Metagenome / Metatranscriptome Family F051954

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051954
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	56 residues
Representative Sequence	MPLRREVQFLRERARRLREMADENQTALSDRLRMMAHELEARADELERAGLTE
Number of Associated Samples	105
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.82 %
% of genes near scaffold ends (potentially truncated)	23.78 %
% of genes from short scaffolds (< 2000 bps)	88.81 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.643 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (39.161 % of family members)
Environment Ontology (ENVO)	Unclassified (42.657 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (58.741 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Mixed	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.02% β-sheet: 0.00% Coil/Unstructured: 41.98%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF00072	Response_reg	16.78
PF08241	Methyltransf_11	3.50
PF00472	RF-1	2.80
PF05173	DapB_C	2.10
PF13467	RHH_4	2.10
PF10003	DUF2244	1.40
PF02371	Transposase_20	1.40
PF01527	HTH_Tnp_1	0.70
PF02597	ThiS	0.70
PF02738	MoCoBD_1	0.70
PF00224	PK	0.70
PF13181	TPR_8	0.70
PF02537	CRCB	0.70
PF00722	Glyco_hydro_16	0.70
PF00005	ABC_tran	0.70
PF00872	Transposase_mut	0.70
PF03232	COQ7	0.70
PF00486	Trans_reg_C	0.70
PF00027	cNMP_binding	0.70
PF13545	HTH_Crp_2	0.70
PF00521	DNA_topoisoIV	0.70
PF05717	TnpB_IS66	0.70
PF05239	PRC	0.70
PF00994	MoCF_biosynth	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG0216	Protein chain release factor RF1	Translation, ribosomal structure and biogenesis [J]	2.80
COG1186	Protein chain release factor PrfB	Translation, ribosomal structure and biogenesis [J]	2.80
COG0289	4-hydroxy-tetrahydrodipicolinate reductase	Amino acid transport and metabolism [E]	2.10
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.40
COG0188	DNA gyrase/topoisomerase IV, subunit A	Replication, recombination and repair [L]	0.70
COG0239	Fluoride ion exporter CrcB/FEX, affects chromosome condensation	Cell cycle control, cell division, chromosome partitioning [D]	0.70
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	0.70
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	0.70
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	0.70
COG2273	Beta-glucanase, GH16 family	Carbohydrate transport and metabolism [G]	0.70
COG2941	Demethoxyubiquinone hydroxylase, CLK1/Coq7/Cat5 family (ubiquinone biosynthesis)	Coenzyme transport and metabolism [H]	0.70
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.70
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.64 %
All Organisms	root	All Organisms	43.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.64 %
cellular organisms	root	All Organisms → cellular organisms	43.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.64 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.66 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.17 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.70 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.64 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24.48 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.70 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.70 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.64 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	6.99 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.90 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	0.70 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.64 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	6.99 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.90 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	0.70 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.70 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.64 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	5.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.90 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1.40 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	0.70 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.70 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.64 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	5.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.90 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1.40 %
Rathayibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Rathayibacter	0.70 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.70 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.64 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	5.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.90 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1.40 %
Rathayibacter toxicus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Rathayibacter → Rathayibacter toxicus	0.70 %
Symbiodinium microadriaticum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	0.70 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10021282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3630	Open in IMG/M
3300001661\|JGI12053J15887_10174276	Not Available	1111	Open in IMG/M
3300001661\|JGI12053J15887_10203133	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300002568\|C688J35102_117986343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Rathayibacter → Rathayibacter toxicus	520	Open in IMG/M
3300002568\|C688J35102_120826729	All Organisms → cellular organisms → Bacteria	1712	Open in IMG/M
3300002568\|C688J35102_120868978	Not Available	1913	Open in IMG/M
3300004081\|Ga0063454_100038295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1777	Open in IMG/M
3300004081\|Ga0063454_100110828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1341	Open in IMG/M
3300004114\|Ga0062593_100624247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1033	Open in IMG/M
3300004114\|Ga0062593_102323664	Not Available	603	Open in IMG/M
3300005184\|Ga0066671_11080586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	502	Open in IMG/M
3300005329\|Ga0070683_102043240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	551	Open in IMG/M
3300005332\|Ga0066388_100186327	All Organisms → cellular organisms → Bacteria → Proteobacteria	2688	Open in IMG/M
3300005332\|Ga0066388_100320863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2195	Open in IMG/M
3300005332\|Ga0066388_104010521	Not Available	751	Open in IMG/M
3300005355\|Ga0070671_100422818	All Organisms → cellular organisms → Bacteria → Proteobacteria	1141	Open in IMG/M
3300005363\|Ga0008090_13610143	Not Available	541	Open in IMG/M
3300005364\|Ga0070673_100286665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1446	Open in IMG/M
3300005366\|Ga0070659_101847606	Not Available	541	Open in IMG/M
3300005434\|Ga0070709_11715220	Not Available	513	Open in IMG/M
3300005435\|Ga0070714_100249448	All Organisms → cellular organisms → Bacteria	1641	Open in IMG/M
3300005467\|Ga0070706_100190436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1917	Open in IMG/M
3300005467\|Ga0070706_101874549	Not Available	544	Open in IMG/M
3300005468\|Ga0070707_100921546	Not Available	838	Open in IMG/M
3300005471\|Ga0070698_100591567	Not Available	1050	Open in IMG/M
3300005532\|Ga0070739_10078318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1958	Open in IMG/M
3300005534\|Ga0070735_10081367	Not Available	2066	Open in IMG/M
3300005569\|Ga0066705_10568836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	700	Open in IMG/M
3300005574\|Ga0066694_10197271	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300005576\|Ga0066708_10042374	All Organisms → cellular organisms → Bacteria → Proteobacteria	2507	Open in IMG/M
3300005587\|Ga0066654_10580612	Not Available	619	Open in IMG/M
3300005598\|Ga0066706_11397511	Not Available	528	Open in IMG/M
3300005842\|Ga0068858_101812105	Not Available	603	Open in IMG/M
3300006028\|Ga0070717_10277843	All Organisms → cellular organisms → Bacteria → Proteobacteria	1485	Open in IMG/M
3300006028\|Ga0070717_11863658	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300006031\|Ga0066651_10368485	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300006032\|Ga0066696_10104969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1705	Open in IMG/M
3300006046\|Ga0066652_101058043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	769	Open in IMG/M
3300006046\|Ga0066652_101520044	Not Available	620	Open in IMG/M
3300006358\|Ga0068871_101975612	Not Available	555	Open in IMG/M
3300006800\|Ga0066660_10852483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	742	Open in IMG/M
3300006806\|Ga0079220_10879645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	691	Open in IMG/M
3300006954\|Ga0079219_11220835	All Organisms → cellular organisms → Bacteria → Proteobacteria	653	Open in IMG/M
3300007255\|Ga0099791_10555405	Not Available	560	Open in IMG/M
3300007788\|Ga0099795_10233873	Not Available	787	Open in IMG/M
3300009012\|Ga0066710_102106460	Not Available	829	Open in IMG/M
3300009038\|Ga0099829_10242147	All Organisms → cellular organisms → Bacteria	1469	Open in IMG/M
3300009038\|Ga0099829_10341322	Not Available	1232	Open in IMG/M
3300009038\|Ga0099829_10539821	Not Available	969	Open in IMG/M
3300009089\|Ga0099828_10197720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1793	Open in IMG/M
3300009090\|Ga0099827_10562835	Not Available	982	Open in IMG/M
3300009090\|Ga0099827_11771572	Not Available	538	Open in IMG/M
3300009143\|Ga0099792_10029822	All Organisms → cellular organisms → Bacteria	2517	Open in IMG/M
3300010044\|Ga0126310_10179100	All Organisms → cellular organisms → Bacteria	1375	Open in IMG/M
3300010048\|Ga0126373_10999408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	902	Open in IMG/M
3300010048\|Ga0126373_12287105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	601	Open in IMG/M
3300010048\|Ga0126373_12801551	Not Available	544	Open in IMG/M
3300011269\|Ga0137392_10886618	Not Available	735	Open in IMG/M
3300011269\|Ga0137392_10990084	Not Available	691	Open in IMG/M
3300011270\|Ga0137391_11574794	Not Available	501	Open in IMG/M
3300011271\|Ga0137393_10608208	Not Available	937	Open in IMG/M
3300012096\|Ga0137389_10136123	Not Available	1997	Open in IMG/M
3300012096\|Ga0137389_11194674	Not Available	651	Open in IMG/M
3300012202\|Ga0137363_11519771	Not Available	561	Open in IMG/M
3300012205\|Ga0137362_10961328	Not Available	728	Open in IMG/M
3300012206\|Ga0137380_10056400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3599	Open in IMG/M
3300012206\|Ga0137380_11083246	Not Available	683	Open in IMG/M
3300012209\|Ga0137379_10254620	Not Available	1668	Open in IMG/M
3300012210\|Ga0137378_10892555	Not Available	802	Open in IMG/M
3300012211\|Ga0137377_11174661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300012211\|Ga0137377_11474499	Not Available	607	Open in IMG/M
3300012212\|Ga0150985_119248007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1422	Open in IMG/M
3300012349\|Ga0137387_10627201	Not Available	779	Open in IMG/M
3300012350\|Ga0137372_10768461	Not Available	693	Open in IMG/M
3300012353\|Ga0137367_10998741	Not Available	571	Open in IMG/M
3300012357\|Ga0137384_10298382	Not Available	1340	Open in IMG/M
3300012357\|Ga0137384_10299886	Not Available	1336	Open in IMG/M
3300012357\|Ga0137384_11024983	Not Available	663	Open in IMG/M
3300012357\|Ga0137384_11068656	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300012357\|Ga0137384_11507999	Not Available	521	Open in IMG/M
3300012359\|Ga0137385_10372187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1221	Open in IMG/M
3300012361\|Ga0137360_10206232	Not Available	1594	Open in IMG/M
3300012362\|Ga0137361_11530612	Not Available	589	Open in IMG/M
3300012363\|Ga0137390_10012894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7482	Open in IMG/M
3300012363\|Ga0137390_10244217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1781	Open in IMG/M
3300012363\|Ga0137390_10616262	Not Available	1052	Open in IMG/M
3300012363\|Ga0137390_11590315	Not Available	592	Open in IMG/M
3300012469\|Ga0150984_111104463	Not Available	700	Open in IMG/M
3300012582\|Ga0137358_10349281	Not Available	1002	Open in IMG/M
3300012582\|Ga0137358_10695800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	680	Open in IMG/M
3300012683\|Ga0137398_10896709	Not Available	618	Open in IMG/M
3300012683\|Ga0137398_10897831	Not Available	618	Open in IMG/M
3300012685\|Ga0137397_10766923	Not Available	716	Open in IMG/M
3300012917\|Ga0137395_10021176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3785	Open in IMG/M
3300012917\|Ga0137395_10524824	Not Available	854	Open in IMG/M
3300012917\|Ga0137395_10766661	Not Available	698	Open in IMG/M
3300012923\|Ga0137359_10440282	Not Available	1153	Open in IMG/M
3300012925\|Ga0137419_11802353	Not Available	524	Open in IMG/M
3300014052\|Ga0120109_1087295	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300014968\|Ga0157379_10431502	Not Available	1214	Open in IMG/M
3300015261\|Ga0182006_1218012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	629	Open in IMG/M
3300015357\|Ga0134072_10428649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	528	Open in IMG/M
3300016270\|Ga0182036_11023366	Not Available	681	Open in IMG/M
3300018433\|Ga0066667_11142183	Not Available	675	Open in IMG/M
3300018468\|Ga0066662_10407027	All Organisms → cellular organisms → Bacteria → Proteobacteria	1199	Open in IMG/M
3300018468\|Ga0066662_12116617	Not Available	590	Open in IMG/M
3300018482\|Ga0066669_10615592	Not Available	953	Open in IMG/M
3300018482\|Ga0066669_12194229	Not Available	524	Open in IMG/M
3300020199\|Ga0179592_10206081	Not Available	891	Open in IMG/M
3300025906\|Ga0207699_10261028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1197	Open in IMG/M
3300025910\|Ga0207684_10083356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2723	Open in IMG/M
3300025915\|Ga0207693_11017320	Not Available	632	Open in IMG/M
3300025916\|Ga0207663_11210342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	608	Open in IMG/M
3300025922\|Ga0207646_10645735	Not Available	948	Open in IMG/M
3300025926\|Ga0207659_10155939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1788	Open in IMG/M
3300025929\|Ga0207664_10107650	All Organisms → cellular organisms → Bacteria → Proteobacteria	2313	Open in IMG/M
3300025929\|Ga0207664_10818475	All Organisms → cellular organisms → Bacteria → Proteobacteria	837	Open in IMG/M
3300025929\|Ga0207664_11442391	All Organisms → cellular organisms → Bacteria → Proteobacteria	609	Open in IMG/M
3300026320\|Ga0209131_1274110	Not Available	645	Open in IMG/M
3300026550\|Ga0209474_10025644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	4484	Open in IMG/M
3300026550\|Ga0209474_10716435	Not Available	519	Open in IMG/M
3300027388\|Ga0208995_1057049	Not Available	687	Open in IMG/M
3300027546\|Ga0208984_1048090	Not Available	908	Open in IMG/M
3300027616\|Ga0209106_1062566	Not Available	833	Open in IMG/M
3300027663\|Ga0208990_1173653	Not Available	559	Open in IMG/M
3300027669\|Ga0208981_1010427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2354	Open in IMG/M
3300027846\|Ga0209180_10076697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1882	Open in IMG/M
3300027846\|Ga0209180_10102593	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	1631	Open in IMG/M
3300027862\|Ga0209701_10091011	Not Available	1914	Open in IMG/M
3300027875\|Ga0209283_10427391	All Organisms → cellular organisms → Bacteria → Proteobacteria	861	Open in IMG/M
3300027882\|Ga0209590_10117847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1610	Open in IMG/M
3300027903\|Ga0209488_10082895	All Organisms → cellular organisms → Bacteria → Proteobacteria	2387	Open in IMG/M
3300028536\|Ga0137415_10518135	Not Available	1001	Open in IMG/M
3300031057\|Ga0170834_105808250	Not Available	777	Open in IMG/M
3300031231\|Ga0170824_106729679	Not Available	787	Open in IMG/M
3300031231\|Ga0170824_120396550	Not Available	777	Open in IMG/M
3300031754\|Ga0307475_10582024	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300031941\|Ga0310912_11001548	Not Available	641	Open in IMG/M
3300031962\|Ga0307479_10783916	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300032001\|Ga0306922_11970331	Not Available	570	Open in IMG/M
3300032261\|Ga0306920_100897616	Not Available	1296	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.31%
Host-Associated	Host-Associated	7.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.31%
Plants	Host-Associated → Plants	7.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.10%
Roots	Host-Associated → Plants → Roots	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.23%
Loam	Environmental → Terrestrial → Soil → Loam	23.08%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.40%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.70%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.29%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.40%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.70%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.70%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.70%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	39.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.09%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.90%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.10%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.10%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.40%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.40%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.40%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.70%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.70%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.70%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.70%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.70%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014052	Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015261	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG	Host-Associated	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_100212826	3300001661	Forest Soil	MPLHQEAQFLRERARRLREIAGTYRTALSERLRDIAEELEGRADELERTDPSAD*
JGI12053J15887_101742765	3300001661	Forest Soil	MPLRREAQFLRDRARRLHEIAGVYQTALSQQLRAMAEELETRADELEREEPPSSP*
JGI12053J15887_102031331	3300001661	Forest Soil	MPLRREVQFLRDRARRLHEIAGVYQTALSQQLRAMAEELETRADELEREEPPSSP*
C688J35102_1179863431	3300002568	Soil	MPLRQEVQFLRERARRLREIAATYPTALSGQLRQMADELEARADEIEEERREHGSGG*
C688J35102_1208267292	3300002568	Soil	MPLRQEVQFLRERARRLREIAATYPTALSNQLREMADELETRANEIDQVRGADGSGG*
C688J35102_1208689783	3300002568	Soil	MPLRQEIKFLRDRARRLREMADTHRTALSDQLRVMAAELEAQADELERDRNQQPSGG*
Ga0063454_1000382953	3300004081	Soil	MPQVQFLRERARRLREIAATYPTALSNQLREMADELETRANEIDQVRGADGSGG*
Ga0063454_1001108282	3300004081	Soil	MPFRQEVQFLRHRARRLREMANSHRTALSAQLRRMASDLEARAEALQRDQEQQAGES*
Ga0062593_1006242471	3300004114	Soil	MPLRQEVRFLRERAQRLRQMAEAHQTALSDQLQMTANELEARAEELE
Ga0062593_1023236642	3300004114	Soil	MPFRQKVHFLRNRARRLREMANTHRTPLSDQLQKMATELEEQADDLEDQHRQSGC*
Ga0066671_110805861	3300005184	Soil	MPLRQEVQFLRERARRLREIAGSHATALSGQLRKMADELEARADEIENETKDDPSSG*
Ga0070683_1020432401	3300005329	Corn Rhizosphere	MPLRQEVQFLRDRARRLRELANAHRTALSDQLHALAHELEARADVLERAGLSDPNGC*
Ga0066388_1001863273	3300005332	Tropical Forest Soil	MPLRQEIQFLRNRARRLREMAEHQTPLSDRLKVIAAELEARADDLEQAQDKPQGDS*
Ga0066388_1003208634	3300005332	Tropical Forest Soil	MPLRQEIQFLRERARRLREIAATHRTALSDQLRQMADELEARANEIEQETRGDGSDC*
Ga0066388_1040105211	3300005332	Tropical Forest Soil	MPLRQEIRFLRDRARRLREMAEHQTPLSDRLKVMAAELEARADDLERDGQAGGSQG*
Ga0070671_1004228182	3300005355	Switchgrass Rhizosphere	MPLRQEVRFLRERAQRLRQMAEAHQTALSDQLQMMAYELEARADELERARVIENGGPSSSSS*
Ga0008090_136101432	3300005363	Tropical Rainforest Soil	MPLRQEVQFLRDRARRLREMAKPQTPLSDQLRMMAEELEARADNLERAQPP*
Ga0070673_1002866653	3300005364	Switchgrass Rhizosphere	MPLRQEVQFLRDRARRLRAMAETHRTALSDQLHALAHELDARADVLERAGITDAGITDT
Ga0070659_1018476061	3300005366	Corn Rhizosphere	MPLRQEVRFLREHAQRLRQMAEAHQTALSDQLQMMACELEARTDELERAQAMEIS*
Ga0070709_117152202	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	QEAQFLRQRARRLREMAIAHQTGLSDQLLMMAEELEVRADQLEKANPPDGGDHLVQSN*
Ga0070714_1002494482	3300005435	Agricultural Soil	MPLRHEVQFLRERARRLREIAASHPTALSGQLRQMAEELEARAEEIERETGSDAPGA*
Ga0070706_1001904362	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRQEAQFLRERARRLREIAGAYRTALSQQLRVMAEELEARADELEQANRAAD*
Ga0070706_1018745491	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRQEVRFLRERARRLREMAEAHQTALSDQLRMMAHELEARADELE
Ga0070707_1009215462	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRQEPHFLRERARRLRDIAGTHQTPLSERLGEIAEEMEGRADELENGKPTD*
Ga0070698_1005915672	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRQEPHFLRERARRLRDIAGTHQTPLSERLREIAEEMEGRADELENGKPTD*
Ga0070739_100783184	3300005532	Surface Soil	MPAHREVQFLRERAKRLRDMASLHQTPLSDQLRLLAHELESRADELEHGGSD
Ga0070735_100813673	3300005534	Surface Soil	MPLRQEVQFLRDRARRLREMAAQRTPLSDHLRTMAHELDARADELERTGDRAPTNQKPPA
Ga0066705_105688362	3300005569	Soil	NMPLRQEVQFLRERARRLREIAGSHATALSGQLRKMADELETRADEIENETKDDPSSG*
Ga0066694_101972711	3300005574	Soil	MPLRQEVRFLRERAQRLRQMAEAHQTALSDQLQMMAYELETRADELERARVIENGGSASS
Ga0066708_100423744	3300005576	Soil	MPLRQEVRFLRERAQRLRQMAEAHHTALSDQLQMMAYELEARADELERARVSREWRFLVVVI*
Ga0066654_105806121	3300005587	Soil	MPLRQEVRFLRERAQRLRQMAEAHQTALSDQLQMMAYELETRADELERARVIDDGDSSSS
Ga0066706_113975112	3300005598	Soil	MPRRREVQFLRERARRLREMADEYQTALSDRLRMIAHELEAQADDVERGGG
Ga0068858_1018121051	3300005842	Switchgrass Rhizosphere	KVHFLRNRARRLREMANTHRTPLSDQLQKMATELEEQADDLEDQHRQSGC*
Ga0070717_102778433	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRQEVQFLRERARRLREIAASHPTRLSGQLRKMAEELEARADEIENETKGDASDC*
Ga0070717_118636582	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LDKHMPLRQEVRFLRERAQRLREMAEAHQTALSDQLRMMAHELEARADELERPGFIDNGDGSP*
Ga0066651_103684852	3300006031	Soil	MPLRQEVQFLRERARRLREIAGSHATALSGQLRKMADELEARADEIENETKGDASSG*
Ga0066696_101049693	3300006032	Soil	MPLRQEVQFLRERAQRLRKMANAYRTALSNQLRALADELEARADELERDGPDNSASA*
Ga0066652_1010580432	3300006046	Soil	MPLRQEVQFLRERARRLREIAGSHATALSGQLRKMADELEARADEMENETKDDPSSG*
Ga0066652_1015200442	3300006046	Soil	MPISQEAKFLRERAKRLRDMAAPRTPLSPQLRALAKELEARADQLEHDNKKRGVK*
Ga0068871_1019756124	3300006358	Miscanthus Rhizosphere	RQKVHFLRNRARRLREMANTHRTPLSDQLQKMATELEEQADDLEDQHRQSGC*
Ga0066660_108524832	3300006800	Soil	MPLRQEAQFLRERARRLREMADEYQTALSDRLRMIAHELEVQADDVERGGLTDNGDGSP*
Ga0079220_108796451	3300006806	Agricultural Soil	MPLRQEVRFLRERAQRLRQMAEAHQTALSDQLHMMASELEARADELERARVIENGGSSSP
Ga0079219_112208351	3300006954	Agricultural Soil	MPLRQEVRFLRERAQRLPQMAEAHQTALSDQLHMMASELEARADELERARVIENGGSS
Ga0099791_105554051	3300007255	Vadose Zone Soil	MPLRREVQFLRERARRLREMADEYRTALSDRLRMIAHELEARADDIERSRPTDNGGGSP*
Ga0099795_102338732	3300007788	Vadose Zone Soil	MPLRREAQFLRDRARRLHEIAGVYQTALSQQLRAMAEELEARADELERDEPPNSP*
Ga0066710_1021064601	3300009012	Grasslands Soil	MPLRREVQVLRERARRLREMADENQTPLSDRLRAMAHELEARADNLA
Ga0099829_102421471	3300009038	Vadose Zone Soil	MPLRQEVQFLRERARRLREMANEYQTALSDRLRMIAHELEARADDLERSRLTDNGSSP*
Ga0099829_103413223	3300009038	Vadose Zone Soil	MPLRQEVQFLRERARRLREMADEYQTAMSDRLRMMAHELEGRADELERAGLIDNGAPGAS
Ga0099829_105398211	3300009038	Vadose Zone Soil	MPLRREVQFLRERAQRLREMADENQTALSDRLRMIAHELEARADDIERAESRS*
Ga0099828_101977201	3300009089	Vadose Zone Soil	MPLRREVQFLRERAQRLREMADEHQTALSDRLRMIAHELEARADDLERAGLTGE*
Ga0099827_105628353	3300009090	Vadose Zone Soil	MPLRREVQFLRERAQRLREMADENQTALSDRLRTIAHELEARADDLERAESRS*
Ga0099827_117715721	3300009090	Vadose Zone Soil	MPLRQEVPFLRDRARRLREMADEYQTALSDRVRMIAHELEARADELERTGRIDDGSRSAP
Ga0099792_100298225	3300009143	Vadose Zone Soil	MPLRREAQFLRGRARRLHEIAGVYQTALSQQLRAMAEELDELEREQPPNSP*
Ga0126310_101791003	3300010044	Serpentine Soil	MPLRQEIQFLRERARRLREIAGSHATALSGQLRKMAEELEARADEIENETKGEAPSR*
Ga0126373_109994082	3300010048	Tropical Forest Soil	MPTREIPFLRERAQRLRAMAAQPTPLSEHLRMMAAELEARADELERDRPTDTA*
Ga0126373_122871052	3300010048	Tropical Forest Soil	MPLRHEIQFLRERARRLREIAATHRTALSDQLRQMADELEARANEIEQETRGDGSDC*
Ga0126373_128015512	3300010048	Tropical Forest Soil	MLLRQEIQFLRDRARRLREMAEHQTPLSDRLKVMAAELEARADDLERDGQVCGS*
Ga0126381_1046399131	3300010376	Tropical Forest Soil	MPLRQEIQFLRNRARRLREMAEHQTPLSDRLKVMAAELEA
Ga0137392_108866181	3300011269	Vadose Zone Soil	MPLRQEVQFLRERARRLREMANEYQTALSDRLRMIAHELEARADDLERS
Ga0137392_109900841	3300011269	Vadose Zone Soil	MPLRREVQFLRQRARRLREMADEYQTALSDWLRMIAHELEAQADDIERGGL
Ga0137391_115747942	3300011270	Vadose Zone Soil	LRREVQFLRERAQRLREMADENQTALSDRLRMIAHELEARADGLERAE*
Ga0137393_106082083	3300011271	Vadose Zone Soil	MPLRREVQFLRERAQRLREMADENQTALSDRLRMIAHELEAQADDLERAE*
Ga0137389_101361235	3300012096	Vadose Zone Soil	MPLRREVQFLRERARRLREMADENQTALSDRLRMIAHELEAQADDLERAE*
Ga0137389_111946744	3300012096	Vadose Zone Soil	MPLRQEVQFLRERARRLREMANEYQTALSDRLRMIAHELEARADDLERSRLTDNG
Ga0137363_115197712	3300012202	Vadose Zone Soil	MPLRREAQFLRDRARRLHEIAGVYQTALSQQLRAMAEELDELEREQPPNSP*
Ga0137362_109613282	3300012205	Vadose Zone Soil	MPPSQEVQFLRERARRLREMADEYQTALSDRLRVIAHELEAQADEIERAG
Ga0137380_100564008	3300012206	Vadose Zone Soil	EVPFLRERARRLREMADEHQTALSDRLRMMAHELEARADELERTDLIDDGSRGAS*
Ga0137380_110832461	3300012206	Vadose Zone Soil	MPLRREVQFLRERARRLREMADEHQTALSDRLRTVAHELEARADDLERAGLTDNGPSLYPR*
Ga0137379_102546203	3300012209	Vadose Zone Soil	MPLRQEVQFLRERARRLREMAEENQTALSDRLRMIAHELEARADNIERAGFTE*
Ga0137378_108925552	3300012210	Vadose Zone Soil	MPLRRQVQFLRERAKRLREMADENQTALSDRLRMMAHELEAQADDLERAGLTDNGDGSP*
Ga0137377_111746612	3300012211	Vadose Zone Soil	MPLRQEVLFLRERARRLREMADEHQTALSDRLRMMAHELEARADELERTDLIDDGSRGAS
Ga0137377_114744991	3300012211	Vadose Zone Soil	MPLRRQVQFLRERAKRLREMADEYQTALSDRLRMIAHELEAQADDIERGGGDGSP*
Ga0150985_1192480071	3300012212	Avena Fatua Rhizosphere	MPFRQEVQFLRHRARRLREMANSHRTALSDQLRRMASDLEARAEALQRDQEQQAGES*
Ga0137387_106272013	3300012349	Vadose Zone Soil	MPLRQEVPFLRERARRLREMADEHQTALSDRLRMMAHELEARADDLERTGLTGQ*
Ga0137372_107684612	3300012350	Vadose Zone Soil	MPLRQEVHFLRERAQRLREMADENPTALSDRLRALAHELEARADNLERVRPTDDRP*
Ga0137367_109987412	3300012353	Vadose Zone Soil	MPLRRQVRFLRERAKRLREMADEYQTALSDRLRMIAHELEAQADELERAGLIDNGGGSP*
Ga0137384_102983822	3300012357	Vadose Zone Soil	MPLRQEVQFLQGRARRLREMAEENQTALSDRLRMIAHELEARADNIERAGFTE*
Ga0137384_102998862	3300012357	Vadose Zone Soil	MPLRREVQFLRERARRLREMADEYQTALSDRLRMIAHELEARADDIERSRPTDNGGGSP*
Ga0137384_110249832	3300012357	Vadose Zone Soil	MPLRRQVQFLRERAKRLREMADENQTALSDRLRMMAHELEARGDELERAGPIDDNGSA*
Ga0137384_110686561	3300012357	Vadose Zone Soil	EVQFLRERARRLREMADEYQTALSDRLRMIAHELEAQADDIERSRPTDNGGGSP*
Ga0137384_115079992	3300012357	Vadose Zone Soil	MPFRQEVQFLRERARRLREMADENLTALSDRLRAMAHELEARADNLEGDILPGA*
Ga0137385_103721873	3300012359	Vadose Zone Soil	ARILMPLRREVQFLRERARRLREMADEYQTALSDRLRMIAHELEAQADELERAGLIDNGGGSP*
Ga0137360_102062324	3300012361	Vadose Zone Soil	MPLRQEVQFLRERARRLRAMAGKNQTALSDRLRMIAHELEARADDIERAGFTE*
Ga0137361_115306121	3300012362	Vadose Zone Soil	MPFRREVQFLRERARRLREMADEYRTALSDRLRMIAHELEARADDIERSRPTDNGGGSP*
Ga0137390_100128948	3300012363	Vadose Zone Soil	MPLRQEVRFLRERAWRLREMADSHQTALSDQLRMMAHELEARADELERTGFIDDGGQSP*
Ga0137390_102442173	3300012363	Vadose Zone Soil	MPLRREVQFLRERAQRLREMADENQTALSDRLRMIAHELEAQAGDLERAE*
Ga0137390_106162621	3300012363	Vadose Zone Soil	MPLRREVQFLRQRAKRLREMADEYPTALSDRLRMIAHELEAQADDLERPALTDNGDGSP*
Ga0137390_115903152	3300012363	Vadose Zone Soil	MPLRREVQFLRQRARRLREMADEYQTALSDRLRMIAHELEAQADDIERGGLTDNGDGSP*
Ga0150984_1111044632	3300012469	Avena Fatua Rhizosphere	MPFRHEVQFLRDRARRLREVANSHRTALSDQLRRMASDLEARAEALQRDQEQQAGES*
Ga0137358_103492811	3300012582	Vadose Zone Soil	MPLRREAQFLRGRARRLHEIAGVYQTALSQQLRAMAEELEARADELERAEPPSSP*
Ga0137358_106958004	3300012582	Vadose Zone Soil	PLRQEVPFLRERAPRLREMADENQTALSDRLRMIAHELEARADELERTGLIDDGSRGAS*
Ga0137398_108967092	3300012683	Vadose Zone Soil	MPLRQEAQFLRERARRLREIAGAYQTALSQQLREMAAELETRADELEKAKPAK*
Ga0137398_108978311	3300012683	Vadose Zone Soil	MPLRREAQFLRDRARRLHEIAGVYQTALSQQLRAMAEELEARADELERAEPPSSP*
Ga0137397_107669231	3300012685	Vadose Zone Soil	MPLRREAQFLRGRARRLHEIAGVYQTALSQQLRAMAEELEARADELEREQPPNSP*
Ga0137395_100211761	3300012917	Vadose Zone Soil	MPLRREVQFLRERARRLREMADEYQTALSDRLRMIAHELEARAEDLERTGLTRQ*
Ga0137395_105248241	3300012917	Vadose Zone Soil	RREAQFLRDKARRLHEIAGVYQTALSQQLRAMAEELETRADELEREEPPSSP*
Ga0137395_107666612	3300012917	Vadose Zone Soil	LSQHMPLRQEAQFLTERARRLREIAGTYRTALSERLRDIAEELEGRADELERTDPSDD*
Ga0137359_104402822	3300012923	Vadose Zone Soil	MPLRQEAQFLRERARRLREIAGTYRTALSERLRDIAEELEGRADELERTDPSAD*
Ga0137419_118023531	3300012925	Vadose Zone Soil	MPLRREVQFLRERAQRLREMADENQTALFDRLRMIAHELEARADDLERAE*
Ga0120109_10872953	3300014052	Permafrost	MPLRQETRFLRERAQRLREIATARRTVLSEQLRAIARELEARADELEKGM
Ga0157379_104315021	3300014968	Switchgrass Rhizosphere	MPLRQEVHFLRERARRLREMADAYRTALSDQLRTLAHELEARADELERVGLSNGQG*
Ga0182006_12180122	3300015261	Rhizosphere	EKHMPLRQEVRFLRERAQRLRQMAEAHQTALSDQLQMMAYELEARADELERARVIENGGPSSSSS*
Ga0134072_104286492	3300015357	Grasslands Soil	MPLRQEVQFLRERARRLREIAATYPTALSDQLRQMADELEARANEIEEERREHGSGG*
Ga0132255_1004233781	3300015374	Arabidopsis Rhizosphere	MPFRQKVHFLRNRARRLREMANTHRTPLSDQLQKMATELE
Ga0182036_110233661	3300016270	Soil	RTDRAPSMPTREIPFLRERAQRLRAMAAQPTPLSQHLRMMAAELEARADELERDRPTDTA
Ga0066667_111421831	3300018433	Grasslands Soil	MPLRQEVQFLRERARRLRQMAAAYRTALSSQLQRLAEELEARADELERASPGDSGSP
Ga0066662_104070273	3300018468	Grasslands Soil	MPLRHEVQFLRERARRLREIAASHPTALSGQLRQMAEELEARADEIERETGGDAPRC
Ga0066662_121166171	3300018468	Grasslands Soil	MPLRQEAQFLRERARRLREIAGAYQTVLSQQLREMAADLETRADELEKANPPSE
Ga0066669_106155921	3300018482	Grasslands Soil	MPLRRQVQFLRERAKRLREMADENQTALSDRLRMMAHELEAQADDLER
Ga0066669_121942291	3300018482	Grasslands Soil	MPPRREVQFLRERARRLREMADENQTPLSDRLRMMSHELEARAEELQRAGLIEDDDWFTVATAGTR
Ga0179592_102060812	3300020199	Vadose Zone Soil	MPLRQEAQFLRERARRLREIAGTYRTALSERLRDIAEELEGRADELERTDPSAD
Ga0207699_102610282	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRQEVRFLRERAQRLRQMAEAHQTALSDQLQMMAHELEARADELQRARVIENGGSSSS
Ga0207684_100833561	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MVPVCLSKHMPLRQEAQFLRERARRLREIAGAYRTALSQQLRVMAEELEARADELEQANRAAD
Ga0207693_110173201	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRQEAQFLRQRARRLQEMATAHQTALSDQLLTMAEELEARADQLEKANPPDGGDHPLQSN
Ga0207663_112103421	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LRQEVRFLRERAQRLRQMAESHQTALSDQLHMMASELEARADELERALVIENGGSSSP
Ga0207646_106457351	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRQEPHFLRERARRLRDIAGTHQTPLSERLGEIAEEMEGRADELENGKPTD
Ga0207659_101559395	3300025926	Miscanthus Rhizosphere	MPFRQKVHFLRNRARRLREMANTHRTPLSDQLQKMATELEEQADDLEDQHRQSGC
Ga0207664_101076503	3300025929	Agricultural Soil	MPLRHEVQFLRERARRLREIAASHPTALSGQLRQMAEELEARAEEIERETGSDAPGA
Ga0207664_108184751	3300025929	Agricultural Soil	MPLRQEVRFLRERAQRLRQMAEAHQTALSDQLQMMAYELEARADELERARVIENGGPSSS
Ga0207664_114423911	3300025929	Agricultural Soil	MPLRQEVRFLRERAQRLRQMAEAHQTALSDQLQMMAHELEARADELQRARVI
Ga0209131_12741101	3300026320	Grasslands Soil	MPLRREAQFLRDRARRLHEIAGVYQTALSQQLRAMAEELEARADELERAEPPSSP
Ga0209474_100256445	3300026550	Soil	MPLRQEVQFLRERARRLREIAGSHATALSGQLRKMADELEARADEIENETKGDASSG
Ga0209474_107164351	3300026550	Soil	MPLRQEVQFLRERAQRLRKMANAYRTALSNQLRALADELEARADELERDGPDNSASA
Ga0208995_10570492	3300027388	Forest Soil	MPLRREVQFLRDRARRLHEIAGVYQTALSQQLRAMAEELETRADELEREEPPSSP
Ga0208984_10480902	3300027546	Forest Soil	MPLRREAQFLRDRARRLHEIAGVYQTALSQQLRAMAEELEARADELEREEPPNS
Ga0209106_10625662	3300027616	Forest Soil	MPLRREAQFLRDRARRLHEIAGVYQTALSQQLRAMAEELEARADELEREEPPSSP
Ga0208990_11736531	3300027663	Forest Soil	MPLRREAQFLRDRARRLHEIAGVYQTALSQQLRAMAEELDELEREQPPNSP
Ga0208981_10104276	3300027669	Forest Soil	MPLHQEAQFLRERARRLREIAGTYRTALSERLRDIAEELEGRADELERTDPSAD
Ga0209180_100766972	3300027846	Vadose Zone Soil	MPLRREVQFLRERARRLREMADENQTALSDRLRMMAHELEARADELERAGLTE
Ga0209180_101025932	3300027846	Vadose Zone Soil	MPLRQEVQFLRERARRLRDMADEYQTAMSDRLRMMAHELEGRADELERAGLIDNGAPGAS
Ga0209701_100910114	3300027862	Vadose Zone Soil	MPLRREVQFLRERARRLREMADENQTALSDRLRMMAHELEARADDLERAGLIDDDGPC
Ga0209283_104273913	3300027875	Vadose Zone Soil	MPLRQEVQFLRERARRLREMADEYQTAMSDRLRMMAHELEGRADELERAGLIDNDPPGAS
Ga0209590_101178473	3300027882	Vadose Zone Soil	MPLRRQVQFLRERAKRLREMADEYQTALSDRLRMIAHELEAQADELERAGLIDNGGGSP
Ga0209488_100828952	3300027903	Vadose Zone Soil	MPLRQEVQFLRERARRLREIAGSHATALSGQLRKMADELEARADEMENETKDDPSSG
Ga0137415_105181352	3300028536	Vadose Zone Soil	MPLRREAQFLRDRARRLHEIAGVYQTALSQQLRAMAEELEARADELERDEPPNSP
Ga0170834_1058082502	3300031057	Forest Soil	MPLSHEVQFLRERARRLREIAASHRTALSGQLRKMAEELEARANEIEQEPDDHAAPY
Ga0170824_1067296792	3300031231	Forest Soil	MPFRQEIKFLRDRARRLREMAQNRTPLSDQLTVMAADLESQADELQRNQDQQPSD
Ga0170824_1203965501	3300031231	Forest Soil	TGFSKHIFWLRENMPLSHEVQFLRERARRLREIAASHRTALSGQLRKMAEELEARANEIEQEPDDHAAPY
Ga0307475_105820242	3300031754	Hardwood Forest Soil	MPLRQEVQFLRERARREIAASHPTRLSGQLRKMAEELEARADEIENETKGDASDC
Ga0310912_110015482	3300031941	Soil	MPLRQEVQFLRDRARRLREMAKPQTPLSDQLRMMAEELEARADELERAQPSR
Ga0307479_107839162	3300031962	Hardwood Forest Soil	MPLRQEVQFLRERARRLREIAASHPTRLSGQLRKMAEELEARADEIENETKGDASDC
Ga0306922_119703311	3300032001	Soil	KPSMPLRQEVQFLRDRARRLREMAKPQTPLSDQLRMMAEELESRADELERAQPSR
Ga0306920_1008976165	3300032261	Soil	MPLRQEVQFLRDRARRLREMAKPQTPLSDQLRMMAEELEARADELERAQRSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051954

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences