Metagenome / Metatranscriptome Family F051817

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051817
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	40 residues
Representative Sequence	KFETADLITGEVEFSPLVGERPSKHGTFKAVRAGGG
Number of Associated Samples	120
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	11.89 %
% of genes near scaffold ends (potentially truncated)	88.11 %
% of genes from short scaffolds (< 2000 bps)	93.01 %
Associated GOLD sequencing projects	116
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.203 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (21.678 % of family members)
Environment Ontology (ENVO)	Unclassified (34.266 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.755 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 29.69% Coil/Unstructured: 70.31%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF01797	Y1_Tnp	8.39
PF13414	TPR_11	3.50
PF13366	PDDEXK_3	3.50
PF14559	TPR_19	3.50
PF13231	PMT_2	2.10
PF13620	CarboxypepD_reg	1.40
PF00672	HAMP	0.70
PF00486	Trans_reg_C	0.70
PF02012	BNR	0.70
PF07884	VKOR	0.70
PF00285	Citrate_synt	0.70
PF13432	TPR_16	0.70
PF13735	tRNA_NucTran2_2	0.70
PF13462	Thioredoxin_4	0.70
PF01471	PG_binding_1	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	8.39
COG0372	Citrate synthase	Energy production and conversion [C]	0.70
COG4243	Vitamin K epoxide reductase (VKOR) family protein, predicted involvement in disulfide bond formation	General function prediction only [R]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.20 %
Unclassified	root	N/A	2.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.20 %
Unclassified	root	N/A	2.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.20 %
Unclassified	root	N/A	2.80 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	39.86 %
Unclassified	root	N/A	2.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	39.86 %
Unclassified	root	N/A	2.80 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	25.17 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	3.50 %
Unclassified	root	N/A	2.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	25.17 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	3.50 %
Unclassified	root	N/A	2.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	25.17 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	3.50 %
Unclassified	root	N/A	2.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	25.17 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	3.50 %
Unclassified	root	N/A	2.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	25.17 %
Unclassified	root	N/A	2.80 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2.10 %
unclassified Candidatus Udaeobacter	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	25.17 %
Unclassified	root	N/A	2.80 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2.10 %
Candidatus Udaeobacter sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig106564	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	540	Open in IMG/M
2170459011\|GI3SL7401E1R5J	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	551	Open in IMG/M
2209111022\|2221217682	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0440479	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100560699	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300000955\|JGI1027J12803_101369925	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	759	Open in IMG/M
3300001990\|JGI24737J22298_10105015	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300002126\|JGI24035J26624_1020645	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300004156\|Ga0062589_100714811	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300004479\|Ga0062595_101389711	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	639	Open in IMG/M
3300005167\|Ga0066672_10360204	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	950	Open in IMG/M
