Metagenome / Metatranscriptome Family F052059

Basic Information
Family ID	F052059
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	87 residues
Representative Sequence	MTTDVSAALATLQLHPDDSQALKALASLHPGNGAGIDADVLSKALSDARRFHRERGDYELVVSLIDLELAWTTEAARRGDLLHEKGR
Number of Associated Samples	125
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	38.73 %
% of genes near scaffold ends (potentially truncated)	96.50 %
% of genes from short scaffolds (< 2000 bps)	97.20 %
Associated GOLD sequencing projects	115
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Most Common Taxonomy
Group	Unclassified (60.140 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (12.587 % of family members)
Environment Ontology (ENVO)	Unclassified (41.958 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (54.545 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.52% β-sheet: 0.00% Coil/Unstructured: 43.48%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
a.118.8.1: Tetratricopeptide repeat (TPR)	d1ya0a1	1ya0	0.73334
a.118.8.9: TPR-like repeats from PCI (proteasome / COP9 signalosome / eIF3) domains	d3txna1	3txn	0.71039
a.118.1.2: HEAT repeat	d1b3ua_	1b3u	0.70457
a.118.8.1: Tetratricopeptide repeat (TPR)	d5o9zg_	5o9z	0.68993
a.118.1.1: Armadillo repeat	d1wa5c_	1wa5	0.68973

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF00664	ABC_membrane	38.46

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
All Organisms	root	All Organisms	39.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
cellular organisms	root	All Organisms → cellular organisms	39.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	18.88 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	5.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	18.88 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	5.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	6.29 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	5.59 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2.80 %
Bradymonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Bradymonadales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6.29 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	5.59 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.70 %
Bradymonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Bradymonadales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6.29 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	5.59 %
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	0.70 %
Bradymonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Bradymonadales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6.29 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	5.59 %
Corallococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Corallococcus	0.70 %
Bradymonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Bradymonadales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.14 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6.29 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	5.59 %
Corallococcus coralloides	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Corallococcus → Corallococcus coralloides	0.70 %
Bradymonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Bradymonadales	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000953\|JGI11615J12901_11912047	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	585	Open in IMG/M
3300002568\|C688J35102_120839876	All Organisms → cellular organisms → Bacteria → Proteobacteria	1767	Open in IMG/M
3300003321\|soilH1_10323683	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1539	Open in IMG/M
3300005329\|Ga0070683_101442593	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	661	Open in IMG/M
3300005329\|Ga0070683_102411464	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Corallococcus → Corallococcus coralloides	504	Open in IMG/M
3300005331\|Ga0070670_101114621	Not Available	720	Open in IMG/M
3300005334\|Ga0068869_100929948	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300005338\|Ga0068868_100647164	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	941	Open in IMG/M
3300005343\|Ga0070687_100366976	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300005345\|Ga0070692_10057500	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2040	Open in IMG/M
3300005356\|Ga0070674_101506284	Not Available	605	Open in IMG/M
3300005364\|Ga0070673_102378295	Not Available	504	Open in IMG/M
3300005365\|Ga0070688_101763126	Not Available	508	Open in IMG/M
3300005367\|Ga0070667_100874115	Not Available	836	Open in IMG/M
3300005367\|Ga0070667_101396654	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	657	Open in IMG/M
3300005434\|Ga0070709_10334017	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1116	Open in IMG/M
3300005435\|Ga0070714_102388687	Not Available	514	Open in IMG/M
3300005437\|Ga0070710_11208668	Not Available	559	Open in IMG/M
3300005456\|Ga0070678_101647316	Not Available	603	Open in IMG/M
3300005466\|Ga0070685_10651187	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	763	Open in IMG/M
3300005518\|Ga0070699_101210717	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300005535\|Ga0070684_100492567	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1135	Open in IMG/M
3300005539\|Ga0068853_101534407	Not Available	645	Open in IMG/M
3300005543\|Ga0070672_100811553	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	823	Open in IMG/M
3300005543\|Ga0070672_102011256	Not Available	520	Open in IMG/M
3300005548\|Ga0070665_101129382	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	795	Open in IMG/M
3300005578\|Ga0068854_102014377	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	532	Open in IMG/M
3300005602\|Ga0070762_11237185	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300005616\|Ga0068852_101848552	Not Available	626	Open in IMG/M
3300005618\|Ga0068864_100596098	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1072	Open in IMG/M
3300005836\|Ga0074470_10905739	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2281	Open in IMG/M
3300005841\|Ga0068863_102159345	Not Available	567	Open in IMG/M
3300005842\|Ga0068858_101245321	Not Available	732	Open in IMG/M
3300006176\|Ga0070765_100951830	Not Available	812	Open in IMG/M
3300006237\|Ga0097621_101044897	Not Available	765	Open in IMG/M
3300006237\|Ga0097621_101623458	Not Available	615	Open in IMG/M
3300006575\|Ga0074053_10978772	Not Available	665	Open in IMG/M
3300006871\|Ga0075434_101347536	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	724	Open in IMG/M
3300006954\|Ga0079219_11670071	Not Available	588	Open in IMG/M
3300007004\|Ga0079218_13903208	Not Available	507	Open in IMG/M
3300009093\|Ga0105240_10448563	All Organisms → cellular organisms → Bacteria	1444	Open in IMG/M
3300009100\|Ga0075418_12853077	Not Available	527	Open in IMG/M
3300009143\|Ga0099792_10714943	Not Available	649	Open in IMG/M
3300009177\|Ga0105248_13358684	Not Available	509	Open in IMG/M
3300009551\|Ga0105238_12835210	Not Available	521	Open in IMG/M
3300010047\|Ga0126382_10881103	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	772	Open in IMG/M
3300010359\|Ga0126376_12054052	Not Available	614	Open in IMG/M
3300010362\|Ga0126377_13497155	Not Available	508	Open in IMG/M
3300010399\|Ga0134127_10974429	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	907	Open in IMG/M
3300010400\|Ga0134122_13091108	Not Available	520	Open in IMG/M
3300011423\|Ga0137436_1189169	Not Available	544	Open in IMG/M
3300011437\|Ga0137429_1187764	Not Available	647	Open in IMG/M
3300011445\|Ga0137427_10113240	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1100	Open in IMG/M
3300012685\|Ga0137397_10254618	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300012930\|Ga0137407_11046511	Not Available	773	Open in IMG/M
3300012944\|Ga0137410_11102461	Not Available	680	Open in IMG/M
3300012944\|Ga0137410_11646412	Not Available	563	Open in IMG/M
3300012960\|Ga0164301_10287836	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1099	Open in IMG/M
3300012961\|Ga0164302_10318701	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300012987\|Ga0164307_11510184	Not Available	568	Open in IMG/M
3300013296\|Ga0157374_10984944	Not Available	862	Open in IMG/M
3300013296\|Ga0157374_12438902	Not Available	550	Open in IMG/M
3300013308\|Ga0157375_13024279	Not Available	561	Open in IMG/M
3300014325\|Ga0163163_11395410	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300014745\|Ga0157377_11652175	Not Available	515	Open in IMG/M
3300014745\|Ga0157377_11750073	Not Available	503	Open in IMG/M
3300014969\|Ga0157376_10552313	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1140	Open in IMG/M
3300014969\|Ga0157376_12437529	Not Available	563	Open in IMG/M
3300015189\|Ga0167667_1025238	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1593	Open in IMG/M
3300015200\|Ga0173480_10870438	Not Available	582	Open in IMG/M
3300015201\|Ga0173478_10842512	Not Available	508	Open in IMG/M
3300015372\|Ga0132256_100481342	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1351	Open in IMG/M
3300015372\|Ga0132256_101511380	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300016445\|Ga0182038_10906499	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Bradymonadales	777	Open in IMG/M
3300018055\|Ga0184616_10242576	Not Available	682	Open in IMG/M
3300018073\|Ga0184624_10389834	Not Available	620	Open in IMG/M
3300018081\|Ga0184625_10466871	Not Available	644	Open in IMG/M
3300018476\|Ga0190274_10923025	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	942	Open in IMG/M
3300018476\|Ga0190274_13760675	Not Available	513	Open in IMG/M
3300019361\|Ga0173482_10518292	Not Available	582	Open in IMG/M
3300019362\|Ga0173479_10619587	Not Available	569	Open in IMG/M
3300021402\|Ga0210385_10642423	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300021403\|Ga0210397_10455815	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300021403\|Ga0210397_10889311	Not Available	689	Open in IMG/M
3300021404\|Ga0210389_11212504	Not Available	580	Open in IMG/M
3300021405\|Ga0210387_11424699	Not Available	595	Open in IMG/M
3300022756\|Ga0222622_10175615	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1403	Open in IMG/M
3300022756\|Ga0222622_11223175	Not Available	553	Open in IMG/M
3300025271\|Ga0207666_1027676	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300025916\|Ga0207663_11191060	Not Available	613	Open in IMG/M
3300025925\|Ga0207650_11157312	Not Available	658	Open in IMG/M
3300025930\|Ga0207701_11094339	Not Available	661	Open in IMG/M
3300025936\|Ga0207670_10423628	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1068	Open in IMG/M
3300025937\|Ga0207669_11600650	Not Available	556	Open in IMG/M
3300025939\|Ga0207665_11631838	Not Available	511	Open in IMG/M
3300025940\|Ga0207691_11757763	Not Available	501	Open in IMG/M
3300025942\|Ga0207689_10862449	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300025944\|Ga0207661_11526292	Not Available	612	Open in IMG/M
3300025949\|Ga0207667_10609603	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1100	Open in IMG/M
3300026075\|Ga0207708_11144314	Not Available	679	Open in IMG/M
3300026078\|Ga0207702_10325389	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1465	Open in IMG/M
3300026088\|Ga0207641_10574294	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1102	Open in IMG/M
3300026088\|Ga0207641_12375694	Not Available	529	Open in IMG/M
3300026088\|Ga0207641_12486555	Not Available	516	Open in IMG/M
3300026089\|Ga0207648_12198401	Not Available	512	Open in IMG/M
3300026121\|Ga0207683_11161310	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300026121\|Ga0207683_11535596	Not Available	615	Open in IMG/M
3300026214\|Ga0209838_1062460	Not Available	557	Open in IMG/M
3300027884\|Ga0209275_10735769	Not Available	568	Open in IMG/M
3300027903\|Ga0209488_10629515	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	775	Open in IMG/M
3300028379\|Ga0268266_12199209	Not Available	524	Open in IMG/M
3300028380\|Ga0268265_12155809	Not Available	564	Open in IMG/M
3300028563\|Ga0265319_1028234	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1980	Open in IMG/M
3300028577\|Ga0265318_10242774	Not Available	657	Open in IMG/M
3300028654\|Ga0265322_10256762	Not Available	502	Open in IMG/M
3300028712\|Ga0307285_10068687	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300030114\|Ga0311333_11115183	Not Available	672	Open in IMG/M
3300031238\|Ga0265332_10060534	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1620	Open in IMG/M
3300031240\|Ga0265320_10474343	Not Available	552	Open in IMG/M
3300031242\|Ga0265329_10029754	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1783	Open in IMG/M
3300031366\|Ga0307506_10049949	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300031366\|Ga0307506_10232241	Not Available	693	Open in IMG/M
3300031474\|Ga0170818_108519494	Not Available	500	Open in IMG/M
3300031507\|Ga0307509_10929287	Not Available	535	Open in IMG/M
3300031546\|Ga0318538_10361964	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300031547\|Ga0310887_10966253	Not Available	542	Open in IMG/M
3300031768\|Ga0318509_10716972	Not Available	555	Open in IMG/M
3300031771\|Ga0318546_10615934	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300031799\|Ga0318565_10511098	Not Available	580	Open in IMG/M
3300031819\|Ga0318568_10718838	Not Available	621	Open in IMG/M
3300031819\|Ga0318568_10878538	Not Available	555	Open in IMG/M
3300031833\|Ga0310917_10917083	Not Available	589	Open in IMG/M
3300031833\|Ga0310917_11104221	Not Available	529	Open in IMG/M
3300031846\|Ga0318512_10357081	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	731	Open in IMG/M
3300031893\|Ga0318536_10566953	Not Available	569	Open in IMG/M
3300031908\|Ga0310900_10045587	All Organisms → cellular organisms → Bacteria → Proteobacteria	2540	Open in IMG/M
3300031954\|Ga0306926_11212185	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300031962\|Ga0307479_11583542	Not Available	611	Open in IMG/M
3300032009\|Ga0318563_10595779	Not Available	596	Open in IMG/M
3300032054\|Ga0318570_10198784	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300033289\|Ga0310914_11564424	Not Available	563	Open in IMG/M
3300034820\|Ga0373959_0121611	Not Available	639	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.14%
Host-Associated	Host-Associated	39.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.85%
Plants	Host-Associated → Plants	39.86%
Aquatic	Environmental → Aquatic	6.29%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.08%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.99%
Sediment	Environmental → Aquatic → Sediment	6.29%
Roots	Host-Associated → Plants → Roots	2.80%
Peat	Environmental → Terrestrial → Peat	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.46%
Soil	Host-Associated → Plants → Rhizosphere → Soil	14.69%
Loam	Environmental → Terrestrial → Soil → Loam	13.99%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.29%
Soil	Host-Associated → Plants → Rhizoplane → Soil	2.10%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.10%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.18%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	14.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.29%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	2.10%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.10%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.40%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.40%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.70%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	4.20%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.50%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.80%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.10%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.10%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.10%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	2.10%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.40%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.40%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.40%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.40%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.70%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.70%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.70%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.70%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.70%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.70%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015189	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb2a, glacial moraine)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026214	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028563	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG	Host-Associated	Open in IMG/M
3300028577	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG	Host-Associated	Open in IMG/M
3300028654	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG	Host-Associated	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031242	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG	Host-Associated	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031507	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM	Host-Associated	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11615J12901_119120471	3300000953	Soil	MTTDVSAALATLQLHPEDGQALKALAALHPGNGAGIEADDLSKALSDARRFHRERGDFDLVVSLIDLELAWTTEASRRADLLHEKGRVLSDELLRDE
C688J35102_1208398761	3300002568	Soil	MTTTVSTALAALQLRPDDAQALQLLKAVHPGNGAGIEADALSKALADARRWHREHADFDLCLELIDLELG
soilH1_103236832	3300003321	Sugarcane Root And Bulk Soil	MTTTVSSALAALQLRPDDVQALQVLKGVHPGNGAGLDAEALSKALSDARRWHRERADFELCLELIDLELGFTTSKQRRADLLHEKGR
Ga0070683_1014425931	3300005329	Corn Rhizosphere	MTTDVSSALETLQLDPDNKQALSALASLHPGNGSGVDRGALAHALTDARRFHRERGDFELCVQLIDLELAWTIEAPKRADLLHEKGRILSDELLRDREGQDNVRQALEA
Ga0070683_1024114641	3300005329	Corn Rhizosphere	MNIDVSNALATLQMDPDNTAALKALASLHPGNGAGVDPETLAKALADARRWHRERGDFELCVQLIDLELPWVTDPARRANLLHEKGRLLADELLSD
Ga0070670_1011146212	3300005331	Switchgrass Rhizosphere	MTTDVSAALATLQLHPEDSQALKALAAIHPGNGAGIDADVLSKALSDARRFHRERGDYELVTS*
Ga0068869_1009299481	3300005334	Miscanthus Rhizosphere	MTTDVTAALATLQLHPEDSQALKALAALHPGNGAGIDAEVLSKALSDARRFHRERGDYELVVSLIDHELAWTTAAPRRADLLHEK
Ga0068868_1006471642	3300005338	Miscanthus Rhizosphere	MTTDVSSALETLQLDPDNKQALSALASLHPGNGSGVDRGALAHALTDARRFHRERGDFELCVQLIDLELAWTIEAPKRADLLHEKGRILSDE
Ga0070687_1003669762	3300005343	Switchgrass Rhizosphere	MTTDVTAALATLQLHPEDSQALKALAALHPGNGAGIDADVLSKALSDARRFHRERGDYDLVVSLIDLELAWTTGAPRRADLLHEK
Ga0070692_100575002	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MTTDVTAALATLQLHPEDSQALKALAALHPGNGAGIDAEVLSKALSDARRFHRERGDY
Ga0070674_1015062841	3300005356	Miscanthus Rhizosphere	PLVMTTDVSTALATLQLHPDDTQALKALASLHPGNGAGVDAAVLSQALSDARRWHRERGDYELCTSLIDLELAWTTPAARRA*
Ga0070673_1023782952	3300005364	Switchgrass Rhizosphere	MTTDVSAALATLQLHPEDSQALKALAAIHPGNGAGIDAEALSKALSDARRFHRERGDYEL
Ga0070688_1017631262	3300005365	Switchgrass Rhizosphere	MTTDVSAALATLQLHPDDSQALKALAAVHPGNGAGIDAEALSKALSDARRFHRERGDYEL
Ga0070667_1008741151	3300005367	Switchgrass Rhizosphere	MTTDVSSALETLQLDPDNKQALSALAALHPGNGSGIDRAALAHALTDARRFHRERGDFELCVQMIDLELAWTIEDGKRA
Ga0070667_1013966541	3300005367	Switchgrass Rhizosphere	MTTDVSAALATLQLHPEDSQALKALAAIHPGNGAGIDAEALSHALSDARRFHRERGDYELVISLIDLELAWTTEAARRADLLHEKGRLLSDELLRDEAAQASVR
Ga0070709_103340171	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTTDVSSALETLQLDPDNKQALSALASLHPGNGSGVDRGALAHALTDARRFHRERGDFELCVQLIDLELAWTIEGPKRADLLHEKGRILSDEL
Ga0070714_1023886871	3300005435	Agricultural Soil	MTTTVSTALAALQLRPDDSQALQVLKGVHPGNGAGLDAEALAKALSDARRWHRERADFELCLELIDLELAFTTLPARRADLL
Ga0070710_112086681	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTTTVSTALAALQLRPDDRQALQELKAVHPGNGAGIDAEALSSALSAARRWHREHADFELCLELID
Ga0070678_1016473161	3300005456	Miscanthus Rhizosphere	MTTDVTAALATLQLHPEDSQALKALAALHPGNGAGIDADVLSKALSDARRFHRERGDYDLVVSLIDLELAWTTGAPRRA
Ga0070685_106511872	3300005466	Switchgrass Rhizosphere	METDISTALATLQIDPDNAQALTALKKLRPSNGSGVDPAALARALTDARRWHRERGDFELCVELIELELPWATDKVRRAELLHEKGRVLADELLSEDEAQ
Ga0070699_1012107171	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	METDISTALATLQIDPDNAQALTALKKLRPSNGSGVDPAALARALTDARRWHRERGDFELCVELIELELPWASDKARRAELLHEKGRVLADELLSEDEAQASLREALENLP
Ga0070684_1004925671	3300005535	Corn Rhizosphere	METDISTALATLQIDPDNAQALTALKKLRPSNGSGVDPAALTRALTDARRWHRERGDFELCVELIELELPWTADKARRADLLHEKGRVLADELLSEDEAQASLREALENLPT
Ga0068853_1015344071	3300005539	Corn Rhizosphere	MTTTVSTALAALQLRPDDTQALQVLKGVHPGNGAGLDAEARSKALSDARRWHRERADFELCLELIDLELAFTTVPARRADLLHEKGRLLFDELLRDEA
Ga0070672_1008115531	3300005543	Miscanthus Rhizosphere	MTTDVSAALATLQLHPEDSQALKALAAIHPGNGAGIDAEALSHALSDARRFHRERGDYELVISLIDLELAWTTEAARRADLLHEKGRL
Ga0070672_1020112561	3300005543	Miscanthus Rhizosphere	MTTDVSTALATLQLHPDDTQALKALAALHPNNGAGIDATALSQALSDARRWHRERGDYDLCTSLIDLELAWTTAPARR
Ga0070665_1011293822	3300005548	Switchgrass Rhizosphere	MTTDVSAALATLQLHPDDSQALKALASLHPGNGAGIDADVLSKALSDARRFHRERGDYELVVSLIDLELA*
Ga0068854_1020143772	3300005578	Corn Rhizosphere	MTTDVTAALATLQLHPEDSQALKALAALHPGNGAGIDAEVLSKALSDARRFHRERGDYELVASLIDLELAWTTDAVRRADLL
Ga0070762_112371852	3300005602	Soil	MSTTVSTALAALQLRPDDAQALQVLKTVHPGNGAGIEADALSKALADARRWHREHADFELCLELIDLELGFTTG
Ga0068852_1018485521	3300005616	Corn Rhizosphere	MTTDVSTALATLQLHPDDTQALKALASLHPGNGAGVDAAVLSQALSDARRWHRERGDYELCTSLIDLELAWTTPAARRAELLHEKGRLLFD
Ga0068864_1005960981	3300005618	Switchgrass Rhizosphere	MTTDVSAALATLQLHPEDGQALKALAALHPGNGAGIEADDLSKALSDARRFHRERGDFDLVVSLIDLELGWTSEASRRADLLHEKGRVLSDELLRDEAGQACV
Ga0074470_109057392	3300005836	Sediment (Intertidal)	MTTDVSAALATLQLHPEDSQALKALAAVPPGNGAGIDADVLSKALSDPRRFHRERGDYELCVSLIDLELAWTTAAARRADLLYEKGKVLFDELLRDEAGQATVREALEAHP
Ga0068863_1021593451	3300005841	Switchgrass Rhizosphere	MTTDVSAALATLQLHPDDSQALKALASLHPGNGAGIDADVLSKALSDARRFHRERGDYELVVSLIDLELAWTTEAARRGDLLHEKGR
Ga0068858_1012453212	3300005842	Switchgrass Rhizosphere	LNDRNYRVYSRLSAPTAKAMTTDVSAALATLQLHPEDGQALKALAALHPGNGAGIEADDLSKALSDARRFHRERGDFDLVVSLIDLELGWTSEASRRADLLHEK
Ga0068860_1028120911	3300005843	Switchgrass Rhizosphere	METDVSTALATLQLDPENAQALTALKGLRPGNGSGVDPGTLARALADARRFHRERGDFELCIQLIDLELAWTTDRTRRAEL
Ga0070765_1009518302	3300006176	Soil	MTTTVSTALAALQLRPDDPQALQALKGVHPGNGAGIDADALSAALSDARRWHREHADFELCLELIDLELGFTTAASRRADLLHEKGRLLSDELLRDEA
Ga0097621_1010448971	3300006237	Miscanthus Rhizosphere	METDISKALATLQIEPDNASALTALKKLRPQNGSGVDPQTLTRALTDARRWHRERGDFELCIQLLDLELLWTTDPVRRADLLHEKGRVL
Ga0097621_1016234581	3300006237	Miscanthus Rhizosphere	MTTDVSAALATLQLHPEDSQALKALAALHPGNGAGIDADVLSKALSDARRFHRERGDYDLVVSLIDLELAWTTTAPRRADLLHEKGR
Ga0074053_109787722	3300006575	Soil	LNDRNYRVYSRLSAPTAKANVQMTTDVSAALATLQLHPEDGQALKALAALHPGNGAGIDADDLSKALSDARRFHRERGDFDLVVSLIDLELAWTTGAPRRADLL
Ga0075434_1013475361	3300006871	Populus Rhizosphere	MTTDVTAALATLQLHPEDSQALKALAAIHPGNGAGIDADVLSQALSDARRFHRERGDFDLVVSLIDLELAWTT
Ga0079219_116700711	3300006954	Agricultural Soil	MTNDVSEALASLQLHPDDTQALAALASLHPGNGAGVDAEVLSKALSDARRWHRERGDFVLCVQLIDLELAWTTGATRRADLLHEKGRILSD
Ga0079218_139032081	3300007004	Agricultural Soil	MTTDVSAALATLELHPDDSQALKVLAGLHPGNGAGIDAEALSKALSDARRFHRERGDYELCTSLIDLELAWTTAAPRRADLLHEKGRLLS
Ga0105240_104485631	3300009093	Corn Rhizosphere	MTTTVSTALAALQLRPDDRQALQELKAVHPGNGAGIDAEALSSALSAARRWHREHADFELCLELIDLELGFTTGDSRRAELLHEKGRLLSDELLRDEAGQ
Ga0075418_128530771	3300009100	Populus Rhizosphere	MTTDVSAALATLQLHPDDSQALKALASLHPGNGAGIDADVLSKALSDARRFHRERGDYELVVSFID
Ga0099792_107149432	3300009143	Vadose Zone Soil	MSTDVSNALATLQLDPDNTQALKALASVHPGNGSGVDRDELSNALSDARRFHRERSDFDLFLQLIDLELAWTLDRTRRADLLHEKGRILSDELLRDQEGQACVLLALEADPQHG
Ga0105248_133586841	3300009177	Switchgrass Rhizosphere	MTTDVSAALATLQLHPDDSQALKALASLHPGNGAGIDADVLSKALSDARRFHRERGDYELVVSLIDLELAWTTEAARRGDLLHEKGRVLSDELLRDEAGQACVREALE
Ga0105238_128352101	3300009551	Corn Rhizosphere	MTTTVSTALAALQLRPDDRQALQELKAVHPGNGAGIDAEALSSALSAARRWHREHADFELCLELIDLELGFTTVPGRRADLLHEKGRLLSDELLRDEAAQAAVRQALE
Ga0126382_108811032	3300010047	Tropical Forest Soil	MTTDVTAALATLQLHPEDSGALKALAALHPGNGAGIDADVLSKALSDARRFHRERGDYELVTSLIDLELAWTTEAPRRADLLH
Ga0126376_120540522	3300010359	Tropical Forest Soil	MTTDVSAALATLQLHPEDGQALKALAALHPGNGAGIEADDLSKALSDARRFHRERGDFDLVVSLIDLELAWTTEASRRADLLHEKGRVLS
Ga0126377_134971551	3300010362	Tropical Forest Soil	MTTDVTAALATLQLHPEDSGALKALAALHPGNGAGIDADALSKALSDARRFHRERGDFELVASLIDLELAWTTEASRRADLLHEKGRVLSDELLRDEAGQTC
Ga0134127_109744291	3300010399	Terrestrial Soil	MTHDVSEVLATLQLHPDDTQALTALKALKPGNGAGIDAEALSKALSDARRFHRERADFELCIQLIDLEL
Ga0134122_130911081	3300010400	Terrestrial Soil	METDVSTALATLQLDPENAQALTALKGLRPGNGSGVDPGTLARALADARRFHRERGDFELCIQLIDLELAWTTDRTRRADLLHEKGRLLADE
Ga0137436_11891691	3300011423	Soil	MTTDVSAALATLQLHPDDSQALKALAAVHPGNGAGIDAEALSMALSDARRFHRERGDYDLVISFIDLELAWTTEASRRADLLHEKGRLLSDELLRDEAGQACVREALAA
Ga0137429_11877642	3300011437	Soil	MTTDVSAALATLQPHPEDSQALKALAAIHPCNGAGIDAEALSKALSDARRFHRERGDYEL
Ga0137427_101132402	3300011445	Soil	MTTDVSAALATLQLHPEDSQALKALAAIHPGNGAGIDAEVLSKALSDARRFHRERGDYELVISLIDLELAWTTEAARRADLMHEKGRLLSD
Ga0137397_102546182	3300012685	Vadose Zone Soil	MNIDVSTTLANLQLDPDNPQALRALSGLEPGNGTGVDPAALAQALGDARRWHRERGDFELCLQLIDLELDWVKEPSRRADLLHEKGRLLSDDLLRGDAGLAAVQEALKAFPEHGPSKESSAQMSLLRGNWQAIS
Ga0137407_110465111	3300012930	Vadose Zone Soil	MTTDVSSALETLQLDPDNKQALSALAALHPGNGSGVDRAALAHALTDARRFHRERGDFELCVQLIDLELAWTIEDSKRADLLHEKGRILSDELLKDAEGQACIRQAL
Ga0137410_111024612	3300012944	Vadose Zone Soil	MTTDVSSALETLQLDPDNKQALSALASLHPGNGSGVDRGALAHALTDARRFHRERGDFELCVQLIDLELAWTIEAPKRADLLHEKGRILSDELLRDGE
Ga0137410_116464121	3300012944	Vadose Zone Soil	MNIDVSTTLANLQLDPDNPQALRALSGLEPGNGTGVDPAALAQALGDARRWHRERGDFELCLQLIDLELDWVKEPSRRADLLHEKGRLLSDDLLRGDAGLAAVQEALKAFPEHGPSKESSAQ
Ga0164301_102878362	3300012960	Soil	MTTDVSAALATLQLHPEDSQALKALAALHPGNGAGIDADVLSKALSDARRFHRERGDYDLVVSLIDLELAWTTLAPRRADLLHEKGRVLSDGL
Ga0164302_103187012	3300012961	Soil	MTTDVSAALATLQLHPEDSQALKALAALHPGNGAGIDADVLSKALSDARRFHRERGDYELCVSLIDLELAWTTDAVRRADLLHDKGRVLSDELLRDEAG
Ga0164307_115101841	3300012987	Soil	MTTDVSAALATLQLHPEDSQALKALAAVHPGNGAGIDADVLSKALSDARRFHRERGDYDLVVSLIDLELAWTTAAPRRADLLY*
Ga0157374_109849441	3300013296	Miscanthus Rhizosphere	MTNDVSEALASLQLHPDDTQALAALASLHPGNGAGVDAEVLSKALSDARRWHRERGDFELCVQLIDLELAWTTGATRRADLLHEKGRILSDELLLDEEGQS
Ga0157374_124389021	3300013296	Miscanthus Rhizosphere	MTTDVTAALATLQLHPEDSGALKALAALHPGNGAGIDADVLSAALSDARRFHRERGDYELVASLIDLELAWTTEAAHRADLMHEKGRVLSDELLRDDAG
Ga0157375_130242791	3300013308	Miscanthus Rhizosphere	MTTDVTAALATLQLHPEDSQALKALAAVHPGNGAGIDADVLSKALSDARRFHRERGDYELCVSLID
Ga0163163_113954101	3300014325	Switchgrass Rhizosphere	MTTDVSAALATLQLHPDDSQALKALAALHPGNGAGIDADVLSKALSDARRFHRERGDYELVASLIDLELAWTTEAARRADLMHEKGRV
Ga0157377_116521751	3300014745	Miscanthus Rhizosphere	MTTDVSAALATLQLHPEDSQALKALAAIHPGNGAGIDAEALSHALSDARRFHRERGDYELVISLIDLELAWTTEAARRADLLHEKGRLLSD
Ga0157377_117500731	3300014745	Miscanthus Rhizosphere	MTTDVSTALATLQLHPDDTQALKALASLHPGNGAGVDAAVLSQALSDARRWHRERGDYELCTSLIDLE
Ga0157376_105523132	3300014969	Miscanthus Rhizosphere	MTTDVSAALATLQLHPEDSQALKALAAVHPGNGAGIDADVLSKALSDARRFHRERGDYELCVSLIDLELAWTTE
Ga0157376_124375291	3300014969	Miscanthus Rhizosphere	MTTDVSSALETLQLDPDNKQALSALASLHPGNGSGVDRGALAHALTDARRFHRERGDFELCVQLIDLELAWTIEAPKRADLLHEKGRILSDELLRDREG
Ga0167667_10252381	3300015189	Glacier Forefield Soil	METDISTALATLQIDPNNASALSALKGLKPGNGAGVDPEALARALADARRWHRERGDFELCVQLIDLELPWTADKARRADLQHEKGRI
Ga0173480_108704381	3300015200	Soil	MTTDVSAALATLQLHPEDGQALKALAALHPGNGAGIEANDLSMALSDARRFHRERGDFDLVVSLIDLELAWTTEASRRADLLHEKGRVLSDELLRDEAGQKCVREAL
Ga0173478_108425122	3300015201	Soil	MTTDVTAALATLQLHPEDSQALKALAALHPGNGAGIDAEVLSKALSDARRFHRERGDYELVVSLIDHELAWTTAAPR
Ga0132256_1004813422	3300015372	Arabidopsis Rhizosphere	MTTDVSAALATLQLHPDDSQALKALAALHPGNGAGIDAEALSKALSDARRFHRERGDFDLVVSLIDLELAWTTQAPRRADLLH
Ga0132256_1015113802	3300015372	Arabidopsis Rhizosphere	MTTDVSAALATLQLHPEDGQALKALAALHPGNGAGIEANDLSKALSDARRFHRERGDFDLVVSLIDL
Ga0182038_109064992	3300016445	Soil	MTTTVSTALAALQLRPDDRQALQELKAVHPGNGAGIDAEGLSSALSAARRWHREHGDFELCLELIDLELGFTTAAGRRADLLHEKGRLLFDELLRDEAG
Ga0184616_102425762	3300018055	Groundwater Sediment	MTTDVSAALATLQLHPEDSQALKALAAIHPGNGAGIDADALSKVLSDARRFHRERGDYELVTSLIDL
Ga0184624_103898341	3300018073	Groundwater Sediment	MTTDVSAALATLELHPDDSQALKVLAGVHPGNGAGIDAEALSKALSDARRFHRERGD
Ga0184625_104668712	3300018081	Groundwater Sediment	MTTDVSAALATLELHPDDSQALKVLAGVHPGNGAGIDAEALSKALSDARRFHRERGDYELCISLIDLELAWTTEAARRADLLHEK
Ga0190274_109230251	3300018476	Soil	MTTDVSTALATLQLHPDDTQALKALAALHPNNGAGIDATALSQALSDARRWHRERGDYDLCTSLIDLELAWTTAPARRADLL
Ga0190274_137606751	3300018476	Soil	MTTDVSAALATLELHPDDSQALKVLAGVHPGNGAGIEPEALSKALSDARRFHRERGDYELCISLIDLELAWTTAAARRADLLHEKGRLLSDELLRDEAGQAAVREALEV
Ga0173482_105182922	3300019361	Soil	MTTDVSTALATLQLHPDDTQALKALAALHPNNGAGIDATALSQALSDARRWHRERGDYEL
Ga0173479_106195872	3300019362	Soil	MTTDVTAALATLQLHPEDSQALKALAALHPGNGAGIDAEVLSKALSDARRFHRERGDYE
Ga0210385_106424231	3300021402	Soil	MTTTVSAALTSLQLRPDDPQALQALQAIRPGNGAGIEAEALSQALSDARRWHRERSDFELCLQLIDLELNWTSAPDRRADLLHEKARLLSDELLRDGAA
Ga0210397_104558152	3300021403	Soil	MNIDVSTALATLQLDPDNPQALKALADLQPTADFDAAAVQQALGDARRWHRERGDFELVLQLIEVELTWTKDAARRADLLHEKGRLLSDDLLRGEAGLAAVQQALEALPSHGPSKESAAQMSLM
Ga0210397_108893111	3300021403	Soil	MTTDVSTALATLQLDPDNSQALKALAAVHPGNGSGIDREDLSKELSDARRFHRERSDFDLCVQLIDLELGWTQDR
Ga0210389_112125041	3300021404	Soil	MNIDVSTALATLQLDPDNPQALKALADLQPTADFDAAAVQQALGDARRWHRERGD
Ga0210387_114246992	3300021405	Soil	MNIDVSTALATLQLDPDNLQALKALAGVKPGNGTTVDLGALESALGDARRWHRERGDFELVLQLIDLELGWIGDAARRADLLHEKGRLLSDELLRGEEGLSAVQA
Ga0222622_101756152	3300022756	Groundwater Sediment	MTTDVSAALATLELHPDDSQALKVLAGLHPGNGAGIDADALSKTLSDARRFHRERGDYELCISLIDLELAWTTTAQRRADLLHEKGRLLSDELLRDDAAQAAVREALEVSPGH
Ga0222622_112231751	3300022756	Groundwater Sediment	LPFTQIPMETDISTALATLQIDPDNASALSALKGLKPGNGAGIDPPALARALADARRWHRERGDFELCVQLIELELPWTTDKTRRAELLHEK
Ga0207666_10276761	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	MTTDVTAALATLQLHPEDSQALKALAALHPGNGAGIDAEVLSKALSDARRFHRERGDYELVVSLIDHELAWTTAA
Ga0207663_111910601	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MTTTVSTALAALQLRPDDRQALQELKAVHPGNGAGIDAEALSSALSAARRWHREHADFELCLELIDLELEFTTAAGR
Ga0207650_111573121	3300025925	Switchgrass Rhizosphere	MTTDVSAALATLELHPDDSQALKVLAGVHPGNGAGIDADALSKTLSDARRFHRERGDYELCISLIDLELAWTTTAPRRADLLHEKG
Ga0207701_110943392	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MTHDVSEALATLQLHPEDTQALKALAALHPGNGAGVDPEVLSKALTDARRFHRERSDFELVVQLIDLELAWTTSAGRRADLLHEKGRVLSDELL
Ga0207670_104236282	3300025936	Switchgrass Rhizosphere	MTTDVSAALATLQLHPDDSQALKALASLHPGNGAGIDADVLSKALSDARRFHRERGDYELVVSLIDLELAWTTEAARRGDLLHEKGRVLSDELL
Ga0207669_116006502	3300025937	Miscanthus Rhizosphere	VALPRVRRPPAKAMTTDVSAALATLQLHPDDSQALKALAALHPGNGAGIDAEVLSKALSDARRFHRERGDYELVVSLIDLELAWTTEAA
Ga0207665_116318382	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MTTDVSAALATLQLHPEDSGALKALAALHPGNGAGIDADELSTALSDARRFHRERGDFELVVSLIDLELA
Ga0207691_117577632	3300025940	Miscanthus Rhizosphere	MTTDVSTALATLQLHPDDTQALKALAALHPNNGAGIDATALSQALSDARRWHRERGDYDLCTSLIDLE
Ga0207689_108624491	3300025942	Miscanthus Rhizosphere	MTTDVTAALATLQLHPEDSQALKALAALHPGNGAGIDAEVLSKALSDARRFHRERGDYELVVSLIDHELAWTTAAPRRADLLHEKGR
Ga0207661_115262922	3300025944	Corn Rhizosphere	METDISTALATLQIDPDNTHALGALRRIRPANGSGVDPDALGRALTDARRWHRERGDFELCVQLIDLELPWVTEPARRANLLHEKGRLLAD
Ga0207667_106096032	3300025949	Corn Rhizosphere	MTTTVSSALAALQLRPDDVQALQVLKGVHPGNGAGLDAEALSKALSDARRWHRERADFELCLELIDLELGFTT
Ga0207708_111443142	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MTTDVSAALATLQLHPEDSQALKALAAIHPGNGAGIDAEALSHALSDARRFHRERGDYELVTSLIDLELAWTTE
Ga0207702_103253892	3300026078	Corn Rhizosphere	MTTTVSTALAALQLRPDDVQALQALKGVHPGNGAGLDADALSKALSDARRWHRERADFGLCLDLIDLELGFTTSKERRADLLHEKGRLLF
Ga0207641_105742941	3300026088	Switchgrass Rhizosphere	MTTTVSTALAALQLRPDDAQALQLLKAVHPGNGAGIEADALSKALADARRWHREHADFDLCLELIDLELGFTTGDSRRAE
Ga0207641_123756942	3300026088	Switchgrass Rhizosphere	MTTDVSAALATLQLHPEDSQALKALAALHPGNGAGIDADVLSKALSDARRFHRERGDYDLVVSLIDLELAWTTTAPRRADLLHEKGRVL
Ga0207641_124865551	3300026088	Switchgrass Rhizosphere	MTTDVSAALATLQLHPDDSQALKALASLHPGNGAGIDADVLSKALSDARRFHRERGDYELVVSLIDLELAWTTEAARRGDLLHEKGRVLSDELLRDEAEQAYVRETLETS
Ga0207648_121984011	3300026089	Miscanthus Rhizosphere	MTTDVSAALATLQLHPEDSQALKALAAIHPGNGAGIDAEALSKALSDARRFHRERGDYE
Ga0207683_111613101	3300026121	Miscanthus Rhizosphere	MTTDVSTALATLQLHPDDTQALKALAALHPNNGAGIDASALSQALSDARRWHRERGDYDLCISLIDLELAWTTAPARRADLL
Ga0207683_115355961	3300026121	Miscanthus Rhizosphere	MTTDVSAALATLQLHPEDSQALKALAALHPGNGAGIDADVLSKALSDARRFHRERGDYDLVVSLIDLELA
Ga0209838_10624601	3300026214	Soil	MTTTVSAALATLQLRPNDRQALEALQGIKPGNGAGIEAEALSTALSDARRWHRERADFELCLQLIDLELGWTTSPGRRADLLYEKG
Ga0209275_107357691	3300027884	Soil	MSTTVSTALAALQLRPDDAQALQVLKTVHPGNGAGIEADALSKALADARRWHREHADFDLCLELIDLELGFTTGDARRADLLHEKGR
Ga0209488_106295151	3300027903	Vadose Zone Soil	MSTDVSNALATLQLDPDNTQALKALASVHPGNGSGVDRDELSNALSDARRFHRERSDFDL
Ga0268266_121992092	3300028379	Switchgrass Rhizosphere	MTTDVSAALATLQLHPEDSQALKALAAIHPGNGAGIDAEALSHALSDARRFHRERGDYELVISLIDLELAWTTEAARRADLLHEKGRLLS
Ga0268265_121558092	3300028380	Switchgrass Rhizosphere	MTTDVTAALATLQLHPEDSQALKALAALHPGNGAGIDADVLSKALSDARRFHRERGDYDLVVSLID
Ga0265319_10282342	3300028563	Rhizosphere	MTTTVSTALANLQLRPDDPQALQTLQGIKPGNGAGIEAEALSTALSDARRWHRERSDFELCLQLIDLELGWTTSPG
Ga0265318_102427741	3300028577	Rhizosphere	METDISTALATLQIDPDNTHALGALKRIRPANGSGVDPEALARALADARRWHRERGDFELCVQLIDLELPWATEPARRANLLHE
Ga0265322_102567621	3300028654	Rhizosphere	METDISTALTALQIDPDNAHALTALKRLRPANGGGVDSVALGRALADARRWHRERGDFELCVQLIDLELPWATDPARRAELLHEKGRVLADELLSEEAAQA
Ga0307285_100686872	3300028712	Soil	MTTDVSAALATLQLHPDDSQALKALAALHPGNGAGIDADALSKALSDARRFHRERGDYELVISLIDLELAWTTESSRRADLLHEKGRLLSDELLRDEAGQACVREALAASP
Ga0311333_111151832	3300030114	Fen	MSTTVSTALAALQLRPDDAQALQTLKAVHPGNGAGIDADALSKALADARRWHREHADFDLCLELIDLELGFTTGDARRADLLHEKGRLLSDELLRDE
Ga0265332_100605342	3300031238	Rhizosphere	MTTDVSSALETLQLDPDNKQALSALASLHPGNGSGVDRGALAHALTDARRFHRERGDFELCVQLIDLELAWTIEAPKRADLLHE
Ga0265320_104743431	3300031240	Rhizosphere	MTTDVSSALETLQLDPDNKQALNALAALHPGNGSGVDRGALAHALTDARRFHRERGDIELCVQLIDLELAWTVEAPKRADLLHEKGRILSDELLRDSEGQECVRLALEA
Ga0265329_100297541	3300031242	Rhizosphere	METDISTALTALQIDPDNAHALTALKRLRPANGGGVDSVALGRALADARRWHRERGDFELCVQLIDLELPWATDPARRAELLHEKGRVLADELLSEEAAQASL
Ga0307506_100499492	3300031366	Soil	MTTDVSAALATLQLHPEDSQALKALAAVHPGNGAGIDADVLSKALSDARRFHRERGDYEL
Ga0307506_102322412	3300031366	Soil	MTTDVSAALATLQLHPDDSQALKALASLHPGNGAGIDAGALSQALSDARRFHRERGDYELIISMIDLELAWTTEASRRADLLHEKG
Ga0170818_1085194941	3300031474	Forest Soil	MTTDVSSALETLQLDPDNKQALSALASLHPGNGSGVDRGALAHALTDARRFHRERGDFELCVQLIDLELAWTIEAPKRADLLHEKG
Ga0307509_109292871	3300031507	Ectomycorrhiza	MTTDVSTALATLQLDPDNTQALKALADVHPGNGSGVDREALSQALSDARRWHRERGDFDLCVQLIDQELAWTMERTRRADLMHEKGRILSDELLRDQEGQQCIS
Ga0318538_103619642	3300031546	Soil	MSTDVQEALATLQLHPDDTQALRALQALHPGNGAGVDPEVLSKALSDARRWHRERGDFELCISLIDLELAWTKEAE
Ga0310887_109662531	3300031547	Soil	MTTDVSAALATLQLHPEDSQALKALAAIHPGNGAGIDAEVLSKALSDARRFHRERGDYEL
Ga0318509_107169722	3300031768	Soil	MTTDVSTALATLQLDPDNSQALAALAALHPGNGAGVDTQALSKALGDARRFHRERGDFELCVQLIDQELAWTADPARRADLLHEKGRILS
Ga0318546_106159341	3300031771	Soil	MSTDVQEALATLQLHPDDTQALRALQALHPGNGAGVDPEVLSKALSDARRWHRERGDFELCISLIDLELAWTKEAERRGDLLH
Ga0318565_105110982	3300031799	Soil	MTTDVSTALATLQLDPDNSQALAALAALHPGNGAGVDTQALSKALGDARRFHRERGDFELCVQLIDQELAWTADPARRADLLHEKGRILSDELLRDDAG
Ga0318568_107188381	3300031819	Soil	MSTDVQEALATLQLHPDDTQALRALQALHPGNGAGVDPEVLSKALSDARRWHRERGDFELCISLIDLELAWTKEAERRGDLLHEKGRLLSDELLRDEAGQAT
Ga0318568_108785381	3300031819	Soil	MTTTVSTALAALQLRPDDRQALQELKAVHPGNGAGIDAEALSSALSAARRWHREHADFELCLELIDLELGFTTAAGRRADLLHEKGRLLFDELLRDEAGQ
Ga0310917_109170831	3300031833	Soil	MSTDVSTALANLQLHPDDTQALKALAALHPGNGAGIDAEVLSKALSDARRWHRERGDFEL
Ga0310917_111042212	3300031833	Soil	MSTDVQEALATLQLHPDDTQALRALQALHPGNGAGVDPEVLSKALSDARRWHRERGDFELCISLIDLELAWTKEAERRGDLLHEKGRLLSDELLRD
Ga0318512_103570811	3300031846	Soil	MSTDVSTALANLQLHPDDTQALKALAALHPGNGAGIDAEVLSKALSDARRWHRERGDFELCIQLIDLE
Ga0318536_105669532	3300031893	Soil	MSTDVSTALANLQLHPDDTQALKALAALHPGNGAGIDAEVLSKALSDARRWHRERGDFELCIQL
Ga0310900_100455871	3300031908	Soil	MTTDVSAALATLQLHPDDSQALKALAALHPGNGAGIDADVLSKALSDARRFHRERGDYELVVSLIDLELAWTTEAARRADLLHEKGRVLSDELLRDEAGQACVREALEALPG
Ga0306926_112121851	3300031954	Soil	MNIDVSSALATLQLDPDNPQALKALSGLKPGNGAGVDPEALERALADARRWHRERGDFELTLQLIDLELAWTTDAARRADLLHEKGRLLSDELLRGEDGLAAVQDALKTH
Ga0307479_115835422	3300031962	Hardwood Forest Soil	MSTDVASALATLQLDPDNTQALKALAAVHPGNGSGVDRLALSQALSDARRFHRERSDFELCVQLIDLELEWTSDRARRADLLHEKGRILSDEL
Ga0318563_105957791	3300032009	Soil	MSTDVSTALANLQLHPDDTQALKALAALHPGNGAGIDAEVLSKALSDARRWHRERGDFELCIQLIDLELAWTTD
Ga0318570_101987842	3300032054	Soil	MSTDVQEALATLQLHPDDTQALRALQALHPGNGAGVDPEVLSKALSDARRWHRERGDFELCISLIDLELAWTKEAERRGDLLHEKGR
Ga0310914_115644241	3300033289	Soil	MTTTVSTALAALQLRPDDRQALQELKAVHPGNGAGIDAEGLSSALSAARRWHREHGDFELCLELIDLELGFTTAAGRRADLLHEKGRLLSDELLRDEA
Ga0373959_0121611_461_637	3300034820	Rhizosphere Soil	MTTDVTAALATLQLHPEDSGALKALAALHPGNGAGIDADVLSAALSDARRFHRERGDYE

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052059

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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