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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F051973 |
| Family Type | Metagenome |
| Number of Sequences | 143 |
| Average Sequence Length | 43 residues |
| Representative Sequence | MRIGIDCDGVLRDFIPALIDGIKETHPEHADKILTPTSWDW |
| Number of Associated Samples | 112 |
| Number of Associated Scaffolds | 143 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | No |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 95.10 % |
| % of genes near scaffold ends (potentially truncated) | 98.60 % |
| % of genes from short scaffolds (< 2000 bps) | 95.80 % |
| Associated GOLD sequencing projects | 98 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.53 |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (80.420 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (51.049 % of family members) |
| Environment Ontology (ENVO) | Unclassified (83.916 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (91.608 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 36.23% β-sheet: 0.00% Coil/Unstructured: 63.77% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.53 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 143 Family Scaffolds |
|---|---|---|
| PF11775 | CobT_C | 2.10 |
| PF07733 | DNA_pol3_alpha | 0.70 |
| PF11443 | DUF2828 | 0.70 |
| PF06941 | NT5C | 0.70 |
| PF05935 | Arylsulfotrans | 0.70 |
| PF00924 | MS_channel | 0.70 |
| COG ID | Name | Functional Category | % Frequency in 143 Family Scaffolds |
|---|---|---|---|
| COG0587 | DNA polymerase III, alpha subunit | Replication, recombination and repair [L] | 0.70 |
| COG0668 | Small-conductance mechanosensitive channel | Cell wall/membrane/envelope biogenesis [M] | 0.70 |
| COG2176 | DNA polymerase III, alpha subunit (gram-positive type) | Replication, recombination and repair [L] | 0.70 |
| COG3264 | Small-conductance mechanosensitive channel MscK | Cell wall/membrane/envelope biogenesis [M] | 0.70 |
| COG4502 | 5'(3')-deoxyribonucleotidase | Nucleotide transport and metabolism [F] | 0.70 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 80.42 % |
| All Organisms | root | All Organisms | 19.58 % |
| Visualization |
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| Powered by ApexCharts |
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| Habitat | Taxonomy | Distribution |
| Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 51.05% |
| Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 15.38% |
| Seawater | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater | 15.38% |
| Deep Subsurface | Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface | 4.90% |
| Seawater | Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater | 1.40% |
| Marine | Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine | 1.40% |
| Marine | Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine | 1.40% |
| Marine | Environmental → Aquatic → Marine → Coastal → Unclassified → Marine | 1.40% |
| Salt Marsh | Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh | 1.40% |
| Deep Ocean | Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean | 0.70% |
| Seawater | Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater | 0.70% |
| Microbial Mat | Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat | 0.70% |
| Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 0.70% |
| Sea-Ice Brine | Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine | 0.70% |
| Seawater | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater | 0.70% |
| Estuarine | Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine | 0.70% |
| Marine Estuarine | Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Marine Estuarine | 0.70% |
| Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 0.70% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 2236876001 | Marine microbial communities from Columbia River, CM, sample from CR-7km from mouth, GS312-0p1-CR7-chlmax | Environmental | Open in IMG/M |
| 3300002484 | Marine viral communities from the Pacific Ocean - ETNP_2_130 | Environmental | Open in IMG/M |
| 3300002514 | Marine viral communities from the Pacific Ocean - ETNP_6_85 | Environmental | Open in IMG/M |
| 3300002518 | Marine viral communities from the Pacific Ocean - ETNP_6_100 | Environmental | Open in IMG/M |
| 3300005430 | Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69 | Environmental | Open in IMG/M |
| 3300005597 | Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF51B | Environmental | Open in IMG/M |
| 3300005605 | Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67 | Environmental | Open in IMG/M |
| 3300006310 | Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m | Environmental | Open in IMG/M |
| 3300006329 | Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_0500m | Environmental | Open in IMG/M |
| 3300006339 | Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500m | Environmental | Open in IMG/M |
| 3300006565 | Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_2_0125m | Environmental | Open in IMG/M |
| 3300006735 | Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG | Environmental | Open in IMG/M |
| 3300006737 | Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG | Environmental | Open in IMG/M |
| 3300006738 | Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG | Environmental | Open in IMG/M |
| 3300006749 | Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG | Environmental | Open in IMG/M |
| 3300006750 | Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG | Environmental | Open in IMG/M |
| 3300006753 | Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG | Environmental | Open in IMG/M |
| 3300006754 | Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG | Environmental | Open in IMG/M |
| 3300006789 | Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG | Environmental | Open in IMG/M |
| 3300006900 | Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A | Environmental | Open in IMG/M |
| 3300006921 | Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG | Environmental | Open in IMG/M |
| 3300006923 | Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG | Environmental | Open in IMG/M |
| 3300006924 | Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG | Environmental | Open in IMG/M |
| 3300006927 | Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG | Environmental | Open in IMG/M |
| 3300006929 | Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG | Environmental | Open in IMG/M |
| 3300006990 | Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG | Environmental | Open in IMG/M |
| 3300007647 | Estuarine microbial communities from the Columbia River estuary - metaG 1370B-02 | Environmental | Open in IMG/M |
| 3300008050 | Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG | Environmental | Open in IMG/M |
| 3300009173 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 | Environmental | Open in IMG/M |
| 3300009409 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 | Environmental | Open in IMG/M |
| 3300009420 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 | Environmental | Open in IMG/M |
| 3300009481 | Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG | Environmental | Open in IMG/M |
| 3300009550 | Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome | Environmental | Open in IMG/M |
| 3300009593 | Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome | Environmental | Open in IMG/M |
| 3300009703 | Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaG | Environmental | Open in IMG/M |
| 3300009705 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 | Environmental | Open in IMG/M |
| 3300009785 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 | Environmental | Open in IMG/M |
| 3300009786 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126 | Environmental | Open in IMG/M |
| 3300010151 | Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG | Environmental | Open in IMG/M |
| 3300010153 | Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG | Environmental | Open in IMG/M |
| 3300010155 | Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG | Environmental | Open in IMG/M |
| 3300010883 | western Arctic Ocean co-assembly | Environmental | Open in IMG/M |
| 3300011013 | Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaG | Environmental | Open in IMG/M |
| 3300011253 | Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_2, permeate | Environmental | Open in IMG/M |
| 3300011258 | Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, permeate | Environmental | Open in IMG/M |
| 3300012952 | Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome | Environmental | Open in IMG/M |
| 3300017703 | Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaG | Environmental | Open in IMG/M |
| 3300017709 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27 | Environmental | Open in IMG/M |
| 3300017714 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15 | Environmental | Open in IMG/M |
| 3300017718 | Marine viral communities from the Subarctic Pacific Ocean - Lowphox_11 viral metaG | Environmental | Open in IMG/M |
| 3300017728 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24 | Environmental | Open in IMG/M |
| 3300017731 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16 | Environmental | Open in IMG/M |
| 3300017733 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 49 SPOT_SRF_2013-12-23 | Environmental | Open in IMG/M |
| 3300017737 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11 (version 2) | Environmental | Open in IMG/M |
| 3300017742 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21 | Environmental | Open in IMG/M |
| 3300017744 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23 | Environmental | Open in IMG/M |
| 3300017758 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30 | Environmental | Open in IMG/M |
| 3300017764 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11 | Environmental | Open in IMG/M |
| 3300017765 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28 | Environmental | Open in IMG/M |
| 3300017770 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2) | Environmental | Open in IMG/M |
| 3300017773 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24 | Environmental | Open in IMG/M |
| 3300017775 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17 | Environmental | Open in IMG/M |
| 3300017781 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14 | Environmental | Open in IMG/M |
| 3300017782 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19 | Environmental | Open in IMG/M |
| 3300017986 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300020340 | Marine microbial communities from Tara Oceans - TARA_B100001121 (ERX555960-ERR599119) | Environmental | Open in IMG/M |
| 3300020394 | Marine microbial communities from Tara Oceans - TARA_B000000557 (ERX556068-ERR599026) | Environmental | Open in IMG/M |
| 3300020397 | Marine microbial communities from Tara Oceans - TARA_B100000123 (ERX556052-ERR599075) | Environmental | Open in IMG/M |
| 3300020403 | Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145) | Environmental | Open in IMG/M |
| 3300020417 | Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556034-ERR599082) | Environmental | Open in IMG/M |
| 3300020421 | Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007) | Environmental | Open in IMG/M |
| 3300020428 | Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094) | Environmental | Open in IMG/M |
| 3300020436 | Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984) | Environmental | Open in IMG/M |
| 3300020439 | Marine microbial communities from Tara Oceans - TARA_B100001939 (ERX556062-ERR599029) | Environmental | Open in IMG/M |
| 3300020442 | Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162) | Environmental | Open in IMG/M |
| 3300020446 | Marine microbial communities from Tara Oceans - TARA_B100001287 (ERX556031-ERR598989) | Environmental | Open in IMG/M |
| 3300020449 | Marine microbial communities from Tara Oceans - TARA_B100001079 (ERX556008-ERR599020) | Environmental | Open in IMG/M |
| 3300020454 | Marine microbial communities from Tara Oceans - TARA_B100001769 (ERX556037-ERR599170) | Environmental | Open in IMG/M |
| 3300020464 | Marine microbial communities from Tara Oceans - TARA_B100000530 (ERX556075-ERR599101) | Environmental | Open in IMG/M |
| 3300020470 | Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053) | Environmental | Open in IMG/M |
| 3300020471 | Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002) | Environmental | Open in IMG/M |
| 3300022074 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2) | Environmental | Open in IMG/M |
| 3300023110 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG | Environmental | Open in IMG/M |
| 3300025066 | Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025070 | Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025072 | Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025086 | Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025102 | Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025112 | Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes) | Environmental | Open in IMG/M |
| 3300025114 | Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025118 | Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025125 | Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes) | Environmental | Open in IMG/M |
| 3300025128 | Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025131 | Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes) | Environmental | Open in IMG/M |
| 3300025133 | Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025141 | Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes) | Environmental | Open in IMG/M |
| 3300025151 | Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes) | Environmental | Open in IMG/M |
| 3300025168 | Marine viral communities from the Pacific Ocean - LP-53 (SPAdes) | Environmental | Open in IMG/M |
| 3300025282 | Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 (SPAdes) | Environmental | Open in IMG/M |
| 3300025806 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300026206 | Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV74 (SPAdes) | Environmental | Open in IMG/M |
| 3300026267 | Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV259 (SPAdes) | Environmental | Open in IMG/M |
| 3300027704 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300027771 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300027779 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes) | Environmental | Open in IMG/M |
| 3300027859 | Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome (SPAdes) | Environmental | Open in IMG/M |
| 3300029319 | Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516 | Environmental | Open in IMG/M |
| 3300031702 | Marine microbial communities from David Island wharf, Antarctic Ocean - #37 | Environmental | Open in IMG/M |
| 3300032011 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416 | Environmental | Open in IMG/M |
| 3300032277 | Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotite | Environmental | Open in IMG/M |
| 3300032820 | Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG | Environmental | Open in IMG/M |
| 3300033742 | Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawater | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| none_1713903 | 2236876001 | Marine Estuarine | MRIGIDCDGVLRDLITCITDTVKETHPQHADKILEPTSWIGSMVTF |
| JGI25129J35166_10952972 | 3300002484 | Marine | MRIGIDCDGVLRDFIPDLINKIKETHPEHTDKIGIPHSWDWEDWL |
| JGI25133J35611_100301311 | 3300002514 | Marine | MRIGIDCDGVLRDFIPHLIDNIKETHPEHTDKILTPTSWDWEQWLPFWS |
| JGI25134J35505_101285691 | 3300002518 | Marine | MRIGIDCDGVLRDFIPALIDSIKTTHPQYADKIKTSTSWDWEQWLPF |
| Ga0066849_103036921 | 3300005430 | Marine | MRIGIDCDGVLRDFIPDLVDSINETHPEHSDKILVPESWDWDQW |
| Ga0066832_101165652 | 3300005597 | Marine | MRIGIDCDGVLRDFIPDLINKIKEVYPEHADKIGIPHSWDWEEWLPFWT |
| Ga0066850_100367081 | 3300005605 | Marine | MRIGIDCDGVLRDFITDLIEGVKTTHPEHTNKIKT |
| Ga0068471_12998822 | 3300006310 | Marine | LRIGIDCDGVLRDFIPDLINKIKETHPELAYGIRVPT |
| Ga0068486_11233673 | 3300006329 | Marine | MRIGIDCDGVLRDLITCITDTVKETHPQHADKILEPTSWDWEQWLPFWTEDET |
| Ga0068481_11961732 | 3300006339 | Marine | MRIGIDCDGVLRDFIPDLINKIKETHPEHADKIGV |
| Ga0100228_11141841 | 3300006565 | Marine | MRIGIDCDGVLRDFIPDLIEGIKTTHPQHADKILVPEGWDWE |
| Ga0098038_11960323 | 3300006735 | Marine | MRIGIDCDGVLRDLITCITDTVKETHPQHADKILEPTSWDWDQWLPF |
| Ga0098037_11138163 | 3300006737 | Marine | MGLRIGFDCDGVLRDFIPDLIECIKTTHPEHADKILTPESWDWD |
| Ga0098037_12380653 | 3300006737 | Marine | MRIGIDCDGVLRDLIPAIVDGIKTTHPQHADKILTPTSWDWEQWLPFWTD |
| Ga0098035_11223174 | 3300006738 | Marine | MRIGIDCDGVLRDFIPALIDSIKETHPEHADKIKTSRSWDWEDWL |
| Ga0098042_10793334 | 3300006749 | Marine | MRIGIDCDGVLRDLITCITDTVKETHPQHADKILTAESWDWEQWLPFWTD |
| Ga0098058_10454531 | 3300006750 | Marine | MRIGIDCDGVLRDLINCITDTVKETHPQYADKILEPTSWDWEQWLPFWTDDE |
| Ga0098039_10258742 | 3300006753 | Marine | MRIGIDCDGVLRDFIPDLINKIKETHPEHADKIGIPHSWDWEDW |
| Ga0098039_10747244 | 3300006753 | Marine | MRIGIDCDGVLRNFIPALIDSIKETHPEHADKIKTSRSWDW |
| Ga0098039_13357582 | 3300006753 | Marine | MRIGIDCDGVLRDFIPALISSIEKTHPEHTGKIRIPTSWD |
| Ga0098044_13185874 | 3300006754 | Marine | MRIGIDCDGVLRDFIPDLISSINETHPEHVDKIKPVEAW |
| Ga0098054_11402264 | 3300006789 | Marine | MRIGIDCDGVLRDLITCITDTVSETHPQHADKILTPTSWDWEQWLPF |
| Ga0098054_12973411 | 3300006789 | Marine | MARIGIDCDGVLRDFIPDLIDGIKTTHPEHADKILVP |
| Ga0098054_13615823 | 3300006789 | Marine | MRIGIDCDGVLRDLITGITDTVSETHPQHADKILEPTSWDWEQLLPFWTDDETEKY |
| Ga0066376_107091651 | 3300006900 | Marine | MRIGKDCDGVLRDFIPDLINKIKETHPELAYGIRVPTSW |
| Ga0098060_10378914 | 3300006921 | Marine | MQIGIDCDGVLRDLITCITDTVSETHPQHADKILEP |
| Ga0098053_10206473 | 3300006923 | Marine | MRIGIDCDGVLRDLIPAIVDGIKETHPQHADKILKPTSWDWEQWLPFW |
| Ga0098053_10828832 | 3300006923 | Marine | MRIGIDCDGVLRDFIPDLINKIKETHPEHADKIGIPHS |
| Ga0098051_10329661 | 3300006924 | Marine | MRIGIDCDGVLRDFIPQLIESIKETHPEHADKILV |
| Ga0098051_11440731 | 3300006924 | Marine | MRIGIDCDGVLRDLIPAIVEGIKVTHPEHADKILKPTS |
| Ga0098034_10109431 | 3300006927 | Marine | MRIGIDCDGVLRDFIPDLINKIKEVYPEHADKIGI |
| Ga0098036_12238823 | 3300006929 | Marine | MRIGIDCDGVLRDFIPQLIESIKETHPEHADKILVPT |
| Ga0098036_12586683 | 3300006929 | Marine | MRIGIDCDGVLRDFIPALIDGIKETHPEHADKILTPTSWDW |
| Ga0098046_10476121 | 3300006990 | Marine | MRIGIDCDGVLRDLITCITDTVSETHPQHADKILTPTS |
| Ga0098046_10561673 | 3300006990 | Marine | MRIGIDCDGVLRDLITCITDTVKETHPQHADKILTPTSWDWEQWLPFWT |
| Ga0102855_10286921 | 3300007647 | Estuarine | MRIGIDCDGVLRDLITCITDTVKETHPQHADKILEPTSWDWDQWLP |
| Ga0098052_10699033 | 3300008050 | Marine | MRIGIDCDGVLRDFIPHLIDNIKETHPEHTDKILTPTSWDWEQWLPFWTDEE |
| Ga0114996_111622312 | 3300009173 | Marine | MEVLDKMRIGIDCDGVLRDFIPDLIEGIKTTHSEHVDKI |
| Ga0114993_105226291 | 3300009409 | Marine | MRIGIDCDGVLRDLITCITDTVKVTHPQHADEILKPTS |
| Ga0114993_109494131 | 3300009409 | Marine | MEKMRIGIDCDGVLRDFIPDLISSIRETHPQHTDKIKPVEAWEWESWLPFWTE |
| Ga0114994_101515904 | 3300009420 | Marine | MRIGFDCDGVLRDFIPALIDGIKETHPQHADKILVPKSWDWEQWLPFW |
| Ga0114932_102367721 | 3300009481 | Deep Subsurface | MRIGIDCDGVLRDLITCITDTVKETHPQHADKILEPTSWDWDQWLPFWTNDETE |
| Ga0114932_103439901 | 3300009481 | Deep Subsurface | MRIGIDCDGVLRDLIPAIVEGIKATHPEHADKILKPTSW |
| Ga0115013_109373591 | 3300009550 | Marine | MRIGIDCDGVLRDLITCITDTVKETHPQHADKILEPTSWDWD |
| Ga0115011_111217533 | 3300009593 | Marine | MEGLMGLRIGIDCDGVLRDLIPCITDSIKETHPQHADKILEPNSWNWSDWLPF |
| Ga0114933_101524811 | 3300009703 | Deep Subsurface | MRIGIDCDGVLRDLITCITDTVKVTHPQHADKILEPTSWDWDQWLPFWT |
| Ga0115000_109127401 | 3300009705 | Marine | MGLRIGIDCDGVLRDFIPDLIEGIKTTHPQHADKILIPE |
| Ga0115001_102188284 | 3300009785 | Marine | MRIGIDCDGVLRDLITCITDTVKVTHPQHTDKILEPTSWDWEQWLP |
| Ga0114999_108757361 | 3300009786 | Marine | MEVLDKMRIGIDCDGVLRDFIPDLISSIKETHPQHADKIKKVEA |
| Ga0098061_12277141 | 3300010151 | Marine | MRIGIDCDGVLRDFIPDLINKIKETHPEHADKIGTPHSWEWEDWLPF |
| Ga0098061_13160653 | 3300010151 | Marine | MRIGIDCDGVLRDFIPALIDGVKETHPEHADKILV |
| Ga0098059_13003651 | 3300010153 | Marine | VGLRIGIDCDGVLRDFIPDLIEGIKTTHPEHADKILVPEGW |
| Ga0098047_101863922 | 3300010155 | Marine | MRIGIDCDGVLRDFIPALIDSVKETHPQHADKIKTP |
| Ga0133547_120268823 | 3300010883 | Marine | MRIGIDCDGVLRDFIPALIDGIKETHPEHADKILVP |
| Ga0114934_101095151 | 3300011013 | Deep Subsurface | MKIGIDCDGVLRDLITCITDTVKETHPQHADKILEPTSWDWDQWLPF |
| Ga0114934_104574171 | 3300011013 | Deep Subsurface | MRIGIDCDGVLRDFIPCLIDDIKETHPEHSDKILVPKS |
| Ga0114934_104750853 | 3300011013 | Deep Subsurface | MRIGIDCDGVLRDLIPAIVDSIKTTHPQHADKILTPTSW |
| Ga0114934_105148182 | 3300011013 | Deep Subsurface | MRIGIDCDGVLRDFIPHVAAHIKENYPEHANKVGIPTSWEW |
| Ga0151671_10676442 | 3300011253 | Marine | MEGFMGLRIGIDCDSVLRDLIPAITDSVKETHPQHADKILTPKEWDWDTMVTILDK* |
| Ga0151677_11431431 | 3300011258 | Marine | MRIGIDCDGVLRDFIPQLIDNIKETHPEHADKILVPTS |
| Ga0163180_104754841 | 3300012952 | Seawater | VYGKGRKNMRIGIDCDGVLRDFIPDLVEKIKVTNPEYTDEILVPEA |
| Ga0163180_105356841 | 3300012952 | Seawater | MRIGIDCDGVLRNFIPDLINKIKQTHPQHSDKILVPKSWDWET |
| Ga0181367_10579982 | 3300017703 | Marine | MRIGIDCDGVLRDFIPHLINHIKENHPEHADKIGISTSWDWE |
| Ga0181387_10757761 | 3300017709 | Seawater | MRIGFDCDGVLRDFIPALIDGIKETHPQHADKMLVP |
| Ga0181412_11106641 | 3300017714 | Seawater | MRIGIDCDGVLRDLITCITDTVKETHPQHADKILTPTS |
| Ga0181375_10695823 | 3300017718 | Marine | MRIGIDCDGVLRDLIPAIVDGIKETHPQHADKILKPTSWDWE |
| Ga0181375_10721633 | 3300017718 | Marine | MRIGIDCDGVLRDFIPCLIDGIKETHPEHTDKIKPVESWEWESWLPFW |
| Ga0181419_10981364 | 3300017728 | Seawater | MRIGIDCDGVLRDLITCITDTVKVTHPQHADKILEPTSW |
| Ga0181416_10723964 | 3300017731 | Seawater | MRIGIDCDGVLRDLITCITDTVKVTHPQHADKILEPTSWDW |
| Ga0181426_10461134 | 3300017733 | Seawater | MRIGIDCDGVLRDLITCITDTVKVTHPQHADKILEPTSWDWDQWLPFWTNDET |
| Ga0187218_10766301 | 3300017737 | Seawater | MRIGIDCDGVLRDLITCITDTVKETHPQHADKILEPTSWD |
| Ga0181399_10825634 | 3300017742 | Seawater | MRIGIDCDGVLRDLITCITDTVKVTHPQHADKILEPTSWDWDQWLPFWTNDE |
| Ga0181397_11241901 | 3300017744 | Seawater | MRIGIDCDGVLRDLITCITDTVKVTHPQHADKILEPTSWDWDQWLPFW |
| Ga0181409_11998621 | 3300017758 | Seawater | MRIGIDCDGVLRDLIPCITDSIKETHPEHADKILEPNSWNWED |
| Ga0181385_11341303 | 3300017764 | Seawater | MRIGIDCDGVLRDFIPDLIEGIKEQYPEHADKILVPEGWDWETWLPFWTEE |
| Ga0181385_11661501 | 3300017764 | Seawater | MGLRIGFDCDGVLRDFIPDLIEGIKTTHPEHADKILTPESWEWEQWLPF |
| Ga0181413_11682423 | 3300017765 | Seawater | MRIGIDCDGVLRDLIPAIVDGIKTTHPQHADKILEPTSWDWE |
| Ga0187217_11775713 | 3300017770 | Seawater | MRIGIDCDGVLRDLITCITDTVSETHPQHADKILTPTSWDWEQWLPFWTD |
| Ga0181386_11995381 | 3300017773 | Seawater | MRIGIDCDGVLRDLITCITDTVKVTHPQHTDKILDS |
| Ga0181432_11328951 | 3300017775 | Seawater | MRIGIDCDGVLRDFIPDLINKIKETHPEHADKIGVPHSWNWEDWLPF |
| Ga0181432_11802441 | 3300017775 | Seawater | MRIGIDCDGVLRDLISCITDSIKETHPEHADKILAVETWD |
| Ga0181432_11921963 | 3300017775 | Seawater | MRIGIDCDGVLRDFIPALTESIKQTHPEHTDKILVPH |
| Ga0181432_12424173 | 3300017775 | Seawater | MRIGIDCDGVLRDLIPAIIEGIKATHPEHADKILTPTSWDWEQRL |
| Ga0181423_12566364 | 3300017781 | Seawater | MRIGIDCDGVLRDLITCITDTVKETHPQHTDKILEPTSWDWDQWLPFW |
| Ga0181423_13836791 | 3300017781 | Seawater | MRIGIDCDGVLRDLITCITDTVKETHPQHADKILEPTSWDWDQWLPFWTNDETEKY |
| Ga0181380_11497311 | 3300017782 | Seawater | MRIGIDCDGVLRDLITCITDTVKVTHPQHTDKILEPTSWDWEQWLPFW |
| Ga0181569_107209971 | 3300017986 | Salt Marsh | MRIGIDCDGVLRDLITCITDTVKETHPQHADKILTPTSWDWEQWLPFWTDDET |
| Ga0211594_10314951 | 3300020340 | Marine | MGLRIGIDCDGVLRDLIPCITDSIKETHPQHVDKILEPNSWNWS |
| Ga0211497_102379173 | 3300020394 | Marine | MRIGIDCDGVLRDLIPAIVDGIKTTHPQHADKILTPTSWDWEQWLPFWSDDET |
| Ga0211583_100249453 | 3300020397 | Marine | MKIGIDCDGVLRDLITCITDTVKETHPQHADKILE |
| Ga0211532_101309413 | 3300020403 | Marine | MRIGIDCDGVLRDLIPCITDSIKETHPEHADKILEPNSWNWEDWLPFWSEERT |
| Ga0211528_101188091 | 3300020417 | Marine | MGLRIGIDCDGVLRDLIPCITDSIKETHPQHADKILEPNSWNWSDW |
| Ga0211528_102348793 | 3300020417 | Marine | MGLRIGIDCDGVLRDLIPCITDSIKETHPQHADKILEPNSWNWEDWLPFW |
| Ga0211653_104335133 | 3300020421 | Marine | MRIGIDCDGVLRDLITCITDSVKETHPQHADKILTAESWDWEQWLPFWTDDETE |
| Ga0211521_101652653 | 3300020428 | Marine | MGLRIGFDCDGVLRDFIPDLIEGIKTTHPEHADKILVPESWDWEQWL |
| Ga0211708_100560191 | 3300020436 | Marine | MGLRIGIDCDGVLRDLIPCITDSIKETHPHHADKIL |
| Ga0211708_103344112 | 3300020436 | Marine | MGLRIGIDCDGVLRDLIPCITDSIKETHPQHADKILEPNSWNWED |
| Ga0211708_104196463 | 3300020436 | Marine | MGLRIGIDCDGVLRDLIPCITDSIKETHPQHADKILEP |
| Ga0211558_104875083 | 3300020439 | Marine | MRIGIDCDGVLRDLIPAIVDGIKTTHPQHADKILTPTSWDWEQW |
| Ga0211559_102731973 | 3300020442 | Marine | MRIGIDCDGVLRDLIPCITDSIKETHPEHADKILEPNSWNWEDWLPFW |
| Ga0211574_102767084 | 3300020446 | Marine | MRIGIDCDGVLRDLITCITDTVKETHPQHADKILTPTSWDWEQWLP |
| Ga0211642_104439623 | 3300020449 | Marine | MRIGIDCDGVLRDLIPAIVDSIKTTHPQHADKILTPTSWDWEQWLPFWT |
| Ga0211548_106521591 | 3300020454 | Marine | MRIGIDCDGVLRDLITCITDTVKETHPQHADKILEP |
| Ga0211694_104333603 | 3300020464 | Marine | MKIGIDCDGVLRDLITCITDTVKETHPQHADKILEPTSWVW |
| Ga0211543_105773901 | 3300020470 | Marine | MGLRIGIDCDGVLRDFIPDLIEGIKTTHPEHADKILVPR |
| Ga0211614_101008951 | 3300020471 | Marine | MGLRIGIDCDGVLRDLIPCITDSIKETHPQHSDKILEPNS |
| Ga0224906_10545121 | 3300022074 | Seawater | MRIGIDCDGVLRDLITCITDTVKVTHPQHADKILEPTSWDWDQ |
| Ga0255743_104499174 | 3300023110 | Salt Marsh | MRIGIDCDGVLRDLITCITDTVKETHPQHADKILTPTSWDW |
| Ga0208012_10199991 | 3300025066 | Marine | MRIGIDCDGVLRDLIPAIVDGIKETHPQHADKILKPTSWDW |
| Ga0208667_10607954 | 3300025070 | Marine | MRIGIDCDGVLRDLITCITDTVKETHPQHADKILEPTSWDWDQWL |
| Ga0208920_10795523 | 3300025072 | Marine | MRIGIDCDGVLRDFIPHLIDNIKETHPEHTDKILTPTSWDWEQWL |
| Ga0208157_10713892 | 3300025086 | Marine | MGLRIGFDCDGVLRDFIPDLIECIKTTHPEHADKILTPESWDW |
| Ga0208666_11138384 | 3300025102 | Marine | MGLRIGIDCDGVLRDLIPCITDSIKETHPQHADKILEPNSWNWSDWLPFW |
| Ga0209349_100426811 | 3300025112 | Marine | MRIGIDCDGVLRDFIPDLINKIKEVYPEHADKIGIPTSW |
| Ga0208433_10218172 | 3300025114 | Marine | MRIGIDCDGVLRDFIPDLINKIKEVYPEHADKIGIPTSWDWEEWLP |
| Ga0208433_11129312 | 3300025114 | Marine | MRIGIDCDGVLRDFIPDLINKIKETHPEHADKIGIPHSWDWEDWL |
| Ga0208790_10917771 | 3300025118 | Marine | MRIGIDCDGVLRDFIPDLINKIKEVYPEHADKIGIPTSWDWEEWL |
| Ga0209644_11635543 | 3300025125 | Marine | MRIGIDCDGVLRDFIGDLKDNIKENYPRLAGKIKTPETWNWEDWL |
| Ga0208919_11519514 | 3300025128 | Marine | MRIGIDCDGVLRDLITCITDTVKETHPQHADKILEPTS |
| Ga0209128_11451232 | 3300025131 | Marine | MRIGIDCDGVLRDFIPDLINKIKETHPEHADKIGVPTSWNWEEWLPFW |
| Ga0208299_10297837 | 3300025133 | Marine | MRIGIDCDGVLRDFIPHLINHIKENHPEHADKIGVPTSWDWEQWLPF |
| Ga0208299_10791802 | 3300025133 | Marine | MRIGIDCDGVLRDFIPDLINKIKETHPEHADKIGIPHSWDWEDWLPFW |
| Ga0209756_10790053 | 3300025141 | Marine | MRIGIDCDGVLRDFIPHLIDNIKETHPEHTDKILTPTSWDWEQWLPFWSV |
| Ga0209756_11610442 | 3300025141 | Marine | MRIGIDCDGVLRDFIPDLINKIKETHPEYADKIGIPRSWDW |
| Ga0209756_12500631 | 3300025141 | Marine | MRIGIDCDGVLRDFIPDLINKIKETHPEHADKIGVPRSWDWEE |
| Ga0209756_12943863 | 3300025141 | Marine | MRIGIDCDGVLRDLITCITDTVSETHPQHADKILTPTSWDWEQWLPFWTDE |
| Ga0209645_10935515 | 3300025151 | Marine | MRIGIDCDGVLRDLITCITDTVKETHPQHADKILTAESWDWEQW |
| Ga0209337_11237042 | 3300025168 | Marine | MRIGIDCDGVLRDFIPDLINKIKETHPQFADKIKIPNSWDWEQWLP |
| Ga0209337_13398321 | 3300025168 | Marine | MGLRIGFDCDGVLRDFIPDLIKGIKTTHPEHADKILTPESW |
| Ga0208030_11096981 | 3300025282 | Deep Ocean | MRIGIDCDGVLRDLITCITDTVKVTHPQHADKILEPTSWDWD |
| Ga0208545_11187971 | 3300025806 | Aqueous | MRIGIDCDGVLRDFIPALIDGIKETHPEHTDKILVPTSWDWEQ |
| Ga0207988_10500211 | 3300026206 | Marine | MRIGIDCDGVLRDFIPDLINKIKEVYPEHADKIGIPTSWDWEE |
| Ga0208278_11112262 | 3300026267 | Marine | MRIGIDCDGVLRDFIPDLINKIKETHPEHADKIGIPHSW |
| Ga0209816_12676552 | 3300027704 | Marine | MRIGIDCDGVLRDFIPDLINKIKETHPQFADKIKIPN |
| Ga0209279_101208441 | 3300027771 | Marine | MRIGIDCDGVLRDLITCIIDTVKETHPQHADKILEPTSWD |
| Ga0209709_103079401 | 3300027779 | Marine | MRIGIDCDGVLRDFIPDLITLIKEKHPEHADKILVPNSWDWEQ |
| Ga0209503_106710093 | 3300027859 | Marine | MRIGIDCDGVLRDLITCITDTVKETHPQHADKILEPTSW |
| Ga0183748_10984291 | 3300029319 | Marine | MKIGIDCDGVLRDFIPQIINTIKKTHPEHADKILVPMSWDWEQWLPFW |
| Ga0307998_10397583 | 3300031702 | Marine | MRIGIDCDGVLRDLITCITDTVKETHPQHADKILEPTSWDWEQWL |
| Ga0315316_105890251 | 3300032011 | Seawater | MRIGIDCDGVLRDFIPDVINKIKETHPQHADEILVP |
| Ga0316202_105726971 | 3300032277 | Microbial Mat | MRIGFDCDGVLRDFIPALIDGIKETHPQHADKMLVPTSWDWEQWLPF |
| Ga0310342_1020196922 | 3300032820 | Seawater | VVYYSMRIGIDCDGVLRDFIPDLINKIKETNPELKDKIKPVEAWEWESW |
| Ga0314858_141265_486_617 | 3300033742 | Sea-Ice Brine | MRIGIDCDGVLRDLITCITDTVKVTHPQHTDKILEPTSWDWEQW |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |