Metagenome / Metatranscriptome Family F051974

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051974
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	42 residues
Representative Sequence	MFINNQGNYLNKSDTDVELEILFIASPIRPEIGKTSIFLT
Number of Associated Samples	108
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	82.73 %
% of genes near scaffold ends (potentially truncated)	94.41 %
% of genes from short scaffolds (< 2000 bps)	90.91 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (72.028 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (47.552 % of family members)
Environment Ontology (ENVO)	Unclassified (79.720 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (86.713 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.88% β-sheet: 0.00% Coil/Unstructured: 69.12%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF14693	Ribosomal_TL5_C	70.63
PF01386	Ribosomal_L25p	11.89
PF01195	Pept_tRNA_hydro	6.99
PF01926	MMR_HSR1	2.80
PF06071	YchF-GTPase_C	2.10
PF00032	Cytochrom_B_C	0.70
PF01336	tRNA_anti-codon	0.70
PF14572	Pribosyl_synth	0.70
PF10399	UCR_Fe-S_N	0.70
PF01218	Coprogen_oxidas	0.70
PF02636	Methyltransf_28	0.70
PF00216	Bac_DNA_binding	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG1825	Ribosomal protein L25 (general stress protein Ctc)	Translation, ribosomal structure and biogenesis [J]	11.89
COG0193	Peptidyl-tRNA hydrolase	Translation, ribosomal structure and biogenesis [J]	6.99
COG0012	Ribosome-binding ATPase YchF, GTP1/OBG family	Translation, ribosomal structure and biogenesis [J]	2.10
COG0408	Coproporphyrinogen-III oxidase HemH, oxygen-dependent	Coenzyme transport and metabolism [H]	0.70
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.70
COG1290	Cytochrome b subunit of the bc complex	Energy production and conversion [C]	0.70
COG1565	SAM-dependent methyltransferase, MidA family	General function prediction only [R]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.03 %
All Organisms	root	All Organisms	27.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.03 %
cellular organisms	root	All Organisms → cellular organisms	27.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.03 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	27.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.03 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.48 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.70 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.03 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	23.78 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.70 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.03 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	21.68 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.70 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.03 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	21.68 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.70 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.03 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	20.98 %
Prochlorococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae	0.70 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.03 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	10.49 %
unclassified Candidatus Pelagibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter	1.40 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.70 %
Prochlorococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.03 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	10.49 %
Candidatus Pelagibacter sp. TMED275	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED275	1.40 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.70 %
Prochlorococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001346\|JGI20151J14362_10155687	Not Available	678	Open in IMG/M
3300001354\|JGI20155J14468_10001517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	18090	Open in IMG/M
3300001354\|JGI20155J14468_10051648	All Organisms → cellular organisms → Bacteria	1738	Open in IMG/M
3300001945\|GOS2241_1002003	All Organisms → cellular organisms → Bacteria	1656	Open in IMG/M
3300001973\|GOS2217_10154928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3766	Open in IMG/M
3300002033\|GOS24894_10047785	Not Available	1013	Open in IMG/M
3300003476\|NAP2_1029110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1099	Open in IMG/M
3300003476\|NAP2_1062853	Not Available	783	Open in IMG/M
3300003477\|nap3_10181232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	517	Open in IMG/M
3300005522\|Ga0066861_10037331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1739	Open in IMG/M
3300005523\|Ga0066865_10249212	Not Available	669	Open in IMG/M
3300005605\|Ga0066850_10327793	Not Available	537	Open in IMG/M
3300005606\|Ga0066835_10271224	Not Available	584	Open in IMG/M
3300006309\|Ga0068479_1100739	Not Available	600	Open in IMG/M
3300006316\|Ga0068473_1263924	Not Available	762	Open in IMG/M
3300006331\|Ga0068488_1363172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED275	772	Open in IMG/M
3300006334\|Ga0099675_1464522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus	517	Open in IMG/M
3300006337\|Ga0068495_1483266	Not Available	689	Open in IMG/M
3300006350\|Ga0099954_1039906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1106	Open in IMG/M
3300006351\|Ga0099953_1189328	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
3300006921\|Ga0098060_1032891	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1573	Open in IMG/M
3300008097\|Ga0111541_10220238	Not Available	799	Open in IMG/M
3300009071\|Ga0115566_10287885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	973	Open in IMG/M
3300009481\|Ga0114932_10556911	Not Available	672	Open in IMG/M
3300011326\|Ga0138403_1014354	Not Available	533	Open in IMG/M
3300011330\|Ga0138383_1174537	Not Available	862	Open in IMG/M
3300012919\|Ga0160422_10670008	Not Available	661	Open in IMG/M
3300012919\|Ga0160422_10799976	Not Available	605	Open in IMG/M
3300012928\|Ga0163110_11377318	Not Available	570	Open in IMG/M
3300012936\|Ga0163109_11297359	Not Available	531	Open in IMG/M
3300012954\|Ga0163111_10187383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1778	Open in IMG/M
3300012954\|Ga0163111_10927653	Not Available	837	Open in IMG/M
3300012954\|Ga0163111_11465987	Not Available	674	Open in IMG/M
3300012954\|Ga0163111_11556603	Not Available	656	Open in IMG/M
3300017762\|Ga0181422_1251627	Not Available	523	Open in IMG/M
3300017770\|Ga0187217_1205546	Not Available	650	Open in IMG/M
3300017781\|Ga0181423_1042744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1821	Open in IMG/M
3300017783\|Ga0181379_1099155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1068	Open in IMG/M
3300017950\|Ga0181607_10487739	Not Available	660	Open in IMG/M
3300017969\|Ga0181585_10693405	Not Available	666	Open in IMG/M
3300017985\|Ga0181576_10855687	Not Available	535	Open in IMG/M
3300018417\|Ga0181558_10665442	Not Available	532	Open in IMG/M
3300018423\|Ga0181593_10587708	All Organisms → cellular organisms → Bacteria → Proteobacteria	803	Open in IMG/M
3300018428\|Ga0181568_11119795	Not Available	594	Open in IMG/M
3300018428\|Ga0181568_11482045	Not Available	500	Open in IMG/M
3300020055\|Ga0181575_10271591	Not Available	971	Open in IMG/M
3300020194\|Ga0181597_10019780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	5047	Open in IMG/M
3300020239\|Ga0211501_1112041	Not Available	544	Open in IMG/M
3300020240\|Ga0211494_1078718	Not Available	643	Open in IMG/M
3300020250\|Ga0211627_1064866	Not Available	578	Open in IMG/M
3300020264\|Ga0211526_1096966	Not Available	502	Open in IMG/M
3300020282\|Ga0211667_1155934	Not Available	543	Open in IMG/M
3300020319\|Ga0211517_1068865	Not Available	690	Open in IMG/M
3300020320\|Ga0211597_1004309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	3814	Open in IMG/M
3300020347\|Ga0211504_1147721	Not Available	512	Open in IMG/M
3300020368\|Ga0211674_10140680	Not Available	624	Open in IMG/M
3300020368\|Ga0211674_10164333	Not Available	571	Open in IMG/M
3300020378\|Ga0211527_10128078	Not Available	732	Open in IMG/M
3300020379\|Ga0211652_10126803	Not Available	774	Open in IMG/M
3300020385\|Ga0211677_10245909	Not Available	728	Open in IMG/M
3300020388\|Ga0211678_10039428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2284	Open in IMG/M
3300020388\|Ga0211678_10343602	Not Available	601	Open in IMG/M
3300020391\|Ga0211675_10030572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2705	Open in IMG/M
3300020391\|Ga0211675_10277184	Not Available	714	Open in IMG/M
3300020395\|Ga0211705_10179192	Not Available	777	Open in IMG/M
3300020400\|Ga0211636_10082553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1317	Open in IMG/M
3300020400\|Ga0211636_10096330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1201	Open in IMG/M
3300020400\|Ga0211636_10202233	Not Available	772	Open in IMG/M
3300020401\|Ga0211617_10150889	Not Available	969	Open in IMG/M
3300020404\|Ga0211659_10201758	Not Available	892	Open in IMG/M
3300020404\|Ga0211659_10509314	Not Available	513	Open in IMG/M
3300020405\|Ga0211496_10380306	Not Available	526	Open in IMG/M
3300020409\|Ga0211472_10164476	Not Available	887	Open in IMG/M
3300020413\|Ga0211516_10365821	Not Available	642	Open in IMG/M
3300020414\|Ga0211523_10251600	Not Available	728	Open in IMG/M
3300020414\|Ga0211523_10358477	Not Available	593	Open in IMG/M
3300020414\|Ga0211523_10402455	Not Available	553	Open in IMG/M
3300020417\|Ga0211528_10248536	Not Available	673	Open in IMG/M
3300020417\|Ga0211528_10352962	Not Available	546	Open in IMG/M
3300020418\|Ga0211557_10405631	Not Available	605	Open in IMG/M
3300020420\|Ga0211580_10049371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1795	Open in IMG/M
3300020424\|Ga0211620_10362410	Not Available	616	Open in IMG/M
3300020429\|Ga0211581_10138387	Not Available	984	Open in IMG/M
3300020429\|Ga0211581_10455548	Not Available	522	Open in IMG/M
3300020431\|Ga0211554_10321349	Not Available	725	Open in IMG/M
3300020432\|Ga0211556_10425697	Not Available	589	Open in IMG/M
3300020432\|Ga0211556_10444695	Not Available	574	Open in IMG/M
3300020433\|Ga0211565_10239413	Not Available	790	Open in IMG/M
3300020437\|Ga0211539_10288507	Not Available	679	Open in IMG/M
3300020440\|Ga0211518_10063769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2055	Open in IMG/M
3300020440\|Ga0211518_10101117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1525	Open in IMG/M
3300020441\|Ga0211695_10321616	Not Available	573	Open in IMG/M
3300020441\|Ga0211695_10423724	Not Available	507	Open in IMG/M
3300020442\|Ga0211559_10553613	Not Available	522	Open in IMG/M
3300020446\|Ga0211574_10091804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1338	Open in IMG/M
3300020446\|Ga0211574_10140806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1054	Open in IMG/M
3300020447\|Ga0211691_10191029	Not Available	787	Open in IMG/M
3300020448\|Ga0211638_10068841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1558	Open in IMG/M
3300020450\|Ga0211641_10400201	Not Available	662	Open in IMG/M
3300020450\|Ga0211641_10437334	Not Available	628	Open in IMG/M
3300020454\|Ga0211548_10402520	Not Available	670	Open in IMG/M
3300020459\|Ga0211514_10612372	Not Available	532	Open in IMG/M
3300020460\|Ga0211486_10198307	Not Available	877	Open in IMG/M
3300020463\|Ga0211676_10095929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1964	Open in IMG/M
3300020463\|Ga0211676_10259189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1014	Open in IMG/M
3300020463\|Ga0211676_10368329	Not Available	796	Open in IMG/M
3300020463\|Ga0211676_10411095	Not Available	737	Open in IMG/M
3300020466\|Ga0211714_10115425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1320	Open in IMG/M
3300020467\|Ga0211713_10515447	Not Available	582	Open in IMG/M
3300020469\|Ga0211577_10536423	Not Available	704	Open in IMG/M
3300020472\|Ga0211579_10695123	Not Available	567	Open in IMG/M
3300020474\|Ga0211547_10179448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1091	Open in IMG/M
3300020810\|Ga0181598_1306515	Not Available	562	Open in IMG/M
3300021364\|Ga0213859_10299477	Not Available	727	Open in IMG/M
(restricted) 3300024324\|Ga0233443_1316260	Not Available	514	Open in IMG/M
3300026083\|Ga0208878_1063300	Not Available	939	Open in IMG/M
3300026256\|Ga0208639_1030731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1651	Open in IMG/M
3300026266\|Ga0208410_1002546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	8485	Open in IMG/M
3300026266\|Ga0208410_1067722	Not Available	949	Open in IMG/M
3300026269\|Ga0208766_1019217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2560	Open in IMG/M
3300026270\|Ga0207993_1189054	Not Available	523	Open in IMG/M
3300027830\|Ga0209359_10304414	Not Available	729	Open in IMG/M
3300027859\|Ga0209503_10467382	Not Available	625	Open in IMG/M
3300031774\|Ga0315331_10788243	Not Available	664	Open in IMG/M
3300031775\|Ga0315326_10800543	Not Available	587	Open in IMG/M
3300031785\|Ga0310343_10228175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1288	Open in IMG/M
3300031785\|Ga0310343_10381576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1017	Open in IMG/M
3300031886\|Ga0315318_10773446	Not Available	536	Open in IMG/M
3300032006\|Ga0310344_10487810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1057	Open in IMG/M
3300032006\|Ga0310344_11391967	Not Available	576	Open in IMG/M
3300032011\|Ga0315316_10729302	Not Available	821	Open in IMG/M
3300032011\|Ga0315316_10799170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED275	778	Open in IMG/M
3300032011\|Ga0315316_11265232	Not Available	590	Open in IMG/M
3300032047\|Ga0315330_10483935	Not Available	750	Open in IMG/M
3300032047\|Ga0315330_10591930	Not Available	659	Open in IMG/M
3300032073\|Ga0315315_10877842	Not Available	812	Open in IMG/M
3300032073\|Ga0315315_11119417	Not Available	700	Open in IMG/M
3300032073\|Ga0315315_11527667	Not Available	578	Open in IMG/M
3300032278\|Ga0310345_11842470	Not Available	589	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified	48.25%
Oceanic	Environmental → Aquatic → Marine → Oceanic	27.27%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	14.69%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	4.20%
Strait	Environmental → Aquatic → Marine → Strait	2.80%
Inlet	Environmental → Aquatic → Marine → Inlet	0.70%
Coastal	Environmental → Aquatic → Marine → Coastal	0.70%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.70%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	48.25%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	16.08%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	9.09%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	7.69%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	6.99%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	4.20%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	2.80%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	2.10%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.70%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.70%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.70%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	47.55%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	12.59%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	7.69%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	6.99%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	4.20%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	3.50%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	3.50%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	2.80%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	2.10%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	2.10%
Estuarine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Estuarine	2.10%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	1.40%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.70%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.70%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.70%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	0.70%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001346	Pelagic Microbial community sample from North Sea - COGITO 998_met_01	Environmental	Open in IMG/M
3300001354	Pelagic Microbial community sample from North Sea - COGITO 998_met_05	Environmental	Open in IMG/M
3300001945	Marine microbial communities from Galapagos, Equador - GS026	Environmental	Open in IMG/M
3300001973	Marine microbial communities from Bermuda, Atlantic Ocean - GS001	Environmental	Open in IMG/M
3300002033	Marine microbial communities from the Sargasso Sea - GS000a &b	Environmental	Open in IMG/M
3300003476	Estuarine microbial communities from the Sarno estuary, Gulf of Naples, Italy - Sample Station 2	Environmental	Open in IMG/M
3300003477	Estuarine microbial communities from the Sarno estuary, Gulf of Naples, Italy - Sample Station 3	Environmental	Open in IMG/M
3300005522	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV257	Environmental	Open in IMG/M
3300005523	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV265	Environmental	Open in IMG/M
3300005605	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67	Environmental	Open in IMG/M
3300005606	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV84	Environmental	Open in IMG/M
3300006309	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0500m	Environmental	Open in IMG/M
3300006313	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0770m	Environmental	Open in IMG/M
3300006316	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_1000m	Environmental	Open in IMG/M
3300006331	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_1000m	Environmental	Open in IMG/M
3300006334	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0025m	Environmental	Open in IMG/M
3300006337	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT237_3_0025m	Environmental	Open in IMG/M
3300006350	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0075m	Environmental	Open in IMG/M
3300006351	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0045m	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300008097	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_DCM_ad_131m_LV_B (version 2)	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300011326	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S21 Surf_B metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011330	Marine microbial communities from the Southern Atlantic ocean - KN S17 Surf_A metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012919	Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaG	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300012936	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300017762	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18	Environmental	Open in IMG/M
3300017770	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300017783	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017985	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018417	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018423	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020055	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101411CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020194	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041403US metaG (spades assembly)	Environmental	Open in IMG/M
3300020239	Marine microbial communities from Tara Oceans - TARA_B100000003 (ERX555909-ERR598959)	Environmental	Open in IMG/M
3300020240	Marine microbial communities from Tara Oceans - TARA_B000000477 (ERX556046-ERR598982)	Environmental	Open in IMG/M
3300020250	Marine microbial communities from Tara Oceans - TARA_B100000475 (ERX555986-ERR599129)	Environmental	Open in IMG/M
3300020264	Marine microbial communities from Tara Oceans - TARA_B100000066 (ERX556116-ERR599158)	Environmental	Open in IMG/M
3300020282	Marine microbial communities from Tara Oceans - TARA_B100000963 (ERX556074-ERR599169)	Environmental	Open in IMG/M
3300020319	Marine microbial communities from Tara Oceans - TARA_S200000501 (ERX556039-ERR599073)	Environmental	Open in IMG/M
3300020320	Marine microbial communities from Tara Oceans - TARA_B000000441 (ERX556072-ERR598990)	Environmental	Open in IMG/M
3300020347	Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556109-ERR598994)	Environmental	Open in IMG/M
3300020368	Marine microbial communities from Tara Oceans - TARA_B100001027 (ERX556049-ERR599093)	Environmental	Open in IMG/M
3300020378	Marine microbial communities from Tara Oceans - TARA_B100000066 (ERX556006-ERR599102)	Environmental	Open in IMG/M
3300020379	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556001-ERR599168)	Environmental	Open in IMG/M
3300020385	Marine microbial communities from Tara Oceans - TARA_B100001059 (ERX556045-ERR598965)	Environmental	Open in IMG/M
3300020388	Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064)	Environmental	Open in IMG/M
3300020391	Marine microbial communities from Tara Oceans - TARA_B100000989 (ERX556130-ERR598967)	Environmental	Open in IMG/M
3300020395	Marine microbial communities from Tara Oceans - TARA_B100000427 (ERX555987-ERR599133)	Environmental	Open in IMG/M
3300020400	Marine microbial communities from Tara Oceans - TARA_B100001115 (ERX555947-ERR598992)	Environmental	Open in IMG/M
3300020401	Marine microbial communities from Tara Oceans - TARA_B100000212 (ERX555985-ERR599139)	Environmental	Open in IMG/M
3300020404	Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978)	Environmental	Open in IMG/M
3300020405	Marine microbial communities from Tara Oceans - TARA_B000000532 (ERX556129-ERR599012)	Environmental	Open in IMG/M
3300020409	Marine microbial communities from Tara Oceans - TARA_A100001403 (ERX555912-ERR599106)	Environmental	Open in IMG/M
3300020413	Marine microbial communities from Tara Oceans - TARA_S200000501 (ERX555962-ERR599092)	Environmental	Open in IMG/M
3300020414	Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556019-ERR599028)	Environmental	Open in IMG/M
3300020417	Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556034-ERR599082)	Environmental	Open in IMG/M
3300020418	Marine microbial communities from Tara Oceans - TARA_B100002051 (ERX556028-ERR599136)	Environmental	Open in IMG/M
3300020420	Marine microbial communities from Tara Oceans - TARA_B100001248 (ERX556094-ERR599142)	Environmental	Open in IMG/M
3300020424	Marine microbial communities from Tara Oceans - TARA_B100000242 (ERX556056-ERR599138)	Environmental	Open in IMG/M
3300020429	Marine microbial communities from Tara Oceans - TARA_B100000614 (ERX556134-ERR599032)	Environmental	Open in IMG/M
3300020431	Marine microbial communities from Tara Oceans - TARA_B100001142 (ERX556101-ERR598983)	Environmental	Open in IMG/M
3300020432	Marine microbial communities from Tara Oceans - TARA_B100002052 (ERX556103-ERR599100)	Environmental	Open in IMG/M
3300020433	Marine microbial communities from Tara Oceans - TARA_B100001989 (ERX556106-ERR599030)	Environmental	Open in IMG/M
3300020437	Marine microbial communities from Tara Oceans - TARA_B100000282 (ERX555906-ERR599074)	Environmental	Open in IMG/M
3300020440	Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX555952-ERR599043)	Environmental	Open in IMG/M
3300020441	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_078 - TARA_B100000524 (ERX556088-ERR599006)	Environmental	Open in IMG/M
3300020442	Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)	Environmental	Open in IMG/M
3300020446	Marine microbial communities from Tara Oceans - TARA_B100001287 (ERX556031-ERR598989)	Environmental	Open in IMG/M
3300020447	Marine microbial communities from Tara Oceans - TARA_B100000745 (ERX556090-ERR599159)	Environmental	Open in IMG/M
3300020448	Marine microbial communities from Tara Oceans - TARA_B100000941 (ERX555919-ERR598954)	Environmental	Open in IMG/M
3300020450	Marine microbial communities from Tara Oceans - TARA_B100000575 (ERX555933-ERR599077)	Environmental	Open in IMG/M
3300020454	Marine microbial communities from Tara Oceans - TARA_B100001769 (ERX556037-ERR599170)	Environmental	Open in IMG/M
3300020459	Marine microbial communities from Tara Oceans - TARA_X000000368 (ERX555913-ERR599095)	Environmental	Open in IMG/M
3300020460	Marine microbial communities from Tara Oceans - TARA_A100001037 (ERX555931-ERR599097)	Environmental	Open in IMG/M
3300020463	Marine microbial communities from Tara Oceans - TARA_B100001057 (ERX555988-ERR599050)	Environmental	Open in IMG/M
3300020466	Marine microbial communities from Tara Oceans - TARA_B100001540 (ERX556059-ERR598968)	Environmental	Open in IMG/M
3300020467	Marine microbial communities from Tara Oceans - TARA_B100000945 (ERX555966-ERR598957)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300020472	Marine microbial communities from Tara Oceans - TARA_B100001250 (ERX556017-ERR598995)	Environmental	Open in IMG/M
3300020474	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)	Environmental	Open in IMG/M
3300020810	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041404US metaG (spades assembly)	Environmental	Open in IMG/M
3300021364	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304	Environmental	Open in IMG/M
3300024324 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_200_MG	Environmental	Open in IMG/M
3300026083	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_SurfaceA_ad_5m_LV_A (SPAdes)	Environmental	Open in IMG/M
3300026256	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV76 (SPAdes)	Environmental	Open in IMG/M
3300026266	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV257 (SPAdes)	Environmental	Open in IMG/M
3300026269	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263 (SPAdes)	Environmental	Open in IMG/M
3300026270	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV265 (SPAdes)	Environmental	Open in IMG/M
3300027830	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Surface_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027859	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300031644	Marine microbial communities from water near the shore, Antarctic Ocean - #5	Environmental	Open in IMG/M
3300031774	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915	Environmental	Open in IMG/M
3300031775	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315	Environmental	Open in IMG/M
3300031785	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-25_MG	Environmental	Open in IMG/M
3300031886	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416	Environmental	Open in IMG/M
3300032006	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MG	Environmental	Open in IMG/M
3300032011	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416	Environmental	Open in IMG/M
3300032047	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 34915	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20151J14362_101556871	3300001346	Pelagic Marine	MITNNQGNYLNKSDTEVEFEILFIASPIRPEIGKTSMFLTFLILF
JGI20155J14468_1000151717	3300001354	Pelagic Marine	MSFSSSYIITQDNYLNKSDTDVELEILFIASPIRPEIGKTSIFLALLILS*
JGI20155J14468_100516485	3300001354	Pelagic Marine	MFVNNQGNYLNKSDTEVELDILLIASPIKAEIGKTS
GOS2241_10020031	3300001945	Marine	MFINNQGNYLNKSETDVELEILLIASPIRAEIGKTSMFLTFFVFSLL
GOS2217_101549281	3300001973	Marine	MFINNQEIYLNKSDTDVEFEILFIASPIRPDMGKTSIFLTFLV
GOS24894_100477853	3300002033	Marine	MFINNQGNYLNKSETEVEFDILFIASPIRPEIGKTSIFLTFFVFSTIIRLCQ
NAP2_10291103	3300003476	Estuarine	MFINNQGNYLNKSDTDVELDILLIASPISPEIGKTSIFLTF
NAP2_10628532	3300003476	Estuarine	MIINNQGIYLNKSDTDVEFEILFIASPIRPDIGKTSIFLTFLV
nap3_101812322	3300003477	Estuarine	MLINNQGNYLNKSDTDVEFDILFIASPIRPDIGKTSIFLTFFVF*
Ga0066861_100373311	3300005522	Marine	MLINNQGIYLNKSETEVELEILFIASPIRPEIGKTSIFL
Ga0066865_102492122	3300005523	Marine	MQINNQGNYLNKSDTDVEFEILLIASPIRPEIGKTSIFLTFLVL
Ga0066850_103277931	3300005605	Marine	MLFITQENYLNKSDTDVELEILFIASPIKLETVKTSIFLALLTLI
Ga0066835_102712241	3300005606	Marine	MLINNQGIYLNKSDTDVEFEILFIASPIRPDIGKTSIFLTFLVL
Ga0068479_11007391	3300006309	Marine	MLFITQENYLNKSDTDVELEILFIASPIKLEIVKTSI
Ga0068472_1015528215	3300006313	Marine	LITQENYLNKSETDVEFEILLIASPIKFDTVRTSIF*
Ga0068473_12639241	3300006316	Marine	MLFITQENYLNKSDTDVELEILFIASPIKLEIVKISIFLALLTLI*LS
Ga0068488_13631722	3300006331	Marine	MLFITQENYLNKSDTDVELEILFIASPIKLEIVKISIFLAL
Ga0099675_14645222	3300006334	Marine	MFINNQGNYLNKSDTEVELDILLIASPMRLEIGKTSIFLTFLAYCGNIF*
Ga0068495_14832662	3300006337	Marine	MLTNNQGIYLNKSDTDVEFEILFIASPIRPDIGKTSMFL
Ga0099954_10399061	3300006350	Marine	MFTNNQEIYLNKSDTDVEFEILFIASPIRPDIGKT
Ga0099953_11893281	3300006351	Marine	MCLVYLNKSETDVELEILFIASPIRVEIGKTSMFLTFLVFSLLS
Ga0098060_10328911	3300006921	Marine	MFTNNQGNYLNKSDTEVELDILLIASPIRPEIGKTSMFLTF
Ga0111541_102202381	3300008097	Marine	MFINNQGNYLNKSDTDVELDILFIASPIRPEIGKTS
Ga0115566_102878851	3300009071	Pelagic Marine	MIVNNQGNYLNKSDTDVEFDILLIASPIRPEIGNTSMF
Ga0114932_105569111	3300009481	Deep Subsurface	MLINNQGNYLNKSETEVELEILLIASPIRPDIGKTSI
Ga0138403_10143541	3300011326	Marine	MFTNNQGIYLNKSDTDVEFEILFIASPIRPDMGKTSIFLTFLVL
Ga0138383_11745371	3300011330	Marine	MFINNQGNYLNKSETDVELEILFIASPIRAEIGKTSMF
Ga0160422_106700082	3300012919	Seawater	MFTNNQGNYLNKSETDVELDILLIASAIRPEIGKTSIFL
Ga0160422_107999761	3300012919	Seawater	MLINNQGNYLNKSDTDVELEILLIASPIKLEIDKTSIFLAL
Ga0163110_113773181	3300012928	Surface Seawater	MLINNQGNYLNKSDTDVELDILFIASPIRLDMGKT
Ga0163109_112973591	3300012936	Surface Seawater	MFINNQGIYLNKSDTDVEFEILFIASPIRPDIGKT
Ga0163111_101873834	3300012954	Surface Seawater	MLANNQGIYLNKSETDVELEILFIASPIRPEIGKTSI
Ga0163111_109276531	3300012954	Surface Seawater	MLINNQGIYLNKSDTDVEFDILFIASPIRLEIGKT
Ga0163111_114659871	3300012954	Surface Seawater	MFINNQEIYLNKSDTEVEFDILLIASPIRPEIGKT
Ga0163111_115566031	3300012954	Surface Seawater	MLINNQGNYLNKSDTDVELDILLIASPIRLEIGKTSIFLTL
Ga0181422_12516271	3300017762	Seawater	MIVNNQGNYLNKSDTDVELDILFIASPMSAEIGKTSIFFTFLVFSLL
Ga0187217_12055461	3300017770	Seawater	MFINNQGNYLNKSDTDVELEILFIASPIRPEIGKTSIFLT
Ga0181423_10427444	3300017781	Seawater	MFINNQGNYLNKSDTDVELDILLIASPISPEIGKTSIFLTFL
Ga0181379_10991553	3300017783	Seawater	MFINNQGIYLNKSETDVEFDILLIASPISPEIGKTSIFFT
Ga0181607_104877391	3300017950	Salt Marsh	MFTNNQGNYLNKSDTDVEFEILLMASPIRPEIGKT
Ga0181585_106934052	3300017969	Salt Marsh	MFTNNQEIYLNKSDTDVEFEILLIASPIRPDMGKTSIFL
Ga0181576_108556871	3300017985	Salt Marsh	MLINNQGNYLNKSDTEVEFEILFIASPIRPEIGKTSIFLTFF
Ga0181558_106654421	3300018417	Salt Marsh	MFINNQGIYLNKSDTEVELDILFIASPIRPEIGKTSMFFTFL
Ga0181593_105877082	3300018423	Salt Marsh	MLINNQGNYLNKSETEVELEILFIASPIRPEIGKTSIFFTFLVFSNLEAFKNFX
Ga0181568_111197951	3300018428	Salt Marsh	MLINNQGNYLNKSETEVELEILFIASPIRPEIGKTSIF
Ga0181568_114820451	3300018428	Salt Marsh	MFINNQGIYLNKSDTEVEFEILFIASPIKVDMGKTSIFFMFLV
Ga0181575_102715911	3300020055	Salt Marsh	MLANNQGNYLNKSETDVELEILFIASPMRPEIGKTSIFLTFLVLS
Ga0181597_100197807	3300020194	Salt Marsh	MFINNQGNYLNKSDTEVELDILLMASPINPEIDKTSIFLAFLTFSK
Ga0211501_11120412	3300020239	Marine	MLINNQGNYLNKSETEVELEIRLIASPIRPEIGKTSIFLTFFVLAIL
Ga0211494_10787181	3300020240	Marine	MFINNQGNYLNKSDTDVELDILLIASPISPEIGKTSIFLTFLIFSI
Ga0211627_10648661	3300020250	Marine	MFINNQGNYLNKSDTDVELDILLIASPISPEIGKTSIFLTFLIFS
Ga0211526_10969661	3300020264	Marine	MLVNNQGFYLNKSDTEVELEILFIASPISPEIGKTSIFLTFLILXW
Ga0211667_11559341	3300020282	Marine	MFINNQENYLNKSETEVEFDILLIASPINVEIGKTSMFLT
Ga0211517_10688652	3300020319	Marine	MFINNQDIYLNKSDTDVEFEILFIASPIRLEIGKTSIFLTF
Ga0211597_10043091	3300020320	Marine	MFINNQGNYLNKSETDVELEILFIASPIRAEIGKTSMFLTF
Ga0211504_11477212	3300020347	Marine	MFTNNQGNYLNKSDTDVELDILLIASPIRPEIGKTSMFLTFFVF
Ga0211674_101406801	3300020368	Marine	MFINNQGNYLNKSDTEVELEILLIASPIRPEIGKTSIFFACLVFS
Ga0211674_101643332	3300020368	Marine	MFVNNQEIYLNKSDTDVEFEILLIASPIRPDMGKTSIFLTF
Ga0211527_101280781	3300020378	Marine	MLINNQGNYLNKSDTDVEFDILFIASPIRPDIGKTSIFLTFFV
Ga0211652_101268031	3300020379	Marine	MLINNQGNYLNKSDTDVELEILFIASPIRPEIGKTSMFF
Ga0211677_102459091	3300020385	Marine	MLINNQGNYLNKSDTEVELEILFIASPIRPEIGKTS
Ga0211678_100394281	3300020388	Marine	MLINNQGNYLNKSETDVELEILFIASPIRPEIGKTSIFLTF
Ga0211678_103436021	3300020388	Marine	MFTNNQGNYLNKSETEVELDILFIASPIRPEIGKTSIFLTF
Ga0211675_100305725	3300020391	Marine	MFTNNQAVYLNKSDTDVEFEILFIASPMRPDIGKTSIFLTFL
Ga0211675_102771841	3300020391	Marine	MFINNQDIYLNKSDTEVEFEILFIASPIRLEIGKTSIFLTF
Ga0211705_101791922	3300020395	Marine	MLINNQDIYLNKSETEVELEILFIASPIRPEIGKTSIFLALL
Ga0211636_100825531	3300020400	Marine	MFINNQGNYLNKSDTDVELDILLIASPMRLEIGKTSIFLTFLV
Ga0211636_100963301	3300020400	Marine	MFVNNQDIYLNKSDTEVEFEILFIASPIRAEIGKTSIFL
Ga0211636_102022331	3300020400	Marine	MIINNQGNYLNKSETDVELDILLIASPIRPEIGKTSMFFTLLVFW
Ga0211617_101508891	3300020401	Marine	MSINNQGNYLNKSETEVELEILLIASPIRPEIGKTSI
Ga0211659_102017581	3300020404	Marine	MFTNNQEIYLNKSDTDVEFEILFIASPIRPDMGKTSIFLTFLVLXT
Ga0211659_105093142	3300020404	Marine	MFTNNQEIYLNKSETDVEFEILFIASPIRPDIGKT
Ga0211496_103803062	3300020405	Marine	MFINNQGNYLNKSETDVELDILLIASPIKAEIGKT
Ga0211472_101644761	3300020409	Marine	MIINNQGNYLNKSDTEVELDILFIASPIRPEIGKTSIFLTFLVLFV
Ga0211516_103658212	3300020413	Marine	MFINNQGNYLNKSETEVEFDILFIASPIRPEIGKTSIFLTFLVFST
Ga0211523_102516001	3300020414	Marine	MLINNQGNYLNKSDTDVEFDILFIASPIRPDIGKTSIF
Ga0211523_103584771	3300020414	Marine	MLINNQGNYLNKSDTEVELEILFIASPIRLEIGKTS
Ga0211523_104024551	3300020414	Marine	MLINNQGIYLNKSDTEVEFDILFIASPIKGEIVKTSI
Ga0211528_102485362	3300020417	Marine	MIVNNQDIYLNKSETEVELEILFIASPIKAEIGKTSIFFIFL
Ga0211528_103529622	3300020417	Marine	MLINNQGNYLNKSDTDVELEILFIASPIRPEIGKTSIFLT
Ga0211557_102578842	3300020418	Marine	MFLITQVNYLNKSETEVELEILLIASPIRLEIDKTSIFLTFLIF
Ga0211557_104056311	3300020418	Marine	MFINNQGNYLNKSDTDVELEILFIASPIRFETGKTSIFLTFLVFW
Ga0211580_100493711	3300020420	Marine	MFINNQGNYLNKSETDVELEILFIASPIRAEIGKTSMFLTFLVFS
Ga0211620_103624101	3300020424	Marine	MSTNNQGNYLNKSDTDVEFEILLMASPIRLEIDKTSMFFTFLVFST
Ga0211581_101383872	3300020429	Marine	MLTNNQGNYLNKSETEVEFEILFIASPIRPEIGKTSMFFTFFVLTLLSIVS
Ga0211581_104555482	3300020429	Marine	MFINNQDIYLNKSDTEVELEILLIASPINADIGKTSIFFIFLVFSPLFI
Ga0211554_103213492	3300020431	Marine	MFINNQGNYLNKSETDVELEILFIASPIRAEIGKTSMFLTFFVFSLLSI
Ga0211556_104256971	3300020432	Marine	MLINNQGNYLNKSETEVELEILFIASPISAEIGKTSIFLTL
Ga0211556_104446951	3300020432	Marine	MLINNQGNYLNKSDTEVELEILFIASAIRLDICKISIF
Ga0211565_102394131	3300020433	Marine	MLINNQGIYLNKSDTDVEFEILFIASPIRPDIGKTSIFLTFL
Ga0211539_102885071	3300020437	Marine	MLTNNQGIYLNKSETDVEFEILFIASPIRPDIGKTS
Ga0211518_100637694	3300020440	Marine	MFINNQGIYLNKSDTDVEFEILFIASPIRPDIGKTSIFLT
Ga0211518_101011173	3300020440	Marine	MFTNNQGNYLNKSDTDVELDILFIASPIRAEIGKTSIFFTFLV
Ga0211695_103216161	3300020441	Marine	MLINNQGNYLNKSETEVELEILFIASPIRAEIGKTSMFLTFFVFSLLS
Ga0211695_104237241	3300020441	Marine	MIINNQGIYLNKSDTEVELDILLIASPIRPEIGKTSIFLTFL
Ga0211559_105536132	3300020442	Marine	MFLNNQGNYLNKSETEVEFEILLIASPIRLEIGKTSMFLT
Ga0211574_100918043	3300020446	Marine	MFINNQGIYLNKSETDVELEILFIASPIRPEIGKTSIFLTFLVF
Ga0211574_101408061	3300020446	Marine	MLINNQGNYLNKSETDVELEILFIASPIRPEIGKTSIF
Ga0211574_103567611	3300020446	Marine	MFINNQEIYLNKSETDVEFEILFIASPMRPDIGKTSIFLTFLVLCTLSIVSVI
Ga0211691_101910292	3300020447	Marine	MFINNQGNYLNKSETDVELEILFIASPIRAEIGKTSIFLTFLVFSLLSIVS
Ga0211638_100688413	3300020448	Marine	MFINNQGNYLNKSDTDVELEILFIASPIRFEIGKTSIFLTFLVFWL
Ga0211641_104002012	3300020450	Marine	MFINNQGNYLNKSETDVELEILFIASPIRAEIGKTSMFLTFF
Ga0211641_104373342	3300020450	Marine	MFSNNQGNYLNKSETDVELDILFIASPISPEIGKTS
Ga0211548_104025202	3300020454	Marine	MFINNQGNYLNKSETDVELEILFIASPIRAEIGKTSMFLTFLVF
Ga0211514_106123722	3300020459	Marine	MFTNNQGNYLNKSETDVELDILLIASPISAEIGKTSIFLTFFVFSPL
Ga0211486_101983071	3300020460	Marine	MFKNNQDIYLNKSDTDVEFEILLIASPIRPDIGKTSIFLTFLVL
Ga0211676_100959294	3300020463	Marine	MFINNQDIYLNKSDTEVEFEILFIASPIRPEIGKTSIF
Ga0211676_102591893	3300020463	Marine	MLTNNQGIYLNKSDTDVEFEILFIASPIRPDMGKT
Ga0211676_103683291	3300020463	Marine	MFINNQGNYLNKSDTEVELDILLIASPIRPEIGKTSIF
Ga0211676_104110951	3300020463	Marine	MFANNQGIYLNKSETDVEFEILFIASPIRPEIGKTSIFLTFLVFA
Ga0211714_101154253	3300020466	Marine	MLINNQGNYLNKSETEVELEILFIASPIRAEIGKTSIFLT
Ga0211713_105154471	3300020467	Marine	MFKNNQGNYLNKSETDVELEILFIASPIRVEIVKTSIFLT
Ga0211577_105364231	3300020469	Marine	MLINNQGNYLNKSDTDVEFDILLIASPIRPEIGKTSIFLTFLVFSP
Ga0211579_106951232	3300020472	Marine	MLINNQGNYLNKSETEFEFEILFIASPIRPEIGKTSI
Ga0211547_101794483	3300020474	Marine	MFINNQGIYLNKSDTDVEFEILFIASPIRPDIGKTSIFLTFLVLXT
Ga0181598_13065152	3300020810	Salt Marsh	MFINNQGNYLNKSDTEVELDILLIASPIRPEIGKTSI
Ga0213859_102994772	3300021364	Seawater	MLINNQGNYLNKSDTDVELDILLIASPIRLEIGKTSIFL
(restricted) Ga0233443_13162602	3300024324	Seawater	MILITQDNYLNKSDTDVELEILLIASPMRLEIGKTSIFF
Ga0208878_10633002	3300026083	Marine	MFINNQGIYLNKSDTDVEFEILFIASPMRPEIGKTSIFLTFL
Ga0208639_10307311	3300026256	Marine	MLFITQEDYLNKSDTDVELEILFIASPIKLETVKTSIFLAL
Ga0208410_10025461	3300026266	Marine	MLINNQGIYLNKSETEVELEILFIASPIRPEIGKTSIFLTLLVFSPLL
Ga0208410_10677222	3300026266	Marine	MFTNNQGNYLNKSDTDVELEILLIASPIRPEIGKTSMFL
Ga0208766_10192171	3300026269	Marine	MLFITQEDYLNKSDTDVELEILFIASPIKLETVKTSIFLALLTLIXLS
Ga0207993_11890541	3300026270	Marine	MLINNQGNYLNKSDTEVEFEILLIASPIRPEIGKTSIFFT
Ga0209359_103044141	3300027830	Marine	MFTNNQGNYLNKSDTDVEFEILLMASPIRPEIGKTSIFLTFFVLSP
Ga0209503_104673821	3300027859	Marine	MFANNQVFYLNKSDTEVELDILFIASPISAEIGKTSIFL
Ga0308001_103099671	3300031644	Marine	MACSPSFLITQDNYLNKSDTDVELEILLIASPIRAEIGKSSIFLTFLILS
Ga0315331_107882431	3300031774	Seawater	MFINNQGNYLNKSDTDVELDILLIASPISPEIGKTSIF
Ga0315326_108005432	3300031775	Seawater	MLFITQENYLNKSDTDVELEILFIASPIKLETVKT
Ga0310343_102281753	3300031785	Seawater	MLTNNQGNYLNKSETDVELEILLIASPIRPEIGKTSIFLTF
Ga0310343_103815763	3300031785	Seawater	MFTNNQGNYLNKSETDVELDILLIASAIRPEIGKTSI
Ga0315318_107734462	3300031886	Seawater	MLFITQENYLNRSDTDVELEILFIASPIKFDIVKTSIFLVFLTFSWLLI
Ga0310344_104878103	3300032006	Seawater	MLINNQDIYLNKSETEVELEILFIASPIRPEIGKTSI
Ga0310344_113919672	3300032006	Seawater	MLINNQGNYLNRSETEVELEILFIASPMRLETGKTSIFLTFFVFSPLSI
Ga0315316_107293022	3300032011	Seawater	MFANNQGNYLNKSDTDVEFDILFIASPIRPEIGKTSIFLT
Ga0315316_107991701	3300032011	Seawater	MLIITQENYLNRSDTDVELEILFIASPIKLETVKTSIFLALL
Ga0315316_112652322	3300032011	Seawater	MLINNQGNYLNKSETEVELEILFIASPIRPEIGKTSIFLTFLVF
Ga0315330_104839352	3300032047	Seawater	MFINNQGNYLNKSDTDVELDILLIASPISPEIGKTS
Ga0315330_105919302	3300032047	Seawater	MFINNQGNYLNKSDTEVEFDILLIASPIRPEIGKTSIFLTFLVF
Ga0315315_108778421	3300032073	Seawater	MLINNQGIYLNKSDTEVEFDILFIASPIRGEIVKTSIFLTFLVFS
Ga0315315_111194171	3300032073	Seawater	MFINNQGNYLNKSDTDVELDILLIASPISPEIGKTSIFLTFLIFSELSIVS
Ga0315315_115276672	3300032073	Seawater	MLINNQDIYLNKSETEVELEILFIASPIRPEIGKTSIFLALLVFSPLLI
Ga0310345_118424702	3300032278	Seawater	MLIITQENYLNKSDTDVELEILFIASPIKLEIVKTSIFLALL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters