Metagenome / Metatranscriptome Family F051942

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051942
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	42 residues
Representative Sequence	TRVNDLIRVVTLHATVMASGSLTYLVGCGIASNDSYQVSYL
Number of Associated Samples	107
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.13 %
% of genes near scaffold ends (potentially truncated)	96.50 %
% of genes from short scaffolds (< 2000 bps)	90.21 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.832 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine (37.762 % of family members)
Environment Ontology (ENVO)	Unclassified (71.329 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (98.601 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 53.62% β-sheet: 0.00% Coil/Unstructured: 46.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF08238	Sel1	4.20
PF05721	PhyH	3.50
PF11746	DUF3303	2.80
PF00805	Pentapeptide	2.80
PF06610	AlaE	2.10
PF00892	EamA	2.10
PF01323	DSBA	2.10
PF08547	CIA30	2.10
PF01757	Acyl_transf_3	1.40
PF00239	Resolvase	1.40
PF02796	HTH_7	0.70
PF02535	Zip	0.70
PF01638	HxlR	0.70
PF03992	ABM	0.70
PF07045	DUF1330	0.70
PF13302	Acetyltransf_3	0.70
PF00533	BRCT	0.70
PF00903	Glyoxalase	0.70
PF13472	Lipase_GDSL_2	0.70
PF00816	Histone_HNS	0.70
PF03349	Toluene_X	0.70
PF13488	Gly-zipper_Omp	0.70
PF00583	Acetyltransf_1	0.70
PF02608	Bmp	0.70
PF13847	Methyltransf_31	0.70
PF01037	AsnC_trans_reg	0.70
PF11086	DUF2878	0.70
PF04011	LemA	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	3.50
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	2.80
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.40
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.40
COG0428	Zinc transporter ZupT	Inorganic ion transport and metabolism [P]	0.70
COG1704	Magnetosome formation protein MamQ, lipoprotein antigen LemA family	Cell wall/membrane/envelope biogenesis [M]	0.70
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.70
COG1744	Lipoprotein Med, regulator of KinD/Spo0A, PBP1-ABC superfamily, includes NupN	Signal transduction mechanisms [T]	0.70
COG2067	Long-chain fatty acid transport protein	Lipid transport and metabolism [I]	0.70
COG2916	DNA-binding protein H-NS	Transcription [K]	0.70
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.23 %
Unclassified	root	N/A	30.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.83 %
Unclassified	root	N/A	30.77 %
Viruses	superkingdom	All Organisms → Viruses	1.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.83 %
Unclassified	root	N/A	30.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.40 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	65.03 %
Unclassified	root	N/A	30.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.40 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	51.75 %
Unclassified	root	N/A	30.77 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	10.49 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.40 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	41.26 %
Unclassified	root	N/A	30.77 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	9.09 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	1.40 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.40 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.70 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.77 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	23.78 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	9.79 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	9.09 %
Oceanospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae	1.40 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.40 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.70 %
Nitrosomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.77 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	9.09 %
Roseobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter	4.90 %
unclassified Rhodobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae	2.80 %
Planktomarina	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Planktomarina	2.10 %
Nereida	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Nereida	2.10 %
Planktotalea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Planktotalea	1.40 %
Marinobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Marinobacterium	1.40 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.40 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.70 %
unclassified Nitrosomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → unclassified Nitrosomonadaceae	0.70 %
Marinovum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum	0.70 %
Leisingera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Leisingera	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.77 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	9.09 %
unclassified Roseobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter	4.90 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	2.80 %
Nereida ignava	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Nereida → Nereida ignava	2.10 %
Planktotalea frisia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Planktotalea → Planktotalea frisia	1.40 %
unclassified Marinobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Marinobacterium → unclassified Marinobacterium	1.40 %
Planktomarina temperata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Planktomarina → Planktomarina temperata	1.40 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.40 %
unclassified Marinovum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum	0.70 %
unclassified Leisingera	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Leisingera → unclassified Leisingera	0.70 %
Nitrosomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → unclassified Nitrosomonadaceae → Nitrosomonadaceae bacterium	0.70 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.77 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	9.09 %
Roseobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	2.80 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	2.80 %
Roseobacter sp. LE17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	2.10 %
Nereida ignava	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Nereida → Nereida ignava	2.10 %
Marinobacterium sp. xm-g-59	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Marinobacterium → unclassified Marinobacterium → Marinobacterium sp. xm-g-59	1.40 %
Planktotalea frisia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Planktotalea → Planktotalea frisia	1.40 %
Planktomarina temperata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Planktomarina → Planktomarina temperata	1.40 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.40 %
Marinovum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.	0.70 %
Leisingera sp. ANG-M1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Leisingera → unclassified Leisingera → Leisingera sp. ANG-M1	0.70 %
Nitrosomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → unclassified Nitrosomonadaceae → Nitrosomonadaceae bacterium	0.70 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001347\|JGI20156J14371_10075478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1216	Open in IMG/M
3300001351\|JGI20153J14318_10066980	Not Available	1169	Open in IMG/M
3300001352\|JGI20157J14317_10164331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	673	Open in IMG/M
3300001352\|JGI20157J14317_10172251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Planktomarina → Planktomarina temperata	647	Open in IMG/M
3300003410\|JGI26086J50260_1017598	All Organisms → cellular organisms → Bacteria → Proteobacteria	2302	Open in IMG/M
3300003620\|JGI26273J51734_10064718	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300004279\|Ga0066605_10137231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Nereida → Nereida ignava	981	Open in IMG/M
3300005239\|Ga0073579_1108185	Not Available	968	Open in IMG/M
3300005837\|Ga0078893_11501410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1590	Open in IMG/M
3300005942\|Ga0070742_10167456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	612	Open in IMG/M
3300005942\|Ga0070742_10203737	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300006404\|Ga0075515_10929644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	899	Open in IMG/M
3300006850\|Ga0075491_1532475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1063	Open in IMG/M
3300007554\|Ga0102820_1051182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	1001	Open in IMG/M
3300007557\|Ga0102821_1010745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	2562	Open in IMG/M
3300007653\|Ga0102868_1175131	Not Available	519	Open in IMG/M
3300007692\|Ga0102823_1053570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1079	Open in IMG/M
3300007981\|Ga0102904_1059742	Not Available	872	Open in IMG/M
3300008012\|Ga0075480_10591331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	526	Open in IMG/M
3300009055\|Ga0102905_1126344	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300009071\|Ga0115566_10243129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1081	Open in IMG/M
3300009071\|Ga0115566_10517916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Planktotalea → Planktotalea frisia	675	Open in IMG/M
3300009074\|Ga0115549_1089199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1042	Open in IMG/M
3300009076\|Ga0115550_1214453	Not Available	643	Open in IMG/M
3300009076\|Ga0115550_1236174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → unclassified Nitrosomonadaceae → Nitrosomonadaceae bacterium	603	Open in IMG/M
3300009193\|Ga0115551_1110950	Not Available	1280	Open in IMG/M
3300009193\|Ga0115551_1219710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	848	Open in IMG/M
3300009422\|Ga0114998_10232003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Marinobacterium → unclassified Marinobacterium → Marinobacterium sp. xm-g-59	872	Open in IMG/M
3300009423\|Ga0115548_1061282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1305	Open in IMG/M
3300009426\|Ga0115547_1227113	Not Available	585	Open in IMG/M
3300009433\|Ga0115545_1076838	Not Available	1237	Open in IMG/M
3300009433\|Ga0115545_1216754	Not Available	649	Open in IMG/M
3300009435\|Ga0115546_1120668	Not Available	940	Open in IMG/M
3300009437\|Ga0115556_1248192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	633	Open in IMG/M
3300009437\|Ga0115556_1344567	Not Available	523	Open in IMG/M
3300009438\|Ga0115559_1239405	Not Available	646	Open in IMG/M
3300009442\|Ga0115563_1024984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	3184	Open in IMG/M
3300009442\|Ga0115563_1124139	Not Available	1068	Open in IMG/M
3300009443\|Ga0115557_1290945	Not Available	617	Open in IMG/M
3300009445\|Ga0115553_1427738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	500	Open in IMG/M
3300009447\|Ga0115560_1385495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	531	Open in IMG/M
3300009467\|Ga0115565_10069372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	1692	Open in IMG/M
3300009476\|Ga0115555_1134476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Nereida → Nereida ignava	1045	Open in IMG/M
3300009495\|Ga0115571_1182940	Not Available	864	Open in IMG/M
3300009495\|Ga0115571_1443017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	501	Open in IMG/M
3300009496\|Ga0115570_10292094	Not Available	708	Open in IMG/M
3300009496\|Ga0115570_10292427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	708	Open in IMG/M
3300009496\|Ga0115570_10377573	Not Available	604	Open in IMG/M
3300009496\|Ga0115570_10397034	Not Available	586	Open in IMG/M
3300009498\|Ga0115568_10357671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	637	Open in IMG/M
3300009505\|Ga0115564_10058878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	2259	Open in IMG/M
3300009505\|Ga0115564_10071867	Not Available	1991	Open in IMG/M
3300009505\|Ga0115564_10181314	Not Available	1109	Open in IMG/M
3300009505\|Ga0115564_10265950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Planktotalea → Planktotalea frisia	869	Open in IMG/M
3300009505\|Ga0115564_10569098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	538	Open in IMG/M
3300009507\|Ga0115572_10387522	Not Available	783	Open in IMG/M
3300009507\|Ga0115572_10715409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300009508\|Ga0115567_10296278	Not Available	1016	Open in IMG/M
3300009512\|Ga0115003_10427859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	777	Open in IMG/M
3300010368\|Ga0129324_10352610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	572	Open in IMG/M
3300010368\|Ga0129324_10402713	Not Available	528	Open in IMG/M
3300012524\|Ga0129331_1304365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Planktomarina	559	Open in IMG/M
3300016745\|Ga0182093_1580395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Planktomarina → Planktomarina temperata	1195	Open in IMG/M
3300017697\|Ga0180120_10095521	Not Available	1296	Open in IMG/M
3300017697\|Ga0180120_10181583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	879	Open in IMG/M
3300017950\|Ga0181607_10583843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	589	Open in IMG/M
3300018420\|Ga0181563_10118338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	1707	Open in IMG/M
3300020165\|Ga0206125_10198010	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300020166\|Ga0206128_1039856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	2387	Open in IMG/M
3300020166\|Ga0206128_1344809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	516	Open in IMG/M
3300020173\|Ga0181602_10015249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	4997	Open in IMG/M
3300020175\|Ga0206124_10045663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1951	Open in IMG/M
3300020175\|Ga0206124_10160330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	902	Open in IMG/M
3300020177\|Ga0181596_10116930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1304	Open in IMG/M
3300020182\|Ga0206129_10097819	Not Available	1554	Open in IMG/M
3300020185\|Ga0206131_10317450	Not Available	688	Open in IMG/M
3300020187\|Ga0206130_10055659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	2738	Open in IMG/M
3300020187\|Ga0206130_10165451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Nereida → Nereida ignava	1125	Open in IMG/M
3300020187\|Ga0206130_10201922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	955	Open in IMG/M
3300020188\|Ga0181605_10057783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	2143	Open in IMG/M
3300020188\|Ga0181605_10071759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1850	Open in IMG/M
3300020188\|Ga0181605_10084509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	1653	Open in IMG/M
3300020810\|Ga0181598_1048830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	2083	Open in IMG/M
3300021365\|Ga0206123_10157047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1038	Open in IMG/M
3300021373\|Ga0213865_10522415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	503	Open in IMG/M
3300021389\|Ga0213868_10217478	All Organisms → Viruses → Predicted Viral	1135	Open in IMG/M
3300021959\|Ga0222716_10485406	All Organisms → cellular organisms → Bacteria → Proteobacteria	698	Open in IMG/M
3300022921\|Ga0255765_1005066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	12684	Open in IMG/M
3300022928\|Ga0255758_10107286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1462	Open in IMG/M
3300022928\|Ga0255758_10294423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	694	Open in IMG/M
3300022929\|Ga0255752_10104602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	1528	Open in IMG/M
3300022929\|Ga0255752_10106326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1509	Open in IMG/M
3300023273\|Ga0255763_1057327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1948	Open in IMG/M
3300023273\|Ga0255763_1130280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1086	Open in IMG/M
3300024247\|Ga0228675_1046603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	931	Open in IMG/M
(restricted) 3300024264\|Ga0233444_10364171	Not Available	606	Open in IMG/M
3300024417\|Ga0228650_1027042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1732	Open in IMG/M
3300024508\|Ga0228663_1103539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300025617\|Ga0209138_1012949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4259	Open in IMG/M
3300025617\|Ga0209138_1070880	Not Available	1132	Open in IMG/M
3300025617\|Ga0209138_1117713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	742	Open in IMG/M