3300005167\|Ga0066672_10979697	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300005175\|Ga0066673_10774131	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300005178\|Ga0066688_10080827	All Organisms → cellular organisms → Bacteria	1950	Open in IMG/M
3300005294\|Ga0065705_10460373	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300005332\|Ga0066388_106695820	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	580	Open in IMG/M
3300005365\|Ga0070688_100976717	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300005466\|Ga0070685_11442060	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300005543\|Ga0070672_100660833	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	913	Open in IMG/M
3300005552\|Ga0066701_10462581	Not Available	788	Open in IMG/M
3300005568\|Ga0066703_10363954	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300005598\|Ga0066706_10137271	All Organisms → cellular organisms → Bacteria	1824	Open in IMG/M
3300005598\|Ga0066706_10391543	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1105	Open in IMG/M
3300006046\|Ga0066652_100834858	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300006796\|Ga0066665_10596979	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300006796\|Ga0066665_11312979	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300006800\|Ga0066660_10293825	All Organisms → cellular organisms → Bacteria	1293	Open in IMG/M
3300006806\|Ga0079220_11487482	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300007255\|Ga0099791_10320821	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300009012\|Ga0066710_100866678	All Organisms → cellular organisms → Bacteria	1388	Open in IMG/M
3300009012\|Ga0066710_101918651	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	885	Open in IMG/M
3300009012\|Ga0066710_103423877	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300009792\|Ga0126374_10259510	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300010048\|Ga0126373_10666356	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300010048\|Ga0126373_12821298	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	542	Open in IMG/M
3300010361\|Ga0126378_11648569	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300010362\|Ga0126377_11879897	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	674	Open in IMG/M
3300010396\|Ga0134126_11769420	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	678	Open in IMG/M
3300010398\|Ga0126383_12016758	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	664	Open in IMG/M
3300011271\|Ga0137393_10315242	Not Available	1333	Open in IMG/M
3300012096\|Ga0137389_10601386	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	945	Open in IMG/M
3300012189\|Ga0137388_11925686	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300012201\|Ga0137365_10243658	All Organisms → cellular organisms → Bacteria	1338	Open in IMG/M
3300012201\|Ga0137365_10441845	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	958	Open in IMG/M
3300012201\|Ga0137365_10759131	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	708	Open in IMG/M
3300012202\|Ga0137363_10935193	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	736	Open in IMG/M
3300012205\|Ga0137362_10045204	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3566	Open in IMG/M
3300012207\|Ga0137381_10906157	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	762	Open in IMG/M
3300012207\|Ga0137381_10987824	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300012207\|Ga0137381_11730719	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300012208\|Ga0137376_11680290	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300012209\|Ga0137379_10057704	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3737	Open in IMG/M
3300012210\|Ga0137378_11717726	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300012285\|Ga0137370_10245690	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1059	Open in IMG/M
3300012285\|Ga0137370_10778073	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	594	Open in IMG/M
3300012350\|Ga0137372_10264849	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1346	Open in IMG/M
3300012355\|Ga0137369_10709053	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300012359\|Ga0137385_10545111	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300012359\|Ga0137385_11248491	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300012360\|Ga0137375_10112350	All Organisms → cellular organisms → Bacteria	2744	Open in IMG/M
3300012582\|Ga0137358_10066303	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2420	Open in IMG/M
3300012685\|Ga0137397_11041447	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300012913\|Ga0157298_10430401	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300012918\|Ga0137396_10781317	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300012929\|Ga0137404_11733820	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300012930\|Ga0137407_10100696	All Organisms → cellular organisms → Bacteria	2476	Open in IMG/M
3300012948\|Ga0126375_11925454	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	520	Open in IMG/M
3300012955\|Ga0164298_11259158	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300012957\|Ga0164303_10533749	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300012960\|Ga0164301_10182204	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1320	Open in IMG/M
3300012972\|Ga0134077_10217226	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	783	Open in IMG/M
3300012977\|Ga0134087_10416853	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300012977\|Ga0134087_10624166	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300012986\|Ga0164304_10267325	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300012988\|Ga0164306_11605710	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300013297\|Ga0157378_12031632	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300013306\|Ga0163162_12263204	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300013308\|Ga0157375_12354786	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300014154\|Ga0134075_10117682	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300014157\|Ga0134078_10313069	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300014166\|Ga0134079_10283756	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300015241\|Ga0137418_10506582	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300015356\|Ga0134073_10126385	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	785	Open in IMG/M
3300015359\|Ga0134085_10070926	All Organisms → cellular organisms → Bacteria	1417	Open in IMG/M
3300015359\|Ga0134085_10554280	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	530	Open in IMG/M
3300015372\|Ga0132256_100569407	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1246	Open in IMG/M
3300015374\|Ga0132255_101702329	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300016387\|Ga0182040_11189925	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300017657\|Ga0134074_1401415	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
3300018066\|Ga0184617_1059536	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300018071\|Ga0184618_10488213	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	517	Open in IMG/M
3300018433\|Ga0066667_10302327	Not Available	1245	Open in IMG/M
3300018482\|Ga0066669_10022345	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3568	Open in IMG/M
3300018482\|Ga0066669_11940915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300019872\|Ga0193754_1009908	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	987	Open in IMG/M
3300019873\|Ga0193700_1069857	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300019881\|Ga0193707_1105153	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300019882\|Ga0193713_1088499	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	868	Open in IMG/M
3300019882\|Ga0193713_1124944	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300019883\|Ga0193725_1060796	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300019886\|Ga0193727_1104345	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	831	Open in IMG/M
3300020022\|Ga0193733_1017311	All Organisms → cellular organisms → Bacteria	2036	Open in IMG/M
3300020199\|Ga0179592_10457261	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300021344\|Ga0193719_10033652	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2214	Open in IMG/M
3300022756\|Ga0222622_10177403	All Organisms → cellular organisms → Bacteria	1397	Open in IMG/M
3300022756\|Ga0222622_10220031	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1271	Open in IMG/M
3300022756\|Ga0222622_10505285	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	864	Open in IMG/M
3300025315\|Ga0207697_10003041	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	8414	Open in IMG/M
3300025315\|Ga0207697_10065514	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1516	Open in IMG/M
3300025625\|Ga0208219_1069620	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300025910\|Ga0207684_11323988	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300025915\|Ga0207693_10233554	All Organisms → cellular organisms → Bacteria	1444	Open in IMG/M
3300025915\|Ga0207693_11213992	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300025918\|Ga0207662_10678122	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300025937\|Ga0207669_10302209	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1217	Open in IMG/M
3300025944\|Ga0207661_10563379	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1044	Open in IMG/M
3300025961\|Ga0207712_10658540	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	911	Open in IMG/M
3300025972\|Ga0207668_11462262	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300026023\|Ga0207677_11052727	Not Available	740	Open in IMG/M
3300026306\|Ga0209468_1015348	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2792	Open in IMG/M
3300026327\|Ga0209266_1231893	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300026329\|Ga0209375_1262571	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300026551\|Ga0209648_10241678	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1344	Open in IMG/M
3300027565\|Ga0209219_1152992	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300027655\|Ga0209388_1163027	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	627	Open in IMG/M
3300027678\|Ga0209011_1150764	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	653	Open in IMG/M
3300027748\|Ga0209689_1243950	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	745	Open in IMG/M
3300027821\|Ga0209811_10071543	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1213	Open in IMG/M
3300028536\|Ga0137415_11180032	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	580	Open in IMG/M
3300028707\|Ga0307291_1103868	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300028711\|Ga0307293_10105956	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300030916\|Ga0075386_12150339	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300031231\|Ga0170824_105551807	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300031231\|Ga0170824_106929903	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300031231\|Ga0170824_122892952	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300031469\|Ga0170819_12410403	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300031474\|Ga0170818_103290387	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300031912\|Ga0306921_11790053	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	661	Open in IMG/M
3300031962\|Ga0307479_11576648	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300032174\|Ga0307470_11372051	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	582	Open in IMG/M
3300032179\|Ga0310889_10078247	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1362	Open in IMG/M
3300032205\|Ga0307472_100868528	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	832	Open in IMG/M
3300032205\|Ga0307472_102385167	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.51%
Host-Associated	Host-Associated	9.79%
Engineered	Engineered	0.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.01%
Plants	Host-Associated → Plants	9.79%
Aquatic	Environmental → Aquatic	3.50%
Modeled	Engineered → Modeled	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.01%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.90%
Sediment	Environmental → Aquatic → Sediment	3.50%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.32%
Loam	Environmental → Terrestrial → Soil → Loam	7.69%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.70%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	48.25%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.18%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.10%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.70%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.70%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.70%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.80%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.10%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.10%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.10%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.10%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.40%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.70%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.70%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.70%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.70%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.70%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.70%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.70%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2170459011	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect Gram positive lysis 0-10cm	Environmental	Open in IMG/M
2209111022	Grass soil microbial communities from Rothamsted Park, UK - Chitin enrichment	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300002126	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Host-Associated	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019872	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a1	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025625	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0563.00006250	2166559005	Simulated	FEMPDAITGEVEFAPLVGERPSKHGTFKAVRNNSAH
F64_02307340	2170459011	Grass Soil	LVFKGKFEAAGLITGGVEFASLAGERPSKHGTFKGTRE
2222063131	2209111022	Grass Soil	DAGTLVFQGKFETADSITGEVEFSPLVGDMPSKQGTFKAMRASGG
ICChiseqgaiiDRAFT_04404791	3300000033	Soil	LMFKGKFETPDSIGGEVEFAPLVGERPSKHGTFKATRNNSAR*
INPhiseqgaiiFebDRAFT_1005606991	3300000364	Soil	GTLVFKGKFKTPDLISGEVELSPLVGERPSKHGTFKAIRASG*
JGI1027J12803_1013699252	3300000955	Soil	LTLKGKFDTPDSIAGEVDFSPLAGDGPSKHGTFKAVREKE*
JGI24737J22298_101050151	3300001990	Corn Rhizosphere	GKFDTPDLIAGEVDFSPLVGDGPSKQGTFKAVREKE*
JGI24035J26624_10206452	3300002126	Corn, Switchgrass And Miscanthus Rhizosphere	LTFNGKFDTPDLIAGEVDFSPLVGDGPSKQGTFKAVREKE*
Ga0062589_1007148111	3300004156	Soil	TLAFNGKFETPDLITGEVGFSPLVGDGPSKHGTFKAVREKK*
Ga0062595_1013897111	3300004479	Soil	GTLTLKGKFDTPDLITGEVEFSPLVGDGPSKHGTFKAVRVGGGD*
Ga0066672_103602042	3300005167	Soil	MLLFKGKFEGADLITGEEDFSPLVGDRPSKHGTFKATRDNSFH*
Ga0066672_109796972	3300005167	Soil	AGTLTFKGKFEGADLINGEVDFSPLVGDRPTRHGTFKATRDNSAH*
Ga0066673_107741313	3300005175	Soil	ATLVFKGKFETPDLITGEVEFSPLVGERHSKHGTFKAARGGGGE*
Ga0066688_100808274	3300005178	Soil	AGTLTCKGKFETPDLITGEVEFSPSVGEGPSKHGTFKAVRAKE*
Ga0065705_104603732	3300005294	Switchgrass Rhizosphere	AGTLTLKGKFDTPDSITGEVEFSPLVGDGPSKHGTFKAVRASQ*
Ga0066388_1066958201	3300005332	Tropical Forest Soil	LTCKGKFETSDSIAGEVDFSPLAGDGPSKHGTFKAIREKE*
Ga0070688_1009767172	3300005365	Switchgrass Rhizosphere	LTCTGKFETADLITGEADFSPLVGERPSKLGSFKASRAAK*
Ga0070685_114420602	3300005466	Switchgrass Rhizosphere	GKFETADLITGEVEFSRLVGDRPSKSGAFKAIRASGEGK*
Ga0070672_1006608332	3300005543	Miscanthus Rhizosphere	TFKGKFDTPDLIAGEVDFSPLVGDGPSKQGTFKAVREK*
Ga0066701_104625811	3300005552	Soil	GKFETPDSITGEVEFAPLVGERPSKHGTFKASRTQ*
Ga0066703_103639541	3300005568	Soil	LMFNGKFETADLITGEVEFSPLVGERPSKHGTFKAVRAGGVGQ*
Ga0066706_101372713	3300005598	Soil	FETADLITGEVEFSPLVGERPSKHGTFKAVRAGGG*
Ga0066706_103915431	3300005598	Soil	EAADLITGEVEFSPLVGERPSKHGTFKATRAGGG*
Ga0066652_1008348581	3300006046	Soil	GRFETADLISGEVEFSPSVGERPSRHGTFKAVRAVK*
Ga0066665_105969791	3300006796	Soil	KFETADLITGEVEFSPLVGERPSKHGTFKAVRAGGG*
Ga0066665_113129791	3300006796	Soil	VCKGKLETPDLITGEVEFSPLVGERPSKHGTFKATRAGGG*
Ga0066660_102938252	3300006800	Soil	TCKGKFETADLISGEVEFSPSVGDRPSRHGTFKAVRAVK*
Ga0079220_114874821	3300006806	Agricultural Soil	GKLTLKGKFDTPDLITGEADFSPLAGDGPSKHGTFKAVREKE*
Ga0099791_103208211	3300007255	Vadose Zone Soil	GKFETPDAITGEVEFAPLVGERPSKHGSFKATRAQR*
Ga0066710_1008666781	3300009012	Grasslands Soil	KFESADLISGEVEFSPSVGDRPSKHGTFKAVRSGT
Ga0066710_1019186511	3300009012	Grasslands Soil	KGKFESADLISGEVEFSPSVGERPSKHGTFKAGRQGT
Ga0066710_1034238772	3300009012	Grasslands Soil	GKFETADLISGEVEFSPSVGERPSRHGTFKAVRAVK
Ga0126374_102595102	3300009792	Tropical Forest Soil	GTLTCKGKFETPDSITGEVDFFPLVGERPTRHGTFKAVRGKG*
Ga0126373_106663561	3300010048	Tropical Forest Soil	GKFEGADLISGEVEFSPSVGDRQSKHGTFKAVRGGT*
Ga0126373_128212981	3300010048	Tropical Forest Soil	FETADLITGEVEFSPSVGERPSKHGTFKAVRGAK*
Ga0126378_116485692	3300010361	Tropical Forest Soil	GKFETPDLITGEVEFSPSVGERPSKHGTFKAVREKQ*
Ga0126377_118798972	3300010362	Tropical Forest Soil	FKGKFETADSITGEVEFSPLVGERASKLGTFKAVRDAK*
Ga0134126_117694201	3300010396	Terrestrial Soil	PGTLMFKGKFETPDSISGEVEFAPLVGERPSKHGTFKAVRSKD*
Ga0126383_120167581	3300010398	Tropical Forest Soil	GTLAFKGKFETADSITGEVEFSPSVGERPSKHGTFKAVRGVK*
Ga0137393_103152421	3300011271	Vadose Zone Soil	TLVFKGKFETADLITGEVEFSPLLGERPSKHGTFKAVRTQ*
Ga0137389_106013861	3300012096	Vadose Zone Soil	AGTLMCKGKFETPDVITGEVDFSPSVGDGPSKHGKFKAVRA*
Ga0137388_119256861	3300012189	Vadose Zone Soil	GKFETADLITGEVEFSPLIGERPSKHGTFKAVRAGGG*
Ga0137365_102436583	3300012201	Vadose Zone Soil	FKGKFEKADLITGEVEFSPLVGERPSKHGTFKAARAGGG*
Ga0137365_104418451	3300012201	Vadose Zone Soil	DAGTLIFNGRFETADLIKGEVEFSPLVGDRPSKHGTFKAARAGGG*
Ga0137365_107591312	3300012201	Vadose Zone Soil	DAGTLTCKGKFETPELITGEVDFSPSVGEGPSKHGKFKAVRA*
Ga0137363_109351933	3300012202	Vadose Zone Soil	GTLTFKGKFEGADLINGEVDFSPLVGDRPTRHGTFKATRDNSAH*
Ga0137362_100452042	3300012205	Vadose Zone Soil	GTLVFTGKFETANLITGEVEFSPLVGERPSKHGTFKAVRAGGG*
Ga0137381_109061571	3300012207	Vadose Zone Soil	KFEKADLITGEVEFSPLVGDRPSKHGSFKAVRAQ*
Ga0137381_109878241	3300012207	Vadose Zone Soil	LVCKGKFETPDLITGEAEFSPLVGERPSKHGTFKAIRAKE*
Ga0137381_117307192	3300012207	Vadose Zone Soil	GKFETESLITGEVEFSPLVGDRPSKSGTFKAIRAAGG*
Ga0137376_116802901	3300012208	Vadose Zone Soil	TLLFKGKLETAALITGEVEFSPLVGERPSKHGTFKAVRAAGG*
Ga0137379_100577041	3300012209	Vadose Zone Soil	AGTLMCKGKFETPDLITGEVDFSPSVGEGPSKHGKFKAVRA*
Ga0137378_117177261	3300012210	Vadose Zone Soil	GKFETADLISGEVEFSPSVGERPSRHGTFKAVRAVK*
Ga0137370_102456902	3300012285	Vadose Zone Soil	MFNGKFETSDLITGEVEFSPRVGERPSKHGTFKATRAGGG*
Ga0137370_107780731	3300012285	Vadose Zone Soil	TLTCKGKFETADLITGEADFSPLVGERPSKLGTFKAVRGAK*
Ga0137372_102648491	3300012350	Vadose Zone Soil	NGRFETADLIKGEVEFSPLVGDRPSKHGTFKAARAGGG*
Ga0137369_107090532	3300012355	Vadose Zone Soil	VCKGKFDTANLITGEVEFSPLVGKQPSKHGTFKAVRE*
Ga0137385_105451112	3300012359	Vadose Zone Soil	AGTLLFNGKFETSDLITGEVEFSPLVGERPSKHGTFKAVRAGG*
Ga0137385_112484911	3300012359	Vadose Zone Soil	VCKGKFETPDLITGEAEFSPLVGERPSKHGTFKAVRNKD*
Ga0137375_101123503	3300012360	Vadose Zone Soil	GTLVFKGKFETADLITGEVEFSPLVGDQPSKHGTFKAVRG*
Ga0137358_100663033	3300012582	Vadose Zone Soil	ETESLITGEVEFSPLVGDGPSKSGTFKAIRAAGG*
Ga0137397_110414471	3300012685	Vadose Zone Soil	GKFETADSITGEAEFSPLVGDMPSKHGAFKSMRASGG*
Ga0157298_104304012	3300012913	Soil	LKGTFETEDLITGETEFSALGADRPSKKGTFKAVREK*
Ga0137396_107813171	3300012918	Vadose Zone Soil	FQGKFETADSITGEVEFSPLVGDMPSKHGAFKSMRASGG*
Ga0137404_117338201	3300012929	Vadose Zone Soil	VFQGKFETADSITGEVEFSPLVGDMPSKHGAFKSMRASGG*
Ga0137407_101006962	3300012930	Vadose Zone Soil	MLICKGKFESADLITGDVEFAPLVGDRPTKHGTFKATRNHE*
Ga0126375_119254541	3300012948	Tropical Forest Soil	GTLAFKGKFETADSITGEVEFSPSVGERPSKHGTFKAVRGAK*
Ga0164298_112591582	3300012955	Soil	VFQGKFETADSITGEVEFSPLIGDMPSKHGTFKSMRASGG*
Ga0164303_105337492	3300012957	Soil	VFQGKFETADSITGEVEFSPLVGDMRSKYGTFKSMRARGGEH*
Ga0164301_101822042	3300012960	Soil	FETPDSITGEVDFSPLVGDGPSKHGTFKAVREKK*
Ga0134077_102172261	3300012972	Grasslands Soil	QFETPDLITGEVEFSPSVGERPSKHGTFKAIRAKE*
Ga0134087_104168531	3300012977	Grasslands Soil	AGTLVFNGKFETSDLIRGEVEFSPLVGERPSKHGTFKAVRAH*
Ga0134087_106241661	3300012977	Grasslands Soil	GKFEGADLINGEVDFSPLVGDRPSKHGTFKATRDISAH*
Ga0164304_102673251	3300012986	Soil	VFQGKFETADSITGEVEFSPFVGDMPSKHGTFKSMRARGGEH*
Ga0164306_116057102	3300012988	Soil	KGKFETPDSITGEVDFSPLVGDGPTKHGTFKAVREKK*
Ga0157378_120316321	3300013297	Miscanthus Rhizosphere	LETETTMTGEVDFSPAIGEQPSKHGTFKAVRGHGE*
Ga0163162_122632042	3300013306	Switchgrass Rhizosphere	LTFNGKFETPDLITGEVDFSPLVGDGPSKHGTFKAVREKK*
Ga0157375_123547863	3300013308	Miscanthus Rhizosphere	FNGKFETPDTISGQVEFAPLVGERPSKHGTFKAVRGKD*
Ga0134075_101176822	3300014154	Grasslands Soil	TFKGKFETPDLITGEVEFSPSVGERPSKHGTFKAIRAKE*
Ga0134078_103130691	3300014157	Grasslands Soil	ETPDLITGEVEFSPLVGERPSKHGTFKAARGGGGE*
Ga0134079_102837561	3300014166	Grasslands Soil	GKFEKADLITGEVEFSPLVGERPSKHGTFKAVRAGGG*
Ga0137418_105065823	3300015241	Vadose Zone Soil	FESPDLITGEVEFSPLVGDRPSKHGTFKAIRASG*
Ga0134073_101263852	3300015356	Grasslands Soil	CKGKFETPDLITGEAEFSPLVGERPSKHGTFKAVRAKE*
Ga0134085_100709261	3300015359	Grasslands Soil	DAGTLTFNGKFETSDLITGEVEFSPLVGERPSKHGTFKAVRAGG*
Ga0134085_105542802	3300015359	Grasslands Soil	VFKGKFETASLITGQVEFSPLLGDASSKTGTFKAIRAAGG*
Ga0132256_1005694072	3300015372	Arabidopsis Rhizosphere	VFQGKFETADSITGEVEFSPLVGDMPSKHGTFKSMRASGG*
Ga0132255_1017023292	3300015374	Arabidopsis Rhizosphere	GKFDSPDLIVGEVDFSPLVGDGPSKQGTFKAVREKE*
Ga0182040_111899253	3300016387	Soil	GTLVFNGKFETSDLITGEVEFSPLVGERPSKHGTFKAVRASG
Ga0134074_14014152	3300017657	Grasslands Soil	LMFNGRFETADLIKGEVEFSPLVGDRPSKHGTFKAARAGGG
Ga0184617_10595361	3300018066	Groundwater Sediment	TLTLKGKFDTPDLITGEVDFSPLVGDGPSKHGTFKAVREKE
Ga0184618_104882131	3300018071	Groundwater Sediment	TLVFKGKFENPSLITGEVEFAPLVGERPSKHGTFKAVPAGDG
Ga0066667_103023271	3300018433	Grasslands Soil	MLLFKGKFEGADLITGEEDFSPLVGDRPSKHGTFKATRDNSFH
Ga0066669_100223451	3300018482	Grasslands Soil	TLVFKGKFETDGSIKGEVEFSPIVGDQPSKHGTFKAVRAGGG
Ga0066669_119409151	3300018482	Grasslands Soil	GTLACKGKFETPDLITGEAEFSPLVGERPSKHGTFKAVRAKE
Ga0193754_10099081	3300019872	Soil	TCKGKFETADLISGEVEFSPSVGDRPSKHGTFKAVRSGT
Ga0193700_10698572	3300019873	Soil	FETADLITGEVEFSPLVGERPSKHGTFKAVRVSGGAQ
Ga0193707_11051532	3300019881	Soil	VFQGKFETADSITGEVEFSPLVGDMPSKHGTFKSMRASGGQDQQRV
Ga0193713_10884991	3300019882	Soil	LTCKGKFETPDLITGEVEFSPSVGEGPSKHGTFKAIRAKE
Ga0193713_11249442	3300019882	Soil	VFQGKFETADSITGEVEFSPLVGDIPSKHGTFKSMRASGG
Ga0193725_10607962	3300019883	Soil	VFQGKFETADSITGEVEFSPLVCDMPSKHGTFKSMRASGGQDQQRV
Ga0193727_11043451	3300019886	Soil	TLMFTGKFETPDSISGEVEFAPLVGDRPSKHGTFKATRNNSAR
Ga0193733_10173113	3300020022	Soil	GTVVFKGKFETESSITGEVEFSPLVGDGPSKSGTFKAIRAAGG
Ga0179592_104572611	3300020199	Vadose Zone Soil	VFQGKFETADSITGEVEFSPLVGDMPSKHGAFKSMRASGG
Ga0193719_100336521	3300021344	Soil	KFETESLITGEVDFSPLVGDGPSKSGTFKAIRAAGG
Ga0222622_101774031	3300022756	Groundwater Sediment	GKFDNPDLITGEADFSPLVGDGPSKHGTFKAVREKE
Ga0222622_102200311	3300022756	Groundwater Sediment	GTLMFKGKFETESLITGQVEFSPLVGGSPSKTGTFKAIRAAGG
Ga0222622_105052853	3300022756	Groundwater Sediment	GKFETADLITGEVEFSPSVGDRPSKHGTFKAVRSGT
Ga0207697_100030411	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	CQGKFETPDSITGEADFSPLVGDGPSKHGTFKAVREKK
Ga0207697_100655141	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	FDTPDLITGEVDFSPLVGDGPSKHGTFKAVRAGGG
Ga0208219_10696201	3300025625	Arctic Peat Soil	VFKGKFETETSMAGQVDFTPRIGDQPPKHGTFKAVRSGGG
Ga0207684_113239882	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	AGTVTFKGKFEGANLITGDVEFAPLVGERPSKHGTFKAVRNRD
Ga0207693_102335542	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LTLKGKFTSPDLIAGEVDFSPLVGDGPSKQGTFKAVREKK
Ga0207693_112139922	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	TFKGKLETETTITGGVDFSPLLGEQPTKHGTFKAVRDSGG
Ga0207662_106781221	3300025918	Switchgrass Rhizosphere	LTFNGKFDTPDLIAGEVDFSPLVGDGPSKQGTFKAVREKE
Ga0207669_103022091	3300025937	Miscanthus Rhizosphere	TLNGKFETPDLINGEVDFSPLVGDGPSKHGTFKAVREKK
Ga0207661_105633791	3300025944	Corn Rhizosphere	TCTGKFETADLITGEADFSPLVGERPSKLGSFKASRAAK
Ga0207712_106585401	3300025961	Switchgrass Rhizosphere	TLKGKFDTPDLITGEVDFSPLVGDGPSKHGTFKAVRASGE
Ga0207668_114622622	3300025972	Switchgrass Rhizosphere	GTLTFNGKFDTPDLIAGEVDFSPLVGDGPSKQGTFKAVREKE
Ga0207677_110527272	3300026023	Miscanthus Rhizosphere	FETENLITGEVVFSPLVGDGPSKSGTFRATRGAGGDGD
Ga0209468_10153481	3300026306	Soil	KFETDGSIKGEVEFSPIVGDQPSKHGTFKAVRAGGG
Ga0209266_12318931	3300026327	Soil	LVFKGRFEKADLITGEVEFSPLVGERPLKHGTFKAVRAH
Ga0209375_12625711	3300026329	Soil	EAGTLMCKGKFETPDLITGEVDFSPSVGEGPSKHGTFKAIRAKE
Ga0209648_102416782	3300026551	Grasslands Soil	MLTCKGKFETPELITGEVDFSPLLGERPSKLGTFKAVRETK
Ga0209219_11529922	3300027565	Forest Soil	FKGKFETESLIAGEVEFSPLVGDRPSKSGTFKAIRVAG
Ga0209388_11630273	3300027655	Vadose Zone Soil	GKFETPDVITGEVEFAPLVGDRPTRHGTFKATRTQ
Ga0209011_11507641	3300027678	Forest Soil	FKGKFETESLITGEVEFSPLVGDRPSKSGTFKAVPAGDG
Ga0209689_12439503	3300027748	Soil	SFCSKGKIETPYTISGEVEFAPLVGERPSKHGTFKATRNHG
Ga0209811_100715431	3300027821	Surface Soil	GTVTLKGKFDAPDLITGEVDFSPLVGDGPSKHGTFKAVRASGG
Ga0137415_111800321	3300028536	Vadose Zone Soil	FKGKFDTSDLSTGEVEFSPLVGDGPSKHGTFKAVRAE
Ga0307291_11038682	3300028707	Soil	FNGKFETPELITGEVDFSPLVGDGPSKHGTFKAVREKK
Ga0307293_101059563	3300028711	Soil	NGRFETADLITGEVEFSPLVGERPSKHGTFKAVRVSGGAQ
Ga0075386_121503392	3300030916	Soil	LKTADSITGEVEFSPLVGDMPSKHGTFKAMRASGG
Ga0170824_1055518072	3300031231	Forest Soil	GTLVFKGKFEAASLITGEVEFASLAGERPSKHGTFKATRE
Ga0170824_1069299031	3300031231	Forest Soil	VFQSKFETADSITGEEEFSLLVDDMPSKHGTFKAMRASGG
Ga0170824_1228929522	3300031231	Forest Soil	VFQGKFETADSITGEVEFSLLVGDMPSKQGTFKAMRASGR
Ga0170819_124104032	3300031469	Forest Soil	VFRGKFETADSITGEVEFSPLVGDMPSKQGTFKAMRASGG
Ga0170818_1032903871	3300031474	Forest Soil	VFQGKFEMADSITGEVEFSPLVGDMPSKHGTFKAMRASGG
Ga0306921_117900531	3300031912	Soil	LMCKGKFETPDLITGEVEFSPLVGDRPSKQGTFKATRAKGS
Ga0307479_115766482	3300031962	Hardwood Forest Soil	GTLMCKGKFETPDVITGQAEFSPLVGERPSKLGTFKATRAKGN
Ga0307470_113720511	3300032174	Hardwood Forest Soil	LTCRGKFETADLITGEAEFSPLVGDGPSKHGTFKAVRASGG
Ga0310889_100782472	3300032179	Soil	GTLTLKGKFETPDLITGEVDFSPLVGDGPSKHGTFKAVRAGGG
Ga0307472_1008685282	3300032205	Hardwood Forest Soil	LKGKFDTPDLITGEVDFSPLVGDGPSKQGTFKATRVSG
Ga0307472_1023851672	3300032205	Hardwood Forest Soil	AGTLTFDGKFETPDLLTGEVEFSPLVGERPSKHGTFKAVRAGGGEH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051817

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences