NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F051821

Metagenome Family F051821

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F051821
Family Type Metagenome
Number of Sequences 143
Average Sequence Length 46 residues
Representative Sequence TQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRVSL
Number of Associated Samples 100
Number of Associated Scaffolds 143

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 76.92 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (99.301 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(17.483 % of family members)
Environment Ontology (ENVO) Unclassified
(35.664 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(57.343 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 75.56%    β-sheet: 0.00%    Coil/Unstructured: 24.44%
Feature Viewer
Powered by Feature Viewer

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 143 Family Scaffolds
PF00082Peptidase_S8 24.48
PF13242Hydrolase_like 16.78
PF13344Hydrolase_6 11.89
PF07883Cupin_2 2.10
PF01636APH 2.10
PF00561Abhydrolase_1 1.40
PF03823Neurokinin_B 0.70
PF04675DNA_ligase_A_N 0.70
PF13670PepSY_2 0.70
PF01590GAF 0.70

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 143 Family Scaffolds
COG1793ATP-dependent DNA ligaseReplication, recombination and repair [L] 0.70

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.30 %
UnclassifiedrootN/A0.70 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000033|ICChiseqgaiiDRAFT_c0716518All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi944Open in IMG/M
3300000956|JGI10216J12902_108890621All Organisms → cellular organisms → Bacteria722Open in IMG/M
3300000956|JGI10216J12902_108965234All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium503Open in IMG/M
3300005166|Ga0066674_10169301All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1035Open in IMG/M
3300005166|Ga0066674_10418761All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300005178|Ga0066688_10502601All Organisms → cellular organisms → Bacteria780Open in IMG/M
3300005181|Ga0066678_10514476All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300005336|Ga0070680_100188951All Organisms → cellular organisms → Bacteria1735Open in IMG/M
3300005336|Ga0070680_100241597All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1526Open in IMG/M
3300005340|Ga0070689_101396194All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300005343|Ga0070687_100496626All Organisms → cellular organisms → Bacteria820Open in IMG/M
3300005345|Ga0070692_10053150All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae2111Open in IMG/M
3300005345|Ga0070692_10619475All Organisms → cellular organisms → Bacteria718Open in IMG/M
3300005345|Ga0070692_10697955All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi682Open in IMG/M
3300005364|Ga0070673_101000109All Organisms → cellular organisms → Bacteria779Open in IMG/M
3300005406|Ga0070703_10018055All Organisms → cellular organisms → Bacteria2036Open in IMG/M
3300005444|Ga0070694_100095841All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae2090Open in IMG/M
3300005444|Ga0070694_100273068All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1286Open in IMG/M
3300005444|Ga0070694_100285621All Organisms → cellular organisms → Bacteria1259Open in IMG/M
3300005444|Ga0070694_100294548All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1241Open in IMG/M
3300005445|Ga0070708_102230528All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300005446|Ga0066686_10055450All Organisms → cellular organisms → Bacteria2433Open in IMG/M
3300005446|Ga0066686_11037269All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300005467|Ga0070706_100019473All Organisms → cellular organisms → Bacteria6258Open in IMG/M
3300005467|Ga0070706_100252211All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1647Open in IMG/M
3300005467|Ga0070706_101094744All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300005468|Ga0070707_100645084All Organisms → cellular organisms → Bacteria1021Open in IMG/M
3300005468|Ga0070707_100888593All Organisms → cellular organisms → Bacteria855Open in IMG/M
3300005471|Ga0070698_100210661All Organisms → cellular organisms → Bacteria1878Open in IMG/M
3300005471|Ga0070698_100271248All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1628Open in IMG/M
3300005471|Ga0070698_101434190All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300005518|Ga0070699_101234980All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300005536|Ga0070697_100959494All Organisms → cellular organisms → Bacteria759Open in IMG/M
3300005536|Ga0070697_101205834All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi674Open in IMG/M
3300005559|Ga0066700_10660625All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium722Open in IMG/M
3300005577|Ga0068857_100006049All Organisms → cellular organisms → Bacteria10337Open in IMG/M
3300005615|Ga0070702_101714704All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300005844|Ga0068862_100983813All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi833Open in IMG/M
3300006049|Ga0075417_10039032All Organisms → cellular organisms → Bacteria2006Open in IMG/M
3300006796|Ga0066665_10069248All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2500Open in IMG/M
3300006796|Ga0066665_10242004All Organisms → cellular organisms → Bacteria1423Open in IMG/M
3300006844|Ga0075428_101576950All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300006852|Ga0075433_10415489All Organisms → cellular organisms → Bacteria1186Open in IMG/M
3300006854|Ga0075425_100680964All Organisms → cellular organisms → Bacteria1181Open in IMG/M
3300006876|Ga0079217_10031536All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1983Open in IMG/M
3300006876|Ga0079217_10117806All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1227Open in IMG/M
3300006876|Ga0079217_10118621All Organisms → cellular organisms → Bacteria1224Open in IMG/M
3300006903|Ga0075426_10308360All Organisms → cellular organisms → Bacteria1158Open in IMG/M
3300006969|Ga0075419_10052401All Organisms → cellular organisms → Bacteria2567Open in IMG/M
3300006969|Ga0075419_10082192All Organisms → cellular organisms → Bacteria2052Open in IMG/M
3300007004|Ga0079218_11721262All Organisms → cellular organisms → Bacteria696Open in IMG/M
3300009012|Ga0066710_100076273All Organisms → cellular organisms → Bacteria4337Open in IMG/M
3300009012|Ga0066710_100082004All Organisms → cellular organisms → Bacteria4211Open in IMG/M
3300009012|Ga0066710_100390021All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2072Open in IMG/M
3300009012|Ga0066710_100403918All Organisms → cellular organisms → Bacteria2037Open in IMG/M
3300009036|Ga0105244_10481703Not Available571Open in IMG/M
3300009089|Ga0099828_11762144All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300009089|Ga0099828_11843460All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium531Open in IMG/M
3300009090|Ga0099827_10913301All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium761Open in IMG/M
3300009137|Ga0066709_100329377All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2088Open in IMG/M
3300009147|Ga0114129_10326760All Organisms → cellular organisms → Bacteria2038Open in IMG/M
3300009147|Ga0114129_11282380All Organisms → cellular organisms → Bacteria909Open in IMG/M
3300009147|Ga0114129_12282930All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium650Open in IMG/M
3300009176|Ga0105242_11940524All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300009176|Ga0105242_12199846All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300010304|Ga0134088_10058091All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1784Open in IMG/M
3300010323|Ga0134086_10204004All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium739Open in IMG/M
3300010329|Ga0134111_10029586All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1904Open in IMG/M
3300010336|Ga0134071_10034869All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2219Open in IMG/M
3300010336|Ga0134071_10433386All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300010375|Ga0105239_11867687All Organisms → cellular organisms → Bacteria696Open in IMG/M
3300010399|Ga0134127_10135131All Organisms → cellular organisms → Bacteria2216Open in IMG/M
3300010400|Ga0134122_11319245All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi730Open in IMG/M
3300010401|Ga0134121_11171324All Organisms → cellular organisms → Bacteria766Open in IMG/M
3300010403|Ga0134123_10354135All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1327Open in IMG/M
3300010403|Ga0134123_10717749All Organisms → cellular organisms → Bacteria980Open in IMG/M
3300012096|Ga0137389_10199267All Organisms → cellular organisms → Bacteria1666Open in IMG/M
3300012203|Ga0137399_10053097All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2956Open in IMG/M
3300012204|Ga0137374_10749996All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi728Open in IMG/M
3300012210|Ga0137378_11053380All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium728Open in IMG/M
3300012225|Ga0137434_1085688All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300012353|Ga0137367_10658599All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi730Open in IMG/M
3300012355|Ga0137369_10025764All Organisms → cellular organisms → Bacteria5469Open in IMG/M
3300012355|Ga0137369_10059312All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi3296Open in IMG/M
3300012356|Ga0137371_10713787All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium766Open in IMG/M
3300012359|Ga0137385_10404383All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1164Open in IMG/M
3300012359|Ga0137385_10475723All Organisms → cellular organisms → Bacteria1059Open in IMG/M
3300012360|Ga0137375_10621800All Organisms → cellular organisms → Bacteria895Open in IMG/M
3300012532|Ga0137373_10112507All Organisms → cellular organisms → Bacteria2357Open in IMG/M
3300012532|Ga0137373_10292155All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1299Open in IMG/M
3300012685|Ga0137397_10310429All Organisms → cellular organisms → Bacteria1175Open in IMG/M
3300012922|Ga0137394_10127313All Organisms → cellular organisms → Bacteria2158Open in IMG/M
3300012922|Ga0137394_11195272All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300013308|Ga0157375_11947073All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300014745|Ga0157377_10293510All Organisms → cellular organisms → Bacteria1070Open in IMG/M
3300015371|Ga0132258_12850785All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1203Open in IMG/M
3300018000|Ga0184604_10112345All Organisms → cellular organisms → Bacteria858Open in IMG/M
3300018000|Ga0184604_10196731All Organisms → cellular organisms → Bacteria689Open in IMG/M
3300018000|Ga0184604_10263927All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300018027|Ga0184605_10339003All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300018028|Ga0184608_10013663All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2822Open in IMG/M
3300018028|Ga0184608_10518476All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300018031|Ga0184634_10496155All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300018056|Ga0184623_10010248All Organisms → cellular organisms → Bacteria4037Open in IMG/M
3300018056|Ga0184623_10255622All Organisms → cellular organisms → Bacteria799Open in IMG/M
3300018075|Ga0184632_10301500All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300018482|Ga0066669_12394674All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300019869|Ga0193705_1095732All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300021363|Ga0193699_10168382All Organisms → cellular organisms → Bacteria905Open in IMG/M
3300021363|Ga0193699_10220795All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi788Open in IMG/M
3300022534|Ga0224452_1250445All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300022694|Ga0222623_10075514All Organisms → cellular organisms → Bacteria1306Open in IMG/M
3300025885|Ga0207653_10002733All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi5613Open in IMG/M
3300025908|Ga0207643_10223650All Organisms → cellular organisms → Bacteria1153Open in IMG/M
3300025910|Ga0207684_10394230All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1190Open in IMG/M
3300025912|Ga0207707_10084037All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2780Open in IMG/M
3300025912|Ga0207707_10936016All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300025917|Ga0207660_10021485All Organisms → cellular organisms → Bacteria4339Open in IMG/M
3300025935|Ga0207709_11062752All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi664Open in IMG/M
3300026023|Ga0207677_11505229All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300026075|Ga0207708_10103467All Organisms → cellular organisms → Bacteria2206Open in IMG/M
3300026075|Ga0207708_10863752All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia782Open in IMG/M
3300026089|Ga0207648_11535183All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300026116|Ga0207674_10195090All Organisms → cellular organisms → Bacteria1975Open in IMG/M
3300026118|Ga0207675_100359373All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1428Open in IMG/M
3300026323|Ga0209472_1060194All Organisms → cellular organisms → Bacteria1596Open in IMG/M
3300026323|Ga0209472_1091817All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1221Open in IMG/M
3300026324|Ga0209470_1021050All Organisms → cellular organisms → Bacteria3516Open in IMG/M
3300026324|Ga0209470_1047217All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2096Open in IMG/M
3300027395|Ga0209996_1021328All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi912Open in IMG/M
3300027873|Ga0209814_10013463All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes3251Open in IMG/M
3300027873|Ga0209814_10112583All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1159Open in IMG/M
3300027880|Ga0209481_10043699All Organisms → cellular organisms → Bacteria2060Open in IMG/M
3300028380|Ga0268265_10965929All Organisms → cellular organisms → Bacteria840Open in IMG/M
3300028799|Ga0307284_10357952All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300028814|Ga0307302_10242767All Organisms → cellular organisms → Bacteria882Open in IMG/M
3300028814|Ga0307302_10350654All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi728Open in IMG/M
3300028819|Ga0307296_10068701All Organisms → cellular organisms → Bacteria1881Open in IMG/M
3300028824|Ga0307310_10064086All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1563Open in IMG/M
3300028828|Ga0307312_10350004All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi966Open in IMG/M
3300028878|Ga0307278_10146650All Organisms → cellular organisms → Bacteria1057Open in IMG/M
3300031965|Ga0326597_10700927All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1065Open in IMG/M
3300032075|Ga0310890_11522200All Organisms → cellular organisms → Bacteria552Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere17.48%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil13.29%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil11.19%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere9.09%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.69%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment6.99%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.20%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.50%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.50%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere3.50%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.10%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.10%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.40%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.40%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.40%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.40%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.70%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.70%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.70%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.70%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.70%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009036Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaGHost-AssociatedOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012225Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT860_2EnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019869Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2EnvironmentalOpen in IMG/M
3300021363Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2EnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300027395Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiDRAFT_071651813300000033SoilELRANSGTQFNPVVVEAFIXTVVGERRKXARGAESPHQQVYQQAVEAVRVSL*
JGI10216J12902_10889062143300000956SoilAMSAKAALRELRANSGTQFNPVVVEAFIKTVVGERRKTARGAESPHQQVYQQAVEAVRVSL*
JGI10216J12902_10896523413300000956SoilVVEAFIKTVVGERRKSARGAESPHEQVYQQAVEAVRVSL*
Ga0066674_1016930113300005166SoilNPVVVEAFIKTVVGERRKSARGAESPHEQVYQQAVEAVRVSL*
Ga0066674_1041876123300005166SoilNPVVVEAFIKTVVGERRKSARGAESPHEQVYQQAVEAVRVAL*
Ga0066688_1050260113300005178SoilRELRANSGTQFNPVVVEAFIKTVVGERRKSARGAESPHEQVYQQAVEAVRITL*
Ga0066678_1051447623300005181SoilLSAKAALRELRANSGTQFNPVVVEAFIKTVVGERRKSARGAESPHEQVYQQAVEAVRVAL
Ga0070680_10018895113300005336Corn RhizosphereSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVQAVRSTF*
Ga0070680_10024159713300005336Corn RhizosphereSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRVSL*
Ga0070689_10139619423300005340Switchgrass RhizospherePVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRSTF*
Ga0070687_10049662613300005343Switchgrass RhizosphereNSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRSTI*
Ga0070692_1005315013300005345Corn, Switchgrass And Miscanthus RhizospherePALSAKQALRELRANSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVQAVRSTF*
Ga0070692_1061947513300005345Corn, Switchgrass And Miscanthus RhizospherePALSAKQALRELRANSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRVQL*
Ga0070692_1069795543300005345Corn, Switchgrass And Miscanthus RhizospherePVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRVSL*
Ga0070673_10100010923300005364Switchgrass RhizosphereAKQALRELRANSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRSTF*
Ga0070703_1001805533300005406Corn, Switchgrass And Miscanthus RhizospherePVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVQAVRSTF*
Ga0070694_10009584133300005444Corn, Switchgrass And Miscanthus RhizosphereAKQALRELRANSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVQAVRSTF*
Ga0070694_10027306843300005444Corn, Switchgrass And Miscanthus RhizosphereTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRVSL*
Ga0070694_10028562113300005444Corn, Switchgrass And Miscanthus RhizosphereTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRSTF*
Ga0070694_10029454843300005444Corn, Switchgrass And Miscanthus RhizosphereSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRVQL*
Ga0070708_10223052823300005445Corn, Switchgrass And Miscanthus RhizosphereANSGTQFNPVVVEAFIKTVVGERRKSARGADSPHQQVYQQAVQAVRSTF*
Ga0066686_1005545063300005446SoilFNPVVVEAFIKTVVGERRKSARGAQSPHEQVYQQAVEAVRVSL*
Ga0066686_1103726913300005446SoilFNPVVVEAFIKTVVGERRKSARGAQSPHEQVYQQAVEAVRLTL*
Ga0070706_10001947313300005467Corn, Switchgrass And Miscanthus RhizosphereQFNPVVVEAFIKTVVGERRKSARGAESPHEQVYQQAVEAVRVSL*
Ga0070706_10025221113300005467Corn, Switchgrass And Miscanthus RhizosphereTQFNPVVVEAFIKTVVGERRKSARGAESPHEQVYQQAVEAVRVSL*
Ga0070706_10109474423300005467Corn, Switchgrass And Miscanthus RhizosphereFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRSTF*
Ga0070707_10064508433300005468Corn, Switchgrass And Miscanthus RhizosphereRKAALRELRANSGTQFNPVVVEAFVRAVIGERRKARRTGTSDELVLQQALATVRVTV*
Ga0070707_10088859323300005468Corn, Switchgrass And Miscanthus RhizosphereNSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVQAVRSTF*
Ga0070698_10021066123300005471Corn, Switchgrass And Miscanthus RhizosphereTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVQAVRSTF*
Ga0070698_10027124813300005471Corn, Switchgrass And Miscanthus RhizosphereVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRVSL*
Ga0070698_10143419023300005471Corn, Switchgrass And Miscanthus RhizosphereSAKQALRELRANSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVQAVRSTF*
Ga0070699_10123498013300005518Corn, Switchgrass And Miscanthus RhizosphereNSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRVSL*
Ga0070697_10095949413300005536Corn, Switchgrass And Miscanthus RhizosphereNSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRSTF*
Ga0070697_10120583443300005536Corn, Switchgrass And Miscanthus RhizosphereVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRVQL*
Ga0066700_1066062513300005559SoilKAALRELRANSGTQFNPVVVEAFIKTVVGERRKSARGAESPHEQVYQQAVEAVRVSL*
Ga0068857_100006049133300005577Corn RhizosphereFIKTVVGERRKSARGAESPHQQVYQQAVEAVRVSL*
Ga0070702_10171470433300005615Corn, Switchgrass And Miscanthus RhizosphereANSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRVSL*
Ga0068862_10098381313300005844Switchgrass RhizosphereNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRVSL*
Ga0075417_1003903233300006049Populus RhizosphereTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRLTL*
Ga0066665_1006924853300006796SoilFNPVVVEAFIKTVVGERRKSARGAESPHEQVYQQAVEAVRVSL*
Ga0066665_1024200413300006796SoilFNPVVVEAFIKTVVGERRKSARGAESPHEQVYQQAVEAVRVAL*
Ga0075428_10157695023300006844Populus RhizosphereNPVVVEAFIKTVVGERHKSARGVASPHEQVYQQALEAVRVTL*
Ga0075433_1041548923300006852Populus RhizosphereTQFNPVVVEAFIKTVVGERRKSARGAESPHEQVYQQAVEAVRITL*
Ga0075425_10068096413300006854Populus RhizosphereTQFNPVVVEAFIKTVVGERRKSARGAESPHEQVYQQAVEAVRVTL*
Ga0079217_1003153663300006876Agricultural SoilGTQFNPLVVEAFIKTVVGERRKTARGAESPHQQVYQQAVEAVRVSL*
Ga0079217_1011780613300006876Agricultural SoilQFNPLVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRVSL*
Ga0079217_1011862113300006876Agricultural SoilGTQFNPLVVEAFIKTVVGERRKTARGAESPHQQVYQQAVEAVRLTF*
Ga0075426_1030836013300006903Populus RhizosphereFIKTVVGERRKSARGAESPHEQVYQQAVEAVRVTL*
Ga0075419_1005240113300006969Populus RhizosphereGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRVSL*
Ga0075419_1008219213300006969Populus RhizosphereGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRLTL*
Ga0079218_1172126243300007004Agricultural SoilAKAALRELRANSGTQFNPLVVEAFIKTVVGERRKTARGAESPHQQVYQQAVEAVRVSL*
Ga0066710_10007627393300009012Grasslands SoilALRELRANSGTQFNPVVVEAFIKTVVGERRKSARGAESPHEQVYQQAVEAVRVSL
Ga0066710_10008200493300009012Grasslands SoilFNPVVVEAFIKTVVGERRKSARGAPSPHEQVYQQAVEAVRVSL
Ga0066710_10039002133300009012Grasslands SoilVEAFIKTVVGERRKSARGAQSPHEQVYQQAVEAVRLTF
Ga0066710_10040391833300009012Grasslands SoilFNPVVVEAFIKTVVGERRKSARGAPSPHEQVYQQAVEAVRVAL
Ga0105244_1048170323300009036Miscanthus RhizosphereKQALRELRANSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRSTF*
Ga0099828_1176214413300009089Vadose Zone SoilSGTQFNPVVVEAFIKTVVGERRKSARGAQSPHEQVYQQAVEAVRISL*
Ga0099828_1184346013300009089Vadose Zone SoilSGTQFNPVVVEAFIKTVVGERRKSARGAQSPHEQVYQQAVEAVRVSL*
Ga0099827_1091330143300009090Vadose Zone SoilAHSGTQFNPVVVEAFIKTVVGERRKSARGAESPHEQVYQQAVEAVRVSL*
Ga0066709_10032937713300009137Grasslands SoilQFNPVVVEAFIKTVVGERRKSARGAQSPHEQVYQQAVEAVRLTL*
Ga0114129_1032676013300009147Populus RhizosphereGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRSTL*
Ga0114129_1128238013300009147Populus RhizosphereGTQFNPVVVEAFIKTVVGERRKSARGAESPHEQVYQQAVEAVRITL*
Ga0114129_1228293043300009147Populus RhizosphereGTQFNPVVVEAFIKTVVGERRKSARGAESPHEQVYQQAVEAVRVSL*
Ga0105242_1194052423300009176Miscanthus RhizosphereFIKTVVGERRKSARGAESPHQQVYQQAVQAVRSTF*
Ga0105242_1219984613300009176Miscanthus RhizosphereAALRELRANSGTQFNPLVVEAFIKTVVGERRKAARGAESPHQQVYQQAVEAVRVSL*
Ga0134088_1005809113300010304Grasslands SoilFIKTVVGERRKSARGAQSPHEQVYQQAVEAVRVSL*
Ga0134086_1020400443300010323Grasslands SoilEAFIKTVVGERRKSARGAQSPHEQVYQQAVEAVRVSL*
Ga0134111_1002958623300010329Grasslands SoilRANSGTQFNPVVVEAFIKTVVGERRKSARGAESPHEQVYQQAVEAVRVAL*
Ga0134071_1003486913300010336Grasslands SoilQFNPVVVEAFIKTVVGERRKSARGAQSPHEQVYQQAVEAVRVSL*
Ga0134071_1043338613300010336Grasslands SoilPVVVEAFIKTVVGERRKSARGAQSPHEQVYQQAVEAVRLTL*
Ga0105239_1186768723300010375Corn RhizosphereALRELRANSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVQAVRSTF*
Ga0134127_1013513133300010399Terrestrial SoilALSAKQALRELRANSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVQAVRSTF*
Ga0134122_1131924513300010400Terrestrial SoilVVAEALNKTVVGERRKSARGAESPHQQVYQQAVEAVRVSL*
Ga0134121_1117132413300010401Terrestrial SoilLSAKQALRELRANSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVQAVRSTF
Ga0134123_1035413543300010403Terrestrial SoilELRANSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRVSL*
Ga0134123_1071774923300010403Terrestrial SoilANSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVQAVRSTF*
Ga0137389_1019926713300012096Vadose Zone SoilGTQFNPVVVEAFIKTVVGERRKSARGAESPHEQVYQQAVEAVRVTL*
Ga0137399_1005309773300012203Vadose Zone SoilALRELRANSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRVSL*
Ga0137374_1074999643300012204Vadose Zone SoilFIKTVVGERRKSARGAESPHEQVYQQAVEAVRVSL*
Ga0137378_1105338043300012210Vadose Zone SoilVVVEAFIKTVVGERRKSARGAQSPHEQVYQQAVEAVRVSL*
Ga0137434_108568813300012225SoilELRANSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRLTF*
Ga0137367_1065859913300012353Vadose Zone SoilHSGTQFNPVVVEAFIKTVIGERRKSARGAESPHEHVYQQAVEAVRVSV*
Ga0137369_10025764103300012355Vadose Zone SoilAKQALRELRAHSGTQFNPVVVEAFIKTVIGERRKSARGAESPHEHVYQQAVEAVRVSV*
Ga0137369_1005931283300012355Vadose Zone SoilNPVVVEAFITTVVGERRKSARGAESPHQQVYQQAVQAVRVAL*
Ga0137371_1071378713300012356Vadose Zone SoilVVEAFIKTVVGERRKSARGAQSPHEQVYQQAVEAGRVSL*
Ga0137385_1040438343300012359Vadose Zone SoilANSGTQFNPVVVEAFIKTVVGERRKSARGAQSPHEQVYQQAVEAVRVSL*
Ga0137385_1047572313300012359Vadose Zone SoilANSGTQFNPVVVEAFIKTVVGERRKSARGAQSPHEQVYQQAVEAVRLTL*
Ga0137375_1062180013300012360Vadose Zone SoilPVVVEAFITTVVGERRKSARGAESPHQQVYQQAVQAVRSTF*
Ga0137373_1011250713300012532Vadose Zone SoilHSGTQFNPVVVEAFITTVVGERRKSARGAESPHQQVYQQAVQAVRSTF*
Ga0137373_1029215543300012532Vadose Zone SoilNPVVVEAFIKTVIGERRKSARGAASPHEHVYQQAVEAVRVSV*
Ga0137397_1031042923300012685Vadose Zone SoilNPLVVEAFIKTVVGERRKSARGAESPHQQVYEQAVQAVRSTF*
Ga0137394_1012731333300012922Vadose Zone SoilGTQFNPLVVEAFIKTVVGERRKSARGAESPHQQVYEQAVQAVRSTF*
Ga0137394_1119527213300012922Vadose Zone SoilGTQFNPLVVEAFIKTVVGERRKSARGAESPHQQVYEQAVQAVRVQL*
Ga0157375_1194707313300013308Miscanthus RhizosphereQALRELRANSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRSTF*
Ga0157377_1029351023300014745Miscanthus RhizosphereIKTVVGERRKSARGAESPHQQVYQQAVEAVRSTI*
Ga0132258_1285078513300015371Arabidopsis RhizosphereSGTQFNPVVVEAFIKTVVGERRKTARGVQSPHQQVYQQAVEAVRVSL*
Ga0184604_1011234513300018000Groundwater SedimentGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRSTF
Ga0184604_1019673113300018000Groundwater SedimentGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRVSL
Ga0184604_1026392713300018000Groundwater SedimentNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRSTF
Ga0184605_1033900323300018027Groundwater SedimentPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRSTF
Ga0184608_1001366313300018028Groundwater SedimentNSGTQFNPVVVEAFITTVVGERRKSARGAESPHQQVYQQAVEAVRVQL
Ga0184608_1051847613300018028Groundwater SedimentNSGTQFNPVVVEAFITTVVGERRKSARGAESPHQQVYQQAVQAVRSTF
Ga0184634_1049615533300018031Groundwater SedimentVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRVSL
Ga0184623_1001024883300018056Groundwater SedimentGTQFNPLVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRVSL
Ga0184623_1025562223300018056Groundwater SedimentGTQFNPLVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRITL
Ga0184632_1030150013300018075Groundwater SedimentFNRVLVAAFMKTVVGERRKSARGAETPHQQVYQQAVEAVRSTF
Ga0066669_1239467423300018482Grasslands SoilSAKAALRELRANSGTQFNPVVVEAFIKTVVGERRKSARGAESPHEQVYQQAVEAVRVAL
Ga0193705_109573223300019869SoilSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRSTF
Ga0193699_1016838213300021363SoilPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRITL
Ga0193699_1022079543300021363SoilVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRVSL
Ga0224452_125044513300022534Groundwater SedimentRELRANSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRSTF
Ga0222623_1007551423300022694Groundwater SedimentPVVVEAFITTVVGERRKSARGAESPHQQVYQQAVQAVRSTF
Ga0207653_1000273313300025885Corn, Switchgrass And Miscanthus RhizosphereVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRVQL
Ga0207643_1022365013300025908Miscanthus RhizosphereVEAFIKTVVGERRKTARGAESPHQQVYQQAVEAVRITF
Ga0207684_1039423013300025910Corn, Switchgrass And Miscanthus RhizosphereVEAFIKTVVGERRKSARGAESPHEQVYQQAVEAVRVSL
Ga0207707_1008403713300025912Corn RhizosphereKQALRELRANSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRVSL
Ga0207707_1093601623300025912Corn RhizosphereANSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVQAVRSTF
Ga0207660_1002148563300025917Corn RhizosphereNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVQAVRSTF
Ga0207709_1106275213300025935Miscanthus RhizosphereAFIKTVAGERRKSARGAESPHQQVYQQAVEAVRVSL
Ga0207677_1150522933300026023Miscanthus RhizosphereRELRANSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRVSL
Ga0207708_1010346763300026075Corn, Switchgrass And Miscanthus RhizosphereYRPALSAKQALRELRANSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRVSL
Ga0207708_1086375223300026075Corn, Switchgrass And Miscanthus RhizosphereYRPALSAKQALRELRANSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVQAVRSTF
Ga0207648_1153518313300026089Miscanthus RhizosphereQALRELRANSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVQAVRSTF
Ga0207674_1019509033300026116Corn RhizosphereAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRSTF
Ga0207675_10035937343300026118Switchgrass RhizospherePVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRVSL
Ga0209472_106019413300026323SoilQFNPVVVEAFIKTVVGERRKSARGAESPHEQVYQQAVEAVRVAL
Ga0209472_109181743300026323SoilQFNPVVVEAFIKTVVGERRKSARGAESPHEQVYQQAVEAVRVSL
Ga0209470_102105013300026324SoilTQFNPVVVEAFIKTVVGERRKSARGAQSPHEQVYQQAVEAVRVSL
Ga0209470_104721733300026324SoilTQFNPVVVEAFIKTVVGERRKSARGAQSPHEQVYQQAVEAVRLTL
Ga0209996_102132843300027395Arabidopsis Thaliana RhizosphereQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRVSL
Ga0209814_1001346333300027873Populus RhizosphereVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRLTL
Ga0209814_1011258343300027873Populus RhizosphereVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRVSL
Ga0209481_1004369913300027880Populus RhizosphereSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRLTL
Ga0268265_1096592913300028380Switchgrass RhizosphereSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVQAVRSTF
Ga0307284_1035795213300028799SoilVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRSTL
Ga0307302_1024276713300028814SoilAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRLTF
Ga0307302_1035065443300028814SoilVEAFIKTVFGERRKSARGAESPHQQVYQQAVEAVRVSL
Ga0307296_1006870133300028819SoilFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRSTF
Ga0307310_1006408613300028824SoilRANSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRVSL
Ga0307312_1035000443300028828SoilSGTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRVSL
Ga0307278_1014665023300028878SoilTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRSTF
Ga0326597_1070092713300031965SoilPVVVEAFIKTVVGERRKSARGAESPHEQVYQQAVEAVRVSL
Ga0310890_1152220023300032075SoilLRANSSTQFNPVVVEAFIKTVVGERRKSARGAESPHQQVYQQAVEAVRSTF

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.