3300025621\|Ga0209504_1109667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	709	Open in IMG/M
3300025626\|Ga0209716_1053080	Not Available	1325	Open in IMG/M
3300025632\|Ga0209194_1054360	Not Available	1134	Open in IMG/M
3300025641\|Ga0209833_1118792	Not Available	736	Open in IMG/M
3300025654\|Ga0209196_1168550	Not Available	590	Open in IMG/M
3300025680\|Ga0209306_1106717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	827	Open in IMG/M
3300025685\|Ga0209095_1061046	Not Available	1308	Open in IMG/M
3300025695\|Ga0209653_1083956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1076	Open in IMG/M
3300025696\|Ga0209532_1103146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	972	Open in IMG/M
3300025699\|Ga0209715_1079736	Not Available	1272	Open in IMG/M
3300025699\|Ga0209715_1185436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	666	Open in IMG/M
3300025701\|Ga0209771_1094886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.	999	Open in IMG/M
3300025704\|Ga0209602_1188770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	623	Open in IMG/M
3300025767\|Ga0209137_1139644	Not Available	898	Open in IMG/M
3300025806\|Ga0208545_1037224	All Organisms → cellular organisms → Bacteria → Proteobacteria	1522	Open in IMG/M
3300025809\|Ga0209199_1049498	All Organisms → Viruses → Predicted Viral	2087	Open in IMG/M
3300025809\|Ga0209199_1078961	Not Available	1445	Open in IMG/M
3300025809\|Ga0209199_1158398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	836	Open in IMG/M
3300025816\|Ga0209193_1033461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1521	Open in IMG/M
3300025816\|Ga0209193_1048189	Not Available	1193	Open in IMG/M
3300025849\|Ga0209603_1070264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1704	Open in IMG/M
3300025869\|Ga0209308_10137651	Not Available	1136	Open in IMG/M
3300025876\|Ga0209223_10240774	Not Available	856	Open in IMG/M
3300025879\|Ga0209555_10073857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1498	Open in IMG/M
3300025880\|Ga0209534_10409751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	584	Open in IMG/M
3300025892\|Ga0209630_10465004	Not Available	531	Open in IMG/M
3300026427\|Ga0247556_1102768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	552	Open in IMG/M
3300027308\|Ga0208796_1023796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1468	Open in IMG/M
3300027315\|Ga0208949_1020062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Leisingera → unclassified Leisingera → Leisingera sp. ANG-M1	1363	Open in IMG/M
3300027571\|Ga0208897_1051144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1100	Open in IMG/M
3300027612\|Ga0209037_1070607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	859	Open in IMG/M
3300027612\|Ga0209037_1074910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	832	Open in IMG/M
3300028106\|Ga0247596_1048859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	940	Open in IMG/M
3300028130\|Ga0228619_1027229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1758	Open in IMG/M
3300028196\|Ga0257114_1071097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1480	Open in IMG/M
3300028280\|Ga0228646_1050189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1034	Open in IMG/M
3300028282\|Ga0256413_1129584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	916	Open in IMG/M
3300028284\|Ga0257120_1063039	Not Available	903	Open in IMG/M
3300028416\|Ga0228614_1099160	Not Available	531	Open in IMG/M
3300031700\|Ga0302130_1045132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Marinobacterium → unclassified Marinobacterium → Marinobacterium sp. xm-g-59	1448	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Pelagic	Environmental → Aquatic → Marine → Pelagic	45.45%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	25.17%
Coastal	Environmental → Aquatic → Marine → Coastal	14.69%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	6.29%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.50%
Oceanic	Environmental → Aquatic → Marine → Oceanic	2.80%
Inlet	Environmental → Aquatic → Marine → Inlet	2.10%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	45.45%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	14.69%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	11.19%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	9.09%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	6.29%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	4.90%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.50%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	2.10%

Habitat	Taxonomy	Distribution
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	37.76%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	11.19%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	9.09%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	7.69%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	7.69%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	6.29%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	4.90%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	3.50%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	2.80%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	2.10%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	2.10%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	1.40%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.70%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.70%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	0.70%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.70%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001347	Pelagic Microbial community sample from North Sea - COGITO 998_met_06	Environmental	Open in IMG/M
3300001351	Pelagic Microbial community sample from North Sea - COGITO 998_met_03	Environmental	Open in IMG/M
3300001352	Pelagic Microbial community sample from North Sea - COGITO 998_met_07	Environmental	Open in IMG/M
3300003410	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_153SG_22_DNA	Environmental	Open in IMG/M
3300003580	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - Saanich Inlet SI074_LV_120m_DNA	Environmental	Open in IMG/M
3300003620	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA	Environmental	Open in IMG/M
3300004279	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m	Environmental	Open in IMG/M
3300005239	Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of Maine	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300005942	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.757	Environmental	Open in IMG/M
3300006404	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006850	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_RNA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007554	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709	Environmental	Open in IMG/M
3300007557	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.715	Environmental	Open in IMG/M
3300007653	Estuarine microbial communities from the Columbia River estuary - metaG 1546C-3	Environmental	Open in IMG/M
3300007692	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.743	Environmental	Open in IMG/M
3300007981	Estuarine microbial communities from the Columbia River estuary - metaG 1556A-3	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300009055	Estuarine microbial communities from the Columbia River estuary - metaG 1556B-3	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009074	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430	Environmental	Open in IMG/M
3300009076	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511	Environmental	Open in IMG/M
3300009193	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321	Environmental	Open in IMG/M
3300009422	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138	Environmental	Open in IMG/M
3300009423	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423	Environmental	Open in IMG/M
3300009426	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009435	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413	Environmental	Open in IMG/M
3300009437	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414	Environmental	Open in IMG/M
3300009438	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506	Environmental	Open in IMG/M
3300009442	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519	Environmental	Open in IMG/M
3300009443	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421	Environmental	Open in IMG/M
3300009445	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331	Environmental	Open in IMG/M
3300009447	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509	Environmental	Open in IMG/M
3300009467	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530	Environmental	Open in IMG/M
3300009476	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407	Environmental	Open in IMG/M
3300009495	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531	Environmental	Open in IMG/M
3300009496	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524	Environmental	Open in IMG/M
3300009498	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300009507	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300012524	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016745	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041411BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018420	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020166	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1	Environmental	Open in IMG/M
3300020173	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041408US metaG (spades assembly)	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020177	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041402US metaG (spades assembly)	Environmental	Open in IMG/M
3300020182	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2	Environmental	Open in IMG/M
3300020185	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1	Environmental	Open in IMG/M
3300020187	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1	Environmental	Open in IMG/M
3300020188	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041411US metaG (spades assembly)	Environmental	Open in IMG/M
3300020810	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041404US metaG (spades assembly)	Environmental	Open in IMG/M
3300021365	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1	Environmental	Open in IMG/M
3300021373	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282	Environmental	Open in IMG/M
3300021389	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300022921	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG	Environmental	Open in IMG/M
3300022928	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG	Environmental	Open in IMG/M
3300022929	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG	Environmental	Open in IMG/M
3300023273	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG	Environmental	Open in IMG/M
3300024247	Seawater microbial communities from Monterey Bay, California, United States - 36D_r	Environmental	Open in IMG/M
3300024264 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MG	Environmental	Open in IMG/M
3300024417	Seawater microbial communities from Monterey Bay, California, United States - 62D	Environmental	Open in IMG/M
3300024508	Seawater microbial communities from Monterey Bay, California, United States - 77D	Environmental	Open in IMG/M
3300025617	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_153SG_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025621	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511 (SPAdes)	Environmental	Open in IMG/M
3300025626	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531 (SPAdes)	Environmental	Open in IMG/M
3300025632	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 (SPAdes)	Environmental	Open in IMG/M
3300025641	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506 (SPAdes)	Environmental	Open in IMG/M
3300025654	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509 (SPAdes)	Environmental	Open in IMG/M
3300025680	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328 (SPAdes)	Environmental	Open in IMG/M
3300025685	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404 (SPAdes)	Environmental	Open in IMG/M
3300025695	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025696	Pelagic Microbial community sample from North Sea - COGITO 998_met_02 (SPAdes)	Environmental	Open in IMG/M
3300025699	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503 (SPAdes)	Environmental	Open in IMG/M
3300025701	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_59LU_5_DNA (SPAdes)	Environmental	Open in IMG/M
3300025704	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 (SPAdes)	Environmental	Open in IMG/M
3300025767	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_105LU_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025806	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025809	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 (SPAdes)	Environmental	Open in IMG/M
3300025816	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330 (SPAdes)	Environmental	Open in IMG/M
3300025849	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)	Environmental	Open in IMG/M
3300025869	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)	Environmental	Open in IMG/M
3300025876	Pelagic Microbial community sample from North Sea - COGITO 998_met_06 (SPAdes)	Environmental	Open in IMG/M
3300025879	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_85LU_5_DNA (SPAdes)	Environmental	Open in IMG/M
3300025880	Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)	Environmental	Open in IMG/M
3300025892	Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)	Environmental	Open in IMG/M
3300026427	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 1R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027308	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.725 (SPAdes)	Environmental	Open in IMG/M
3300027315	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_03_M0_10 (SPAdes)	Environmental	Open in IMG/M
3300027571	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697 (SPAdes)	Environmental	Open in IMG/M
3300027612	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_125SG_5_DNA (SPAdes)	Environmental	Open in IMG/M
3300028106	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 66R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028130	Seawater microbial communities from Monterey Bay, California, United States - 22D	Environmental	Open in IMG/M
3300028196	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_10m	Environmental	Open in IMG/M
3300028280	Seawater microbial communities from Monterey Bay, California, United States - 58D	Environmental	Open in IMG/M
3300028282	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - WCR_77 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028284	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI106_10	Environmental	Open in IMG/M
3300028416	Seawater microbial communities from Monterey Bay, California, United States - 15D	Environmental	Open in IMG/M
3300031700	Marine microbial communities from Western Arctic Ocean, Canada - CB9_surface	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20156J14371_100754781	3300001347	Pelagic Marine	YLSNDLIRVVTLHAAVMASGSLTYLVGCGIASNDSYQVCYL*
JGI20156J14371_101150331	3300001347	Pelagic Marine	LAAKTVLSNHLIRVVTLHATVMASGSLAYLMGCGIASDDSYQACYP*
JGI20153J14318_100669801	3300001351	Pelagic Marine	DLIRVVTLHATVMASGSLTYLVGCGVASYNSYQVCYL*
JGI20157J14317_101643312	3300001352	Pelagic Marine	MYYTARVPRVKDPICVVTLHATVMASGSLTYLVGGGVASYDSYLSRP*
JGI20157J14317_101722511	3300001352	Pelagic Marine	VELTHRKIKVTRVSDLKRVVTLHATVMASGSLTYLMGCSIASNGNYQVYLIV*
JGI26086J50260_10175984	3300003410	Marine	VNDLIRDVTLHAAVVASGSLTYLVGCGVASYDSYQVCYL*
JGI26260J51721_10430282	3300003580	Marine	SLAIAAKTVLSNHLIRVVTLHATVMTSGFLTYLMGCGVASYDSNQVG*
JGI26273J51734_100647182	3300003620	Marine	LFEPFGLNLFVNDLIRDVTLHAAVVASGSLTYLVGCGVASYDSYQVCYL*
Ga0066605_101372311	3300004279	Marine	SIYPAIRVVTLHATVMASGSLAYLMGCGVASHDSNQVSYL*
Ga0073579_11081851	3300005239	Marine	IRVVTLHATVMASGSLTYLVGCGVASNDSYQVCYLSVHLSTST*
Ga0078893_115014101	3300005837	Marine Surface Water	TRINDLIRGVTLNATVMASGSLTHLVGCSIASNDSYQVSYL*
Ga0070742_101674563	3300005942	Estuarine	ILCSLTSFNDLIRVVTLHAAVVTSGSLTYLVGRGIASYDSNQVSYL*
Ga0070742_102037372	3300005942	Estuarine	DLIRVVTLHAAVMASGSLTYLMGCGVASNDSDQVSYL*
Ga0075515_109296441	3300006404	Aqueous	RITRVNDLISVVTLHPTVVASSPLTYLVGCGIASNDCNEV*
Ga0075491_15324751	3300006850	Aqueous	TRVNDLIRVVTLHATVMASGSLAYLMGCGIASDDSYQVCYL*
Ga0102820_10511821	3300007554	Estuarine	VNDLIRVVTLHAAVVTSGSLTHLVGRGIASYDSNQVSYL*
Ga0102821_10107451	3300007557	Estuarine	LIRVVTLHATVIASGSLTYLVGCGVASHDSYQVSYL*
Ga0102868_11751313	3300007653	Estuarine	VSTNDLISVVTLYATVMASGPLTYLVGCGIASYDSNQVSYL*
Ga0102823_10535701	3300007692	Estuarine	LVDDLIRDVTLHAAVVASGSLTYLVGCGVASHDSYQVCYL*
Ga0102904_10597421	3300007981	Estuarine	NDLIRVVTLHATVIASGSLTYLVGCGVASHDSYQVCYL*
Ga0075480_105913311	3300008012	Aqueous	ITRVNDLIRVVTLYATVVASGSLTYLTGCGIASYDSYQVCYL*
Ga0102905_11263441	3300009055	Estuarine	LISIVTLHAAVVASGSLTYLMGCGVAAYYSNQVCHL*
Ga0115566_102431291	3300009071	Pelagic Marine	NDLIRVVTLDATVMASGLLTYLMGRGVASYDCDQVCYF*
Ga0115566_105179161	3300009071	Pelagic Marine	RVNDLIRVVTLDATVVASGSLTYLVGCGVASNDSNQVCYL*
Ga0115549_10891991	3300009074	Pelagic Marine	DLIRVVTLHAAIVASGSLTYLVGCGVASYDSNQVSYL*
Ga0115550_12144531	3300009076	Pelagic Marine	RVVTLDAAVMASGSLTYLVGCGVASDYSDKVGYH*
Ga0115550_12361741	3300009076	Pelagic Marine	DLISVVTRHATVVASGPLTYLVGCGVAYNYCNQVSYL*
Ga0115551_11109501	3300009193	Pelagic Marine	VTRVNDLIRVVTLHTTGMASGSLAYLVGCGIASYDSDQVSYL*
Ga0115551_12197102	3300009193	Pelagic Marine	ILVITIHAAVMASGSLAYLMGCGVTSYDSYQVSYL*
Ga0114998_102320031	3300009422	Marine	LIRVVAFGSAVMTSGSLTYLMGCGVASNDQYQVGYL*
Ga0115548_10612821	3300009423	Pelagic Marine	IRVVTLYATVVASGSLTYLMGCRIASYDSHQVSYL*
Ga0115547_12271131	3300009426	Pelagic Marine	TRVDDLVRVVTLHATVMASGSLTYLMGRGVASYDSYQVSYF*
Ga0115545_10768381	3300009433	Pelagic Marine	TIHRNIRVTRVDDLIRVVTLRATVMASGSLTHFVGRGVASYDSYQVCYL*
Ga0115545_12167541	3300009433	Pelagic Marine	HRNTRITRVNDLERVVTLYATITASGSLTYLVGYGVASYYSNQVSYL*
Ga0115546_11206681	3300009435	Pelagic Marine	TRVNDLIRVVTLYATVMASGSLTYLMGCRIASYDSDQVSYL*
Ga0115556_12481921	3300009437	Pelagic Marine	DLIGVVTLHAAVVTSGSLTYLVGCGIASNDSYQVSYF*
Ga0115556_13445671	3300009437	Pelagic Marine	RNTRVTRVNDLIRVGTLHTTGMASGSLAYLVGCGIASYDSDQVSYL*
Ga0115559_12394051	3300009438	Pelagic Marine	HRHTRVTRVNDLIRVITLHAAVMASGSLSYLVGRGITSNDSDQVCYL*
Ga0115563_10249841	3300009442	Pelagic Marine	IHRYTRITRVNDLIRVVTLHAAVMASGSLAYLMGCGVTSDDSYKVCDL*
Ga0115563_11241391	3300009442	Pelagic Marine	HLIRVVTLHATVMASGSLAYLMGCGIASDDSYQACYP*
Ga0115557_12909452	3300009443	Pelagic Marine	TRVNDLIRVVTLYATVMASGSLTYLMGCRVASYDSDQVCYL*
Ga0115553_14277382	3300009445	Pelagic Marine	DLIRVVTLYAAVMASGSLTYLMGCGIASNDSYQVCYL*
Ga0115560_13854951	3300009447	Pelagic Marine	LIRVVTLHATVIKSGSLTYLMGCCIAAYYSDQVGYL*
Ga0115565_100693721	3300009467	Pelagic Marine	TRVSDLIRVVTLHATVMASGSLTYLMGCSIASNGSYQVYLIV*
Ga0115555_11344761	3300009476	Pelagic Marine	PSPIHRNTRVTRVNDLIRVVTLHATVMTSGSLTYLMGCRIASYDSDQVSYL*
Ga0115571_11829401	3300009495	Pelagic Marine	TRVTRINDLIRVVTLHTTGMASGSLAYLVGCGIASYDSDQVSYL*
Ga0115571_14430171	3300009495	Pelagic Marine	ALEDDLIRVITLHAAVIASGSLTYFMGCGIASNDSYQVCYLSVHLSTST*
Ga0115570_102920941	3300009496	Pelagic Marine	TTINDLIRVITLQTAVMASGSLAYFVGCGVASDNSYQVCYL*
Ga0115570_102924271	3300009496	Pelagic Marine	TRVNDLIRVVTLHATVMASGSLTYLVGCGIASNDSYQVSYL*
Ga0115570_103775731	3300009496	Pelagic Marine	RVNDLIRVVTLHTTVMASGPLTYLMGCGVASYDSYQVRYL*
Ga0115570_103970342	3300009496	Pelagic Marine	RITRVNDLERVVTLYATITASGSLTYLVGYGVASYYSNQVSYL*
Ga0115568_103576711	3300009498	Pelagic Marine	IRVVTLHAAVMASGSLTYLMGCGVASYDSYQVRYL*
Ga0115564_100588782	3300009505	Pelagic Marine	MYCTARVPRVKDLIRVVTLNATVMASGSLAYLVGCGVASYDSCMVGYL*
Ga0115564_100718671	3300009505	Pelagic Marine	VTRVNDLISVVTLHATVMASGSLTYLVGCGIASYDCNQVCYL*
Ga0115564_101813141	3300009505	Pelagic Marine	VRITRENDLIRFVALHTAVMASGSLTYLMGCDVTSDDSDQVCYF*
Ga0115564_102659503	3300009505	Pelagic Marine	VKDLIRVVTLNATVMASGSLAYLVGCGVASYYSDQVCYL*
Ga0115564_105690982	3300009505	Pelagic Marine	RVNDLIRVVTLDATVVASGSLTYLVGCGIASYDSNQVCYL*
Ga0115572_103875221	3300009507	Pelagic Marine	TPELPRQYDLIRVLTLHAAVMASGSLAYLVGCGIASYNSDKVCYL*
Ga0115572_107154091	3300009507	Pelagic Marine	MNRLSYLIRVITLHSTIMASGSLSYFMGCGVASNYSDQVG
Ga0115567_102962781	3300009508	Pelagic Marine	VNDLIRVVTLHAAVVTSGSLTYLVGCGVASDNCSKV*
Ga0115003_104278593	3300009512	Marine	RITRVNDLIRVVTLYATLLASSSLTYLMGCGIASYDCNQVSYL*
Ga0129324_103526101	3300010368	Freshwater To Marine Saline Gradient	VTRVNDLIRVVTLHATVMASGSLTYLVGCGVASHDSNQVCYL*
Ga0129324_104027131	3300010368	Freshwater To Marine Saline Gradient	NDLIRVVTLYAAVMASGSLTYLMVCGIASSDSYQVYYL*
Ga0129331_13043651	3300012524	Aqueous	NDLERVITLHATVMASCSLMYLMGCGIASYDCNEVSYL*
Ga0182093_15803954	3300016745	Salt Marsh	RITRVNDLIRVVTLYATVVASSSLTHLMGCGVTSDDSDQVCYL
Ga0180120_100955211	3300017697	Freshwater To Marine Saline Gradient	AAKTVLSDHLIRVVTLNATVVASGPLTYLVGCGIASNDSYQVSYL
Ga0180120_101815831	3300017697	Freshwater To Marine Saline Gradient	DLVRVVTLHATVMASGSLTYLMGRGVASYDSYQVSYF
Ga0181607_105838431	3300017950	Salt Marsh	NDLIRVVTLHATVMASGPLTYLVGCGIASNDSYKVCYL
Ga0181563_101183381	3300018420	Salt Marsh	IRVTRVNDLIRVVAFDATVRASGSLTYLVGCSVASNDSYQVGYL
Ga0206125_101980102	3300020165	Seawater	HRYTRATRVNDLIRVITIHATVMASGSLTHLMSRGVAFYDCNQVSYL
Ga0206128_10398562	3300020166	Seawater	MYCTARVPRVKDLIRVVTLNATVMASGSLAYLVGCGVASYDSCMVGYL
Ga0206128_13448092	3300020166	Seawater	LVRVVTLHATVMASGSLTYLVGCGIAPDYSDKVCYL
Ga0181602_100152491	3300020173	Salt Marsh	RVTRVNDLIRVVTLHATVMASGSLTYLVGCGIASYDSYQVGYL
Ga0206124_100456634	3300020175	Seawater	FVKDLIRVVTLNATVMASGSLAYLVGCGVASYDSCMVGYL
Ga0206124_101603301	3300020175	Seawater	NTRVTRVNDLIRVVTLDAAVMASGSLTYFVGCGVASNDSYKVFYF
Ga0181596_101169301	3300020177	Salt Marsh	YRIIKVTRVNDLIRVVTLYAAVMASGPLTHLMSYGVASNDSYQVCYL
Ga0206129_100978192	3300020182	Seawater	PIHRNVRITRENDLIRFVALHTAVMASGSLTYLMGCDVTSDDSDQVCYF
Ga0206131_103174501	3300020185	Seawater	RYTRVTRVNDLVRVVTLHATVMASGSLAYLMGCGIASYDSYQVSYL
Ga0206130_100556594	3300020187	Seawater	PRVKDLIRVVTLNATVMASGSLAYLVGCGVASYDSCMVGYL
Ga0206130_101654512	3300020187	Seawater	IRVVTLHATVMASGSLAYLMGCGVASHDSNQVSYL
Ga0206130_102019223	3300020187	Seawater	RIIKVTRVNDLIRVVTLYAAVMASGPLTHLMSYGVASNDSYQVCYL
Ga0181605_100577831	3300020188	Salt Marsh	PIHRNTRVTRVNDLIRVVTLHATVMASGSLTYLVGCGIASYDSYQVGYL
Ga0181605_100717591	3300020188	Salt Marsh	IYRTARVSRVNDLIGVVTLHAAVMASGSLTYLVGCGVASYDCNQGCYL
Ga0181605_100845091	3300020188	Salt Marsh	DLIGVVTLHAAVMASGSLTYLVGCRIASYDSDQVSYL
Ga0181598_10488303	3300020810	Salt Marsh	DLIRVVTLHATVMASGSLTYLVGCGIASYDSYQVGYL
Ga0206123_101570472	3300021365	Seawater	VTRVNDLIRVVTLYATVVASSSLTHLVGCGIASNDSYQVSYL
Ga0213865_105224151	3300021373	Seawater	NDLIRVVTLHPTVMASGPLAYFMGCSVASYYSYQVRYL
Ga0213868_102174781	3300021389	Seawater	RVTRVNDLKRVVTLHATVMASGSLTYLMGCGVASYDSYQVCYF
Ga0222716_104854061	3300021959	Estuarine Water	DDLIRVVTLYTAVMASGSLTYLVGCGVASNDSYQVCYLSVHLSTST
Ga0255765_100506618	3300022921	Salt Marsh	RNIRITRVNDLIRVVTLYATVVASGSLTYLMGCSVASYDSYQVRYL
Ga0255758_101072864	3300022928	Salt Marsh	APQFDLIRVVTLHATVMASCSLTYLVGCGVASNDSYQVSYF
Ga0255758_102944232	3300022928	Salt Marsh	VKDLIRVVTLDAAVMASGSLTYLVGCGVASNDSYKVFYF
Ga0255752_101046024	3300022929	Salt Marsh	RNIRVTRVNDLIRVVAFDATVRASGSLTNLMGCSVASNDSYQVGYL
Ga0255752_101063263	3300022929	Salt Marsh	VNDLIRVVTLDAAVMASGSLTYLVGCGVASNDSYKVFYF
Ga0255763_10573274	3300023273	Salt Marsh	RDIRITRIDDLVRVVTLHATVMASGSLTYLMGRGVASYDSYQVSYF
Ga0255763_11302801	3300023273	Salt Marsh	NDLIRVVTLHAAVVAFGSLTYLTGCGIASNDCNEV
Ga0228675_10466031	3300024247	Seawater	IRIARAKVLIRVVTLDAAVMTSGFLTHLMGCGVASYGCHQVCYL
(restricted) Ga0233444_103641712	3300024264	Seawater	YPAIRVVTLHATVMASGSLAYLMGCGVASHDSNQVSYL
Ga0228650_10270421	3300024417	Seawater	LRSIHRNVKVVRVNGLIRVVTLHAAVIASGSLAYLMGCGVPSYHCNQVSYL
Ga0228663_11035391	3300024508	Seawater	DLIRVVTLDAAVMTSGFLTHLMGCGVASYGCHQVCNL
Ga0209138_10129498	3300025617	Marine	IHRNVRVTRVNDLIRVVTLHATVIASGSLTYLVGCGVASHDSYQVSYL
Ga0209138_10708803	3300025617	Marine	SFTINDLIRVVTLHAAVMASGFLSYLVGCGIASNDSYQVCYL
Ga0209138_11177131	3300025617	Marine	DLVRVVTLHATVMASGSLTYLVGCGIAPDYSDKVCYL
Ga0209504_11096671	3300025621	Pelagic Marine	RINDLIRDVTLHTTGMASGLLTYLVGCGVASYDCNQVCYL
Ga0209716_10530801	3300025626	Pelagic Marine	HRNTRVTRINDLIRVVTLHTTGMASGSLAYLVGCGIASYDSDQVSYL
Ga0209194_10543601	3300025632	Pelagic Marine	ITHENDLIRFVALHASVMASGSLTYLMGCSIASYDSNQVCCL
Ga0209833_11187921	3300025641	Pelagic Marine	CGCAMYCTARVPRVKDLIRVVTLNATVMASGSLAYLVGCGVASYDSCMVGYL
Ga0209196_11685501	3300025654	Pelagic Marine	IKVTRVDDLVRVVTLHATVMASGSLTYLMGRGVASYDSYQVSYF
Ga0209306_11067173	3300025680	Pelagic Marine	NIRITRVNDLIRVVTLHATVMASGSLTYLMGCGVSSYNSNQVCYL
Ga0209095_10610462	3300025685	Pelagic Marine	RVTRVNDLTRVITLHAKIMATGSLTYLVGCGVASYDCNQVCYFWTRVMLT
Ga0209653_10839561	3300025695	Marine	IHRNTRITRVNDLIRVVTLHATVMASGSLTYLVGCGIASYDSDQVCYF
Ga0209532_11031461	3300025696	Pelagic Marine	IRVVTLHAAIVASGSLTYLVGCGVASYDSNQVSYL
Ga0209715_10797362	3300025699	Pelagic Marine	YTRATRVNDLIRVITIHATVMASGSLTHLMSRGVAFYDCNQVSYL
Ga0209715_11854361	3300025699	Pelagic Marine	RVTRVNDLIRVVTLHATVMASGSLTYLVGCGVASNDSYQVSYL
Ga0209771_10948861	3300025701	Marine	RNIRVTRVNDLIRVVTFHATVVASGSLAYLVGCGIASNDSDQVCDL
Ga0209602_11887703	3300025704	Pelagic Marine	NDLIRVVTLHATVIASGSLTYLVGCSIASNGNYQVYLIV
Ga0209137_11396441	3300025767	Marine	VYLNDLIRVVPLHATVMASGSLAYLMGCGIASYDCNQVYYL
Ga0208545_10372244	3300025806	Aqueous	IRVVTLDAAVMASGSLTYLVGCGVASNDSYKVFYF
Ga0209199_10494981	3300025809	Pelagic Marine	ATINNLIRIVTLHATVMASGSLTYLVGCGVASYDSYQVCYL
Ga0209199_10789611	3300025809	Pelagic Marine	VRITRENDLIRFVALHTAVMASGSLTYLMGCDVTSDDSDQVCYF
Ga0209199_11583981	3300025809	Pelagic Marine	VNDLIRVVTLHATVMTSGPLTYLVGCGVASYDSYQVSYL
Ga0209193_10334611	3300025816	Pelagic Marine	VTRVNDLIRVVTLHATVMTSGSLTYLMGCRIASYDSDQVSYL
Ga0209193_10481891	3300025816	Pelagic Marine	VNDLIRVVTLHATVMASGSLTYLMGCGVSSYDSYKVCYL
Ga0209603_10702644	3300025849	Pelagic Marine	SYLSNDLVRVVTPHTTGMASGSLAYLVGCGIASYDSDQVSYL
Ga0209308_101376511	3300025869	Pelagic Marine	MNRISYLIRVVTLYVTVITSGSLAYFVGCGVASNDSYQVSYL
Ga0209223_102407741	3300025876	Pelagic Marine	RVNDLIRVVTLHATVAASGSLTYLVGGGVASYDSNQVCYL
Ga0209555_100738573	3300025879	Marine	ITRVNDLERVVTLHATVMASGSLTYLVGCGVASYDSYQVCYL
Ga0209534_104097511	3300025880	Pelagic Marine	PIHRNTRVTRVNDLIRVVTLHATVMTSGSLTYLMGCRIASYDSDQVSYL
Ga0209630_104650041	3300025892	Pelagic Marine	DLIRVVTLHATVMASGSLTYLMGCGVASYDSDQVCYL
Ga0247556_11027682	3300026427	Seawater	AALVDDLVRVVTLHAAVIASGSLSYLMGCGIASYDSYQAC
Ga0208796_10237961	3300027308	Estuarine	RITRVNDLIRVVTLHATVMASGSLTYLVGCRVASYDSDEVCYL
Ga0208949_10200624	3300027315	Marine	ALVDDLIRVVTRHATVMTSCSLTHLVGRSIASDYSYQVCYL
Ga0208897_10511441	3300027571	Estuarine	LNLFVNDLIRDVTLHAAVVASGSLTYLVGCGVASYDSYQVCYL
Ga0209037_10706071	3300027612	Marine	VTRVNDLIRVVTLHATVMASGSLSYLVGCGVATNDSYQVCYL
Ga0209037_10749101	3300027612	Marine	INDLVRVVTLHAAVVTSGSLTYLVGRGIASYDSNQVSYL
Ga0247596_10488591	3300028106	Seawater	RAKVLIRVVTLDAAVIASGFLTHLMGCGVASYGCHEVCYF
Ga0228619_10272294	3300028130	Seawater	RVTRVNDLIRVVALYATFVASGPLARLMSRGIASNDCYKVR
Ga0257114_10710974	3300028196	Marine	FVDDLIRVVTLHATVMASGSLSYLVGCRIASYDCYQVRYL
Ga0228646_10501893	3300028280	Seawater	IHSNALAALVDDLVRVVTLHAAVIASGSLSYLMGCGIASYDSYQAC
Ga0256413_11295841	3300028282	Seawater	TRAKVLIRFVTLDAAVMTSGFLTHLMGCGVASYGCHQVCYL
Ga0257120_10630391	3300028284	Marine	SLTSFNDLIRVVTFHAAVMASGSLTYLMGCSVASYDSYQVRYL
Ga0228614_10991601	3300028416	Seawater	IIKVTRINDLISVVTLNATVVASSSPAYLVRCGVASYDSYQDCYL
Ga0302130_10451324	3300031700	Marine	DLIRVVAFGSAVMTSGSLTYLMGCGVASNDQYQVGYL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters