGSGVHANETVKTGSSGKAGLQFHDRSNLRV
Ga0310916_100774005	3300031942	Soil	MTTIIRTVHWLWISALPLVLLFALVPTAVDAQTRIGSASSVTPEASGSVGGTLSTGSGVHANETIKTGSSGKAGMQFNDQS
Ga0310916_102505902	3300031942	Soil	MTTIARTFGPLWIFALALVVFFAVAPTLANAQTRIGTASSVTPEASGSVGGTLSAGSGVHANETV
Ga0310916_106387481	3300031942	Soil	MTTITRTFGRLWISALPLVVLFAVASTIANAETRIGTASSVTPEASGSVGGTLSAGSGVHANETVKTGSSGKAGLQFN
Ga0310909_101225341	3300031947	Soil	MNTIMKTFGGLRISALPLVLFFAVASTVANAETRIGTAQSVKPEASGSIAGTLSAGSGVHASETVRT
Ga0310909_101847441	3300031947	Soil	VTTITKTLGRLWISALPLVVFFAAPTVANAQTRIGTASSVTPDASGSIGGTLSAGSGVHTNETVKTGSFGKAGLQFSDQSTLSV
Ga0310909_113285061	3300031947	Soil	MRTITTRTFGLLCICALLLALTATAANAQTRIGSATSVQPEASGSVGGTMSVGSGVHANETVKTGSSGKAGLQFHDQSNLSVG
Ga0310909_115842411	3300031947	Soil	MTAIARTFGRFWLCALPLVVLFAVASRVANAETRIGTAQSIKPEASGSIAGALSAGSGVHANETI
Ga0306926_105791883	3300031954	Soil	MRTITTRTFGLVCICTLLLAVTSTLANAQTRIGTASSVTPEASGSVGGTLSAGSGVHANETVKTGSSGKAGLQFHD
Ga0306926_123851971	3300031954	Soil	MTAIARTFGRFWLSALPLVVLFAVAPTAANAQARIGTAQSVRPEASGSIAGTLSAGSGVHASETVRTGSSGQAGLRFVDNSN
Ga0306922_114022382	3300032001	Soil	MTTIATTAGRLLISAPLLVLFAMTSTVANAQTKIGTASSVTPEASGSVGGALSAGSGVHANETVKTGSSGKAGL
Ga0306922_120902341	3300032001	Soil	MTTNTRTTFGRHWFSALPLVVLFAIGSTVANAETRIGTANSIKPEASGSIAGTLSAGSGVHANETVKNRK
Ga0310911_101113941	3300032035	Soil	VTTITKTLGRLWISALPLVVFFAAPTVANAQTRIGTASSVTPDASGSIGGTLSAGSGVHTNE
Ga0310911_102884973	3300032035	Soil	MRTITTRTFGLFCICALLLAVTSTAANAQTRIGTANSVQPEASGSVAGTLSAGSGVHANETVKTGSSGKAGLQFHDQSN
Ga0318556_100067066	3300032043	Soil	MTMITRTLGRLWIFALPLVIVFAAPTVANAQTGIKTVSSVTPQASGSVGGTLAAGSGVHANETG
Ga0318553_102748402	3300032068	Soil	MRTITTRICGLLCIWTLLVAVTSTVANAETRIGTASSVQPEASGSVAGTLSAGSGVHANETVKTGSSGRAGLQFNDQSN
Ga0306924_118221051	3300032076	Soil	MTAIARTFGRFWLSALPLVVLFAVAPTAANAQARIGTAQSVRPEASGSIAGTLSAGSGVHASETVRTGSSGQAG
Ga0318518_102667043	3300032090	Soil	MRTITTRTFGLFCICALLLAVTSTAANAQTRIGTANSVQPEASGSVAGTLSAGSGVHANETVK
Ga0306920_1002653537	3300032261	Soil	MNTIMKTFGGLRISALPLVLLFTVASTVANAETRIGTASSVKPEASGSIAGTLSAGSGVHAS
Ga0306920_1006755771	3300032261	Soil	MRTITTRTFGLFCICALLLAVTSTAANAQTRIGTANSVQPEASGSVAGTLSAGSGVHANETVKTG
Ga0306920_1006835003	3300032261	Soil	MRTITTRTFGLVCICTLLLAVTSTLANAQTRIGTASSVTPEASGSVGGTLSAGSGVHANETVKTGSSGKAGLQFHDQSNLSVG
Ga0306920_1010937921	3300032261	Soil	MTAIARTFGRFWLSALPLVVLFAVAPTAANAQARIGTAQSVRPEASGSIAGTLSAGSGVHASETVRTGSSGQAGLRFVDNSNLT
Ga0306920_1011550941	3300032261	Soil	MTTITTTFGRLLISAPLLVLFTVTSTVANAETRIGTANSAQPEASGSVAGTLSAGSGV
Ga0306920_1014876531	3300032261	Soil	MNTITRTFGGLRISALPLVLFFAVASTVANAETRIGTAQSVKPEASGSIAGTLSAGSGVHASETVRTGSSGQAGLRFVDNSNLT
Ga0306920_1026609321	3300032261	Soil	MTAIARTFGRVWLSALPLVVLFAVAPTAANAQARIGTAQSVKPEASGSIAGTLSAGSGVHASETVRTGSSGQAGLRF
Ga0306920_1034040251	3300032261	Soil	MTTITRTFDRLWISALPLVVLFAVASTMANAETRIGTASSVTPEASGSVGGTLSAGSGVHAN
Ga0310914_105809591	3300033289	Soil	MNTITRTFGGLRISALPLVLFFAVASTVANAETRIGTAQSVKPEASGSIAGTLSAGSGVHASETVRTGSSGQAGLRFVDNSN
Ga0310914_112505482	3300033289	Soil	MTAIARTFGRVWLSALPLVVLFAVAPTAANAQARIGTAQSVKPEASGSIAGTLSAGSGVHASETVRTGSS
Ga0310914_115995952	3300033289	Soil	MTTIATTAGRLLISAPLLVLFAMTSTVAQAHTKIGTASSVTPEASGSVGGALSAGSGVHANET

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F052089

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences