Metagenome / Metatranscriptome Family F052033

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F052033
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	55 residues
Representative Sequence	MTQQCPPHTWSATPLKDERGKAIFECSKCGTYITVDCKYLTKAEVQKCAATPEAAA
Number of Associated Samples	102
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.41 %
% of genes near scaffold ends (potentially truncated)	21.68 %
% of genes from short scaffolds (< 2000 bps)	90.91 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (68.531 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (30.070 % of family members)
Environment Ontology (ENVO)	Unclassified (32.168 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.350 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.29% β-sheet: 20.24% Coil/Unstructured: 65.48%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF00011	HSP20	63.64
PF00226	DnaJ	5.59
PF01381	HTH_3	1.40
PF00582	Usp	0.70
PF13379	NMT1_2	0.70
PF13518	HTH_28	0.70
PF08388	GIIM	0.70
PF01527	HTH_Tnp_1	0.70
PF01526	DDE_Tnp_Tn3	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	63.64
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.53 %
Unclassified	root	N/A	31.47 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.53 %
Unclassified	root	N/A	31.47 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.53 %
Unclassified	root	N/A	31.47 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.47 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	13.99 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.29 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.47 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	10.49 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	3.50 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.80 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.47 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	10.49 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.40 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.47 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	10.49 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	1.40 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.40 %
Cyanophyceae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	0.70 %
Shewanellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae	0.70 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.47 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	10.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.40 %
Chlorogloeopsidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Chlorogloeopsidaceae	0.70 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.70 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.70 %
Cyanophyceae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	0.70 %
Shewanellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.47 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	10.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.40 %
Chlorogloeopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Chlorogloeopsidaceae → Chlorogloeopsis	0.70 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.70 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.70 %
Cyanophyceae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	0.70 %
Shewanellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.47 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	10.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.40 %
Chlorogloeopsis fritschii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Chlorogloeopsidaceae → Chlorogloeopsis → Chlorogloeopsis fritschii	0.70 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.70 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.70 %
Cyanophyceae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	0.70 %
Shewanellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae	0.70 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c1057197	Not Available	748	Open in IMG/M
2228664022\|INPgaii200_c1058595	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300000559\|F14TC_101456548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	655	Open in IMG/M
3300001431\|F14TB_100309297	Not Available	848	Open in IMG/M
3300001431\|F14TB_102578694	Not Available	555	Open in IMG/M
3300003324\|soilH2_10207112	All Organisms → cellular organisms → Bacteria → Proteobacteria	2267	Open in IMG/M
3300003373\|JGI25407J50210_10081846	Not Available	802	Open in IMG/M
3300004016\|Ga0058689_10159235	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300004479\|Ga0062595_101511223	Not Available	620	Open in IMG/M
3300005178\|Ga0066688_10408157	Not Available	881	Open in IMG/M
3300005178\|Ga0066688_10528165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	759	Open in IMG/M
3300005179\|Ga0066684_10767286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	640	Open in IMG/M
3300005187\|Ga0066675_10239766	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300005294\|Ga0065705_10212725	All Organisms → cellular organisms → Bacteria	1361	Open in IMG/M
3300005334\|Ga0068869_101730557	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300005440\|Ga0070705_101163930	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300005459\|Ga0068867_101104119	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300005544\|Ga0070686_100933746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae	708	Open in IMG/M
3300005546\|Ga0070696_100486258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	980	Open in IMG/M
3300005562\|Ga0058697_10315678	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300005575\|Ga0066702_10438423	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300005937\|Ga0081455_10107410	All Organisms → cellular organisms → Bacteria	2225	Open in IMG/M
3300005981\|Ga0081538_10099707	Not Available	1467	Open in IMG/M
3300005981\|Ga0081538_10389020	Not Available	502	Open in IMG/M
3300005985\|Ga0081539_10015389	All Organisms → cellular organisms → Bacteria → Proteobacteria	5562	Open in IMG/M
3300005985\|Ga0081539_10017748	All Organisms → cellular organisms → Bacteria → Proteobacteria	4977	Open in IMG/M
3300005985\|Ga0081539_10446406	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300006049\|Ga0075417_10017449	All Organisms → cellular organisms → Bacteria	2809	Open in IMG/M
3300006049\|Ga0075417_10102606	All Organisms → cellular organisms → Bacteria	1299	Open in IMG/M
3300006049\|Ga0075417_10446424	Not Available	644	Open in IMG/M
3300006049\|Ga0075417_10456985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	637	Open in IMG/M
3300006194\|Ga0075427_10011704	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300006844\|Ga0075428_100732545	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300006844\|Ga0075428_101338370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	752	Open in IMG/M
3300006845\|Ga0075421_100038190	All Organisms → cellular organisms → Bacteria → Proteobacteria	6087	Open in IMG/M
3300006845\|Ga0075421_100232047	All Organisms → cellular organisms → Bacteria	2269	Open in IMG/M
3300006845\|Ga0075421_100447593	All Organisms → cellular organisms → Bacteria	1544	Open in IMG/M
3300006846\|Ga0075430_100119210	All Organisms → cellular organisms → Bacteria	2200	Open in IMG/M
3300006852\|Ga0075433_10694241	Not Available	892	Open in IMG/M
3300006852\|Ga0075433_11271830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	638	Open in IMG/M
3300006853\|Ga0075420_100099863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2561	Open in IMG/M
3300006853\|Ga0075420_100376335	Not Available	1229	Open in IMG/M
3300006854\|Ga0075425_103037747	Not Available	512	Open in IMG/M
3300006871\|Ga0075434_100237974	All Organisms → cellular organisms → Bacteria	1840	Open in IMG/M
3300006880\|Ga0075429_100601183	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300006880\|Ga0075429_101045727	Not Available	713	Open in IMG/M
3300006880\|Ga0075429_101964789	Not Available	507	Open in IMG/M
3300006904\|Ga0075424_100162790	All Organisms → cellular organisms → Bacteria	2365	Open in IMG/M
3300006904\|Ga0075424_102605636	Not Available	529	Open in IMG/M
3300006969\|Ga0075419_10128623	All Organisms → cellular organisms → Bacteria	1645	Open in IMG/M
3300007076\|Ga0075435_101307971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	635	Open in IMG/M
3300007790\|Ga0105679_10112355	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300007790\|Ga0105679_10503971	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300009012\|Ga0066710_103622943	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300009094\|Ga0111539_10468449	All Organisms → cellular organisms → Bacteria	1467	Open in IMG/M
3300009100\|Ga0075418_10839838	Not Available	992	Open in IMG/M
3300009100\|Ga0075418_11490388	Not Available	734	Open in IMG/M
3300009100\|Ga0075418_11739484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	678	Open in IMG/M
3300009100\|Ga0075418_12643692	Not Available	548	Open in IMG/M
3300009147\|Ga0114129_11387341	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300009147\|Ga0114129_11543934	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300009162\|Ga0075423_10651877	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300009162\|Ga0075423_11179386	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300009162\|Ga0075423_11562891	Not Available	708	Open in IMG/M
3300009162\|Ga0075423_12626915	Not Available	551	Open in IMG/M
3300009162\|Ga0075423_12885253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	527	Open in IMG/M
3300009553\|Ga0105249_12340375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	607	Open in IMG/M
3300010038\|Ga0126315_10322464	Not Available	957	Open in IMG/M
3300010041\|Ga0126312_10502367	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	868	Open in IMG/M
3300010064\|Ga0127433_119831	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300010068\|Ga0127442_115411	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M
3300010071\|Ga0127477_161771	Not Available	888	Open in IMG/M
3300010073\|Ga0127429_120116	Not Available	517	Open in IMG/M
3300010074\|Ga0127439_158141	Not Available	547	Open in IMG/M
3300010077\|Ga0127437_106587	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300010082\|Ga0127469_156006	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300010088\|Ga0127476_1042483	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300010090\|Ga0127471_1070654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	617	Open in IMG/M
3300010095\|Ga0127475_1000099	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300010095\|Ga0127475_1005531	All Organisms → cellular organisms → Bacteria	2511	Open in IMG/M
3300010099\|Ga0127450_1086397	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300010100\|Ga0127440_1075630	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300010105\|Ga0127470_1120640	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300010106\|Ga0127472_1022814	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300010108\|Ga0127474_1131681	All Organisms → cellular organisms → Bacteria	1724	Open in IMG/M
3300010113\|Ga0127444_1056096	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300010118\|Ga0127465_1011770	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300010139\|Ga0127464_1119411	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300010139\|Ga0127464_1146746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	554	Open in IMG/M
3300010142\|Ga0127483_1260236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	531	Open in IMG/M
3300010145\|Ga0126321_1292783	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300010145\|Ga0126321_1492340	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300010399\|Ga0134127_12117052	Not Available	641	Open in IMG/M
3300010403\|Ga0134123_12009293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	637	Open in IMG/M
3300012201\|Ga0137365_10343570	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300012212\|Ga0150985_103635678	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300012356\|Ga0137371_11287053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	542	Open in IMG/M
3300012372\|Ga0134037_1042320	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300012378\|Ga0134025_1238196	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300012384\|Ga0134036_1265381	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300012389\|Ga0134040_1195450	Not Available	692	Open in IMG/M
3300012389\|Ga0134040_1260162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Chlorogloeopsidaceae → Chlorogloeopsis → Chlorogloeopsis fritschii	1225	Open in IMG/M
3300012389\|Ga0134040_1282496	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300012395\|Ga0134044_1181610	Not Available	559	Open in IMG/M
3300012398\|Ga0134051_1047691	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300012404\|Ga0134024_1042667	Not Available	668	Open in IMG/M
3300012404\|Ga0134024_1425785	All Organisms → cellular organisms → Bacteria	1599	Open in IMG/M
3300012405\|Ga0134041_1242193	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300012407\|Ga0134050_1117823	Not Available	632	Open in IMG/M
3300012469\|Ga0150984_103319731	Not Available	858	Open in IMG/M
3300012469\|Ga0150984_112067643	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300013308\|Ga0157375_10629808	All Organisms → cellular organisms → Bacteria → Proteobacteria	1230	Open in IMG/M
3300014968\|Ga0157379_12111428	Not Available	558	Open in IMG/M
3300017792\|Ga0163161_10413075	Not Available	1084	Open in IMG/M
3300018422\|Ga0190265_12859648	Not Available	577	Open in IMG/M
3300018466\|Ga0190268_10180843	Not Available	1123	Open in IMG/M
3300018466\|Ga0190268_10589649	Not Available	784	Open in IMG/M
3300018466\|Ga0190268_11186993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300018468\|Ga0066662_11868011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	628	Open in IMG/M
3300019487\|Ga0187893_10839307	Not Available	554	Open in IMG/M
3300020070\|Ga0206356_10021190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	559	Open in IMG/M
3300022563\|Ga0212128_10093705	Not Available	1939	Open in IMG/M
3300025918\|Ga0207662_10050905	All Organisms → cellular organisms → Bacteria	2463	Open in IMG/M
3300027750\|Ga0209461_10037316	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300027873\|Ga0209814_10092511	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300027873\|Ga0209814_10125461	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300027873\|Ga0209814_10539592	Not Available	518	Open in IMG/M
3300027880\|Ga0209481_10261256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	873	Open in IMG/M
3300027880\|Ga0209481_10752290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	507	Open in IMG/M
3300027909\|Ga0209382_10002527	All Organisms → cellular organisms → Bacteria	26430	Open in IMG/M
3300027909\|Ga0209382_10935163	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300028380\|Ga0268265_11231919	Not Available	747	Open in IMG/M
3300030830\|Ga0308205_1008254	Not Available	1013	Open in IMG/M
3300030830\|Ga0308205_1012827	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300030903\|Ga0308206_1021985	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300030903\|Ga0308206_1031512	Not Available	966	Open in IMG/M
3300031092\|Ga0308204_10059138	Not Available	957	Open in IMG/M
3300031093\|Ga0308197_10347729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	563	Open in IMG/M
3300031740\|Ga0307468_102489630	Not Available	507	Open in IMG/M
3300031852\|Ga0307410_10646227	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300031995\|Ga0307409_102869715	Not Available	509	Open in IMG/M
3300032002\|Ga0307416_100643873	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300032126\|Ga0307415_101411412	Not Available	663	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	53.15%
Host-Associated	Host-Associated	46.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.05%
Plants	Host-Associated → Plants	46.85%
Aquatic	Environmental → Aquatic	2.10%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	36.36%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.29%
Roots	Host-Associated → Plants → Roots	2.10%
Freshwater	Environmental → Aquatic → Freshwater	1.40%
Phyllosphere	Host-Associated → Plants → Phyllosphere	1.40%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.70%
Cave	Environmental → Terrestrial → Cave	0.70%
Phylloplane	Host-Associated → Plants → Phylloplane	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	34.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.59%
Loam	Environmental → Terrestrial → Soil → Loam	4.90%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.10%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.40%
Sand	Environmental → Terrestrial → Soil → Sand	1.40%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.40%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	1.40%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.70%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	34.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.80%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.10%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	2.10%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.40%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.40%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.40%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	1.40%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.70%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	30.07%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	23.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.90%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.80%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.10%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	2.10%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.40%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.40%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.40%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.40%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.40%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.40%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.40%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.40%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.40%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	1.40%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.70%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.70%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.70%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.70%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.70%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.70%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.70%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010064	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010068	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010071	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010073	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010074	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010077	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010082	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010088	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010090	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010095	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010099	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010100	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010105	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010106	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010108	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010113	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010118	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010139	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010142	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012372	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012378	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012384	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012389	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012395	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012398	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012404	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012405	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012407	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_10571972	2228664022	Soil	MTQQCPPHTWSATPLKDERGKAIFXCSKCGTSITVDCKYLTKAEVQKCAATPEAAA
INPgaii200_10585951	2228664022	Soil	MTQQCPPHTWSATPLKDERGKAIWECSKCGTYITGDCKYLTKAEVQKVSATQDVAA
F14TC_1014565482	3300000559	Soil	MTQQCPPHAWSATPLKDERDKAIFECSKCGTYITVDCKYLTKAEVQKCAATPAAAD*
F14TB_1003092972	3300001431	Soil	TMTQQCPPHTWSETPLKDERGMAIFECSKCGTYITVDCKYLTKAEVQKLSATPKAAA*
F14TB_1025786941	3300001431	Soil	MTPTCPPHTWSATPLKDERGKSIFKCATCGTYITGDCRYLTEAEVQQYAAAPEAVA*
soilH2_102071125	3300003324	Sugarcane Root And Bulk Soil	MTQQCPPHTWSATPLKDERGKAIFECSKCGTYITVDCKYLTKAEVTKCAATQEAAA*
JGI25407J50210_100818462	3300003373	Tabebuia Heterophylla Rhizosphere	MTPTCPPHTWSATPLKDERGKSIFECATCGTYITGDCRYLTKGEVQQYAATPEAVA*
Ga0058689_101592352	3300004016	Agave	MTQQCPPHTWSETPLKDDRGKAIFACSKCGTYITVDCKYLTKAAVEKFAAPPKAA
Ga0062595_1015112231	3300004479	Soil	MTQQCPPHTWSATPLKDERGKAIFACSKCGTYITVDCKYLTKADVQKCAATQEAAD*
Ga0066688_104081571	3300005178	Soil	CPPHTWSATPLKDERGKAILECSKCGTYITVDCKYLTKAEVTKCAATQEAAA*
Ga0066688_105281651	3300005178	Soil	MTQQCPPHTWSATPLKDERGKAIWECSKCGTYITGDCKYLTTAEVQKCAATPAAAD*
Ga0066684_107672861	3300005179	Soil	MTQQCPPHTWSATALKDERGKAIFECSKCGTYITVDCKYLTKADVQKCAATQDAAA*
Ga0066675_102397663	3300005187	Soil	MTQQCPPHTWSETPLKDERGKAIFECSKCGTYITVDCKYLTKAEVQKCAATPEAAA*
Ga0065705_102127251	3300005294	Switchgrass Rhizosphere	MTQQCPPHTWSATPLKDERGKAIWECSKCGTYITGDCKYLIKAEVQKVSATQDVAA*
Ga0068869_1017305572	3300005334	Miscanthus Rhizosphere	MTQQCPPHTWSATPLKDERGKAIFACSKCGTYITVDCKYLTKAEVTKCAATQEAAD*
Ga0070705_1011639301	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MQQCPPHTWSATPLKDERGKAIFECSKCGTYITVDCKYLTKADVQKCAATQEAAD*
Ga0068867_1011041192	3300005459	Miscanthus Rhizosphere	MMQQCPPHTWSATPLKDERGKAIFACSKCGTYITVDCKYLTKADVQKCAATQEAAD*
Ga0070686_1009337462	3300005544	Switchgrass Rhizosphere	MTQQCPPHTWSATPLKDERGKAIFECSKCSTYITVDCKYLTKAEVTKCAATPETAA*
Ga0070696_1004862582	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MMQQCPPHTWSATPLKDERGKAIFECSKCSTYITVDCKYLTKAEVTKGAATQEAAT*
Ga0058697_103156781	3300005562	Agave	MTQQCPPHAWSETPLKDERDKAIFECSKCGTYITVDCKYLTKAEVQKLSATPAAAD*
Ga0066702_104384231	3300005575	Soil	MTQQCPPHTWSATPLKDERGKAIFECSKCGTYITGDCKYLTKAEMTKCAATQEAAD*
Ga0081455_101074102	3300005937	Tabebuia Heterophylla Rhizosphere	MTQQCPPHTWSATPLKDERGKAIFECSKCGTYITVDCKYLTKAEVQKLSATQDAA*
Ga0081538_100997072	3300005981	Tabebuia Heterophylla Rhizosphere	MTPTCPPHTWSATPLQDERGKSIFECSACGTYITGDCRYLSKAEVQQYSATPEAVA*
Ga0081538_103890201	3300005981	Tabebuia Heterophylla Rhizosphere	MTQQCPPHAWSATPLKDERGMAIFECSKCGTYITVDCKYLTKAEVQKLSATPEAAA*
Ga0081539_100153895	3300005985	Tabebuia Heterophylla Rhizosphere	MMQQCPPHTWSETSLKDDRDKAVFVCSKCGTYITVDCKYLTKAEVQKFSATQHAAA*
Ga0081539_100177486	3300005985	Tabebuia Heterophylla Rhizosphere	MTQQCPPHAWSATPLKDERDKAIFECSKCGTYITVDCKYLTKAEVQKLSATQDAA*
Ga0081539_104464063	3300005985	Tabebuia Heterophylla Rhizosphere	SHMTQQCPPHTWSPTPVKDDREKAIFECSKCGTYITGDCKYLSKAEFNAFSAAQGAPARQ
Ga0075417_100174493	3300006049	Populus Rhizosphere	MTQQCPPHTWSATPLKDDRGKAIWECSTCGTSITGDCKYLTKAEVQKFSATQEAAA*
Ga0075417_101026062	3300006049	Populus Rhizosphere	MMQQCPPHTWSATPLKDERGKAIFECSKCGTYITVDCKYLTKADVQKCAATQEAAD*
Ga0075417_104464241	3300006049	Populus Rhizosphere	MTQQCPPHTWSATPLKDERGKAIFECSKCGTYITVDCKYLTKAEVQKCAATPEAAA*
Ga0075417_104569851	3300006049	Populus Rhizosphere	MTQQCPPHTWSATPLKDERGKAIWECSKCGTYITGDCKYLTKAEVQKCAATPEAAA*
Ga0075427_100117042	3300006194	Populus Rhizosphere	MTQQCPPHTWSATPLKDERGKAIWECSKCGTYITGDCKYLTKAEVQKVSATQHVAA*
Ga0075428_1007325453	3300006844	Populus Rhizosphere	MTQQCPPHTWSATPLKDERGKAIFECSKGSTYITVDCTYLTKAEVTKCAATQEAAA*
Ga0075428_1013383702	3300006844	Populus Rhizosphere	MTQQCPPHAWSATPLKDERDKAIFECSKCGTYITVDCKYLTKAEVQQCAATPAAAD*
Ga0075421_1000381906	3300006845	Populus Rhizosphere	MTQTCPPHTWSATSLKDERGKSIFECAACGTYITGDCRYLTNAEVQQYAGTPAAVA*
Ga0075421_1002320472	3300006845	Populus Rhizosphere	MTQQCPPHTWSATPLKDERGKAIFECSKCSTYITVDCKYLTKAEVTKCAATQEAAA*
Ga0075421_1004475933	3300006845	Populus Rhizosphere	MTQQCPPHTWSATALKDDRGKTIFECSTCGTYITGDCQYLTKAEVQKFAATQQSAA*
Ga0075430_1001192103	3300006846	Populus Rhizosphere	MTQQCPPHTWSATAMKDERGKSIFQCATCGTYITGDCRYLSPAEVQQCAATQDAAA*
Ga0075433_106942412	3300006852	Populus Rhizosphere	MTQQCPPHAWSATPLKDERDKAIFACSKCGTYITVDCKYLTKAEVQKCAAPPAAAD*
Ga0075433_112718302	3300006852	Populus Rhizosphere	MTQQCPPHAWSETPLKDERGMAIFECSKCGTYITVDCKYLTKAEVQKVSATPAAAA*
Ga0075420_1000998633	3300006853	Populus Rhizosphere	MTQQCPPHTWSATSLKDERGKAIFECSKCSTYITVDCTYLTKAEVTKCAATQEAAA*
Ga0075420_1003763352	3300006853	Populus Rhizosphere	MTQQCPPHAWSETPLKDERDKAIFECSKCGTYITVDCKYLTKAEVQKCAATPAAAD*
Ga0075425_1030377471	3300006854	Populus Rhizosphere	CPPHTWSATPLKDERGKAIWECSKCGTYITGDCKYLTKAEVQKVSATQDVAA*
Ga0075434_1002379743	3300006871	Populus Rhizosphere	MTQQCPPHTWSATPLKDDRGKAIWECSTCGTYITGDCKYLTKAEVQKFSATQEAAA*
Ga0075429_1006011832	3300006880	Populus Rhizosphere	MTQQCPPHTWSETPLKDDRGKAIFECSKCGTYITVDCKYLTKAEVQQLSGTKDAAA*
Ga0075429_1010457272	3300006880	Populus Rhizosphere	MMQQCPPHTWSETSLKDDREKAVFVCSKCGTYITVDCTYLTQAEVQKFSATQHAAA*
Ga0075429_1019647891	3300006880	Populus Rhizosphere	MTQQCPPHTWSETPLKDERGKAIFACSKCSTYITVDCKYLTKAEVTKCAATQEAAA*
Ga0075424_1001627903	3300006904	Populus Rhizosphere	MTQQCPPHTWSATPLKDERGKAIWECSKCGTYITGDCKYLTKAEVQKVSATQDVAA*
Ga0075424_1026056361	3300006904	Populus Rhizosphere	MTQQCPPHAWSATPLKDERDKAIFECSKCGTYITVDCKYLTKAEVQKCAAPPAAAD*
Ga0075419_101286233	3300006969	Populus Rhizosphere	MMQQCPPHTWSATPLKDERGKAIFECSKCGTYITVDCKYLTKAEVTKCAATQEAAA*
Ga0075435_1013079711	3300007076	Populus Rhizosphere	MTQQCPPHAWSETPLKDERGMAIFECSKCGTYITVDCKYLTKAEVQKV
Ga0105679_101123552	3300007790	Soil	MTQQCPPHTWSETPLKDDRGKAIFACSKCGTYITVDCKYLTKAAVEKFAAPPKAAA*
Ga0105679_105039712	3300007790	Soil	MTQQCPPHTWSETPLKDEREKAIFVCSKCETYITVDCKYLTKAEVEKLSAPRDAAA*
Ga0066710_1036229431	3300009012	Grasslands Soil	MMQQCPPHTWSATPLKDERANAIFACSQCATSITVDCKYLTKADVQQCAATQEAAG
Ga0111539_104684492	3300009094	Populus Rhizosphere	MMQQCPPHTWSATPLKDERGKAIFECSKCGTYITVDCKYLTKADVQKC
Ga0075418_108398381	3300009100	Populus Rhizosphere	QCPPHAWSATPLKDERDKAIFECSKCGTYITVDCKYLTKAEVQQCAATPAAAD*
Ga0075418_114903881	3300009100	Populus Rhizosphere	MTQQCPPHTWSATPLKDERGKAIFECSKCGTYITVDCTYLTKAEVTKCAATQEAAA*
Ga0075418_117394842	3300009100	Populus Rhizosphere	RTMTQTCPPHTWSATSLKDERGKSIFECAACGTYITGDCRYLTNAEVQQYAGTPAAVA*
Ga0075418_126436921	3300009100	Populus Rhizosphere	MTQQCPPHTWSATPLKDERGKAIFECSKCSTYITVDCKYLTKAEVT
Ga0114129_113873413	3300009147	Populus Rhizosphere	MTQQCPPHTWSETPLKDDRGKAIFACSKCGTYITVDCKYLTKADVQQCAATQEAAD*
Ga0114129_115439341	3300009147	Populus Rhizosphere	QCPPHTWSATPLKDERGKAIWECSKCGTYITGDCKYLTKAEVQKVSATQDVAA*
Ga0075423_106518772	3300009162	Populus Rhizosphere	MTQQCPPHTWSATPLKDERGKAIFECSKCGTYITVDCKYLTKAEVTKCAATPEAAA*
Ga0075423_111793862	3300009162	Populus Rhizosphere	PHTWSATPLKDERGKAIWECSKCGTYITGDCKYLTKAEVQKVSATQDVAA*
Ga0075423_115628913	3300009162	Populus Rhizosphere	TWSATPLKDERGKAIWECSKCGTYITGDCKYLTKAEVQKCAATPEAAA*
Ga0075423_126269151	3300009162	Populus Rhizosphere	MTQQCPPHAWSATPLKDERDKAIFECSKCGTYITVDCKYLTKAEVQQCAAPPAAAD*
Ga0075423_128852531	3300009162	Populus Rhizosphere	MTQQCPPHAWSETPLKDERGMAIFECSKCGTYITVDCKYLTKAEVQKVSATP
Ga0105249_123403751	3300009553	Switchgrass Rhizosphere	MTQQCPPHTWSETPLKDERGKAIFECSKCGTYITVDCKYLTKAEVQKCAATPEAVA*
Ga0126315_103224642	3300010038	Serpentine Soil	MTQTCPPHTWSATPLKDERGKSIFECATCGTYITGDCRYLTKAEVEQYSATPEAVA*
Ga0126312_105023671	3300010041	Serpentine Soil	MTQTCPPHTWSATPLKDERGKSIFECATCGTYITGDCRYLTKAEVQQYSATQEAVA*
Ga0127433_1198311	3300010064	Grasslands Soil	MTQQCPPHTWSATPLKDERGKAIWECSKCGTYITGDCKYLTTAEVQKCAATPAA
Ga0127442_1154112	3300010068	Grasslands Soil	MTQQCPPHTWSATPLKDERGKAIWECSKCGTYITGDCKYLTTAEVQKCAATQEAAA*
Ga0127477_1617711	3300010071	Grasslands Soil	MTEQCPPHTWSATPLQDERGKAIFECSKCGTYITVDCKYLTKAEVQKFVATPEAAA*
Ga0127429_1201161	3300010073	Grasslands Soil	MTQQCPPHTWSATPLKDERGKAIFECSKCGTYITVDCKYLTKADVQNCAATQDAAA*
Ga0127439_1581411	3300010074	Grasslands Soil	MTQQCPPHTWSATALKDERGKAIFACFKCGTYITVDCKYLTKADVQKCAATQDAAA*
Ga0127437_1065871	3300010077	Grasslands Soil	MTQQCPPHTWSATPLKDERGKAIFECSKCGTYITVDCKYLTKAEVQKSAATPEAAA*
Ga0127469_1560062	3300010082	Grasslands Soil	MTQQCPPHAWSETPLKDERDKAIFECSKCGTYITVDCKYLTKAEVQKCAATP
Ga0127476_10424832	3300010088	Grasslands Soil	MTQQCPPHTWSATPLKDERGKAIFECSKCGTSITGDCKYLTKADVQQCAATQEAAA*
Ga0127471_10706541	3300010090	Grasslands Soil	MTQQCPPHTWSATPLKDERGKAIFACSTCGTYITVDCKYLTKAEVQKFVATPEAAA*
Ga0127475_10000993	3300010095	Grasslands Soil	PPHTWSATALKDERGKAIFACFKCGTYITVDCKYLTQADVQQCAATQDAAA*
Ga0127475_10055311	3300010095	Grasslands Soil	MMQQCPPHTWSATPLKDERGKAIFECSKCGTYITVDCKYLTKADVQKCAATQDAAA*
Ga0127450_10863972	3300010099	Grasslands Soil	MMQQCPPHTWSATPLKDERGKAIFECSKCGTYITGDCKYLTKAEVTKCAATQEAAD*
Ga0127440_10756301	3300010100	Grasslands Soil	MTQQCPPHTWSATPLKDERGKAIFECSKCGTSITGDCKYLTKADVQQCAATQEAAD*
Ga0127470_11206402	3300010105	Grasslands Soil	MTQQCPPHTWSATPLKDERDKAIFACSKCGTYITVDCKYLTEAEVQKCA
Ga0127472_10228141	3300010106	Grasslands Soil	MTQQCPPHTWSETPLKDERGKAIFECSKCGTYITVDCKYLTKAEVQKSAATPEAAA*
Ga0127474_11316812	3300010108	Grasslands Soil	MTQQCPPHTWSATALKDERGKAIFECSKCGTYITVDCKYLTEAEVQKCAATQEAAA*
Ga0127444_10560961	3300010113	Grasslands Soil	MMQQCPPHTWSATALKDERGKAIFACSKCGTYITVDCKYLTKADVQQCAATQEAAD*
Ga0127465_10117702	3300010118	Grasslands Soil	MMQQCPPHTWSATPLKDERGKAIFECSKCGTYITVDCKYLTKADVQQCAAMQEAAD*
Ga0127464_11194112	3300010139	Grasslands Soil	MTQQCPPHAWSETPLKDERDKAILECSKCGTYITVDCKYLTKAEVQKCAATPAAAD*
Ga0127464_11467461	3300010139	Grasslands Soil	MMQQCPPHTWSATPLKDERGKAIFECSKCGTSITVDCKYLTKADVQKCAAMQEAAD*
Ga0127483_12602361	3300010142	Grasslands Soil	MTQQCPPHTWSATPLKDERGKAIWECSKCGTYITGDCKYLTTAEVQKCAATPAAA
Ga0126321_12927832	3300010145	Soil	MTQQCPPHTWSATPLKDERDKAIFECSKCGTYITVDCKYLTKADVQK
Ga0126321_14923401	3300010145	Soil	MMQQCPPHTWSATPLKDERGKAIFECSKCGTYITVDCKYLTKADMQKCAATQEAAD*
Ga0134127_121170521	3300010399	Terrestrial Soil	MTQQCPPHTWSATPLKDERGKAIFECSKCSTYITVDCKYLTKADVQKCAATQEAAD*
Ga0134123_120092932	3300010403	Terrestrial Soil	MMQQCPPHTWSATPLKDERGKAIFACSKCGTYITVDCKYLTMADVQKCAATQEAAD*
Ga0137365_103435702	3300012201	Vadose Zone Soil	MTQQCPPHTWSETPLKDERGKAIFECPKCGTYITVDCKYLTKAEVTKFAATQEAAA*
Ga0150985_1036356782	3300012212	Avena Fatua Rhizosphere	MMQQCPPHTWSATPLKDERGKAIFECSKCGTYITVDCKYLTKADVQQCAATQEAAD*
Ga0137371_112870531	3300012356	Vadose Zone Soil	MTQQCPPHTWSATPLKDERGKALFECSKCGTFITGDCKYLTKAEMTKCAATQEAAD*
Ga0134037_10423202	3300012372	Grasslands Soil	MTQQCPPHTWSETPLKDERGKAIFECSKCGTYITVDCKYLTKADVQKCAATPEAAA*
Ga0134025_12381962	3300012378	Grasslands Soil	MMQQCPPHTWSATPLKDERGKAIFACSKCGTYITVDCQYLTKADVQQCAATQEAAD*
Ga0134036_12653812	3300012384	Grasslands Soil	MMQQCPPHTWSATPLKDERGKAIFACSKCGTYITVDCQYLTKADVQQCAA
Ga0134040_11954501	3300012389	Grasslands Soil	PHTWSATPLKDERGKAIWECSKCGTYITGDCKYLTTAEVQKCAATPAAAD*
Ga0134040_12601623	3300012389	Grasslands Soil	MTQQCPPHTWSATPLKDERDKAIFACSKCGTYITVDCKYLTEAEVQKCAATQEAAA*
Ga0134040_12824962	3300012389	Grasslands Soil	MTQQCPPHTWSATPLKDERGKAIWECSKCGTYITGDCKYLTTAEVQKCAATPA
Ga0134044_11816101	3300012395	Grasslands Soil	MTEQCPPHTWSATPLQDERGKAIFECSKCWTYIPVDCKYLTRAEVEKFAATQEAAA*
Ga0134051_10476912	3300012398	Grasslands Soil	MTQQCPPHTWSATPLKDERGKAIWECSKCGTYITGDCKYLTTAEVQQCAATPAAAD*
Ga0134024_10426671	3300012404	Grasslands Soil	MTQQCPPHTWSATPLKDERGKAIFECSKCGTYITVDCKYLTKAEVTKCAATQEAAD*
Ga0134024_14257852	3300012404	Grasslands Soil	MTQQCPPHTWSATPLKDERDKAIFACSKCGTYITVDCKYLTEAEVQKCAATQQAAA*
Ga0134041_12421932	3300012405	Grasslands Soil	MMQQCPPHTWSATALKDERGKAIFECSKCGTYITVDCQYLTKADVQQCAATQEAAD*
Ga0134050_11178231	3300012407	Grasslands Soil	MTQQCPPHTWSATPLKDERGKALFECSKCGTSITGDCKYLTTAEVQKCAATPAAAD*
Ga0150984_1033197311	3300012469	Avena Fatua Rhizosphere	MTQQCPPHNWSTTPLKDDRDKAIFECSTCGTYITVDCKYLTKAEVEKFSATQEAAA*
Ga0150984_1120676432	3300012469	Avena Fatua Rhizosphere	MTQQCPPHTWSATPLKDERDKAIFECSKCGTYITVDCKYLTKADVQKLAATPAAAD*
Ga0157375_106298082	3300013308	Miscanthus Rhizosphere	MTQQCPPHTWSATPLKDERGKAIWECSKCGTYITGDCKYLTKAEVQKCAATPAAAD*
Ga0157379_121114281	3300014968	Switchgrass Rhizosphere	MTQQCPPHTWSATPLKDERGKAIFECSKCGTSITVDCKYLTKAEVQKCAATPEAAA*
Ga0163161_104130751	3300017792	Switchgrass Rhizosphere	NMMQQCPPHTWSATPLKDERGKAIFECSKCGTYITVDCKYLTKADVQKCAATQEAAD
Ga0190265_128596481	3300018422	Soil	MTQTCPPHTWSATPLKDERGKSIFECSACGTYITGDCRYLTEAEVQQYSATPEAVA
Ga0190268_101808432	3300018466	Soil	MTLTCPPHTWSATPLKDERGKSIFECSACGTYITGDCRYLTEAEVQQYSATQEAVA
Ga0190268_105896491	3300018466	Soil	MTQQCPPHTWSATPLKDERGKAIFECSKCGTYITVDCKYLTKAEVQKCAATPEAAA
Ga0190268_111869932	3300018466	Soil	MTPTCPPHTWSATLLQDERGKSIFKCATCGTYITGDCRYLTEAEVQQYSATPEAVA
Ga0066662_118680111	3300018468	Grasslands Soil	MTQQCPPHTWSATPLKDERGKAIFECSKCGTYITVDCKYLTKAEVTKCAATQEAAA
Ga0187893_108393071	3300019487	Microbial Mat On Rocks	MTQQCPPHTWSATPLKDERGKAIFECPKCGTYITVDCKYLTKADVQKCAATQDATA
Ga0206356_100211902	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MMQQCPPHTWSATPLKDERGKAIFACSKCGTYITVDCKYLTKADVQKCAATQEAAD
Ga0212128_100937052	3300022563	Thermal Springs	MTQQCPPHTWSATPLKDERGKAIFECPTCGTYITVDCKYLTKAEVQQLSATQAAA
Ga0207662_100509053	3300025918	Switchgrass Rhizosphere	RGNRNMMQQCPPHTWSATPLKDERGKAIFACSKCGTYITVDCKYLTKADVQKCAATQEAA
Ga0209461_100373161	3300027750	Agave	MTQQCPPHTWSETPLKDDRSKAIFACSKCGTYITVDCKYLTKAAVEKFAAPPKAA
Ga0209814_100925111	3300027873	Populus Rhizosphere	MMQQCPPHTWSATPLKDERGKAIFECSKCGTYITVDCKYLTKADVQKCAATQEAAD
Ga0209814_101254611	3300027873	Populus Rhizosphere	MTQQCPPHTWSATPLKDERGKAIWECSKCGTYITGDCKYLTKAEVQKCAATPEAAA
Ga0209814_105395921	3300027873	Populus Rhizosphere	MTQQCPPHTWSATPLKDDRGKAIWECSTCGTYITGDCKYLTKAEVQKFSATQEAAA
Ga0209481_102612561	3300027880	Populus Rhizosphere	MTQQCPPHTWSATPLKDERGKAIFECSKCSTYITVDCKYLTKAEVTKCAATQEAAA
Ga0209481_107522902	3300027880	Populus Rhizosphere	MTQQCPPHTWSATPLKDERGKAIFECSKCGTYITVDCKYLTKAEVQKCA
Ga0209382_1000252731	3300027909	Populus Rhizosphere	MTQTCPPHTWSATSLKDERGKSIFECAACGTYITGDCRYLTNAEVQQYAGTPAAVA
Ga0209382_109351631	3300027909	Populus Rhizosphere	MTQQCPPHAWSATPLKDERDKAIFECSKCGTYITVDCKYLTKAEVQQCAATPAAAD
Ga0268265_112319191	3300028380	Switchgrass Rhizosphere	TWSATPLKDERGKAIFACSKCGTYITVDCKYLTKADVQKCAATQEAAD
Ga0308205_10082542	3300030830	Soil	MTPTCPPHTWSATPLKDERGKSIFKCSACGTYITGDCRYLTEAEVQQYSATQEAVA
Ga0308205_10128271	3300030830	Soil	MMQQCPPHTWSATPLKDERGKAIFACSKCGTYITVDCKYLTKADVQQCAATQEAAD
Ga0308206_10219851	3300030903	Soil	MMQQCPPHTWSATPLKDERGKAIFECSKCGTYITVDCKYLTKADVQQCAATQEAAD
Ga0308206_10315122	3300030903	Soil	MTQTCPPHTWSATPLKDERGKSIFECSACGTYITGDCRYLTEAEVQQYSATQEAVA
Ga0308204_100591381	3300031092	Soil	MTSTCPPHTWSATPLQDERGKSIFECATCGTYITGDCRYLTEADVQQYAATPEAVA
Ga0308197_103477291	3300031093	Soil	MMQQCPPHTWSATPLKDERGKAIFACSKCGTYITVDCKYLTKADVQKLAAPPEAAA
Ga0307468_1024896302	3300031740	Hardwood Forest Soil	MTPTCPPHTWSATPLQDERGKSIFKCATCGTYITGDCRYLTEAEVQQYAAAPEAVA
Ga0307410_106462271	3300031852	Rhizosphere	MTQQCPPHSWSATQLKDDRGKAIFECSKCGTYITVDCKYLTKAEVEKFSA
Ga0307409_1028697151	3300031995	Rhizosphere	NMTQQCPPHSWSATQLKDDRGKAIFECSKCGTYITVDCKYLTKAEVEKFSATQEAAA
Ga0307416_1006438732	3300032002	Rhizosphere	MTQQCPPHSWSATQLKDDRGKAIFECSKCGTYITVDCKYLTKAEVEKFSATQEAAA
Ga0307415_1014114121	3300032126	Rhizosphere	MTQTCPPHTWSATPLKDERGKSIFECSTCGTYITGDCRYLTKAEVQQYSATQEAVA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052033

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences