Metagenome Family F052002

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052002
Family Type	Metagenome
Number of Sequences	143
Average Sequence Length	108 residues
Representative Sequence	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGISQQSDFPEFQT
Number of Associated Samples	91
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	83.22 %
% of genes near scaffold ends (potentially truncated)	23.78 %
% of genes from short scaffolds (< 2000 bps)	86.71 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (64.336 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (22.378 % of family members)
Environment Ontology (ENVO)	Unclassified (52.448 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (66.434 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.20% β-sheet: 0.00% Coil/Unstructured: 51.80%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF11752	DUF3309	17.48
PF13392	HNH_3	2.10
PF01555	N6_N4_Mtase	1.40
PF07589	PEP-CTERM	0.70
PF13403	Hint_2	0.70
PF03496	ADPrib_exo_Tox	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG0863	DNA modification methylase	Replication, recombination and repair [L]	1.40
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	1.40
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	1.40
COG5585	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	Mobilome: prophages, transposons [X]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.34 %
All Organisms	root	All Organisms	35.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.34 %
cellular organisms	root	All Organisms → cellular organisms	31.47 %
Viruses	superkingdom	All Organisms → Viruses	4.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.34 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.07 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	4.20 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.34 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.17 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	4.20 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	1.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.34 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16.78 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	4.20 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	1.40 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.34 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	4.20 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.10 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.10 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	1.40 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.34 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	4.20 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.10 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	1.40 %
Natrialbales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Natrialbales	1.40 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.34 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4.20 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.10 %
Natrialbaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Natrialbales → Natrialbaceae	1.40 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1.40 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.34 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4.20 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.10 %
Natrinema	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Natrialbales → Natrialbaceae → Natrinema	1.40 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1.40 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.34 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4.20 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.10 %
unclassified Natrinema	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Natrialbales → Natrialbaceae → Natrinema → unclassified Natrinema	1.40 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1.40 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.34 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4.20 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.10 %
Natrinema sp. DC36	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Natrialbales → Natrialbaceae → Natrinema → unclassified Natrinema → Natrinema sp. DC36	1.40 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1.40 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002244\|JGI24742J22300_10046032	Not Available	784	Open in IMG/M
3300004114\|Ga0062593_101443678	Not Available	738	Open in IMG/M
3300004114\|Ga0062593_101802038	Not Available	673	Open in IMG/M
3300004643\|Ga0062591_102243746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	569	Open in IMG/M
3300005288\|Ga0065714_10156361	Not Available	1076	Open in IMG/M
3300005290\|Ga0065712_10089547	All Organisms → cellular organisms → Bacteria	2458	Open in IMG/M
3300005290\|Ga0065712_10158458	Not Available	1319	Open in IMG/M
3300005290\|Ga0065712_10319668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	830	Open in IMG/M
3300005293\|Ga0065715_10377156	Not Available	912	Open in IMG/M
3300005329\|Ga0070683_100082627	All Organisms → cellular organisms → Bacteria → Proteobacteria	3008	Open in IMG/M
3300005329\|Ga0070683_100148459	All Organisms → cellular organisms → Bacteria	2222	Open in IMG/M
3300005329\|Ga0070683_100331164	Not Available	1450	Open in IMG/M
3300005329\|Ga0070683_100361441	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1383	Open in IMG/M
3300005330\|Ga0070690_100336355	All Organisms → cellular organisms → Bacteria → Proteobacteria	1092	Open in IMG/M
3300005331\|Ga0070670_100784960	Not Available	860	Open in IMG/M
3300005337\|Ga0070682_100794253	Not Available	768	Open in IMG/M
3300005338\|Ga0068868_100053013	All Organisms → cellular organisms → Bacteria → Proteobacteria	3195	Open in IMG/M
3300005338\|Ga0068868_100337522	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300005340\|Ga0070689_100018219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5169	Open in IMG/M
3300005354\|Ga0070675_100332218	Not Available	1345	Open in IMG/M
3300005354\|Ga0070675_100770215	All Organisms → cellular organisms → Bacteria → Proteobacteria	879	Open in IMG/M
3300005354\|Ga0070675_101193448	Not Available	701	Open in IMG/M
3300005355\|Ga0070671_102022163	Not Available	513	Open in IMG/M
3300005356\|Ga0070674_100404665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1116	Open in IMG/M
3300005356\|Ga0070674_100579767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	945	Open in IMG/M
3300005364\|Ga0070673_100843728	Not Available	848	Open in IMG/M
3300005364\|Ga0070673_101167667	Not Available	721	Open in IMG/M
3300005441\|Ga0070700_101109911	Not Available	656	Open in IMG/M
3300005456\|Ga0070678_100112104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2135	Open in IMG/M
3300005457\|Ga0070662_100404383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1127	Open in IMG/M
3300005459\|Ga0068867_100330393	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300005535\|Ga0070684_100238359	Not Available	1661	Open in IMG/M
3300005535\|Ga0070684_101020334	Not Available	777	Open in IMG/M
3300005535\|Ga0070684_101379390	Not Available	664	Open in IMG/M
3300005535\|Ga0070684_101480700	Not Available	640	Open in IMG/M
3300005539\|Ga0068853_102196721	Not Available	535	Open in IMG/M
3300005617\|Ga0068859_103011205	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	515	Open in IMG/M
3300005840\|Ga0068870_11086253	Not Available	575	Open in IMG/M
3300006237\|Ga0097621_100032445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4151	Open in IMG/M
3300006237\|Ga0097621_100505103	Not Available	1095	Open in IMG/M
3300006237\|Ga0097621_101183379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	720	Open in IMG/M
3300006358\|Ga0068871_100432036	Not Available	1177	Open in IMG/M
3300006881\|Ga0068865_100682931	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300009148\|Ga0105243_10213381	Not Available	1701	Open in IMG/M
3300009168\|Ga0105104_10603243	Not Available	625	Open in IMG/M
3300009176\|Ga0105242_10555700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1101	Open in IMG/M
3300009176\|Ga0105242_11637888	Not Available	678	Open in IMG/M
3300009177\|Ga0105248_11079762	Not Available	907	Open in IMG/M
3300009177\|Ga0105248_11575346	Not Available	744	Open in IMG/M
3300009545\|Ga0105237_10869235	All Organisms → cellular organisms → Bacteria → Proteobacteria	908	Open in IMG/M
3300009551\|Ga0105238_10014434	All Organisms → cellular organisms → Bacteria	7987	Open in IMG/M
3300009553\|Ga0105249_11334180	Not Available	789	Open in IMG/M
3300009553\|Ga0105249_13259710	Not Available	522	Open in IMG/M
3300010375\|Ga0105239_11378622	Not Available	814	Open in IMG/M
3300011429\|Ga0137455_1031224	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1473	Open in IMG/M
3300011442\|Ga0137437_1269806	Not Available	585	Open in IMG/M
3300012882\|Ga0157304_1061489	Not Available	604	Open in IMG/M
3300012892\|Ga0157294_10009587	Not Available	1648	Open in IMG/M
3300012899\|Ga0157299_10224160	Not Available	581	Open in IMG/M
3300012900\|Ga0157292_10187999	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	683	Open in IMG/M
3300012901\|Ga0157288_10033076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1092	Open in IMG/M
3300012903\|Ga0157289_10038874	Not Available	1155	Open in IMG/M
3300012903\|Ga0157289_10154481	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Natrialbales → Natrialbaceae → Natrinema → unclassified Natrinema → Natrinema sp. DC36	711	Open in IMG/M
3300012905\|Ga0157296_10043354	Not Available	1023	Open in IMG/M
3300012906\|Ga0157295_10032815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1134	Open in IMG/M
3300012906\|Ga0157295_10074831	All Organisms → cellular organisms → Bacteria → Proteobacteria	871	Open in IMG/M
3300012915\|Ga0157302_10168472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	760	Open in IMG/M
3300012916\|Ga0157310_10257817	Not Available	664	Open in IMG/M
3300012916\|Ga0157310_10282023	Not Available	643	Open in IMG/M
3300013296\|Ga0157374_10162422	Not Available	2176	Open in IMG/M
3300013296\|Ga0157374_10628516	Not Available	1085	Open in IMG/M
3300013296\|Ga0157374_11148811	Not Available	797	Open in IMG/M
3300013297\|Ga0157378_10257535	Not Available	1673	Open in IMG/M
3300013306\|Ga0163162_10880785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1009	Open in IMG/M
3300013308\|Ga0157375_10253192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1922	Open in IMG/M
3300014325\|Ga0163163_11127519	All Organisms → cellular organisms → Bacteria → Proteobacteria	847	Open in IMG/M
3300014745\|Ga0157377_10569342	Not Available	803	Open in IMG/M
3300014745\|Ga0157377_10644002	Not Available	762	Open in IMG/M
3300014968\|Ga0157379_10866072	Not Available	855	Open in IMG/M
3300014969\|Ga0157376_10328832	Not Available	1456	Open in IMG/M
3300014969\|Ga0157376_10381926	Not Available	1357	Open in IMG/M
3300014969\|Ga0157376_10492707	Not Available	1203	Open in IMG/M
3300014969\|Ga0157376_11646847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	676	Open in IMG/M
3300014969\|Ga0157376_12226438	Not Available	587	Open in IMG/M
3300015200\|Ga0173480_10170294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1129	Open in IMG/M
3300015200\|Ga0173480_10558768	Not Available	695	Open in IMG/M
3300015200\|Ga0173480_10710466	Not Available	631	Open in IMG/M
3300015200\|Ga0173480_11161325	Not Available	519	Open in IMG/M
3300015201\|Ga0173478_10177745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	872	Open in IMG/M
3300017792\|Ga0163161_10929849	Not Available	738	Open in IMG/M
3300017792\|Ga0163161_12093028	Not Available	503	Open in IMG/M
3300018073\|Ga0184624_10113987	Not Available	1166	Open in IMG/M
3300018073\|Ga0184624_10512010	Not Available	521	Open in IMG/M
3300018083\|Ga0184628_10000898	Not Available	15271	Open in IMG/M
3300018083\|Ga0184628_10026658	Not Available	2869	Open in IMG/M
3300018476\|Ga0190274_10037787	All Organisms → cellular organisms → Bacteria → Proteobacteria	3371	Open in IMG/M
3300019361\|Ga0173482_10236648	Not Available	770	Open in IMG/M
3300019362\|Ga0173479_10013465	All Organisms → cellular organisms → Bacteria → Proteobacteria	2177	Open in IMG/M
3300019362\|Ga0173479_10355314	Not Available	690	Open in IMG/M
3300019362\|Ga0173479_10772048	Not Available	528	Open in IMG/M
3300019876\|Ga0193703_1030174	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Natrialbales → Natrialbaceae → Natrinema → unclassified Natrinema → Natrinema sp. DC36	841	Open in IMG/M
3300019876\|Ga0193703_1034446	Not Available	787	Open in IMG/M
3300020016\|Ga0193696_1001152	Not Available	8260	Open in IMG/M
3300021082\|Ga0210380_10103258	Not Available	1261	Open in IMG/M
3300021082\|Ga0210380_10273638	Not Available	767	Open in IMG/M
3300021082\|Ga0210380_10366105	Not Available	658	Open in IMG/M
3300021510\|Ga0222621_1091718	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	643	Open in IMG/M
3300022756\|Ga0222622_10078185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1970	Open in IMG/M
3300022883\|Ga0247786_1118102	Not Available	582	Open in IMG/M
3300023077\|Ga0247802_1008942	Not Available	1287	Open in IMG/M
3300025315\|Ga0207697_10040806	Not Available	1905	Open in IMG/M
3300025908\|Ga0207643_10661888	Not Available	674	Open in IMG/M
3300025925\|Ga0207650_10557641	Not Available	961	Open in IMG/M
3300025926\|Ga0207659_10849770	Not Available	784	Open in IMG/M
3300025926\|Ga0207659_10952818	Not Available	738	Open in IMG/M
3300025926\|Ga0207659_11201992	Not Available	652	Open in IMG/M
3300025927\|Ga0207687_10016446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4859	Open in IMG/M
3300025927\|Ga0207687_10499609	Not Available	1015	Open in IMG/M
3300025930\|Ga0207701_10021063	All Organisms → cellular organisms → Bacteria → Proteobacteria	6245	Open in IMG/M
3300025930\|Ga0207701_10174833	Not Available	1896	Open in IMG/M
3300025930\|Ga0207701_10511320	Not Available	1027	Open in IMG/M
3300025933\|Ga0207706_10077044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2933	Open in IMG/M
3300025935\|Ga0207709_11846588	Not Available	503	Open in IMG/M
3300025937\|Ga0207669_10363733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1122	Open in IMG/M
3300025937\|Ga0207669_10498422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	974	Open in IMG/M
3300025938\|Ga0207704_10875934	Not Available	754	Open in IMG/M
3300025944\|Ga0207661_10411942	Not Available	1227	Open in IMG/M
3300025944\|Ga0207661_11011789	Not Available	765	Open in IMG/M
3300025944\|Ga0207661_11068153	Not Available	743	Open in IMG/M
3300025960\|Ga0207651_10159554	Not Available	1766	Open in IMG/M
3300025960\|Ga0207651_10715223	Not Available	883	Open in IMG/M
3300025961\|Ga0207712_11300803	Not Available	650	Open in IMG/M
3300026067\|Ga0207678_10402838	Not Available	1185	Open in IMG/M
3300026089\|Ga0207648_10597964	Not Available	1016	Open in IMG/M
3300026121\|Ga0207683_10178304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1926	Open in IMG/M
3300026121\|Ga0207683_11401620	Not Available	646	Open in IMG/M
3300026142\|Ga0207698_12464840	Not Available	531	Open in IMG/M
3300028712\|Ga0307285_10000399	All Organisms → cellular organisms → Bacteria → Proteobacteria	9103	Open in IMG/M
3300028712\|Ga0307285_10004172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2878	Open in IMG/M
3300028712\|Ga0307285_10021544	Not Available	1488	Open in IMG/M
3300028754\|Ga0307297_10056119	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1224	Open in IMG/M
3300028790\|Ga0307283_10064370	Not Available	901	Open in IMG/M
3300031716\|Ga0310813_10568755	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	53.15%
Environmental	Environmental	46.85%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	53.15%
Terrestrial	Environmental → Terrestrial	38.46%
Aquatic	Environmental → Aquatic	8.39%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	38.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	32.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.78%
Sediment	Environmental → Aquatic → Sediment	5.59%
Roots	Host-Associated → Plants → Roots	3.50%
Freshwater	Environmental → Aquatic → Freshwater	2.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.99%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.19%
Loam	Environmental → Terrestrial → Soil → Loam	10.49%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.50%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.50%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.80%
Soil	Host-Associated → Plants → Rhizoplane → Soil	2.10%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.49%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.50%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	3.50%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	2.10%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	22.38%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	8.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	8.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	6.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.20%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	3.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.80%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.10%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	2.10%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	2.10%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.10%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.10%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.40%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.40%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.40%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.40%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002244	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24742J22300_100460323	3300002244	Corn, Switchgrass And Miscanthus Rhizosphere	LGFLLTARAKAAEQVVAANVRAQACKVDLIEHITRRIQDGADRLRLRHRLLESGMPPSIVAAIMNAATDAVRPTRVTGSASQQTDLPYGQS*
Ga0062593_1014436781	3300004114	Soil	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQASKVDLIEHITRRLQDGADRLRLRHRLLESGMPPSIVAAIMSAATDAACPDRPAGVTGGASQQSDFPEFQT*
Ga0062593_1018020382	3300004114	Soil	LGFLLTARAKAAEQVVAANVRAQACKVDLIEHITRRIQDGADRLRLRHRLRESGMPPSIVAAIMNAATDAVRPTRVTGSASQQTDLPYGQS*
Ga0062591_1022437462	3300004643	Soil	MGAHMMQLIHVERTSATSDDERLGFLLTARAKAAEQVVAANVRAQASKVDLIEHVTRRLQDGADRLRLRHRLLESGMPPSIVAAIMSAATDAVRPDRVTGGASQQTDFPEFQT*
Ga0065714_101563612	3300005288	Miscanthus Rhizosphere	MQLIHIERVSATSDDQRLGFLLTARAKAAEQVVCANLRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGISQQDLPYGGA*
Ga0065712_100895473	3300005290	Miscanthus Rhizosphere	MDLIHIERITATSDDERLGFLLKARAKAAEQVVCANLRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGISQQDLPYGGA*
Ga0065712_101584583	3300005290	Miscanthus Rhizosphere	MQLIHIERVSATSDDQRLGFLLAARAKAAEQVVAANVRAQAARQDIVEHLTRRLQAGEDRIRLRHRLLESGMPDSAVSTIMHAATDAVRPTGVTGGISQQTDFPEFQT*
Ga0065712_103196682	3300005290	Miscanthus Rhizosphere	MQLIHIERVSATSDDQRLGFLLTARAKAAEQVVAAILRSQMARQDLIEHVTRRLQAGANKFELRHTMLKSGMPRGAVLEILSAATDAVRPTRVAGGTNQQTDFPEFQT*
Ga0065715_103771562	3300005293	Miscanthus Rhizosphere	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGISQQDL
Ga0070683_1000826273	3300005329	Corn Rhizosphere	MHLIYIERITATSDDERLGFLLTARAKAAEQVVAANVRAQASKVDLIEHITRRLQDGADRLRLRHRLLESGMPPSIVAAIMSAATDAACPDRPAGVTGGASQQSDFPEFQT*
Ga0070683_1001484593	3300005329	Corn Rhizosphere	MGAHLMQLIHIERVSATSDDERLGFLLAARAKAAEQVVAANVRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPGSIADAIMRAATDAVRPTRVTGGISQQSDLPYGQS*
Ga0070683_1003311644	3300005329	Corn Rhizosphere	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGISQQDLPYGQS*
Ga0070683_1003614413	3300005329	Corn Rhizosphere	MQLIHVERITATSDDERLGFLLTARAKAAEQVVAANVRAQASKIDLIEHITRRLQDGADRLRLRHRLLESGMPGSIADAIMRAATDAVRPTRVTGSANQQSDFPEFQT*
Ga0070690_1003363552	3300005330	Switchgrass Rhizosphere	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGISQQSDLPEF*
Ga0070670_1007849602	3300005331	Switchgrass Rhizosphere	MQLIHIERVSATSDDQRLGFLLAARAKAAEQVVAANVRAQAARQDIVEHLTRRLQAGEDRIRLRHRLLESGMPDSAVSTIMSAATDAGRPTRVAGGTNQQSDFPEFQR*
Ga0070682_1007942531	3300005337	Corn Rhizosphere	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQACKVDLIEHITRRIQDGADRLRLRHRLLESGMPPSIVAAIMNAATDAVRPTRVTGSASQQTDLPYGQS*
Ga0068868_1000530134	3300005338	Miscanthus Rhizosphere	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDTACPDRPAGVTGGASQQSDFPEFQT*
Ga0068868_1003375222	3300005338	Miscanthus Rhizosphere	MGAYLMQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQASKVDLIEHVTRRLQDGADRLRLRHRLLESGMPTSIADAIMRAATDAVRPTRVAGGTNQQSDLPYGGA*
Ga0070689_1000182194	3300005340	Switchgrass Rhizosphere	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQASKVDLIEHVTRRLQAGADRLRLRHRLLESGMPPSIVAAIMSAATDAACPDRPAGVTGGVSQQDLPYGGA*
Ga0070675_1003322183	3300005354	Miscanthus Rhizosphere	MDLIHIERITATSDDERLGFLLTARAKAAEQVVAANVRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPPSIVAAIMGAATDAVRPTRVTGSASQQTDLPYGGA*
Ga0070675_1007702152	3300005354	Miscanthus Rhizosphere	MGAYLMQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQASKTDLVEHITRRLQDGADRIRLRHRLLESGMPPSIVAAIMSAATDAVRPDRVTGGASQQTDFPEFQT*
Ga0070675_1011934482	3300005354	Miscanthus Rhizosphere	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAAILRSQMARQDLIEHVTRRLQAGANKFELRHTMLKSGMPRVAVLEILSAATDAACPDRVTGGASQQTDFPEFQT*
Ga0070671_1020221632	3300005355	Switchgrass Rhizosphere	DLIHIERITATSDDERLGFLLKARAKAAEQVVCANLRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGISQQDLPYGGA*
Ga0070674_1004046652	3300005356	Miscanthus Rhizosphere	MQLIHIERVSATSDDQRLGFLLTARAKAAEQVVCANLRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDTACPDRPAGVTGSANQQTDLPYGGA*
Ga0070674_1005797672	3300005356	Miscanthus Rhizosphere	MQLIHIERVSATTDDERLGFLLTARAKAAEQVVAANVRAQASKVDLIEHITRRIQDGADRLRLRHRLLESGMPPSIVAAIMSAATDAVRPARVTGGANQQTDFPEFQR*
Ga0070673_1008437283	3300005364	Switchgrass Rhizosphere	MDLIHIERITATSDDERLGFLLTARAKAAEQVVAANVRAQASKTDLVEHITRRLQDGADRIRLRHRLLESGMPGSIADAIMRAATDAACPDRPAGVTGGISQQ
Ga0070673_1011676672	3300005364	Switchgrass Rhizosphere	MQLVHIEHVSAVSDDERLGFLLTARAKAAEQVVAANVRAQASKVDLIEHVTRRLQAGADRLRLRHRLLESGMPPSIVAAIMSAATDAACPDRPAGVTGGVSQQDLPYGGA*
Ga0070700_1011099111	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MQLIHIERVSATSDDQRLGFLLTARAKAAEQVVAANVRAQASKVDLIEHITRRLQDGADRLRLRHRLLESGMPPSIVAAIMSAATDAVRPDRVTGGASQQTDFPEFQT*
Ga0070678_1001121042	3300005456	Miscanthus Rhizosphere	MQLIHIERVSAVSDDQRLGFLLTARAKAAEQVVAANVRAQACKVDLIEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRDATDAACPDRPAGVTGGISQQSDFPEFQT*
Ga0070662_1004043831	3300005457	Corn Rhizosphere	MQLIHIERVSATSDDQRLGFLLTARAKAAEQVVCANLRAHACKIDLIEHITRRIQDGADRVRLRHRLLESGMPPSIVAAIMSAATDAVRPARVTGGANQQTDFPEFQR*
Ga0068867_1003303933	3300005459	Miscanthus Rhizosphere	MQLIHIERVSATSDDERLGFLLAARAKAAEQVVAANVRAQASKVDLIEHITRRLQDGADRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGISQQSDFPEFQT*
Ga0070684_1002383592	3300005535	Corn Rhizosphere	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQASKVDLVEHVTRRLQAGEDRLRLRHRLLESGMPTSIVDAIMRAATDAACPDRPAGVTGGISQQDLPYGGA*
Ga0070684_1010203342	3300005535	Corn Rhizosphere	LLTARAKAAEQVVAANVRAQACKVDLIEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGISQQDLPYGGA*
Ga0070684_1013793902	3300005535	Corn Rhizosphere	MQLIHIERVSATSDDQRLGFLLTARAKAAEQVVAANVRAQACKTDLVEHITRRLQDGADRLRLRHRLLESGMPTSIGDAIMRAATDTACPDRPAGVTGGISQTDLPYGQS*
Ga0070684_1014807001	3300005535	Corn Rhizosphere	MDLIHIERITATSDDQRLGFLLTARAKAAEQVVAANVRAQASKTDLVEHITRRLQAGADRLRLRHRLLESGMPPSIVAAIMSAATDAACPDRPAGVTGGISQQEDLPYGAQGSGE*
Ga0068853_1021967211	3300005539	Corn Rhizosphere	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQASKVDLIEHVTRRLQAGADRLRLRHRLLESGMPPSIVAAIMSAATDAACPDRPAGVTGGISQQSDFPEFQT*
Ga0068859_1030112051	3300005617	Switchgrass Rhizosphere	MHLIYIERITATSDDERLGFLLTARAKAAEQVVAANVRAQASKVDLIEHVTRRLQAGADRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGISQQSDFPEFQR*
Ga0068870_110862531	3300005840	Miscanthus Rhizosphere	MDLIHIERITATSDDERLGFLLKARAKAAEQVVCANLRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDAACPD
Ga0097621_1000324454	3300006237	Miscanthus Rhizosphere	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGVSQQSDFPEFQT*
Ga0097621_1005051033	3300006237	Miscanthus Rhizosphere	MDLIHIERITATSDDQRLGFLLTARAKAAEQVVAANVRAQASKTDLVEHITRRLQDGADRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGISQQSDFPEFQT*
Ga0097621_1011833792	3300006237	Miscanthus Rhizosphere	MQLIHIERVSATSDDQRLGFLLTARAKAAEQVVAANVRAQAARQDIVEHLTRRLQAGEDRIRLRHRLLESGMPDSAVSTIMHAATDAVRPDRPAGVTGGISQQSDFPEFQT*
Ga0068871_1004320363	3300006358	Miscanthus Rhizosphere	MQLIHIERVSATSDDQRLGFLLAARAKAAEQVVAANVRAQAARQDIVEHLTRRLQAGEDRIRLRHRLLESGMPDSAVSTIMHAATDAVRPDRPAGVTGGISQQSDFPEFQT*
Ga0068865_1006829312	3300006881	Miscanthus Rhizosphere	MELIHIERITATSDDERLGFLLTARAKAAEQVVAANVRAQASKTDLVEHITRRLQDGADRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGISQQEDLPYGAQGSGE*
Ga0105243_102133812	3300009148	Miscanthus Rhizosphere	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGISQQSDFPEFQT*
Ga0105104_106032432	3300009168	Freshwater Sediment	MMQLIHVERTSATSDDERLGFLLTARAKAAEQVVAANVRAQASKVDLIEHVTRRLQDGADRLRLRHRLLESGMPTSIADAIMRAATDAVRPTRVTGGISQQSDLPYGQS*
Ga0105242_105557002	3300009176	Miscanthus Rhizosphere	MQLIHVERITATSDDERLGFLLTARAKAAEQVVAANVRAQASKTDLVEHITRRLQAGADRLRLRHRLLESGMPPSIVAAIMSAATDAVRPDRVTGGASQQTDFPEFQT*
Ga0105242_116378881	3300009176	Miscanthus Rhizosphere	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQASKVDLVEHITRRLQDGADRLRMRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGISQQSDFPEFQT*
Ga0105248_110797623	3300009177	Switchgrass Rhizosphere	MDLIHIERITATSDDERLGFLLKARAKAAEQVVCANLRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVT
Ga0105248_115753462	3300009177	Switchgrass Rhizosphere	MQLIHIERVSATSDDQRLGFLLTARAKAAEQVVAANVRAQASKVDLIEHVTRRLQAGADRLRLRHRLLESGMPPSIVAAIMSAATDAACPDRPAGVTGGVSQQDLPYGGA*
Ga0105237_108692351	3300009545	Corn Rhizosphere	MQLIHIERVSATSDDERLGFLLAARAKAAEQVVAANVRAQATKVDLIEHITRRLQDGADRLRLRHRLLESGMPPSIVAAIMSAATDAVRPDRVTGGASQQTDFPEFQT*
Ga0105238_100144341	3300009551	Corn Rhizosphere	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDAVRPTRVTGGISQQSDFPEFQT*
Ga0105249_113341802	3300009553	Switchgrass Rhizosphere	MQLIHIERVSATSDDERLGFLLAARAKAAEQVVAANVRAQASKTDLIEHIARRLQDGADRFRLRHRLLESGMPPSIVAAIMSAATDAVRPTRVTGSASQQSDLPYGGA*
Ga0105249_132597101	3300009553	Switchgrass Rhizosphere	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQASKVDLIEHITRRLQDGADRLRLRHRLLESGMPTSIADAIMRAATDAVRPDRPAGVTGGASQQSDLPYGGA*
Ga0105239_113786223	3300010375	Corn Rhizosphere	TDDERLGFLLTARAKAAEQVVAANVRAQASKVDLIEHITRRLQAGEDRLRLRHRLLESGMPPSIVAAIMSAATDAVRPDRPAGVTGGISQQSDFPEFQT*
Ga0137455_10312241	3300011429	Soil	DSRQVRHFAGGGLVHPHTQDVGAHLMQLIHIERVSATSDDQRLGFLLTARAKAAEQVVAANVRAQASKTDLVEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGISQQTDFPEFQR*
Ga0137437_12698061	3300011442	Soil	MQLIHIERVSATSDDQRLGFLLTARAKAAEQVVAANVRAQASKVDLIEHITRRIQDGADRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGISQQT
Ga0157304_10614893	3300012882	Soil	IERVSATSDDERLGFLLTARAKAAEQVVAANVRAQASKTDLVEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDAVRPDRPAGVTGGISQQSDFPEFQT*
Ga0157294_100095873	3300012892	Soil	MQLIHIERVSATSDDQRLGFLLTARAKAAEQVVAANVRAQASKVDLIEHVTRRLQDGADRLRLRHRLLESGMPPSIVAAIMGAATDAVRPDRVTGGASQQTDFPEFQT*
Ga0157299_102241601	3300012899	Soil	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQASKTDLIEHITRRIQDGADRIRLRHRLLESGMPDSAVSTIMHAATDAVRPTRVTGSASQQTDFPE
Ga0157292_101879992	3300012900	Soil	MQLIHIERVSATSDDERLGFLLAARAKAAEQVVAANVRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDTACPDRPAGVTGGASRQSDFPEFQR*
Ga0157288_100330761	3300012901	Soil	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQASKTDLVEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGANQQTDFPEFQR*
Ga0157289_100388741	3300012903	Soil	MGAYLMQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQACKVDLIEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGISQQDLPYGGA*
Ga0157289_101544812	3300012903	Soil	MMQLIHVERTSATSDDERLGFLLTARAKAAEQVVAANVRAQASKVDLIEHVTRRLQDGADRLRLRHRLLESGMPTSIADAIMRAATDAVRPDRPAGVTGGISQQSDFPEFQT*
Ga0157296_100433543	3300012905	Soil	MQLIHVERTSATTDEQRLGFLLTARAKAAEQVVAANVRAQACKIDLIEHVSRRLQDGADRIRLRHRLLESGMPGSIADAIMRAATDAVRPDRPA
Ga0157295_100328151	3300012906	Soil	ERVSATSDDQRLGFLLTARAKAAEQVVAANVRAQASKVDLIEHVTRRLQDGADRLRLRHRLLESGMPPSIVAAIMGAATDAVRPDRVTGGASQQTDFPEFQT*
Ga0157295_100748312	3300012906	Soil	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQASKTDLVEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDAVRPDRPAGVTGGISQQSDFPEFQT*
Ga0157302_101684721	3300012915	Soil	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANLRAQASKVDLIEHVTRRLQDGADRLRLRHRLLESGMPPSIVAAIMSAATDAVRPDRVTGGASQQTDFPEFQT*
Ga0157310_102578171	3300012916	Soil	MQLIHIERVSATSDEQRLGFLLKARAKAAEQVVAANLRAQASKVDLIEHVTRRLQAGADRLRLRHRLLESGMPPSIVAAIMGAATDAVRPTRVTGSASQQTDLPY
Ga0157310_102820231	3300012916	Soil	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQASKTDLVEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMSAATDAVRPDRPAGVTGGVSQQDLPYGGA*
Ga0157374_101624224	3300013296	Miscanthus Rhizosphere	MDLIHIERITATSDDERLGFLLTARAKAAEQVVAANVRAQASKTDLVEHITRRLQDGADRIRLRHRLLESGMPGSIADAIMRAAPDAVRPTRVAGGTNQQSDLPYGGA*
Ga0157374_106285162	3300013296	Miscanthus Rhizosphere	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAAILRSQMARQDLIEHVTRRLQAGANKFELRHTMLKSGMPRVAVLEILSAATDAVRPDRVTGGASQQTDFPEFQT*
Ga0157374_111488113	3300013296	Miscanthus Rhizosphere	RVSATSDDQRLGFLLTARAKAAEQVVAANVRAQACKTDLVEHITRRLQDGADRLRLRHRLLESGMPTSIGDAIMRAATDTACPDRPAGVTGGISQTDLPYGQS*
Ga0157378_102575352	3300013297	Miscanthus Rhizosphere	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQASKTDLVEHITRRLQDGADRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTG
Ga0163162_108807852	3300013306	Switchgrass Rhizosphere	MQLIHIERVSATSDDQRLGFLLMARAKAAEQVVAAILRAQAVRQDLVEHVTRRLQAGANKFELRHTMLKSGMPRVAVLEILSAATDAACPDRVTGGASQQTDFPEFQT*
Ga0157375_102531922	3300013308	Miscanthus Rhizosphere	MQLVHIEHVSAVSDDERLGFLLTARAKAAEQVVAANVRAQASKVDLIEHITRRIQDGADRLRLRHRLLESGMPPSIVAAIMSAATDAVRPARVTGGANQQTDFPEFQR*
Ga0163163_111275192	3300014325	Switchgrass Rhizosphere	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAAILRSQMARQDLIEHVTRRLQAGANKFELRHTMLKSGMPRGAVLEILSAATDAACPDRPAGVTGGVSQQSDFPEFQT*
Ga0157377_105693422	3300014745	Miscanthus Rhizosphere	MQLIHIERVSATSDDQRLGFLLTARAKAAEQVVAANVRAQACKVDLIEHVTRRLQAGEDRLRLRHRLLESGMPGSIADAIMRAATDAVRPTRVTGGASQQTDLPYGSP*
Ga0157377_106440022	3300014745	Miscanthus Rhizosphere	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQASKVDLIEHVTRRLQDGADRLRLRHRLLESGMPTSIADAIMRAATDAVRPDRVTGGANQQSDLPYGGA*
Ga0157379_108660722	3300014968	Switchgrass Rhizosphere	MQLVHIEHVSAVSDDERLGFLLTARAKAAEQVVAANVRAQASKVDLIEHVTRRLQAGADRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGISQQDLPYGGA*
Ga0157376_103288322	3300014969	Miscanthus Rhizosphere	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQACKVDLIEHVTRRLQDGADRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGVSQ
Ga0157376_103819263	3300014969	Miscanthus Rhizosphere	MQLIHIERVSATSDDERLGFLLAARAKAAEQVVAANVRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPGSIADAIMRAATDAVRPTRVTGGISQQSDLPYGQS*
Ga0157376_104927072	3300014969	Miscanthus Rhizosphere	MDLIHIERITATSDDQRLGFLLTARAKAAEQVVAANVRAQASKTDLVEHITRRLQAGDDRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGISQQDLPYGGA*
Ga0157376_116468471	3300014969	Miscanthus Rhizosphere	MDLIHIERTSATSDDQRLGFLLTARAKAAEQVVAAILRSQMARQDLIEHVTRRLQAGANKFELRHTMLKSGMPRGAVLEILSAADATCPDRPAGVTGGISQQSDFPEFQT*
Ga0157376_122264382	3300014969	Miscanthus Rhizosphere	MQLIHIERVSATSDDQRLGFLLAARAKAAEQVVAANVRAQAARQDIVEHLTRRLQAGEDRIRLRHRLLESGMPDSAVSTIMSAATDAGRPTRVAGGTNQQTDFPEFQT*
Ga0173480_101702942	3300015200	Soil	MQLIHIERVSATSDEQRLGFLLKARAKAAEQVVAANLRAQASKVDLIEHVTRRLQDGADRLRLRHRLLESGMPPSIVAAIMSAATDAVRPDRVTGGASQQTDFPEFQT*
Ga0173480_105587681	3300015200	Soil	DDERLGFLLTARAKAAEQVVAANVRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGISQQSDFPEFQT*
Ga0173480_107104661	3300015200	Soil	MQLIHVERITATSDDQRLGFLLTARAKAAEQVVAANVRAQASKTDLVEHITRRLQDGADRLRLRHRLLESGMPTSIGDAIMRAATDTACPDRPAGVTGGISQTDLPYGQS*
Ga0173480_111613251	3300015200	Soil	MQLIHIERVSATSDDQRLGFLLAARAKAAEQVVAANVRAQASKTDLIEHITRRIQDGADRLRLRHRLLESGMPPSIVAAIMSAATDAVRPARVTGGANQQTDFPEFQR*
Ga0173478_101777452	3300015201	Soil	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDAACPNRPAGVTGGISQQSDFPEFQR*
Ga0163161_109298492	3300017792	Switchgrass Rhizosphere	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQASKVDLIEHITRRLQDGADRLRLRHRLLESGMPTSIADAIMRAATDAVRPDRPAGVTGGASQQSDLPYGGA
Ga0163161_120930281	3300017792	Switchgrass Rhizosphere	SMELIHIERITATSDDQRLGFLLAARAKAAEQVVAANVRAQASKTDLVEHITRRLQDGADRIRLRHRLLESGMPTSIADAIMRAATDAPCPDRPAGVTGGISQQSDFPEFQT
Ga0184624_101139872	3300018073	Groundwater Sediment	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQACKTDLVEHITRRLQDGADRLRLRHRLLESGMPGSIADAIMRAATDAVRPTRVTGGISQQSDLPYGQS
Ga0184624_105120102	3300018073	Groundwater Sediment	MQLIHIERVSATSDDERLGFLLAARAKAAEQVVAANVRAQASKTDLIEHIARRLQDGADRLRLRHRLLESGMPTSIADAIMRAATDAVRPTRVTGSASQQEGLPYGQP
Ga0184628_1000089821	3300018083	Groundwater Sediment	MQLIHIERVSATSDDERLGFLLAARAKAAEQVVAANVRAQASKVDLIEHITRRIQDGADRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGTSQQSDFPEFQT
Ga0184628_100266582	3300018083	Groundwater Sediment	MQLVHIERVSAVSDDQRLGFLLTARAKAAEQVVCANLRAQACKIDLIEHVTRRLQEGEDRLRLRHRLLESGMPPSAVDAVMSAATYATRPTRVTGSASQQEELPYGRS
Ga0190274_100377873	3300018476	Soil	MQLIHIERITATSDDQRLGFLLTARAKAAEQVVAANVRAQASKTDLVEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDAVRPDRPAGVTGGISQQTDFPEFQR
Ga0173482_102366482	3300019361	Soil	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQACKTDLVEHITRRLQDGADRLRLRHRLLESGMPTSIGDAIMRAATDTACPDRPAGVTGGISQQSDFPEFQT
Ga0173479_100134651	3300019362	Soil	MQLIHIERVSATSDEQRLGFLLKARAKAAEQVVAAILRSQMARQDLIEHVTRRLQAGANKFELRHMMLKSGMPRGAVLEILGAATDAVRPDRVTGGASQQTDFPEFQT
Ga0173479_103553142	3300019362	Soil	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQASKTDLVEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGANQQTDFPEFQR
Ga0173479_107720481	3300019362	Soil	QRLGFLPTARAKAAEQVVAANVRAQASKVDLVEHITRRLQDGADRLRLRHRLLESGMPTSIADAIMRAATDAVRPDRPAGVTGGISQQSDFPEFQT
Ga0193703_10301742	3300019876	Soil	MGAHLMQLIHIERVSATSDDERLGFLLAARAKAAEQVVAANVRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPGSIADAIMRAATDAVRPTRVTGGISQQSDLPYGQS
Ga0193703_10344461	3300019876	Soil	DDERLGFLLAARAKAAEQVVAANVRAQASKVDLIEHITRRIQDGADRLRLRHRLLESGMPPSIVAAIMSAATDAVRPDRVTGGASQQTDLPYGGA
Ga0193696_10011521	3300020016	Soil	MQLIHVERITATSDDQRLGFLLTARAKAAEQVVAANVRAQASKTDLVEHITRRLQDGADRLRLRHRLLESGMPPSIVAAIMSAATDAACPDRPAGVTGGASQQSDFPEFQT
Ga0210380_101032582	3300021082	Groundwater Sediment	MQLVHIERVSAVSDDQRLGFLLTARAKAAEQVVCANLRAQACKIDLIEHVTRRLQEGEDRLRLRHRLLESGMPPSAVDAVMSAATYATRPTRVTGSASQQKDLPLGIA
Ga0210380_102736382	3300021082	Groundwater Sediment	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDTACPDRPAGVTGGISQQDLPEFQT
Ga0210380_103661052	3300021082	Groundwater Sediment	MQLVHIERVSAVSDGQRLGFLLTARAKAAEQVVCANLRAHACKIDLIEHVTRRLQEGEDRLRLRHRLLESGMPPSAVDAVMSAATYATRPTRVTGSA
Ga0222621_10917181	3300021510	Groundwater Sediment	DDQRLGFLLTARAKAAEQVVAANVRAQASKTDLVEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDAVRPDRPAGVTGGISQQTDFPEFQR
Ga0222622_100781852	3300022756	Groundwater Sediment	MQLIHVERITATSDDQRLGFLLTARAKAAEQVVAANVRAQASKTDLVEHITRRLQDGADRLRLRHRLLESGMPPSIVAAIMSAATDAVRPTRVTGGASQQTDLPYGAQGSGE
Ga0247786_11181021	3300022883	Soil	MGAHMMQLIHVERTSATSDDERLGFLLTARAKAAEQVVAANVRAQASKVDLIEHVTRRLQDGADRLRLRHRLLESGMPTSIADAIMRAATDAVRPDRPAGVTGGISQQSDFPEFQT
Ga0247802_10089422	3300023077	Soil	MQLIHIERVSATSDDERLGFLLAARAKAAEQVVAANLRAQASKVDLIEHVTRRLQDGADRLRLRHRLLESGMPPSIVAAIMSAATDAVRPDRVTGGASQQTDFPEFQT
Ga0207697_100408062	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MDLIHIERITATSDDERLGFLLKARAKAAEQVVCANLRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGISQQDLPYGQS
Ga0207643_106618882	3300025908	Miscanthus Rhizosphere	MDLIHIERITATSDDERLGFLLKARAKAAEQVVCANLRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGISQQDLPYGGA
Ga0207650_105576411	3300025925	Switchgrass Rhizosphere	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQASKVDLIEHVTRRLQDGADRLRLRHRLLESGMPPSIVAAIMSAATDAVRPTRVAGGTNQQSDLPYGGA
Ga0207659_108497702	3300025926	Miscanthus Rhizosphere	MDLIHIERITATSDDERLGFLLTARAKAAEQVVAANVRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPPSIVAAIMGAATDAVRPTRVTGSASQQTDLPYGGA
Ga0207659_109528182	3300025926	Miscanthus Rhizosphere	MQLIHIERVSATSDDQRLGFLLTARAKAAEQVVCANLRAQACKIDLIEHITRRLQAGADRLRLRHRLLESGMPTSIGDAIMRAATDTACPDRPAGVTGGISQTDLPYGQS
Ga0207659_112019921	3300025926	Miscanthus Rhizosphere	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAAILRSQMARQDLIEHVTRRLQAGANKFELRHTMLKSGMPRVAVLEILSAATDAACPDRVTGGASQQTDFPEFQT
Ga0207687_100164464	3300025927	Miscanthus Rhizosphere	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDTACPDRPAGVTGGASQQSDFPEFQT
Ga0207687_104996093	3300025927	Miscanthus Rhizosphere	MDLIHIERITATSDDQRLGFLLTARAKAAEQVVAANVRAQASKTDLVEHITRRLQAGADRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGISQQSDFPEFQT
Ga0207701_100210634	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MDLIHIERITATSDDQRLGFLLTARAKAAEQVVAANVRAQASKTDLVEHITRRLQAGADRLRLRHRLLESGMPPSIVAAIMSAATDAACPDRPAGVTGGISQQDLPYGGA
Ga0207701_101748333	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQACKVDLIEHITRRIQDGADRLRLRHRLLESGMPPSIVAAIMNAATDAVRPTRVTGSASQQTDLPYGQS
Ga0207701_105113202	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MQLIHIERVSATSDEQRLGFLLAARAKAAEQVVAANVRAQASKVDLIEHITRRIQDGADRVRLRHRLLESGMPPSIVAAIMSAATDAVRPDRVTGGASQQTDLPYGGA
Ga0207706_100770443	3300025933	Corn Rhizosphere	MQLIHIERVSATSDDQRLGFLLTARAKAAEQVVCANLRAHACKIDLIEHITRRIQDGADRVRLRHRLLESGMPPSIVAAIMSAATDAVRPARVTGGANQQTDFPEFQR
Ga0207709_118465881	3300025935	Miscanthus Rhizosphere	MDLIHIERITATSDDQRLGFLLTARAKAAEQVVAANVRAQASKTDLVEHITRRLQAGADRLRLRHRLLESGMPPSIVAAIMSAATDAAC
Ga0207669_103637332	3300025937	Miscanthus Rhizosphere	MQLVHIEHVSAVSDDERLGFLLTARAKAAEQVVAANVRAQASKVDLIEHITRRIQDGADRLRLRHRLLESGMPPSIVAAIMSAATDAVRPARVTGGANQQTDFPEFQR
Ga0207669_104984221	3300025937	Miscanthus Rhizosphere	MQLIHIERVSATSDDQRLGFLLTARAKAAEQVVCANLRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDTACPDRPAGVTGSANQQTDLPYGGA
Ga0207704_108759341	3300025938	Miscanthus Rhizosphere	MELIHIERITATSDDERLGFLLTARAKAAEQVVAANVRAQASKTDLVEHITRRLQDGADRLRLRHRLLESGMPTSIADAIMRAATDAAC
Ga0207661_104119422	3300025944	Corn Rhizosphere	MDLIHIERITATSDDQRLGFLLTARAKAAEQVVAANVRAQASKTDLVEHITRRLQAGADRLRLRHRLLESGMPPSIVAAIMSAATDAACPDRPAGVTGGISQQEDLPYGAQGSGE
Ga0207661_110117892	3300025944	Corn Rhizosphere	MQLIHVERITATSDDERLGFLLTARAKAAEQVVAANVRAQASKIDLIEHITRRLQDGADRLRLRHRLLESGMPGSIADAIMRAATDAVRPTRVTGSANQQSDFPEFQT
Ga0207661_110681531	3300025944	Corn Rhizosphere	ECLEHPHPQNVEAYLMQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGISQQDLPYGQS
Ga0207651_101595542	3300025960	Switchgrass Rhizosphere	MQLIHIERVSATSDDQRLGFLLTARAKAAEQVVCANLRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGISQQDLPYGGA
Ga0207651_107152233	3300025960	Switchgrass Rhizosphere	MDLIHIERITATSDDQRLGFLLTARAKAAEQVVAANVRAQASKTDLVEHITRRLQDGADRLRLRHRLLESGMPPSIVAAIMSAATDAACPDRPAGVTGGVSQQDLPYGGA
Ga0207712_113008032	3300025961	Switchgrass Rhizosphere	QLIHIERVSATSDDERLGFLLAARAKAAEQVVAANVRAQASKTDLIEHIARRLQDGADRFRLRHRLLESGMPPSIVAAIMSAATDAVRPTRVTGSASQQSDLPYGGA
Ga0207678_104028383	3300026067	Corn Rhizosphere	MQLIHIERVSATSDDERRGFLLTARAKAAEQVVAANVRAQACKVDLIEHITRRIQDGADRLRLRHRLLESGMPPSIVAAIMNAATDAVRPTRVTGSASQQTDLPYGQS
Ga0207648_105979643	3300026089	Miscanthus Rhizosphere	MQLIHIERVSATSDDERLGFLLAARAKAAEQVVAANVRAQASKVDLIEHITRRLQDGADRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGISQQSDFPEFQT
Ga0207683_101783043	3300026121	Miscanthus Rhizosphere	VSDDQRLGFLLTARAKAAEQVVAANVRAQACKVDLIEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRDATDAACPDRPAGVTGGISQQSDFPEFQT
Ga0207683_114016201	3300026121	Miscanthus Rhizosphere	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQASKTDLIEHITRRIQDGADRLRLRHRLLESGMPTSIADAIMRAATDAVRPDR
Ga0207698_124648403	3300026142	Corn Rhizosphere	LLTARAKAAEQVVCANLRAQACKIDLIEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDTACPDRPAGVTGGASQQSDFPEFQT
Ga0307285_100003994	3300028712	Soil	MQLIHIERVSATSDDERLGFLLAARAKAAEQVVAANVRAQASKVDLIEHITRRIQDGADRLRLRHRLLESGMPPSIVAAIMSAATDAVRPDRVTGGASQQTDFPEFQT
Ga0307285_100041724	3300028712	Soil	MQLIHIERITATSDDQRLGFLLTARAKAAEQVVAANVRAQASKTDLVEHVTRRLQVGEDRLRLRHRLLESGMPTSIADAIMRAATDAVRPDRPAGVTGGISQQTDFPEFQR
Ga0307285_100215442	3300028712	Soil	MQLVHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQAARHDILEHITRRLQAGEDRIKLRHRLLESGMPDSAASTIMQAATEAVRPTRVTGGASQQSDLPYGQS
Ga0307297_100561194	3300028754	Soil	RHFAGGGLVHPHTQDVGAHLMQLIHIERITATSDDQRLGFLLTARAKAAEQVVAANVRAQASKTDLVEHVTRRLQAGEDRLRLRHRLLESGMPTSIADAIMRAATDAVRPDRPAGVTGGISQQTDFPEFQR
Ga0307283_100643702	3300028790	Soil	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQASKVDLVEHITRRLQDGADRLRLRHRLLESGMPTSIADAIMRAATDAACPDRPAGVTGGISQQSDFPEFQT
Ga0310813_105687552	3300031716	Soil	MQLIHIERVSATSDDERLGFLLTARAKAAEQVVAANVRAQASKVDLVEHVTRRLQAGEDRLRLRHRLLESGMPTSIVDAIMRAATDAACPNRPAGVTGGISQQSDFPEFQR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F052002

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences