Metagenome / Metatranscriptome Family F051825

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051825
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	45 residues
Representative Sequence	VKAERGWHRSVTGVARRTFEAAFEDNIPFLASALSFDLLLTIIPFV
Number of Associated Samples	120
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.07 %
% of genes near scaffold ends (potentially truncated)	97.90 %
% of genes from short scaffolds (< 2000 bps)	88.11 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.804 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (26.573 % of family members)
Environment Ontology (ENVO)	Unclassified (46.853 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.944 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.35% β-sheet: 0.00% Coil/Unstructured: 48.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF12732	YtxH	69.93
PF01116	F_bP_aldolase	9.09
PF12706	Lactamase_B_2	6.29
PF02146	SIR2	1.40
PF02887	PK_C	1.40
PF00005	ABC_tran	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG0191	Fructose/tagatose bisphosphate aldolase	Carbohydrate transport and metabolism [G]	9.09
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	1.40
COG0846	NAD-dependent protein deacetylase, SIR2 family	Posttranslational modification, protein turnover, chaperones [O]	1.40

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.80 %
Unclassified	root	N/A	4.20 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.80 %
Unclassified	root	N/A	4.20 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.80 %
Unclassified	root	N/A	4.20 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	62.94 %
Unclassified	root	N/A	4.20 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	62.94 %
Unclassified	root	N/A	4.20 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	40.56 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	4.20 %
Unclassified	root	N/A	4.20 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	25.87 %
Gemmatimonadetes bacterium 13_2_20CM_2_65_7	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_65_7	14.69 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	4.20 %
Unclassified	root	N/A	4.20 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	25.87 %
Gemmatimonadetes bacterium 13_2_20CM_2_65_7	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_65_7	14.69 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	4.20 %
Unclassified	root	N/A	4.20 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	25.87 %
Gemmatimonadetes bacterium 13_2_20CM_2_65_7	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_65_7	14.69 %
Unclassified	root	N/A	4.20 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	2.80 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	25.87 %
Gemmatimonadetes bacterium 13_2_20CM_2_65_7	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_65_7	14.69 %
Unclassified	root	N/A	4.20 %
unclassified Gemmatimonas	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas	2.10 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.70 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	25.87 %
Gemmatimonadetes bacterium 13_2_20CM_2_65_7	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_65_7	14.69 %
Unclassified	root	N/A	4.20 %
Gemmatimonas sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	2.10 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002560\|JGI25383J37093_10031349	All Organisms → cellular organisms → Bacteria	1777	Open in IMG/M
3300002561\|JGI25384J37096_10159743	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300002561\|JGI25384J37096_10260361	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	505	Open in IMG/M
3300002911\|JGI25390J43892_10106245	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300004157\|Ga0062590_101332587	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	709	Open in IMG/M
3300005171\|Ga0066677_10751023	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300005172\|Ga0066683_10685562	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	609	Open in IMG/M
3300005180\|Ga0066685_10892964	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300005186\|Ga0066676_10740646	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	669	Open in IMG/M
3300005186\|Ga0066676_11126776	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	516	Open in IMG/M
3300005341\|Ga0070691_10215264	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300005446\|Ga0066686_10237802	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1227	Open in IMG/M
3300005451\|Ga0066681_10203903	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1184	Open in IMG/M
3300005451\|Ga0066681_10982492	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_65_7	504	Open in IMG/M
3300005554\|Ga0066661_10636266	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300005555\|Ga0066692_10054730	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2231	Open in IMG/M
3300005555\|Ga0066692_11006335	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	510	Open in IMG/M
3300005556\|Ga0066707_10070973	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2077	Open in IMG/M
3300005557\|Ga0066704_10307414	Not Available	1070	Open in IMG/M
3300005559\|Ga0066700_10012783	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	4433	Open in IMG/M
3300005566\|Ga0066693_10056965	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1320	Open in IMG/M
3300005576\|Ga0066708_10435491	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300005586\|Ga0066691_10125609	All Organisms → cellular organisms → Bacteria	1460	Open in IMG/M
3300005842\|Ga0068858_102441732	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_65_7	516	Open in IMG/M
3300005843\|Ga0068860_102274707	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	563	Open in IMG/M
3300005890\|Ga0075285_1017794	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300006031\|Ga0066651_10403601	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300006034\|Ga0066656_10188187	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1309	Open in IMG/M
3300006034\|Ga0066656_11133406	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300006796\|Ga0066665_10013689	All Organisms → cellular organisms → Bacteria	4832	Open in IMG/M
3300006796\|Ga0066665_10487822	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300006800\|Ga0066660_10224357	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300006846\|Ga0075430_100101734	All Organisms → cellular organisms → Bacteria	2399	Open in IMG/M
3300006854\|Ga0075425_100038430	All Organisms → cellular organisms → Bacteria	5337	Open in IMG/M
3300006854\|Ga0075425_100346112	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	1711	Open in IMG/M
3300006903\|Ga0075426_10596406	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300006954\|Ga0079219_10324941	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	970	Open in IMG/M
3300007076\|Ga0075435_100020798	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	5036	Open in IMG/M
3300009012\|Ga0066710_102853422	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_65_7	680	Open in IMG/M
3300009092\|Ga0105250_10391034	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_65_7	615	Open in IMG/M
3300009100\|Ga0075418_11904716	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	647	Open in IMG/M
3300009597\|Ga0105259_1181049	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_65_7	514	Open in IMG/M
3300010303\|Ga0134082_10073843	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1329	Open in IMG/M
3300010303\|Ga0134082_10126395	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1024	Open in IMG/M
3300010323\|Ga0134086_10322628	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	604	Open in IMG/M
3300010325\|Ga0134064_10081176	Not Available	1040	Open in IMG/M
3300010326\|Ga0134065_10357096	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	575	Open in IMG/M
3300010333\|Ga0134080_10210379	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300010335\|Ga0134063_10718435	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300010336\|Ga0134071_10147483	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1143	Open in IMG/M
3300010336\|Ga0134071_10286822	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	825	Open in IMG/M
3300010336\|Ga0134071_10624552	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300010336\|Ga0134071_10778735	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	510	Open in IMG/M
3300010337\|Ga0134062_10246587	Not Available	829	Open in IMG/M
3300010359\|Ga0126376_13185613	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	508	Open in IMG/M
3300010391\|Ga0136847_10890654	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	505	Open in IMG/M
3300010403\|Ga0134123_11551498	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	708	Open in IMG/M
3300011270\|Ga0137391_10805250	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	774	Open in IMG/M
3300011413\|Ga0137333_1133220	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300011430\|Ga0137423_1073518	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1015	Open in IMG/M
3300011443\|Ga0137457_1163993	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_65_7	744	Open in IMG/M
3300012039\|Ga0137421_1008986	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2164	Open in IMG/M
3300012198\|Ga0137364_11396539	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_65_7	518	Open in IMG/M
3300012200\|Ga0137382_10024227	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	3537	Open in IMG/M
3300012200\|Ga0137382_10450592	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_65_7	911	Open in IMG/M
3300012207\|Ga0137381_11617908	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_65_7	539	Open in IMG/M
3300012211\|Ga0137377_11110150	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	721	Open in IMG/M
3300012211\|Ga0137377_11393142	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_65_7	630	Open in IMG/M
3300012285\|Ga0137370_10290932	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	974	Open in IMG/M
3300012285\|Ga0137370_10637081	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300012349\|Ga0137387_10396851	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1000	Open in IMG/M
3300012349\|Ga0137387_10487505	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	895	Open in IMG/M
3300012351\|Ga0137386_11260644	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	514	Open in IMG/M
3300012359\|Ga0137385_10982451	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300012361\|Ga0137360_10975744	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300012398\|Ga0134051_1295499	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300012917\|Ga0137395_10842591	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	664	Open in IMG/M
3300012918\|Ga0137396_10072432	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2410	Open in IMG/M
3300012918\|Ga0137396_10713760	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_65_7	739	Open in IMG/M
3300012922\|Ga0137394_10900898	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300012925\|Ga0137419_10210928	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300012927\|Ga0137416_10935106	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	772	Open in IMG/M
3300012930\|Ga0137407_12232070	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	523	Open in IMG/M
3300012931\|Ga0153915_13120577	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	539	Open in IMG/M
3300012931\|Ga0153915_13476248	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	510	Open in IMG/M
3300012976\|Ga0134076_10284896	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_65_7	712	Open in IMG/M
3300012986\|Ga0164304_11702423	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	527	Open in IMG/M
3300014150\|Ga0134081_10211525	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	663	Open in IMG/M
3300014154\|Ga0134075_10392533	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_65_7	612	Open in IMG/M
3300014157\|Ga0134078_10628452	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	518	Open in IMG/M
3300014308\|Ga0075354_1014198	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300014874\|Ga0180084_1014559	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1402	Open in IMG/M
3300015241\|Ga0137418_10225202	All Organisms → cellular organisms → Bacteria	1606	Open in IMG/M
3300015241\|Ga0137418_10225207	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1606	Open in IMG/M
3300015241\|Ga0137418_10368773	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300015359\|Ga0134085_10205075	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	849	Open in IMG/M
3300017654\|Ga0134069_1277380	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	589	Open in IMG/M
3300017657\|Ga0134074_1177146	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	751	Open in IMG/M
3300018077\|Ga0184633_10590507	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_65_7	525	Open in IMG/M
3300018082\|Ga0184639_10398621	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300018431\|Ga0066655_11180691	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300018433\|Ga0066667_10699653	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	850	Open in IMG/M
3300019789\|Ga0137408_1404247	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300020015\|Ga0193734_1067748	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	633	Open in IMG/M
3300021073\|Ga0210378_10379388	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	525	Open in IMG/M
3300021086\|Ga0179596_10344551	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_65_7	748	Open in IMG/M
3300021178\|Ga0210408_10691169	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300024330\|Ga0137417_1362685	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1328	Open in IMG/M
3300026300\|Ga0209027_1155502	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_65_7	774	Open in IMG/M
3300026300\|Ga0209027_1287182	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_65_7	530	Open in IMG/M
3300026307\|Ga0209469_1041064	Not Available	1498	Open in IMG/M
3300026323\|Ga0209472_1265498	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	547	Open in IMG/M
3300026324\|Ga0209470_1111048	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1223	Open in IMG/M
3300026329\|Ga0209375_1034222	All Organisms → cellular organisms → Bacteria	2705	Open in IMG/M
3300026334\|Ga0209377_1159630	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300026335\|Ga0209804_1280491	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	580	Open in IMG/M
3300026523\|Ga0209808_1003456	All Organisms → cellular organisms → Bacteria	8098	Open in IMG/M
3300026523\|Ga0209808_1141172	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	949	Open in IMG/M
3300026527\|Ga0209059_1344862	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_65_7	505	Open in IMG/M
3300026529\|Ga0209806_1001593	All Organisms → cellular organisms → Bacteria	14836	Open in IMG/M
3300026529\|Ga0209806_1002893	All Organisms → cellular organisms → Bacteria	10512	Open in IMG/M
3300026530\|Ga0209807_1126452	Not Available	1028	Open in IMG/M
3300026540\|Ga0209376_1277393	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	690	Open in IMG/M
3300026548\|Ga0209161_10282549	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	828	Open in IMG/M
3300026550\|Ga0209474_10022472	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	4852	Open in IMG/M
3300026552\|Ga0209577_10504483	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300027273\|Ga0209886_1013254	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300027616\|Ga0209106_1095954	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300027765\|Ga0209073_10301023	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300027775\|Ga0209177_10284522	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300027846\|Ga0209180_10797269	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	506	Open in IMG/M
3300028072\|Ga0247675_1023798	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	884	Open in IMG/M
3300028381\|Ga0268264_11872869	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	610	Open in IMG/M
3300030620\|Ga0302046_11264898	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_65_7	578	Open in IMG/M
3300031170\|Ga0307498_10492960	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_65_7	500	Open in IMG/M
3300031226\|Ga0307497_10010618	All Organisms → cellular organisms → Bacteria	2605	Open in IMG/M
3300031720\|Ga0307469_11142936	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	733	Open in IMG/M
3300031720\|Ga0307469_11831033	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	587	Open in IMG/M
3300031753\|Ga0307477_10334431	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300031962\|Ga0307479_10195063	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1994	Open in IMG/M
3300032174\|Ga0307470_10310622	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1074	Open in IMG/M
3300032180\|Ga0307471_104240729	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_65_7	506	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.01%
Host-Associated	Host-Associated	6.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.62%
Aquatic	Environmental → Aquatic	8.39%
Plants	Host-Associated → Plants	6.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.62%
Sediment	Environmental → Aquatic → Sediment	5.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.90%
Freshwater	Environmental → Aquatic → Freshwater	2.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.10%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.90%
Loam	Environmental → Terrestrial → Soil → Loam	2.10%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.10%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.40%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.70%
Lake	Environmental → Aquatic → Freshwater → Lake	0.70%
Sand	Environmental → Terrestrial → Soil → Sand	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.46%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	32.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.10%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.40%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.40%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.70%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.70%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.70%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	26.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.58%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	13.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.29%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.20%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.20%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.10%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.40%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.40%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.70%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.70%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.70%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.70%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005890	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009597	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT299	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011413	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT231_2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300012039	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012398	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014308	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1	Environmental	Open in IMG/M
3300014874	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_2_16_10D	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027273	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028072	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK16	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25383J37093_100313491	3300002560	Grasslands Soil	VNGEGGWHRTVTGVVRRTLEAAYEDNIPFLAGALSFDILLTAIPFV
JGI25384J37096_101597431	3300002561	Grasslands Soil	VNPEGGWHRTVTGVVRRTLEAAYEDNIPFLASAVAFDVLL
JGI25384J37096_102603612	3300002561	Grasslands Soil	VRHEGGWHRSVTGVVRRTLEAAFEDNIPFLASALSFDLLLTTLPFVILLL
JGI25390J43892_101062453	3300002911	Grasslands Soil	VKAQGGWHRSPTGVVRRTLEAAFEDNIPFLAGALSFDLLLTIIPFVAVLLAAVGYLVEHQ
Ga0062590_1013325871	3300004157	Soil	VNRDGGWHDSITGIGRRTLQAAYEDNIPFLAGALSFDLLLTTIPFIVLLLAV
Ga0066677_107510232	3300005171	Soil	VKAQGGWHRSPTGVVRRTLEAAFEDNIPFLAGALSFDLLLTIIPFVAVL
Ga0066683_106855621	3300005172	Soil	VKAERGWHRSVTGVARRTFEAAFEDNIPFLASALSFDLLLTIIPFVAMLLATV
Ga0066685_108929641	3300005180	Soil	VKAERGWHRSVTGIARRTFEAAFEDNIPFLASALSFDLLLTIIPFVALLLA
Ga0066676_107406461	3300005186	Soil	VNGGGEGGWHRTVTGVVRRTLEAAYEDNVPFLASAVSFDILL
Ga0066676_111267762	3300005186	Soil	VTLEGGWHRSITGVIRRTLEAAYEDNIPFLSSALAFDFLLTAIPFVAVL
Ga0070691_102152641	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	VNGEGGWHRTVTGVVRRTLEAAYEDNIPFLAGALSFDIILTAIPF
Ga0066686_102378023	3300005446	Soil	VRHEGGWHRSVTGVVRRTLEAAFEDNIPFLASALSFDLLLTTLPFV
Ga0066681_102039031	3300005451	Soil	VKTQGGWHRSPTGVVRRTLEAAYEDNIPFLAGALSFDLLLTI
Ga0066681_109824921	3300005451	Soil	VNREGGWHRTVTGVVRRTLEAAYEDNIPFLASAVSFDILLTAIP
Ga0066661_106362661	3300005554	Soil	VNGEGGWHRTVTGVIRRTLEAAYEDNIPFLASAVSFDILLTAIPFVGLVLAV
Ga0066692_100547301	3300005555	Soil	VKAEGGWHRSLTGIVRRTLEAAYEDNIPFLASALSFDLLLTIIPFVAVLLA
Ga0066692_110063351	3300005555	Soil	VKAEGGWHQSLTGIARRTFEAAFEDNIPFLASALSFDLLLTIIPF
Ga0066707_100709734	3300005556	Soil	VKADGGWHRSLTGIVRRTVEAAYEDNIPFLASALSFDLLLTIIPFV
Ga0066704_103074143	3300005557	Soil	VRAEAGWHRSVTGVVRRTLEAAYEDNIPFLASALS
Ga0066700_100127836	3300005559	Soil	VKAQGGWHRSPTGVVRRTLEAAFEDNIPFLAGALSFDLLLTIIPFV
Ga0066693_100569651	3300005566	Soil	VKAQGGWHRSPTGVVRRTLEAAYEDNIPFLAGALSF
Ga0066708_104354911	3300005576	Soil	VKAQGGWHRSPTGVVRRTLEAAYEDNIPFLAGALSFDL
Ga0066691_101256093	3300005586	Soil	VNREGGWHNSILGVARRTLEAAFEDNIPFLASALSFDLLL
Ga0068858_1024417321	3300005842	Switchgrass Rhizosphere	VNGEGGWHRTVTGVIRRTLEAAYEDNIPFLAGALSFDIILTAI
Ga0068860_1022747071	3300005843	Switchgrass Rhizosphere	VNRDGGWHDSITGIGRRTLQAAYEDNIPFLAGALSFDLLLTTIPFIVLL
Ga0075285_10177941	3300005890	Rice Paddy Soil	VRAEGGWHRSVTGIARRTFEAAFEDNIPFLASALSFDLLLTV
Ga0066651_104036011	3300006031	Soil	VNGAGGGEGGWHRTVTGVVRRTLEAAYEDNIPFLA
Ga0066656_101881873	3300006034	Soil	VKAEGGWHQSLTGIARRTFEAAFEDNIPFLASALSFDLLLTIIPFV
Ga0066656_111334062	3300006034	Soil	VNGEGGWHRTVTGVVRRTLEAAYEDNIPFLAGALSFDILLTAIPFVG
Ga0066665_100136891	3300006796	Soil	VRAEAGWHRSVTGVVRRTLEAAYEDNIPFLASALSF
Ga0066665_104878223	3300006796	Soil	VNGEGGWHRTVTGVIRRTLEAAYEDNIPFLAGALSFDILLTAIPFVGLVL
Ga0066660_102243573	3300006800	Soil	VNGAGGGEGGWHRTVTGVVRRTLEAAYEDNIPFLAS
Ga0079221_115391191	3300006804	Agricultural Soil	VKAQGGWHRSPTGVVRRTLEAAFEDNIPFLAGALSFDLLLTIIPFVAVLLAALGYLVEHQ
Ga0075430_1001017344	3300006846	Populus Rhizosphere	VNGEGGWHRTVTGIVRRTIEAAYEDNIPFLAGALSFD
Ga0075425_1000384307	3300006854	Populus Rhizosphere	VKAERGWHQSVTGVARRTFEAAFEDNIPFLASALSFDLLLTIIPFVALLL
Ga0075425_1003461121	3300006854	Populus Rhizosphere	MKSRFVEGWHQSVWGVIKRTLELTYEDNVPFLASALSFDVILTSIPF
Ga0075426_105964061	3300006903	Populus Rhizosphere	VKAERGWHQSVTGVARRTFEAAFEDNIPFLASALSFDLLLTIIPFVA
Ga0079219_103249411	3300006954	Agricultural Soil	VKAEGGWHQSLTGIARRTFEAAYEDNIPFLASALSFDLLLTIIPFV
Ga0075435_1000207987	3300007076	Populus Rhizosphere	VKAERGWHQSVTGIARRTFEAAFEDNIPFLASALSFDLLLTII
Ga0066710_1028534223	3300009012	Grasslands Soil	VNGEGGWHRTVTGVIRRTLEAAYEDNIPFLAGALSFDILL
Ga0105250_103910341	3300009092	Switchgrass Rhizosphere	VNGEGGWHRTVTGVVRRTLEAAYEDNIPFLAGALSFDIIL
Ga0075418_119047161	3300009100	Populus Rhizosphere	VKREGGWHRSVTGILSRTLEAAVEDNIPFLASALS
Ga0105259_11810491	3300009597	Soil	VNGEGGWHRTATGVVRRTLEAAYEDNIPFLAGALSFDILLTAIPFVGLVL
Ga0134082_100738433	3300010303	Grasslands Soil	VKAEAGWHRSVTGVVRRTLEAAYEDNIPFLASALSF
Ga0134082_101263951	3300010303	Grasslands Soil	VKTQGGWHRSPTGVVRRTLEAAYEDNIPFLAGALSFD
Ga0134086_103226281	3300010323	Grasslands Soil	VKAERGWHRSVTGIARRTFEAAFEDNIPFLASALSFDLL
Ga0134064_100811761	3300010325	Grasslands Soil	VNGGGEGGWHRTVTGVVRRTLEAAYEDNIPFLAGALSFDILLTAIPFVGLV
Ga0134065_103570961	3300010326	Grasslands Soil	VKAERGWHRSVTGVARRTFEAAFEDNIPFLASALSFDLLLTIIPFVAML
Ga0134080_102103791	3300010333	Grasslands Soil	VNRESGWHGSIPGIARRTIEAAFEDNIPFLASALSFDLLLTTIP
Ga0134063_107184353	3300010335	Grasslands Soil	VKAERGWHRSVTGVARRTFEAAFEDNIPFLASALSFDLLLTII
Ga0134071_101474833	3300010336	Grasslands Soil	VNGEGGGWHRTVTGVVRRTLEAAYEDNIPFLAGALSFDIL
Ga0134071_102868221	3300010336	Grasslands Soil	VKAERGWHRSVTGVARRTFEAAFEDNIPFLASALSFDLLLTIIPFVA
Ga0134071_106245522	3300010336	Grasslands Soil	VTRAGGWHRSVTGVVRRTAEAAFEDNIPFLASALSFDFLLTLIPFIVLLLAVVG*
Ga0134071_107787351	3300010336	Grasslands Soil	VRHEGGWHRSVTGVVRRTLEAAFEDNIPFLASALSF
Ga0134062_102465873	3300010337	Grasslands Soil	VRHAAGWHQSVRGVVRRTLEAAFEDNIPFLASALAFDLL
Ga0126376_131856131	3300010359	Tropical Forest Soil	MTRKIVEGWHQSLWGVVKRTLELAYEDRIPFLASALSFDVILTSIPFLVL
Ga0136847_108906543	3300010391	Freshwater Sediment	VNRDGGWHHSIAGVGRRTLEASYEDNIAFLASGLSFDLLLTTI
Ga0134123_115514981	3300010403	Terrestrial Soil	VRGDGGWHRSIIGVVRRTLEAAVEDNIPFLASAVSFDLLLTAIPFAVLLLGA
Ga0137391_108052503	3300011270	Vadose Zone Soil	VKAERGWHQSVTGIARRTFEAAFEDNIPFLASALSFDLLLTIIPFVALLLAT
Ga0137333_11332202	3300011413	Soil	VTTDGGWHSSITGVGRRTLEAAYEDNLPFLAGALAFDLLLTSIPLIAVLLAVASYLVHHQITTY
Ga0137423_10735181	3300011430	Soil	VNGKGGWHRTVTGVVRRTFEAAYEDNMPFLAGAPAFDI
Ga0137457_11639931	3300011443	Soil	VNGEGGWHRTVTGVVRRTIEAAYEDNIPFLAGALSFDILLTAI
Ga0137421_10089864	3300012039	Soil	VNGEGGWHRTVTGVVRRTFEAAYEDNIPFLAGALAFDILL
Ga0137364_113965391	3300012198	Vadose Zone Soil	VNGEGGWHRTVTGIIRRTLEAAYEDNIPFLAGALSFDI
Ga0137382_100242275	3300012200	Vadose Zone Soil	VKTQGGWHRSPTGVVRRTLEAAYEDNIPFLAGALSFDLLLTII
Ga0137382_104505923	3300012200	Vadose Zone Soil	VNGEGGWHRTATGVARRTLEAAYEDNIPFLASAVSFDILLTAIPFV
Ga0137381_116179081	3300012207	Vadose Zone Soil	VNGEGGWHRTVTGVIRRTLEAAYEDNIPFLASAVSFDILLTTI
Ga0137377_111101503	3300012211	Vadose Zone Soil	VKAERGWHRSVTGVARRTFEAAFEDNIPFLASALSFDLLLTIIPFV
Ga0137377_113931421	3300012211	Vadose Zone Soil	VNREGGWHRTVTGVVRRTLEAAYEDNIPFLAGALSFDILLT
Ga0137370_102909323	3300012285	Vadose Zone Soil	VKAQGGWHRSPTGVVRRTLEAAYEDNIPFLAGALSFDLLLTIIPFV
Ga0137370_106370811	3300012285	Vadose Zone Soil	VKAEHGWHQSVTGIARRTFEAAFEDNIPFLASALSFDLLLTIIPFVAM
Ga0137387_103968511	3300012349	Vadose Zone Soil	VNRESGWHGSITGIARRTIEAAFEDNIPFLASALSFDLLLTTI
Ga0137387_104875051	3300012349	Vadose Zone Soil	VNAQGGWHRSPTGVVRRTLEAAFEDNIPFLAGALSFDLLLTIIP
Ga0137386_112606443	3300012351	Vadose Zone Soil	VNREGGWHNSIPGVVRRTLEATFEDNIPFLASALSF
Ga0137385_109824511	3300012359	Vadose Zone Soil	VKAERGWHQSVTGIARRTFEAAFEDNIPFLASALSFDLLLTIIPFVAMLL
Ga0137360_109757441	3300012361	Vadose Zone Soil	VKAERGWHQSVTGIARRTFEAAFEDNIPFLASALSFDLLLTIIPFVAMLLAT
Ga0134051_12954992	3300012398	Grasslands Soil	VKAERGWHRSVTGVARRTFEAAFEDNIPFLASALSFDLLLTIIPFVAMLLATV*
Ga0137395_108425913	3300012917	Vadose Zone Soil	VKAERGWHRSVTGIARRTFEAAFEDNIPFLASALSFDLLL
Ga0137396_100724321	3300012918	Vadose Zone Soil	VKAERGWHRSVTGIARRTFEAAFEDNIPFLASALS
Ga0137396_107137601	3300012918	Vadose Zone Soil	VNGEGGWHRTVTGVVRRTLEAAYEDNIPFLAGALSFDIL
Ga0137394_109008981	3300012922	Vadose Zone Soil	VKVERGWHRSLAGIARRTFDAAFEDNIPFLASALSFDLL
Ga0137419_102109281	3300012925	Vadose Zone Soil	VNHEGGWHRSPWGIVRRTLEAAFEDNIPFLASALSFDLLLTAIPFLVL
Ga0137416_109351063	3300012927	Vadose Zone Soil	VKAEGGWHRSVIGVVRRTLEAAYEDNIPFLASALSFDLLLTVIPFVA
Ga0137407_122320701	3300012930	Vadose Zone Soil	VTLEGGWHRSITGVIRRTLEAAYEDNIPFLSSALAFDFLLTAIPFVAVLL
Ga0153915_131205772	3300012931	Freshwater Wetlands	MRAARGWHQSFWGVVKRTIEGAYEDNLPFLASALSFDVILTAIPFLV
Ga0153915_134762481	3300012931	Freshwater Wetlands	MTARGARGWHQSVWGVVKRTLEGAYEDNLPFLASALSFDVILTSIPFL
Ga0134076_102848963	3300012976	Grasslands Soil	VNPEGGWHRTVTGVVRRTLEAAYEDNIPFLASAVAFDVLLTAIPFVGLV
Ga0164304_117024232	3300012986	Soil	VKRDGGWHRSPLGVIRRTLEAAFEDNMPFLASALSFDLLLTALPFV
Ga0134081_102115253	3300014150	Grasslands Soil	VKAQGGWHRSPTGVVRRTLEAAFEDNIPFLAGALSFDLLLTIIPFVAVLLAMVGYLV
Ga0134075_103925333	3300014154	Grasslands Soil	VNREGGWHRTVTGVVRRTLEAAYEDNIPFLASAVAFDILLTAIPF
Ga0134078_106284523	3300014157	Grasslands Soil	VKAQGGWHRSPTGVVRRTLEAAYEDNIPFLAGALSFDLLLT
Ga0075354_10141983	3300014308	Natural And Restored Wetlands	VIRDAGWHRSVGGVVRRTFDAAVEDNVPFLASALSFDLLLTIPPFALLVLGVLG
Ga0180084_10145594	3300014874	Soil	VTTDGGWHSSITGVGRRTLEAAYEDNLPFLAGALAFDLLLTSIPLIAVLLAVASYLVH
Ga0137418_102252021	3300015241	Vadose Zone Soil	VKAERGWHRSVTGIGRRTFEAAFEDNIPFLASALSFDLLLTIIPFVA
Ga0137418_102252071	3300015241	Vadose Zone Soil	VKAERGWHRSVTGIARRTFEAAFEDNIPFLASALSFDLLLTIIPFVA
Ga0137418_103687733	3300015241	Vadose Zone Soil	VNPEGGWHRSPWGIVRRTLEAAFEDNIPFLASALSFDLLLTAIPFLVL
Ga0134085_102050751	3300015359	Grasslands Soil	VKAERGWHRSVTGIARRTFEAAFEDNIPFLASGLSFD
Ga0134069_12773801	3300017654	Grasslands Soil	VKADAGWHRSVAGIARRTFEAAFEDNIPFLASALSFDLLLTMIP
Ga0134074_11771461	3300017657	Grasslands Soil	VRPEGGWHRSVTGVARRTVEAAFEDNIPFLASALSFDLLLTLIPFVALLLAAV
Ga0184633_105905073	3300018077	Groundwater Sediment	VNREGGWHRTVTGVIRRTLEAAYEDNIPFLAGALSFDILLTA
Ga0184639_103986211	3300018082	Groundwater Sediment	VSANGGWHRSVPGVIRRTYEAALEDNISFLASAIAFDLLLTAIPFVVLLLGFVGYL
Ga0066655_111806911	3300018431	Grasslands Soil	VKAERGWHRSVTGVARRTFEAAFEDNIPFLASALSFD
Ga0066667_106996533	3300018433	Grasslands Soil	VKADGGWHRSLTGIVRRTVEAAYEDNIPFLASALSFDLL
Ga0137408_14042473	3300019789	Vadose Zone Soil	VKAERGWHRSVTGIARRTLEAAFEDNIPFLASALSFDLLLTIIP
Ga0193734_10677481	3300020015	Soil	VTLEGGWHRSVTGVIRRTIEAAYEDNIPFLSSALAFDFLLTVIPFVAVLLATVGY
Ga0210378_103793882	3300021073	Groundwater Sediment	VTLEGGWHRSVTGVIRRTIEAAYEDNVPFLASALAFDILLTAIPFV
Ga0179596_103445511	3300021086	Vadose Zone Soil	VNGEGGWHRTVTGVVRRTIEAAYEDNIPFLAGALSFDIL
Ga0210408_106911693	3300021178	Soil	VKAERGWHRSVTGIARRTFEAAFEDNIPFLASALSFDLLLTIIPFV
Ga0137417_13626853	3300024330	Vadose Zone Soil	VKAEGGWHRSVIGVVRRTLEAAYEDNIPFLASALSFD
Ga0209027_11555021	3300026300	Grasslands Soil	VNGEGGWHRTVTGIIRRTLEAAYEDNIPFLAGALSFDILLTAIPFVG
Ga0209027_12871821	3300026300	Grasslands Soil	VNGEGGWHRTATGVARRTLEAAYEDNIPFLASAVSFDILLTAIPFVGLVL
Ga0209469_10410641	3300026307	Soil	VNGGGEGGWHRTVTGVVRRTLEAAYEDNIPFLAGAL
Ga0209472_12654983	3300026323	Soil	VKAQGGWHRSPTGVVRRTLEAAYEDNIPFLAGALS
Ga0209470_11110481	3300026324	Soil	VKAERGWHRSVTGVARRTFEAAFEDNIPFLASALSFDLLLTIIPFVAM
Ga0209375_10342221	3300026329	Soil	VKAERGWHQSVTGIARRTFEAAFEDNIPFLASALSFDLLLTIIPFVAMLLATV
Ga0209377_11596303	3300026334	Soil	VRHAAGWHQSVRGVVRRTLEAAFEDNIPFLASALAFDLLLTAI
Ga0209804_12804911	3300026335	Soil	VKAQGGWHRSPTGVVRRTLEAAFEDNIPFLAGALSFDLLLTIIPFVAVLLAMVGYLVE
Ga0209808_100345610	3300026523	Soil	VKAERGWHQSVTGVARRTFEAAFEDNIPFLASALSFDLLLTIIPFV
Ga0209808_11411723	3300026523	Soil	VKAQGGWHRSATGVVRRTLEAAFEDNIPFLAGALSFDLLLTIIPFV
Ga0209059_13448622	3300026527	Soil	VNGAGGGEGGWHRTVTGVVRRTLEAAYEDNIPFLASAV
Ga0209806_10015931	3300026529	Soil	VRAEAGWHRSVTGVVRRTLEAAYEDNIPFLASALSFDLLLTVIP
Ga0209806_10028931	3300026529	Soil	VKGDGGWHRSVIGVVRRTLEAAYEDNIPFLASALSFDLLLTVIP
Ga0209807_11264523	3300026530	Soil	VRAEAGWHRSVTGVVRRTLEAAYEDNIPFLASALSFD
Ga0209376_12773933	3300026540	Soil	VKAERGWHRSVTGIARRTFEAAFEDNIPFLASALSFDLLLTIIPFVALL
Ga0209161_102825493	3300026548	Soil	VKTQGGWHRSPTGVVRRTLEAAYEDNIPFLAGALSFDLLLTIIP
Ga0209474_100224726	3300026550	Soil	VKAQGGWHRSPTGVVRRTLEAAYEDNIPFLAGALSFDLLLTIIPFVAVL
Ga0209577_105044833	3300026552	Soil	VNGAGGGEGGWHRTVTGVVRRTLEAAYEDNIPFLASAVS
Ga0209886_10132541	3300027273	Groundwater Sand	VRVDGGWHRSVAGVVRRTFEAAVEDNIPFLASAVSFDLLLATIPFA
Ga0209106_10959541	3300027616	Forest Soil	VKVERGWHRSITGIARRTFEAAFEDNIPFLASALSFDLLL
Ga0209073_103010233	3300027765	Agricultural Soil	VKAEGGWHQSLTGIARRTFEAAYEDNIPFLASALSF
Ga0209177_102845221	3300027775	Agricultural Soil	VKAEGGWHQSLTGIARRTFEAAYEDNIPFLASALSFDLLLTIIP
Ga0209180_107972692	3300027846	Vadose Zone Soil	VNRDAGWHRTPLGVIRRTLEAAVEDNIPFLASALSFDLLLTA
Ga0247675_10237981	3300028072	Soil	MRTKLVEGWHQSAWGVIKRTLELAYEDNIPFLASALSF
Ga0268264_118728693	3300028381	Switchgrass Rhizosphere	VNRDGGWHDSITGIGRRTLQAAYEDNIPFLAGALSFDLLLTT
Ga0302046_112648981	3300030620	Soil	VNGEGGWHRTVTGVIRRTVEAAYEDNIPFLAGALSFDILLTAIPFVGLVLAVV
Ga0307498_104929602	3300031170	Soil	VISEGGWHRTVTGVVRRTLEAAYEDNVPFLASAVSFDILLTAIPFVGLVLAVVG
Ga0307497_100106184	3300031226	Soil	VNGEGGWHRTVTGVVRRTLEAAYEDNIPFLAGALSFDILLTAIP
Ga0307469_111429361	3300031720	Hardwood Forest Soil	VKPEGGWHQSLTGIARRTFEAAFEDNIPFLASALSFDLLLTIIPFVALLLAT
Ga0307469_118310331	3300031720	Hardwood Forest Soil	VKNGIDRVNRDRGWDDSIAGIGRRTLEAAYEDNIPFLAGGLSFDLLLTTI
Ga0307477_103344311	3300031753	Hardwood Forest Soil	VKAERGWHQSVTGIARRTFEAAFEDNIPFLASALSF
Ga0307479_101950631	3300031962	Hardwood Forest Soil	VKAQGGWHRSPTGVVRRTLEAAFEDNIPFLAGALSFDLLLTIIPFVAVLLAA
Ga0307470_103106221	3300032174	Hardwood Forest Soil	VKPEGGWHQSLTGIARRTFEAAFEDNIPFLASALSFDLLLTIIPF
Ga0307471_1042407292	3300032180	Hardwood Forest Soil	VNGEGGWHRTVTGVIRRTLEAAYEDNIPFLASAVSFDILLTAIPFVGLVLAVVG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051825

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences