NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F051844

Metagenome / Metatranscriptome Family F051844

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F051844
Family Type Metagenome / Metatranscriptome
Number of Sequences 143
Average Sequence Length 42 residues
Representative Sequence MGYHPLVKRLLDGELSLAELPPELRAEGEEALRLLGAVD
Number of Associated Samples 125
Number of Associated Scaffolds 143

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 99.30 %
% of genes near scaffold ends (potentially truncated) 98.60 %
% of genes from short scaffolds (< 2000 bps) 84.62 %
Associated GOLD sequencing projects 116
AlphaFold2 3D model prediction Yes
3D model pTM-score0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(24.476 % of family members)
Environment Ontology (ENVO) Unclassified
(55.944 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(59.441 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 38.81%    β-sheet: 0.00%    Coil/Unstructured: 61.19%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.66
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 143 Family Scaffolds
PF08281Sigma70_r4_2 90.21
PF04542Sigma70_r2 5.59
PF00593TonB_dep_Rec 2.10
PF07980SusD_RagB 0.70
PF16561AMPK1_CBM 0.70

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 143 Family Scaffolds
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 5.59
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 5.59
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 5.59
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 5.59

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002558|JGI25385J37094_10183223All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300002560|JGI25383J37093_10207438All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300002561|JGI25384J37096_10126670All Organisms → cellular organisms → Bacteria848Open in IMG/M
3300002562|JGI25382J37095_10247435All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium538Open in IMG/M
3300002911|JGI25390J43892_10088123All Organisms → cellular organisms → Bacteria696Open in IMG/M
3300002914|JGI25617J43924_10091120All Organisms → cellular organisms → Bacteria1098Open in IMG/M
3300005172|Ga0066683_10541190All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300005174|Ga0066680_10596236All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium692Open in IMG/M
3300005176|Ga0066679_10146797All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1473Open in IMG/M
3300005178|Ga0066688_10163809All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1398Open in IMG/M
3300005179|Ga0066684_10659013All Organisms → cellular organisms → Bacteria703Open in IMG/M
3300005181|Ga0066678_10402515All Organisms → cellular organisms → Bacteria907Open in IMG/M
3300005186|Ga0066676_10133039All Organisms → cellular organisms → Bacteria1547Open in IMG/M
3300005187|Ga0066675_10063472All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2324Open in IMG/M
3300005294|Ga0065705_10313030All Organisms → cellular organisms → Bacteria1027Open in IMG/M
3300005447|Ga0066689_10111966All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1581Open in IMG/M
3300005450|Ga0066682_10169085All Organisms → cellular organisms → Bacteria1396Open in IMG/M
3300005468|Ga0070707_100383873All Organisms → cellular organisms → Bacteria1364Open in IMG/M
3300005471|Ga0070698_101152823All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300005530|Ga0070679_101672372All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300005540|Ga0066697_10175870All Organisms → cellular organisms → Bacteria1269Open in IMG/M
3300005555|Ga0066692_10648509All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300005555|Ga0066692_10694623All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300005558|Ga0066698_10047182All Organisms → cellular organisms → Bacteria2705Open in IMG/M
3300005559|Ga0066700_10585182All Organisms → cellular organisms → Bacteria779Open in IMG/M
3300005561|Ga0066699_10227365All Organisms → cellular organisms → Bacteria1309Open in IMG/M
3300005566|Ga0066693_10163837All Organisms → cellular organisms → Bacteria842Open in IMG/M
3300005575|Ga0066702_10483710All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300005586|Ga0066691_10039569All Organisms → cellular organisms → Bacteria2481Open in IMG/M
3300005586|Ga0066691_10916353All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300006032|Ga0066696_10037468All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2644Open in IMG/M
3300006791|Ga0066653_10124400All Organisms → cellular organisms → Bacteria1215Open in IMG/M
3300006797|Ga0066659_10019946All Organisms → cellular organisms → Bacteria3815Open in IMG/M
3300006797|Ga0066659_10060849All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2428Open in IMG/M
3300006797|Ga0066659_11413374All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300006854|Ga0075425_100440999All Organisms → cellular organisms → Bacteria1499Open in IMG/M
3300006903|Ga0075426_10442912All Organisms → cellular organisms → Bacteria961Open in IMG/M
3300006914|Ga0075436_100657536All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300007076|Ga0075435_100997007All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300007076|Ga0075435_101316211All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium633Open in IMG/M
3300007255|Ga0099791_10046817All Organisms → cellular organisms → Bacteria1931Open in IMG/M
3300007258|Ga0099793_10000168All Organisms → cellular organisms → Bacteria15265Open in IMG/M
3300009012|Ga0066710_100972206All Organisms → cellular organisms → Bacteria1309Open in IMG/M
3300009147|Ga0114129_13331719All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300009812|Ga0105067_1029385All Organisms → cellular organisms → Bacteria799Open in IMG/M
3300010134|Ga0127484_1034278All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300010134|Ga0127484_1141090All Organisms → cellular organisms → Bacteria732Open in IMG/M
3300010142|Ga0127483_1115801All Organisms → cellular organisms → Bacteria729Open in IMG/M
3300010320|Ga0134109_10020131All Organisms → cellular organisms → Bacteria2038Open in IMG/M
3300010320|Ga0134109_10286552All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300010320|Ga0134109_10333294All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300010322|Ga0134084_10460240All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300010335|Ga0134063_10584051All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium567Open in IMG/M
3300010336|Ga0134071_10163054All Organisms → cellular organisms → Bacteria1088Open in IMG/M
3300010336|Ga0134071_10610601All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300010371|Ga0134125_11476666All Organisms → cellular organisms → Bacteria740Open in IMG/M
3300010403|Ga0134123_10038122All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes3546Open in IMG/M
3300010896|Ga0138111_1070682All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300011120|Ga0150983_11437068All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300012200|Ga0137382_10355828All Organisms → cellular organisms → Bacteria1027Open in IMG/M
3300012200|Ga0137382_10447723All Organisms → cellular organisms → Bacteria914Open in IMG/M
3300012202|Ga0137363_11578400All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300012203|Ga0137399_10151279All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1854Open in IMG/M
3300012204|Ga0137374_10494734All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium951Open in IMG/M
3300012285|Ga0137370_10946460All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300012349|Ga0137387_10147465All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1673Open in IMG/M
3300012349|Ga0137387_10170970All Organisms → cellular organisms → Bacteria1554Open in IMG/M
3300012354|Ga0137366_10106310All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2125Open in IMG/M
3300012357|Ga0137384_10144770All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1989Open in IMG/M
3300012359|Ga0137385_10141343All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2120Open in IMG/M
3300012360|Ga0137375_10600372All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium917Open in IMG/M
3300012362|Ga0137361_11037976All Organisms → cellular organisms → Bacteria740Open in IMG/M
3300012376|Ga0134032_1243327All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300012379|Ga0134058_1191440All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300012380|Ga0134047_1202999All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300012392|Ga0134043_1112379All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300012395|Ga0134044_1047245All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300012398|Ga0134051_1335640All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300012400|Ga0134048_1371337All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300012403|Ga0134049_1243960All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300012407|Ga0134050_1446308All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300012409|Ga0134045_1115444All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300012532|Ga0137373_10030060All Organisms → cellular organisms → Bacteria5294Open in IMG/M
3300012917|Ga0137395_10188588All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1430Open in IMG/M
3300012927|Ga0137416_10967316All Organisms → cellular organisms → Bacteria759Open in IMG/M
3300012930|Ga0137407_11897022All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300012944|Ga0137410_10061885All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2694Open in IMG/M
3300012975|Ga0134110_10312629All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300012976|Ga0134076_10086311All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1229Open in IMG/M
3300014150|Ga0134081_10007944All Organisms → cellular organisms → Bacteria2776Open in IMG/M
3300014154|Ga0134075_10164256All Organisms → cellular organisms → Bacteria951Open in IMG/M
3300014157|Ga0134078_10034426All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1682Open in IMG/M
3300015359|Ga0134085_10095229All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1232Open in IMG/M
3300015373|Ga0132257_100749594All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1216Open in IMG/M
3300017657|Ga0134074_1009045All Organisms → cellular organisms → Bacteria3199Open in IMG/M
3300017659|Ga0134083_10161636All Organisms → cellular organisms → Bacteria911Open in IMG/M
3300018071|Ga0184618_10357365All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium622Open in IMG/M
3300018078|Ga0184612_10409582All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium680Open in IMG/M
3300018431|Ga0066655_10237008All Organisms → cellular organisms → Bacteria1155Open in IMG/M
3300018431|Ga0066655_11047183All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300018468|Ga0066662_11888184All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300018468|Ga0066662_12295930All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300018482|Ga0066669_11012778All Organisms → cellular organisms → Bacteria750Open in IMG/M
3300018482|Ga0066669_11765577All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300019249|Ga0184648_1190498All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium707Open in IMG/M
3300019255|Ga0184643_1457623All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1906Open in IMG/M
3300019259|Ga0184646_1449381All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium589Open in IMG/M
3300020170|Ga0179594_10019962All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2021Open in IMG/M
3300020170|Ga0179594_10187846All Organisms → cellular organisms → Bacteria772Open in IMG/M
3300022195|Ga0222625_1227838All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium745Open in IMG/M
3300025322|Ga0209641_10137575All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1859Open in IMG/M
3300026301|Ga0209238_1193199All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium597Open in IMG/M
3300026306|Ga0209468_1017681All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2575Open in IMG/M
3300026309|Ga0209055_1185224All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300026310|Ga0209239_1033782All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2408Open in IMG/M
3300026313|Ga0209761_1098609All Organisms → cellular organisms → Bacteria1467Open in IMG/M
3300026323|Ga0209472_1016600All Organisms → cellular organisms → Bacteria3583Open in IMG/M
3300026329|Ga0209375_1091999All Organisms → cellular organisms → Bacteria1380Open in IMG/M
3300026331|Ga0209267_1097787All Organisms → cellular organisms → Bacteria1251Open in IMG/M
3300026332|Ga0209803_1158496All Organisms → cellular organisms → Bacteria869Open in IMG/M
3300026333|Ga0209158_1030756All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2324Open in IMG/M
3300026333|Ga0209158_1203168All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300026536|Ga0209058_1051900All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2331Open in IMG/M
3300026536|Ga0209058_1152424All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1081Open in IMG/M
3300027169|Ga0209897_1014372All Organisms → cellular organisms → Bacteria1085Open in IMG/M
3300027616|Ga0209106_1098483All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300027846|Ga0209180_10356027All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium834Open in IMG/M
3300028536|Ga0137415_10666886All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium852Open in IMG/M
3300028711|Ga0307293_10175914All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium681Open in IMG/M
3300030829|Ga0308203_1039249All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300030903|Ga0308206_1146831All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium565Open in IMG/M
3300030904|Ga0308198_1044975All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300030987|Ga0308155_1014348All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium678Open in IMG/M
3300031114|Ga0308187_10221001All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium674Open in IMG/M
3300031421|Ga0308194_10139934All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium737Open in IMG/M
3300031424|Ga0308179_1025760All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium673Open in IMG/M
3300031720|Ga0307469_10555467All Organisms → cellular organisms → Bacteria1018Open in IMG/M
3300031720|Ga0307469_11299491All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300031740|Ga0307468_101148317All Organisms → cellular organisms → Bacteria696Open in IMG/M
3300031753|Ga0307477_10569031All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium766Open in IMG/M
3300032180|Ga0307471_103660436All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300032205|Ga0307472_100969096All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium794Open in IMG/M
3300033417|Ga0214471_10062604All Organisms → cellular organisms → Bacteria3045Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil24.48%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil20.28%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil16.78%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil11.19%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.59%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.20%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.20%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.80%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.40%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.40%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.40%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.40%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.40%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.70%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.70%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.70%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.70%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cmEnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002911Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cmEnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009812Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60EnvironmentalOpen in IMG/M
3300010134Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010142Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300010896Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012376Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012379Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012380Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012392Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012395Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012398Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012400Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012403Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012407Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012409Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019249Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019255Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019259Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300022195Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025322Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026306Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)EnvironmentalOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300027169Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20 (SPAdes)EnvironmentalOpen in IMG/M
3300027616Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028711Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150EnvironmentalOpen in IMG/M
3300030829Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030903Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030904Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030987Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_144 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031114Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031424Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_150 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033417Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25385J37094_1018322323300002558Grasslands SoilMTQAYHQLVKRLLDGELSLSDLPPELRAEGAEALRLLGAV
JGI25383J37093_1020743813300002560Grasslands SoilMTTGYHPLVKRLLDGELSLAELPPELQGEGEEALRLVGAADRAPVALS
JGI25384J37096_1012667023300002561Grasslands SoilMSDHDFHPLVMQLLDGDLTIADLPAELRAQGEEALRLLAAVDRRPV
JGI25382J37095_1024743513300002562Grasslands SoilMTKQYHPLIKQLLDGELSPAALPPELRAEGDEALHVLAAVDRAP
JGI25390J43892_1008812313300002911Grasslands SoilMKTGYHALVKRLLDGELTLGELPPELRAEGEEALRLVGAADRA
JGI25617J43924_1009112033300002914Grasslands SoilMXTNYPRPVKQLLDGELTLADLPPELRAEGEEALGLVAGVDR
Ga0066683_1054119023300005172SoilMTTGYHPLVKRLLDGEVSLAELPRELQAEGEEALRLVGAAD
Ga0066680_1059623613300005174SoilMKAYDPLVKRLLDGELTLAELPPELQAEGSEALRLLGAVDRRAVVLPV
Ga0066679_1014679743300005176SoilMKTGYHALVKRLLDGELTLGELPPELRAEGEEALRLVGAADRAPVALSP
Ga0066688_1016380943300005178SoilMTREFHPLVKRLLDGELTLGDLPLELRPEGEEALRLLAPLDRAPV
Ga0066684_1065901323300005179SoilMSMSKTYHPLVKGLLDGERSLADLPPELRAEAEEAERLLGA
Ga0066678_1040251513300005181SoilMSAQYHPLVKRLLDGELSLAELPAELRAEGEQALRLIRGVDRAPVTLPATL
Ga0066676_1013303913300005186SoilVTMTDFHPLVKQLLDGEVTLADLPPGLRAEGEEALRLLGAV
Ga0066675_1006347253300005187SoilMTEHSERQFHPLVKQLLDGDITLADLPAELRAEGEEALRLLADLDRRPV
Ga0065705_1031303033300005294Switchgrass RhizosphereMSGKDFHPQVKQLLDGELSVADLPSELRAEGEEALRLLAMVDREPVTFPGL
Ga0066689_1011196613300005447SoilMKTGYHALVKRLLDGELTLGELPPELRAEGEEALRLVGAADRAP
Ga0066682_1016908513300005450SoilMSKAYHPQVKALLDGERSLADLPPELRAESDEAERLLGAVDRTP
Ga0070707_10038387313300005468Corn, Switchgrass And Miscanthus RhizosphereMSDHDFHPLVKQLLDGDLTLAELPAELRAEGEEALRLLAAADR
Ga0070698_10115282323300005471Corn, Switchgrass And Miscanthus RhizosphereMAGYHPLVKQVLDGELSLAVLPRDLRAEGEEAVRLIQAAD
Ga0070679_10167237223300005530Corn RhizosphereMTAFHPLVKQLLDGEITLADLPAELRAEGEEALRLLAAVD
Ga0066697_1017587013300005540SoilMMASYHPLVKRLLDGEVSLAELPPELQAEGEEALRLVGAAD
Ga0066692_1064850913300005555SoilMSEHEYHPLVKQLLDGDITSAELPAELRVQGEEALRLLGLVDR
Ga0066692_1069462323300005555SoilMMGYHPLVKRLLDGELSLAELPPELRAEGEEALRLLG
Ga0066698_1004718253300005558SoilMTTGYHPLVKRLLDGELSLADLPPELRVEGEDALRLVGAVDRAPVTL
Ga0066700_1058518213300005559SoilMTREFHPLVKRLLDGELTLGDLPLELRPEGEEALRLLAAL
Ga0066699_1022736543300005561SoilMSMSKTYHPLVKGLLDGERSLADLPPELRAEAEEAERLLGAV
Ga0066693_1016383723300005566SoilMTTDYHPLVKRLLDGELTLADLPSELRAEGAEALRTI
Ga0066702_1048371013300005575SoilMTETFHPLVKRLLDGELSLGDLPPGLRGEGAEALRLLGAVDR
Ga0066691_1003956953300005586SoilMSAQYHPLVKRLLDGELSLAELPAELRAEGEQALRLIRGVDRAPV
Ga0066691_1091635323300005586SoilMTREFHPLVKRLLDGELTLGDLPLELRPEGEEALRLLAPLDR
Ga0066696_1003746843300006032SoilMTETFHPLVKRLLDGELSLGDLPPGLRGEGAEALRLLGAVDRTPVALSVQL
Ga0066653_1012440033300006791SoilMSGHDFSPLVKQLLDGDITLADLPSELRAEGEAARRLL
Ga0066659_1001994613300006797SoilMKTGYHALVKRLLDGELTLGELPPELRAEGEEALRLVG
Ga0066659_1006084913300006797SoilMSMSKTYHPLVKGLLDGERSLADLPPELRAEAEEAERLLGAVDRTP
Ga0066659_1141337423300006797SoilMTETFHPLVKRLLDGDLSLGDLPAGLRGEGAEALRLLGALDRTPVALSAQ
Ga0075425_10044099943300006854Populus RhizosphereMMGFDPMVKRLLDGELSLAGLPPELRAEGEEALRLVGAANRAPVALS
Ga0075426_1044291213300006903Populus RhizosphereMTAGYHPLVKRLLDGELSLAGLPPELRAEGEEALRLVGAANRAP
Ga0075436_10065753623300006914Populus RhizosphereMTAGYHPLVKRLLDGELSLAGLPPELRAEGEEALRLVGAANRAPVA
Ga0075435_10099700723300007076Populus RhizosphereMSEREFHPLVKQLLDGDITLGELPAELRAEGEEALQLLGMVDRSAVA
Ga0075435_10131621113300007076Populus RhizosphereMSGNGFHPQVIQLLDGEITLADLPPALRAEGEEALRLLAAVDR
Ga0099791_1004681753300007255Vadose Zone SoilMKAYDPLVKRLLDGELTLAELPPELQAEGSEALRLLGAVDRR
Ga0099793_1000016813300007258Vadose Zone SoilMTKTYHPLVKRLLDGELSLSDLPLELRGEGAEALRLLGAVDRAP
Ga0066710_10097220613300009012Grasslands SoilMSMSKTYHPLVKGLLDGERSLADLPPELRAEAEEAE
Ga0114129_1333171923300009147Populus RhizosphereMTTGYHPLVKRLLDGELSLAELPPELRVEGEEALRLVGAADR
Ga0105067_102938513300009812Groundwater SandMSEPFHPLVKRLLDGELSLSELPPELVAQGAEAFRLLDAVDR
Ga0127484_103427823300010134Grasslands SoilMSGHDFHPLVKQLLDGDITLADLPSELRVEGEAALRLLAAVDR
Ga0127484_114109023300010134Grasslands SoilMTTGYHPLVKRLLDGELSLAELPPELQGEGEEALRLVGAADR
Ga0127483_111580123300010142Grasslands SoilMTREFHPLVKRLLDGELTLGDLPLELRPEGEEALRLLAALDSTPVT
Ga0134109_1002013113300010320Grasslands SoilMTQAYHQLVKRLLDGELSLSDLPAELRAEGAEALRLLGTVDRTPV
Ga0134109_1028655223300010320Grasslands SoilMTETLHPLVKRLLDGELSLGDLPPELRGEGAAALRLL
Ga0134109_1033329423300010320Grasslands SoilMSDFHPLVKQLLDGELTLAELPAELRAEGEEALRLIGAVDR
Ga0134084_1046024023300010322Grasslands SoilMSEHEFHPLVKQLLDGDITLAALPPELRAEGEEALRLLAAVDRS
Ga0134063_1058405113300010335Grasslands SoilMSGYDFHPLVKQLLDGDLTLADLPVELRAEGEEALRLLTAVDRRP
Ga0134071_1016305433300010336Grasslands SoilMTTGYHPLVKRLLDGELSLADLPPELRVEGEDALRL
Ga0134071_1061060113300010336Grasslands SoilMGYHPLVKRLLDGELSLAELPPELRAEGEEALRLLGAVD
Ga0134125_1147666613300010371Terrestrial SoilMTTGYHPLVKRLLDGEVSLAELPPELRAEGEEALRL
Ga0134123_1003812273300010403Terrestrial SoilMSEREFHPLVKQLLDGDVTLADLPAELRAEGEEALLILGAVDRRPVQLGDF
Ga0138111_107068213300010896Grasslands SoilMTTVYHPLVKRLLDGEVSLAELPRELQAEGEEALRLVGAADRAPVA
Ga0150983_1143706813300011120Forest SoilMTRDYHPLVKRLLDGEGTIADLPAELRAEGERALRVLGLVDRSPVVLSSAIEG
Ga0137382_1035582813300012200Vadose Zone SoilMTETFHSLVKRLLDRELSLSYLPPELRGEGAEALRLLGAVDR
Ga0137382_1044772313300012200Vadose Zone SoilMTKREFDPQVKQLLDGELTLADLPAELRQEGEEAL
Ga0137363_1157840023300012202Vadose Zone SoilMTESFHPVIKRLLDGELSRADVPAELRAEVEEALRLVTAVDRTEVRLT
Ga0137399_1015127913300012203Vadose Zone SoilMTDFHPQVRQLLDGDINLADLPPELRAEGEEALRLLAAVDREPVTLP
Ga0137374_1049473413300012204Vadose Zone SoilMTVADFDPRVKRLLDGELTLADLPSELRAEGQEALR
Ga0137370_1094646023300012285Vadose Zone SoilMTETLHPLVKRLLDGELSLGDLPPELRGEGAEALRLLGALDRT
Ga0137387_1014746513300012349Vadose Zone SoilMSGHELHPLVKQLLDGEITRADLPAELRAEGEAALRLLAGVDRTDV
Ga0137387_1017097043300012349Vadose Zone SoilMSKHEFHPLVKQLLDGDITLADLPPELRAEGDEALRLL
Ga0137366_1010631013300012354Vadose Zone SoilMSEYDFHPLVKQLLDGDITIADLPAELRAEGEEAL
Ga0137384_1014477053300012357Vadose Zone SoilMTEHEFHPLVKQLLDGDITLAALPPELRAEGKEAL
Ga0137385_1014134313300012359Vadose Zone SoilMTETFHSLVKRLLDGELSLSDLPPELRGEGAEALRLLGAVD
Ga0137375_1060037213300012360Vadose Zone SoilMSAKDFHPQVKQLLDGELTLADLPPELRAEGEEALHLLAGVDREPV
Ga0137361_1103797613300012362Vadose Zone SoilMSGHELHPLVKQLLDGDITLADLPAELRAEGEAAVR
Ga0134032_124332713300012376Grasslands SoilMMASYHPLVKRLLDGEVSLAELPPELQAEGEEALRLV
Ga0134058_119144013300012379Grasslands SoilMMAGYHPLVKQMLDGELSLADLPPELRGEGEEALRLVQAADRAPVALSP
Ga0134047_120299923300012380Grasslands SoilMSAQYHPLVKRLLDGELSLAELPAELRAEGEQALR
Ga0134043_111237913300012392Grasslands SoilMSAQYHPLVKRLLDGELSLAELPAELRAEGEQALRLIRGVDRAP
Ga0134044_104724513300012395Grasslands SoilMSGYDFHPLVKQLLDGDLTLADLPVELRAEGEEALRLLPAVDRRAVE
Ga0134051_133564023300012398Grasslands SoilMTETFHPLVKRLLDGELSLSDLPPELRGEGAEALRLLGAVDR
Ga0134048_137133713300012400Grasslands SoilMTETFHPLVKRLLDGELSLGDLPPGLRGEGAEALRLLGAVDRTPVALSVQLE
Ga0134049_124396023300012403Grasslands SoilMSAQYHPLVKRLLDGELSLAELPAELRAEGEQALRLIR
Ga0134050_144630823300012407Grasslands SoilMSAQYHPLVNRLLDGEPSLAELPAELRAEGEQALRLIRGVDRAPVTLPATLDRA*
Ga0134045_111544413300012409Grasslands SoilMTTGYHPLVKRVLDGELSLAELPPELRAEGEDALRLVAAVDRAP
Ga0137373_1003006013300012532Vadose Zone SoilMITGYHPLVKRLLDGELSLAELPPELRAEGEEALRLAGAADRAPVALS
Ga0137395_1018858813300012917Vadose Zone SoilMSGYEFHPLVKQLLDGDITLADLPAELRAEGEEALQL
Ga0137416_1096731613300012927Vadose Zone SoilMTTGYHPLVKRLLDGELSLAELPPELRAEGEEALHLVGAADRAPVA
Ga0137407_1189702213300012930Vadose Zone SoilMTTGYHPLVKRLLDGELSLAELPPELRAEGEEALH
Ga0137410_1006188513300012944Vadose Zone SoilMSGHEFHPLIKQLLDGDITLADLPPELRGEGEAALRLLAAVDRT
Ga0134110_1031262913300012975Grasslands SoilMTETLHPLVKRLLDGELSLGDLPPELRGEGAEALRLL
Ga0134076_1008631143300012976Grasslands SoilMNEREFHPEVRRLLDGEITIAELPLELRVEGEEALRLLAAV
Ga0134081_1000794453300014150Grasslands SoilMGYHPLVKRLLDGELSLAELPPELRAEGEEALRLLGAVDRAPVALS
Ga0134075_1016425623300014154Grasslands SoilMMAGYHPLVKQMLDGELSLADLPPELRGEGEEALRLVQAAD
Ga0134078_1003442643300014157Grasslands SoilMSLGYHPLVKRLLDGELSLAELPPELRAEGAEALRLVGAVDCT
Ga0134085_1009522913300015359Grasslands SoilMTKHEFDPQVRQLLDGELTLADLPAELRQEGEEALRLLAAVDREPV
Ga0132257_10074959413300015373Arabidopsis RhizosphereMSEREFHPLVKQLLDGDITLADLPAELRAEGEEALRILAAVDR
Ga0134074_100904533300017657Grasslands SoilMSERDFHPLVKQLLDGEVTIADLPAELRAEGEEALRLLTGVDRSPVELPP
Ga0134083_1016163623300017659Grasslands SoilMSEAFHPLVKQLLDGEITLAELPPELRTEGAAALRLLAAV
Ga0184618_1035736513300018071Groundwater SedimentLTMTDFHPQVKQLLDGEITLADLPPELRAEGEEALRL
Ga0184612_1040958223300018078Groundwater SedimentLTMTDFHPQVKQLLDGEITLADLPPELRAEGEEALHLLAA
Ga0066655_1023700833300018431Grasslands SoilMSKAYHPQVKALLDGERSLADLPPELRAESDEAERLLGAVDRT
Ga0066655_1104718313300018431Grasslands SoilMSEHEFHPLVKQLLDGDITLAALPPELRAEGEEALRLLAAVDRSVV
Ga0066662_1188818413300018468Grasslands SoilMTTGYHPLVKGLLDGELSLAELPPELRAEGEEALRLVG
Ga0066662_1229593013300018468Grasslands SoilMTREFHPLVKRLLDGELTLGDLPLELRPEAEEALRMLAALDRTPVTLSP
Ga0066669_1101277813300018482Grasslands SoilMTETFHPLVKRLLDGELSLSDLPLELRGEGAEALRLLG
Ga0066669_1176557713300018482Grasslands SoilMMASYHPLVKRLLDGEVSLAELPPELQAEGEEALRLVGAA
Ga0184648_119049813300019249Groundwater SedimentLTMTDFHPQVKQLLDGELTLADLPPELRAEGEEALRLLAAVDR
Ga0184643_145762313300019255Groundwater SedimentVTMIEFHPLVKQLLDGELTLADLPPELRRQGEAALRLLAAVDREPV
Ga0184646_144938113300019259Groundwater SedimentLTMTDFHPQVKQLLDGELTLADLPPELRAEGEAALRLLAAVDREPVTFP
Ga0179594_1001996253300020170Vadose Zone SoilMTTGYHPLVKRLLDGELSLAELPPELRAEGEEALRLVGAANRAPV
Ga0179594_1018784613300020170Vadose Zone SoilMSGYEFHPLVKQLLDGEITLADLPAELRAEGDEALQLLAGVE
Ga0222625_122783813300022195Groundwater SedimentMTKSDFHPQVKQLLDGELTLADLPPELRVEGEEALHLLAAVDREPVTFPG
Ga0209641_1013757543300025322SoilMTMTDFHPQVKRLLDGELTLADLRPELRAEGEEALRLLAA
Ga0209238_119319913300026301Grasslands SoilMNEREFHPEVRRLLDGEITIADLPLELRVEGEEALRLLA
Ga0209468_101768113300026306SoilMSGHDFHPLVKQLLDGDITLADLPSELRVEGEAALRLLAAV
Ga0209055_118522423300026309SoilMSHGYHPLVKQLLDGELSLAQLPPELRAEGAEALRLVGAVDRTP
Ga0209239_103378253300026310Grasslands SoilMTREFHPLVKRLLDGELTLGELPLELRPEGEEALRLLAPLDR
Ga0209761_109860913300026313Grasslands SoilMTETFHPLVKRLLDGELSLSDLPPELRGEGAEALGLLGA
Ga0209472_101660053300026323SoilMTQAYHQLVKRLLDGELSLSDLPPELRAEGAEALRLLGA
Ga0209375_109199913300026329SoilMSMSKTYHPLVKGLLDGERSLADLPPELRAEAEEAERLLGAVDRT
Ga0209267_109778713300026331SoilMSLGYHPLVKQLLDGELSLAELPPELRAEGAEALRLIGAVDRAPVVL
Ga0209803_115849623300026332SoilMTETFHSLVKRLLDGELSLSDLPPELRGEGAEALRLLGAVDR
Ga0209158_103075633300026333SoilMTETFHPLVKRLLDGELSLSDLPPELRGEGAEALGLLGAVDRAPVALSAAFE
Ga0209158_120316813300026333SoilMSAQYHPLVKRLLDGELSLAELPAELRAEGEQALRLIRGVDRA
Ga0209058_105190013300026536SoilMNEREFHPEVRRLLDGEITIADLPLELRVEGEEALRLLAA
Ga0209058_115242413300026536SoilMTREFHPLVKRVLDGELTLGDLPLELRPEAEEALRMLA
Ga0209897_101437213300027169Groundwater SandVTNPLIKRLLDGEIELADLPPELRSEGERALRLLDRL
Ga0209106_109848313300027616Forest SoilMMKTYHPQVKRLLDGELTLADLPRELRAEGEEALRPVAAVDRAPVT
Ga0209180_1035602713300027846Vadose Zone SoilMNAYDPLVKQLLDGELTLAELPPELQAEASEALRLLAAVDRRA
Ga0137415_1066688623300028536Vadose Zone SoilMTDFHPQVKQVLDGELTLAQLPPELRAQGEEAVRLLAAVDREPVTLPDTLD
Ga0307293_1017591413300028711SoilLTMTDFHPQVKQLLDGEITLADLPPELRAEGEEALRLLAAVDREPVTFPAL
Ga0308203_103924913300030829SoilMSGKDFHPQVKQLLDGEITLADLPSALRAEGEEALHLLAAVDREPVTFP
Ga0308206_114683113300030903SoilMTSDFHPQVKQLLDGELALADLPPELRAEGEEALRLL
Ga0308198_104497513300030904SoilMTMSDFHPQVKQLLDGELTLADLPPELRAEGEEALHLLVAV
Ga0308155_101434813300030987SoilMSGNSFNPQVKQLLDGEITLADLPPALRAEGEEALHLLAAVDR
Ga0308187_1022100123300031114SoilLTMTDFHPQVKQLLDGEITLADLPPELRAEGEEALRLLAAVD
Ga0308194_1013993413300031421SoilMTDFHPQVKQLLDGELTLADLAPELRAEGEEALRLLAAVDREPVTLPGTLGA
Ga0308179_102576023300031424SoilMTDFHPQVKQLLDGEITLADLPPELRAEGEEALRLLAAVD
Ga0307469_1055546733300031720Hardwood Forest SoilMTKREFDPQVKQLLDGELTLADLPAELRQEGEEALRL
Ga0307469_1129949123300031720Hardwood Forest SoilMSLGYHPLVKQLLDGELSLADLPLELRAEGAEALRLIGAVDRTSVVLS
Ga0307468_10114831713300031740Hardwood Forest SoilMAGYHPLVKQVLDGELSLADLPRDLRAEGEEAVRLIQAAN
Ga0307477_1056903123300031753Hardwood Forest SoilMTRSYHPLVKRLLDGEVSLADLPLELRAEGEDALRW
Ga0307471_10366043613300032180Hardwood Forest SoilMSLGYHPLVKQLLDGELSLAELPPELRAEGAVALRLVG
Ga0307472_10096909613300032205Hardwood Forest SoilMTEQYHPLIKQLLDGELSLAELPPGLKAEGERALQLLAAVD
Ga0214471_1006260463300033417SoilMTQRAFHPLVKLLLDGDITLADLPADLRAEGEEALRLLGAIDRT

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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