Metagenome / Metatranscriptome Family F051812

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051812
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	65 residues
Representative Sequence	MKKKLTAEEWWNDIVEYERTHEIAFASPRALLEARMIAEMDKARRPHRRAQRNGTARRRKAVAG
Number of Associated Samples	114
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	53.15 %
% of genes near scaffold ends (potentially truncated)	18.88 %
% of genes from short scaffolds (< 2000 bps)	78.32 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.007 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (23.077 % of family members)
Environment Ontology (ENVO)	Unclassified (26.573 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (33.566 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.96% β-sheet: 0.00% Coil/Unstructured: 63.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF00027	cNMP_binding	4.90
PF01964	ThiC_Rad_SAM	3.50
PF07732	Cu-oxidase_3	2.10
PF07394	DUF1501	2.10
PF04383	KilA-N	1.40
PF08241	Methyltransf_11	1.40
PF01909	NTP_transf_2	0.70
PF00924	MS_channel	0.70
PF08448	PAS_4	0.70
PF00004	AAA	0.70
PF04945	YHS	0.70
PF14280	DUF4365	0.70
PF04074	DUF386	0.70
PF00202	Aminotran_3	0.70
PF11172	DUF2959	0.70
PF02464	CinA	0.70
PF01797	Y1_Tnp	0.70
PF08335	GlnD_UR_UTase	0.70
PF12833	HTH_18	0.70
PF01039	Carboxyl_trans	0.70
PF01609	DDE_Tnp_1	0.70
PF05168	HEPN	0.70
PF00152	tRNA-synt_2	0.70
PF01927	Mut7-C	0.70
PF06439	3keto-disac_hyd	0.70
PF01636	APH	0.70
PF02348	CTP_transf_3	0.70
PF04542	Sigma70_r2	0.70
PF13020	NOV_C	0.70
PF05717	TnpB_IS66	0.70
PF04055	Radical_SAM	0.70
PF05016	ParE_toxin	0.70
PF10415	FumaraseC_C	0.70
PF00206	Lyase_1	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG0422	4-amino-2-methyl-5-hydroxymethylpyrimidine (HMP) synthase ThiC	Coenzyme transport and metabolism [H]	3.50
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	2.10
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.70
COG2250	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	0.70
COG2269	Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)	Translation, ribosomal structure and biogenesis [J]	0.70
COG2731	Beta-galactosidase, beta subunit	Carbohydrate transport and metabolism [G]	0.70
COG2844	UTP:GlnB (protein PII) uridylyltransferase	Signal transduction mechanisms [T]	0.70
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.70
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.70
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.70
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.70
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.70
COG4799	Acetyl-CoA carboxylase, carboxyltransferase component	Lipid transport and metabolism [I]	0.70
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.70
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.70
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.70
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.70
COG0017	Aspartyl/asparaginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.70
COG1895	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	0.70
COG1861	Spore coat polysaccharide biosynthesis protein SpsF, cytidylyltransferase family	Cell wall/membrane/envelope biogenesis [M]	0.70
COG1656	Uncharacterized conserved protein, contains PIN-related Mut7-C RNAse domain	General function prediction only [R]	0.70
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.70
COG1546	Nicotinamide mononucleotide (NMN) deamidase PncC	Coenzyme transport and metabolism [H]	0.70
COG1212	CMP-2-keto-3-deoxyoctulosonic acid synthetase	Cell wall/membrane/envelope biogenesis [M]	0.70
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.70
COG1190	Lysyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	0.70
COG1083	CMP-N-acetylneuraminic acid synthetase, NeuA/PseF family	Cell wall/membrane/envelope biogenesis [M]	0.70
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	0.70
COG0777	Acetyl-CoA carboxylase beta subunit	Lipid transport and metabolism [I]	0.70
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.70
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.70
COG0173	Aspartyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.71 %
Unclassified	root	N/A	6.29 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.71 %
Unclassified	root	N/A	6.29 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.01 %
Unclassified	root	N/A	6.29 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.70 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	74.13 %
Unclassified	root	N/A	6.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.10 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.70 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	73.43 %
Unclassified	root	N/A	6.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.10 %
Candidatus Pacearchaeota	clade	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota	0.70 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	64.34 %
Unclassified	root	N/A	6.29 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	2.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.10 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.70 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.70 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	64.34 %
Unclassified	root	N/A	6.29 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	2.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.10 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	0.70 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.70 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	64.34 %
Unclassified	root	N/A	6.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.10 %
unclassified Verrucomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales	0.70 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.70 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.70 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	64.34 %
Unclassified	root	N/A	6.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.10 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	0.70 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.70 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000574\|JGI1357J11328_10074023	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1175	Open in IMG/M
3300003310\|D1draft_1000198	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	111826	Open in IMG/M
3300003319\|soilL2_10295738	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1265	Open in IMG/M
3300003465\|P52013CM_1002782	All Organisms → cellular organisms → Bacteria	89466	Open in IMG/M
3300004114\|Ga0062593_100100657	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2036	Open in IMG/M
3300005167\|Ga0066672_10011233	All Organisms → cellular organisms → Bacteria	4332	Open in IMG/M
3300005176\|Ga0066679_10365030	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	945	Open in IMG/M
3300005179\|Ga0066684_10059451	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2224	Open in IMG/M
3300005181\|Ga0066678_10944814	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300005340\|Ga0070689_100060518	Not Available	2944	Open in IMG/M
3300005446\|Ga0066686_10820666	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	617	Open in IMG/M
3300005447\|Ga0066689_10553949	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	727	Open in IMG/M
3300005451\|Ga0066681_10956549	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
3300005468\|Ga0070707_100756095	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300005528\|Ga0068872_10290484	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300005540\|Ga0066697_10563459	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	637	Open in IMG/M
3300005566\|Ga0066693_10170528	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	827	Open in IMG/M
3300005575\|Ga0066702_10256914	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1065	Open in IMG/M
3300005587\|Ga0066654_10816164	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300005598\|Ga0066706_10663078	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	828	Open in IMG/M
3300006031\|Ga0066651_10509437	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	637	Open in IMG/M
3300006796\|Ga0066665_11083722	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300006797\|Ga0066659_11154822	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	647	Open in IMG/M
3300006800\|Ga0066660_10915900	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	713	Open in IMG/M
3300006893\|Ga0073928_10009092	All Organisms → cellular organisms → Bacteria	12205	Open in IMG/M
3300006893\|Ga0073928_10029346	All Organisms → cellular organisms → Bacteria → Proteobacteria	5334	Open in IMG/M
3300007521\|Ga0105044_10053496	All Organisms → cellular organisms → Bacteria	4920	Open in IMG/M
3300009012\|Ga0066710_100304548	All Organisms → cellular organisms → Bacteria	2336	Open in IMG/M
3300009012\|Ga0066710_100947357	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1327	Open in IMG/M
3300009012\|Ga0066710_100991548	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1296	Open in IMG/M
3300009012\|Ga0066710_101079787	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1241	Open in IMG/M
3300009012\|Ga0066710_101192807	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1179	Open in IMG/M
3300009012\|Ga0066710_102159081	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	815	Open in IMG/M
3300009012\|Ga0066710_102377853	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	769	Open in IMG/M
3300009012\|Ga0066710_103292355	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	617	Open in IMG/M
3300009012\|Ga0066710_103296477	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	617	Open in IMG/M
3300009078\|Ga0105106_10820865	Not Available	662	Open in IMG/M
3300009083\|Ga0105047_10399391	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1363	Open in IMG/M
3300009084\|Ga0105046_10375353	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1454	Open in IMG/M
3300009089\|Ga0099828_11044684	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300009090\|Ga0099827_11318413	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	628	Open in IMG/M
3300009100\|Ga0075418_11948475	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	640	Open in IMG/M
3300009137\|Ga0066709_100886389	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1299	Open in IMG/M
3300009137\|Ga0066709_101424958	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1005	Open in IMG/M
3300009137\|Ga0066709_101431598	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1002	Open in IMG/M
3300009137\|Ga0066709_103549134	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	566	Open in IMG/M
3300009147\|Ga0114129_12216023	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	661	Open in IMG/M
3300009239\|Ga0103858_10110138	Not Available	693	Open in IMG/M
3300009257\|Ga0103869_10041328	Not Available	1014	Open in IMG/M
3300009261\|Ga0103870_1017112	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	836	Open in IMG/M
3300009524\|Ga0116225_1363344	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	644	Open in IMG/M
3300009873\|Ga0131077_10073485	All Organisms → cellular organisms → Bacteria → Proteobacteria	4407	Open in IMG/M
3300010321\|Ga0134067_10012157	All Organisms → cellular organisms → Bacteria	2472	Open in IMG/M
3300010329\|Ga0134111_10186421	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	834	Open in IMG/M
3300010333\|Ga0134080_10627040	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
3300010379\|Ga0136449_102703541	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	704	Open in IMG/M
3300010391\|Ga0136847_10934091	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1321	Open in IMG/M
3300010391\|Ga0136847_12321570	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	899	Open in IMG/M
3300010391\|Ga0136847_13449677	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5791	Open in IMG/M
3300012096\|Ga0137389_10650720	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	906	Open in IMG/M
3300012096\|Ga0137389_11375428	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	601	Open in IMG/M
3300012198\|Ga0137364_10165895	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1605	Open in IMG/M
3300012198\|Ga0137364_10275884	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1245	Open in IMG/M
3300012202\|Ga0137363_10159989	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1776	Open in IMG/M
3300012202\|Ga0137363_11742521	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300012203\|Ga0137399_11139049	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300012205\|Ga0137362_11072664	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	685	Open in IMG/M
3300012205\|Ga0137362_11165262	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	654	Open in IMG/M
3300012206\|Ga0137380_10759142	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	839	Open in IMG/M
3300012210\|Ga0137378_10783293	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	866	Open in IMG/M
3300012210\|Ga0137378_11726187	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300012211\|Ga0137377_10848038	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	846	Open in IMG/M
3300012212\|Ga0150985_116315328	Not Available	647	Open in IMG/M
3300012349\|Ga0137387_11103319	Not Available	565	Open in IMG/M
3300012351\|Ga0137386_11066391	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300012354\|Ga0137366_11052545	Not Available	563	Open in IMG/M
3300012354\|Ga0137366_11125845	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	538	Open in IMG/M
3300012356\|Ga0137371_10570247	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	871	Open in IMG/M
3300012357\|Ga0137384_10557522	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	938	Open in IMG/M
3300012360\|Ga0137375_10225374	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1752	Open in IMG/M
3300012361\|Ga0137360_10834565	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	794	Open in IMG/M
3300012361\|Ga0137360_11706901	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	535	Open in IMG/M
3300012361\|Ga0137360_11732308	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300012362\|Ga0137361_10775051	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	874	Open in IMG/M
3300012363\|Ga0137390_11325479	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	665	Open in IMG/M
3300012532\|Ga0137373_10271978	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1358	Open in IMG/M
3300012923\|Ga0137359_10281182	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1483	Open in IMG/M
3300012927\|Ga0137416_11681185	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	579	Open in IMG/M
3300012927\|Ga0137416_11775185	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	563	Open in IMG/M
3300012944\|Ga0137410_10689929	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	850	Open in IMG/M
3300012976\|Ga0134076_10209504	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	820	Open in IMG/M
(restricted) 3300013131\|Ga0172373_10105234	All Organisms → cellular organisms → Bacteria	2119	Open in IMG/M
3300014152\|Ga0181533_1240968	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	678	Open in IMG/M
3300014157\|Ga0134078_10085994	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1153	Open in IMG/M
3300014200\|Ga0181526_10400582	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	871	Open in IMG/M
3300014208\|Ga0172379_10424153	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	856	Open in IMG/M
3300014492\|Ga0182013_10071125	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	2492	Open in IMG/M
3300014495\|Ga0182015_10590587	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	705	Open in IMG/M
3300014501\|Ga0182024_11047417	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	968	Open in IMG/M
3300015360\|Ga0163144_10024182	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	11928	Open in IMG/M
3300017788\|Ga0169931_10187602	All Organisms → cellular organisms → Bacteria	1785	Open in IMG/M
3300017931\|Ga0187877_1295160	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	620	Open in IMG/M
3300017988\|Ga0181520_10125307	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2138	Open in IMG/M
3300018056\|Ga0184623_10341465	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300018071\|Ga0184618_10269671	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	722	Open in IMG/M
3300018422\|Ga0190265_10243157	All Organisms → cellular organisms → Bacteria	1842	Open in IMG/M
3300018482\|Ga0066669_10405151	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1156	Open in IMG/M
3300019487\|Ga0187893_10588914	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	707	Open in IMG/M
3300019890\|Ga0193728_1103333	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1314	Open in IMG/M
3300020074\|Ga0194113_10016619	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	8344	Open in IMG/M
3300020074\|Ga0194113_10866245	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	613	Open in IMG/M
3300020193\|Ga0194131_10021315	All Organisms → cellular organisms → Bacteria	6195	Open in IMG/M
3300020193\|Ga0194131_10044290	All Organisms → cellular organisms → Bacteria	3173	Open in IMG/M
3300020193\|Ga0194131_10047232	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2996	Open in IMG/M
3300020193\|Ga0194131_10230819	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300020195\|Ga0163150_10219767	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	996	Open in IMG/M
3300020213\|Ga0163152_10019314	All Organisms → cellular organisms → Bacteria	6085	Open in IMG/M
3300020214\|Ga0194132_10529067	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	577	Open in IMG/M
3300020220\|Ga0194119_10352799	All Organisms → cellular organisms → Bacteria → Proteobacteria	968	Open in IMG/M
3300020603\|Ga0194126_10198541	All Organisms → cellular organisms → Bacteria	1441	Open in IMG/M
3300021470\|Ga0194051_1088137	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1095	Open in IMG/M
3300021473\|Ga0194043_1001856	All Organisms → cellular organisms → Bacteria	11791	Open in IMG/M
3300022557\|Ga0212123_10355916	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	999	Open in IMG/M
3300025936\|Ga0207670_10033089	Not Available	3329	Open in IMG/M
3300026317\|Ga0209154_1020155	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3132	Open in IMG/M
3300026547\|Ga0209156_10133560	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1210	Open in IMG/M
3300026552\|Ga0209577_10075370	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2785	Open in IMG/M
3300027815\|Ga0209726_10050708	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2889	Open in IMG/M
3300027878\|Ga0209181_10166977	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	2028	Open in IMG/M
3300028536\|Ga0137415_10774806	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	770	Open in IMG/M
3300028804\|Ga0268298_10253127	All Organisms → cellular organisms → Bacteria → PVC group	932	Open in IMG/M
3300031057\|Ga0170834_106858699	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	691	Open in IMG/M
3300031525\|Ga0302326_10203878	All Organisms → cellular organisms → Bacteria	3297	Open in IMG/M
3300031963\|Ga0315901_10287337	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1370	Open in IMG/M
3300032157\|Ga0315912_10490243	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	977	Open in IMG/M
3300032157\|Ga0315912_11495498	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300032160\|Ga0311301_10021061	All Organisms → cellular organisms → Bacteria	18325	Open in IMG/M
3300032160\|Ga0311301_11774783	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	737	Open in IMG/M
3300032397\|Ga0315287_11261914	Not Available	847	Open in IMG/M
3300032420\|Ga0335397_10301390	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1422	Open in IMG/M
3300032897\|Ga0335071_11198886	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	704	Open in IMG/M
3300033158\|Ga0335077_11910877	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	554	Open in IMG/M
3300033402\|Ga0326728_10001708	All Organisms → cellular organisms → Bacteria	76361	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.80%
Host-Associated	Host-Associated	2.10%
Engineered	Engineered	2.10%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.73%
Aquatic	Environmental → Aquatic	30.07%
Plants	Host-Associated → Plants	2.10%
Wastewater	Engineered → Wastewater	1.40%
Bioreactor	Engineered → Bioreactor	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.64%
Freshwater	Environmental → Aquatic → Freshwater	26.57%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.10%
Sediment	Environmental → Aquatic → Sediment	1.40%
Peat	Environmental → Terrestrial → Peat	1.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.40%
Activated Sludge	Engineered → Wastewater → Activated Sludge	1.40%
Cave	Environmental → Terrestrial → Cave	0.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.70%
Unclassified	Engineered → Bioreactor → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.04%
Lake	Environmental → Aquatic → Freshwater → Lake	13.99%
Ice	Environmental → Aquatic → Freshwater → Ice	3.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.50%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.80%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	2.80%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.10%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.10%
Loam	Environmental → Terrestrial → Soil → Loam	2.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.40%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.40%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	1.40%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.70%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.70%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.70%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	23.08%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	11.19%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	3.50%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.80%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	2.80%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.10%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.10%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	1.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.40%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.40%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.40%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.40%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	1.40%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.70%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.70%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.70%
Mine Drainage	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage	0.70%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.70%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.29%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.79%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	6.29%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	3.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.80%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.80%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	2.10%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	2.10%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.10%
River Water	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water	2.10%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.10%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.40%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	1.40%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	1.40%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.40%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.40%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.40%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.40%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.70%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.70%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.70%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.70%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.70%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.70%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.70%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil	0.70%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.70%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.70%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.70%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.70%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.70%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.70%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.70%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	0.70%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.70%
Down-Flow Hanging Sponge Reactor	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Down-Flow Hanging Sponge Reactor	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000574	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m	Environmental	Open in IMG/M
3300003310	Down-flow hanging sponge reactor microbial communities from the University of Illinois at Urbana-Champaign, USA - L1-648F-DHS	Engineered	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003465	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P5 sample	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007521	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009083	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (megahit assembly)	Environmental	Open in IMG/M
3300009084	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-03 (megahit assembly)	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009239	Microbial communities of water from Amazon river, Brazil - RCM11	Environmental	Open in IMG/M
3300009257	Microbial communities of water from Amazon river, Brazil - RCM22	Environmental	Open in IMG/M
3300009261	Microbial communities of water from Amazon river, Brazil - RCM23	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009873	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant	Engineered	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013131 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10m	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014208	Groundwater microbial communities from an aquifer near a municipal landfill in Southern Ontario, Canada - Groundwater well OW334 metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015360	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1	Environmental	Open in IMG/M
3300017788	Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20L	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020074	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m	Environmental	Open in IMG/M
3300020193	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015053 Kigoma Offshore 120m	Environmental	Open in IMG/M
3300020195	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.P2.IB	Environmental	Open in IMG/M
3300020213	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP8.IB-2	Environmental	Open in IMG/M
3300020214	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015054 Kigoma Offshore 80m	Environmental	Open in IMG/M
3300020220	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015018 Mahale Deep Cast 100m	Environmental	Open in IMG/M
3300020603	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015035 Kigoma Deep Cast 150m	Environmental	Open in IMG/M
3300021470	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L239-20m	Environmental	Open in IMG/M
3300021473	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L442-15m	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027878	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-05 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028804	Activated sludge microbial communities from WWTP in Nijmegen, Gelderland, Netherland - WWTP Weurt	Engineered	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032420	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (spades assembly)	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1357J11328_100740232	3300000574	Groundwater	MKTKRRRDWLDEVFEYERTHVIAFASPRALLEARMIAEMDKARRPRRRALRNGATHPRKAVAA*
D1draft_10001984	3300003310	Down-Flow Hanging Sponge Reactor	MKTKLTAAEKWWNECVEYERTHEIAFASPRALLEARMIEAMDKARRPHRRNHRNGVVRRRKAVAG*
soilL2_102957382	3300003319	Sugarcane Root And Bulk Soil	LPCHRPGGNLTDMKTKLTAAEKWWKECADYEATHEIAFASPRALLEARMIATVDKARRSRRPAHRNGVARRRKALVG*
P52013CM_100278253	3300003465	Ore Pile And Mine Drainage Contaminated Soil	MLDMKTKRKRDWLDECFEYEATHEIAFASPRALLEARMIAEMDKARRPRRGHTRRNGVARRRKVSAR*
Ga0062593_1001006573	3300004114	Soil	MKAPRKRDWLDECFEYEATHPIAFASPRALLEARMIEAIDKARRPQRRAHRNGVALSRKAAVAG*
Ga0066672_100112337	3300005167	Soil	VKAVAQKKLTDEEWLRDIFEYERTHPIAFASPRALLEARMIAEMDKARRPRRRARRNGAVRPRKVAAR*
Ga0066679_103650302	3300005176	Soil	MKKKLTAEEWWNDIVEYERTHEIAFASPRALLEARMIAEMDKARRPRRRARRNGAVRPRKVAAR*
Ga0066684_100594512	3300005179	Soil	MKKKLTAEEWWNDIVEYERTHEIAFASPRALLEARMIAEIDKARRPRRRARRNGAVRPRKVAAR*
Ga0066678_109448142	3300005181	Soil	MKKKLTADKWWNDIVEYERTHEIAFASPRALLEARMIAEMDKARRPHRRAQRNGAARRRKPVAG*
Ga0070689_1000605183	3300005340	Switchgrass Rhizosphere	MKPKLTAAEKWWKDCADYEETHGIAFASPRALLEARMIEAMDKARRPRRAKRKAAAFRKLASA*
Ga0066686_108206661	3300005446	Soil	MTDEEWLRDIFEYERTHEIAFASPRALLEARMIAELDKARRPLRRAHRNSAVRRRKVATA
Ga0066689_105539492	3300005447	Soil	MKKKLTAEEWWNDIVEYERTHEIAFASPRPLLEARMIAEMDKARRPHRRDRRDGVSHRRKAVAR*
Ga0066681_109565492	3300005451	Soil	MKKKLTAEEWWNDIVEYERTHEIAFASSRALLEARMIAEIDKARRPRRRARRNGAVRPRKVAAR*
Ga0070707_1007560951	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MDDLLEYERTHEIAFASPRALLEARMIEAMDKARRPQRRAHRNGVALRRKTVAG*
Ga0068872_102904842	3300005528	Freshwater Lake	MKTKLTPTEWMDDILEYERTHEIAFASPRALLEARIIEAMDKARRPRRAKRKAAAPRKLASA*
Ga0066697_105634591	3300005540	Soil	KRDMKKKLTAEEWWNDIVEYERTHEIAFASPRALLEARMIAEIDKARRPRRRARRNGAVRPPKVAAR*
Ga0066693_101705281	3300005566	Soil	KRGRKSKFPNVKAVAQKKLTDEEWLRDIFEYERTHPIAFASPRALLEARMIAEMDKARRPRRRARRNGAVRPPKVAAR*
Ga0066702_102569141	3300005575	Soil	WWNDIVEYERTHEIAFASPRALLEARMIAEMDKARRPRRRARRNGAVRPRKVAAR*
Ga0066654_108161641	3300005587	Soil	DMKKKLTAEEWWNDIVEYERTHEIAFASPRALLEARMIAEIDKARRPRRRARRNGAVRPRKVAAR*
Ga0066706_106630781	3300005598	Soil	ESAALQIPHCGLILPKMKRKLTPREWMDDLLEYERTHEIAFASPRALLEAHMIAAMDKARRPRHRAHRNGVARRRKTVTR*
Ga0066651_105094372	3300006031	Soil	VKAVAQKKLTDEEWLRDIFEYERTHPIAFASPRALLEARMIAEMDKARRPRRRARRNGAVRPPKVA
Ga0066665_110837221	3300006796	Soil	MEYKRTHEIAFASPRELLEAHTIAAMEKARRFPRRTRKNGAALRSKVAAHRISGSV
Ga0066659_111548222	3300006797	Soil	MKKKLTAEEWWNDIVEYERTHEIAFASPRALLEARMIAEMDKARRPHRRDRRNGVSHRRKAVAR*
Ga0066660_109159002	3300006800	Soil	MNAVTQKQLTDEEWLRDIFEYERTHEIAFASPRALMEARMIAEMDKARRPRRRAHRNGASSSRRRQAVVG*
Ga0073928_1000909211	3300006893	Iron-Sulfur Acid Spring	VKAKRRRDWLDDLFEYERTHEIAFAAPRALLEARMIAEMDKARRPRRRNHRNGLSHRPKAVAS*
Ga0073928_100293466	3300006893	Iron-Sulfur Acid Spring	MKRKLTPQEWMDDILEYERTHEIAFASPRALLEARMIAEMDKARRPRRRAHRNGVSHRRKAVAG*
Ga0105044_100534963	3300007521	Freshwater	VNKANFSLVKTPAQKKLTDEEWLRECFEYERTHEIAFASPKALLEARMIAAMDKARRPRRRAGRNGVAPRPKAAAR*
Ga0066710_1003045482	3300009012	Grasslands Soil	LPKRGRKRKLLDVKEVAQKKLTDEEWLRDIFEYERTHEIAFASPRALLEARMIAEMDKARRPRRRNHQNGVAHRRKAVAD
Ga0066710_1009473572	3300009012	Grasslands Soil	MTDEEWLRDIFEYERTHEIAFASPRALLEARMIAELDKARRPHRRAHRNSAVRRRKVATA
Ga0066710_1009915482	3300009012	Grasslands Soil	MKTKRKRDWLDECFEYERTHPMVFASPRALLEARMIAEMDRARRPRRRAHRNGVAHRRKVAAG
Ga0066710_1010797873	3300009012	Grasslands Soil	MKKKRTAEEWWNDIVEYERTHEIAFASPRALLEARMIAEMDKARRPHRRAQRNGAPRRRKPVTG
Ga0066710_1011928074	3300009012	Grasslands Soil	MKKKLTAEEWWNDIVEYERTHEIAFAAPRALLEARMIAEMDKARRPRRRNHQNAVAHRRKAVAG
Ga0066710_1021590811	3300009012	Grasslands Soil	VKGRRKRDWLDALFDYEARHPIAFASPRALVEARLIAEMDKARRSRRRGRNGAANRSKAEAR
Ga0066710_1023778532	3300009012	Grasslands Soil	MRRKLTPKEWMDDLLEYERTHEIAFASPRALLEARLIAEMDKARRLRPSNRRNGAARRRKAAAG
Ga0066710_1032923551	3300009012	Grasslands Soil	MKKKLTAEEWWNDILEYERTHEIAFASPRALLEARMIEEMDKARRPHRRDRRNGVSHRRKAVAG
Ga0066710_1032964772	3300009012	Grasslands Soil	MKSKLTPKEWMDDLLEYERTHEIAFASPRALLEARMIAAIDKARRPRRRARRNGVTHRRKIGE
Ga0105106_108208652	3300009078	Freshwater Sediment	MKKKLTVDEWWDDLMEYEATHPIAFASPRALVEARLIAELDKARSPRRRTHRNGVSRRCKAVVA*
Ga0105047_103993913	3300009083	Freshwater	MKTATQTKLTDEAWLRDLFEYERTHEIAFASPRALLEARMIAELDKARRPRRRAQRNGAAARPRRSGAAV*
Ga0105046_103753533	3300009084	Freshwater	VNKANFSLVKTPAQKKLTDGEWLRECFEYERTHEIAFASPKALLEARMIAAMDKARRPRRRAGRNGVAPRPKAAAR*
Ga0099828_110446841	3300009089	Vadose Zone Soil	GNLADMKTKLTAAEKWWNDIAEYEATHEIAFASPRALLEARMIEAMDKARRPHRRAHRNGVARHRKTVAG*
Ga0099827_113184132	3300009090	Vadose Zone Soil	MKKKLSADEWWDDIVEYERTHEIAFASPRALLEAHMIAAMDKARRPRRRVHRNGVARHRKAVIR*
Ga0075418_119484752	3300009100	Populus Rhizosphere	MKTKPTAAEKWWNDIVEYERTHEIAFASPRALLEARMIEALDKARRPRRRAPRNGGAPRRKVVAA*
Ga0066709_1008863892	3300009137	Grasslands Soil	MIDMKTRRKRDWLDECFEYERTHPIAFASPRALLEARMIAEMDKARRPRRRARRNGAADRRKVAAR*
Ga0066709_1014249582	3300009137	Grasslands Soil	MKKKLTAEEWWNDIVEYERTHEIAFASPRALLEARMIAEMDKARRPHRRAQRNGTARRRKAVAG*
Ga0066709_1014315982	3300009137	Grasslands Soil	MKRKRKRDWLDECFEYERTHEIAFASPRALLEARMIAAMDKARRPRRRARRNGVAPRRKTAAA*
Ga0066709_1035491341	3300009137	Grasslands Soil	GLTKPRCEGTITDMKTKRKRDWLDECFEYERTHPMVFASPRALLEARMIAEMDRARRPRRRAHRNGVAHRRKVAAG*
Ga0114129_122160232	3300009147	Populus Rhizosphere	MKTKPTAAEKWWNDIVEYERTHEIAFASPRALLEARMIEAMDKAGRPRRRAPRNGVAPRRKTATT*
Ga0103858_101101381	3300009239	River Water	EKWWNDIVEYESTHEIAFASPRALLEAHMIAAMDKPRRPRRRTKRGGVARRRKVAAA*
Ga0103869_100413282	3300009257	River Water	MKPKLTAAQRAAEKWWNDIVEYESTHEIAFASPRALLEAHMIAAMDKPRRPRRRTKRGGVARRRKVAAA*
Ga0103870_10171121	3300009261	River Water	AAEKWWNDIVEYESTHEIAFASPRALLEAHMIAAMDKPRRPRRRTKRGGVARRRKVAAA*
Ga0116225_13633442	3300009524	Peatlands Soil	MKTARKRDWLDDLFDYEAKHPIAFASPGALREARLIAELEKARRSLRRARRNGAPPRRKAAVG*
Ga0131077_100734852	3300009873	Wastewater	MKQQLAADKWWNDIVEYERTHEIAFASPHALLEARMIAEMDKARRPRPRAHGNGASTRRRRNAVAA*
Ga0134067_100121571	3300010321	Grasslands Soil	TDMKKKLTAEEWWNDIVEYERTHEIAFASPRALLEARMIAEIDKARRPRRRARRNGAVRPRKVAAR*
Ga0134111_101864213	3300010329	Grasslands Soil	MKKKLTAEEWWNDIVEYERTHEIAFASPRALLEARMIAEMDKARRPHRRDRRNSVSHRRKAVAR*
Ga0134080_106270402	3300010333	Grasslands Soil	GRNLSEMKKKLTPEEWWNDLVEYERKHEIAFASPRALLEARMIEAMDKARRPRRRNHHNGVARRRKALAG*
Ga0136449_1027035411	3300010379	Peatlands Soil	MKTQRKRDWLDDVFDYEATHPIAFASPRALVEARLIAEMDKARRPRRGTQRNGAAHHDRRRNRAAA*
Ga0136847_109340911	3300010391	Freshwater Sediment	SAAKRDMKAQRKRDWLDECFEYERTHEIAFASPGALREARLIAELDRVKRNRRARRRKAVAG*
Ga0136847_123215702	3300010391	Freshwater Sediment	MKVAAQKKLKGEDWLEECFEYERTHEIAFASPRALLEARMIAEMDKARSPRRRAHRNGIAHRRKAVAA*
Ga0136847_1344967710	3300010391	Freshwater Sediment	MKKKLTAEAWWNDIVEYERTHEIAFASPRALLEARMIAEMDKARRPRRHARRNGVAHRRKAVPA*
Ga0137389_106507201	3300012096	Vadose Zone Soil	VKAAVERKLKGEDWLRECFEYEASHPIAFASPRALLEARLIAEMDRARRPRQSARQNGGVHRRKAAPR*
Ga0137389_113754283	3300012096	Vadose Zone Soil	VKTDAQKKLTDEEWLRDIFEYERTHEIAFASPRALVEARLIAELDKARSPHRRAHRNGVAHRRKAVVG*
Ga0137364_101658952	3300012198	Vadose Zone Soil	MKRKLTPQEWMDDILEYERTHEIAFASPRALLEARMIAEMDKARRPRRRARRNGAVRPRKVAAR*
Ga0137364_102758842	3300012198	Vadose Zone Soil	VKAVAQKKLTDEEWLRDIFEYERTHPIAFASPRALLEARMIAEMDKARRPRRRARRNGAVRPPKVAAR*
Ga0137363_101599892	3300012202	Vadose Zone Soil	MNQGILIDMKTKLTAQEWWDDILEYERTHTIAFASPRALLEARMIAEMDKARRPRRRVRRNGAAHRRKVAAR*
Ga0137363_117425211	3300012202	Vadose Zone Soil	MKTKLTAAEKWWTDIAEYEATHEIAFASPRALLEARMIEAMDKARRPHRRAHRNGVARHRKAVAG*
Ga0137399_111390491	3300012203	Vadose Zone Soil	ELFEYERTHEIAFASPRALLEARMIEAMDKARRPPRRNHQRNGVPQRSKVGAR*
Ga0137362_110726641	3300012205	Vadose Zone Soil	MKTKRKRDWLDECFEYERTHEIAFASPRALLEARMIAEMDKARRPRRRARRNGVAPRRKIVAA*
Ga0137362_111652622	3300012205	Vadose Zone Soil	MKTKLTAAEKWWNDIAEYEATHEIAFASPRALLEARMIEAMDKARRPHRRAHRNGVARHRKVVAG*
Ga0137380_107591422	3300012206	Vadose Zone Soil	MKRKLTPREWWDDLLEYERTHEIAFASPRALLEARMIAEMDKARRPRRRNPRNDVARRRKAVAG*
Ga0137378_107832932	3300012210	Vadose Zone Soil	MKTKRKRDWLDECFEYERTHEIAFASPRALLEARMIAEVDKARRPRRRARRNGVAHRRKTVAA*
Ga0137378_117261871	3300012210	Vadose Zone Soil	MNQGILIDMKTKLTAQEWWDDILEYERTHTIAFASPRALLEARMIAEMDKARRPRRRVRRNGAAHRRKVAAHKV*
Ga0137377_108480381	3300012211	Vadose Zone Soil	MKKKLTAEEWWNDIVEYERTHEIAFASPRALLEARMIAEMDKARRPHRRDRRNGVSHRRKAVAG*
Ga0150985_1163153281	3300012212	Avena Fatua Rhizosphere	RKRDWLDECFEYERTHEIAFASPRALLEAHMIAEMEKARRSPRRAHRNGIGARRKISLR*
Ga0137387_111033191	3300012349	Vadose Zone Soil	MKKKLTAEEWWNDIVEYERTHEIAFASPRALLKARMIAEMDKARRPRRRAHRNGTAHRRKTVAG*
Ga0137386_110663912	3300012351	Vadose Zone Soil	MKKKLTPKEWMDDLLEYERTHEIAFASPRALLEARMIEAMDKARRPRRRNHQRNGVPKSSRV
Ga0137366_110525453	3300012354	Vadose Zone Soil	MKAQRKRDWLDECFEYEATHPIAFASPRALMEARLIAEMDKARLPHRRNHRNGVARRRKAVPG*
Ga0137366_111258451	3300012354	Vadose Zone Soil	MKKKLTAEEWWNDIVEYERTHEIAFASPRALLEARMIAEMDKARRPHRRARRNGNGAAPATH
Ga0137371_105702472	3300012356	Vadose Zone Soil	MKTKRKRDWLDECFEYERTHPMVFASPRALLEARMIAEMDRARRPRRRAHRNGVAHRRKVAAG*
Ga0137384_105575222	3300012357	Vadose Zone Soil	MKKKLTAEEWWNDIVEYERTHEIAFASPRALLEARMIEAMDKARRPPRRNHQRNGVPQRSKVGAR*
Ga0137375_102253743	3300012360	Vadose Zone Soil	MKKKLTAEEWWNDIVEYERTHEIAFASPRALLEARMIAEMDKDCRPHRRERRNGVSHRRKAVAR*
Ga0137360_108345651	3300012361	Vadose Zone Soil	MKKKLTAEEWWNDIVEYERTHEIAFASPRALLEARMIEAMDKARRPHRRDRRNGVSHRRKAVAG*
Ga0137360_117069011	3300012361	Vadose Zone Soil	MNQGILIDMKTKLTAQEWWDDILEYERTHTIAFASPRALLEARMIAEMDKARRPRRRARRNGVAPRRKIVAA*
Ga0137360_117323082	3300012361	Vadose Zone Soil	MKTKLTAAEKWWNDIAEYEATHEIAFASPRALLEARMIEAMDKARRPHRRAHRNGVARPRKAVAG*
Ga0137361_107750511	3300012362	Vadose Zone Soil	MKTKLTAQEWWDDILEYERTHTIAFASPRALLEARMIAEMDKARRPRRRVRRN
Ga0137390_113254792	3300012363	Vadose Zone Soil	MKAQRKRDWLDECFEYEATHPIAFASPRALVEARLIAELDKARRPYRRNHRNGVAHSRKTVAG*
Ga0137373_102719784	3300012532	Vadose Zone Soil	MKRKLTPQEWMDDILEYERTHQIAFASPRALMEARMIAEMDKARRPRRRAHRNGASPSRRRKAVAG*
Ga0137359_102811821	3300012923	Vadose Zone Soil	MKTDLTAAEKWWNDIAEYEATHEIAFASPRALLEARPIEAMDKARRPHRSAHRNGDARHRKAVAG*
Ga0137416_116811852	3300012927	Vadose Zone Soil	MKKKLTAEEWWNDIVEYERTHEIAFASPRALLEARMIAEMDEARRPRRRNHRNGVAHRRKAVAG*
Ga0137416_117751852	3300012927	Vadose Zone Soil	LRRKRLAGNLADTKTKLTTAEKWWNECAEYEATHEIAFASPRALLEARMIAEMDKARRPRRRKPVAG*
Ga0137410_106899292	3300012944	Vadose Zone Soil	MVDMETKRKRDWLDECFEYERTHEIAFASPRALLEARMIAEMDKARHPRHRARARRNGAAHRRKVEAHRVTKKVTRS*
Ga0134076_102095042	3300012976	Grasslands Soil	VKAVAQKKLTDEEWLRDIFEYERTHEIAFASPRALLEARMIAEMDKARRPRRRARRNGAAPRRKIVAG*
(restricted) Ga0172373_101052342	3300013131	Freshwater	MKTKLTAAEKWWNDCADYEATHEIVFASPSALREARLIVALEQARRPRRRARRKSTAAKAG*
Ga0181533_12409682	3300014152	Bog	MKRKLTPREWLDDLLEYERTHPIAFASPGALREARLIAELEKARRSLRRARRNGAPHRRQAAVG*
Ga0134078_100859942	3300014157	Grasslands Soil	KKKLTAEEWWNDIVEYERTHEIAFASPRALLEARMIAEIDKARRPRRRARRNGAVRPRKVAAR*
Ga0181526_104005822	3300014200	Bog	MKVKQTAREWLDDLWNYEDKHPIAFASPRALAEARLIAELDRARRLHRRTDRNGVPPRRKAAVS*
Ga0172379_104241532	3300014208	Groundwater	VKKKLTAEEWWNDILEYERTHEIAFASPRALLEARMIAEMDKARRPKRRARSGAAATRRKAVAA*
Ga0182013_100711253	3300014492	Bog	MLHDVKRKLTPKEWMDDLLEYERTHPIAFASPGALAEARLIAELEKARCPRRRTHRNGAADHHKAAVG*
Ga0182015_105905872	3300014495	Palsa	MLEVKVKQTAKEWLDDLWNYEDKHPIAFASPRALVEARLIAEMDRARRPQRRTHRNGVVHRRKALAA*
Ga0182024_110474172	3300014501	Permafrost	MKTVVQKKLTDEEWLRDVFDYEAKHPIAFASPRALVEARIIAEMDKARSHHRRARRNGLSHRRKAVAH*
Ga0163144_1002418210	3300015360	Freshwater Microbial Mat	MKAVAPKKLNGEDWLEECFEYERTHEIAFASPRALLEARMIAEMDKARRPHRRAQLNGVAHRRKTAVA*
Ga0169931_101876023	3300017788	Freshwater	MKTKLTAAEKWWNDCADYEATHEIVFASPSALREARLIVALEQARRPRRRARRKSTAAKA
Ga0187877_12951601	3300017931	Peatland	MKRKLTPREWLDDLLEYERTHPIAFASPGALREARLIAELEKARRSLRRARRNGAPHRRQAAVG
Ga0181520_101253071	3300017988	Bog	MLHDVKRKLTPKEWMDDLLEYERTHPIAFASPGALAEARLIAELEKARCPRRRTHRNGAA
Ga0184623_103414651	3300018056	Groundwater Sediment	MKKKLTANEWLNDILEYERTHEIAFASPRALLEARMIEAMDKARRPRRSTRRNGVAHRRKAVAG
Ga0184618_102696712	3300018071	Groundwater Sediment	MKANAQGKLKGEDWLRECFEYEATHPIAFASPRALVEARLIAEMDKARRPRRRARRNGVAHHRKAVAG
Ga0190265_102431573	3300018422	Soil	MKTKLTAAEKWWNECAEYEATHEIAFASPRALLEARMIEAMDKARSPRRRAHRNGVAHRRKAVAR
Ga0066669_104051511	3300018482	Grasslands Soil	MKKKLTAEEWWNDIVEYERTHEIAFASPRALLEARMIEEMDKARRPHRRDRRNGVSHRRKAVAG
Ga0187893_105889142	3300019487	Microbial Mat On Rocks	MTDEEWLRDIFEYERTHEIAFASPRALLEARMIEAMDKARRPPRRNHRNGVAHRRKAVAG
Ga0193728_11033332	3300019890	Soil	VKAQRKRDWLDECFEYEAIHPIAFASPRALVEARLIAELDKTRRPHRRKHIKGVPRRRKTAAA
Ga0194113_100166194	3300020074	Freshwater Lake	MKRKLTPKDWLDDLLEYERTHEIAFASPRALLEARMIAEMDKARRPHRRVHRNGVARRRKLTAR
Ga0194113_108662452	3300020074	Freshwater Lake	MDDLLEYERTHEIAFASPRALLEARMIEAMDKARRPHRRAHRNGVAHRRKTVGR
Ga0194131_100213153	3300020193	Freshwater Lake	MDDLLEYERTHEIAFASPRALLEARMIAEMDKARRPHRRAHRNGVARRRKVAAH
Ga0194131_100442904	3300020193	Freshwater Lake	MKKKLTGAEKWWNECAEYEATHEIAFASPRALLEARMIAELDKARRPHRRAHRNGVARRRKLASR
Ga0194131_100472322	3300020193	Freshwater Lake	MKRKLTPREWMDDLLEYERTHEIAFASPRALLEARMIEAMDKARRPHRRAHRNGVAHRRKTVGR
Ga0194131_102308192	3300020193	Freshwater Lake	MTMKLTAAEKWWNDCAEYEATHEIAFASPRALLEARMIAELDKARRPHRRAHRNSVARRRKLASR
Ga0163150_102197672	3300020195	Freshwater Microbial Mat	MKAVAPKKLNGEDWLEECFEYERTHEIAFASPRALLEARMIAEMDKARRPHRRAQLNGVAHRRKTAVA
Ga0163152_100193146	3300020213	Freshwater Microbial Mat	MKAKRKRDWLDECFEYERTHTIAFASPHALLEARMIAEMDKARRAHRNGVAHRRKAVAG
Ga0194132_105290671	3300020214	Freshwater Lake	LQRPPNQIIFPEMKRKLTPREWMDDLLEYERTHEIAFASPRALLEARMIEAMDKARRPHRRAHRNGVAHRRKTVGR
Ga0194119_103527992	3300020220	Freshwater Lake	MKRKLTPREWMDDLLEYERTHEIAFASPRALLEARMIAEMDKARRPHRRAHRNGVARRRKVAAH
Ga0194126_101985414	3300020603	Freshwater Lake	MKKKLTGAEKWWNECAEYEATHEIAFASPRALLEARMIAELDKARRPHRRAHRNSVVRRRKLASR
Ga0194051_10881372	3300021470	Anoxic Zone Freshwater	MKTKLTPTEWMDDILEYERTHEIAFASPRALLEARIIEAMDKARRPRRAKRKAAAPRKLASA
Ga0194043_100185611	3300021473	Anoxic Zone Freshwater	MKTKLTPTEWMDDILEYERTHEIAFAAPRALLEARIIEAMDKARRPRRAKRKAAAPRKLASA
Ga0212123_103559163	3300022557	Iron-Sulfur Acid Spring	MKRKLTPQEWMDDILEYERTHEIAFASPRALLEARMIAEMDKARRPRRRAHRNGVSHRRKAVAG
Ga0207670_100330893	3300025936	Switchgrass Rhizosphere	MKPKLTAAEKWWKDCADYEETHGIAFASPRALLEARMIEAMDKARRPRRAKRKAAAFRKLASA
Ga0209154_10201555	3300026317	Soil	VKAVAQKKLTDEEWLRDIFEYERTHPIAFASPRALLEARMIAEMDKARRPRRRARRNGAVRPRKVAAR
Ga0209156_101335602	3300026547	Soil	MKKKLTAEEWWNDIVEYERTHEIAFASPRALLEARMIAEIDKARRPRRRARRNGAVRPRKVAAR
Ga0209577_100753702	3300026552	Soil	MKKKLTAEEWWNDIVEYERTHEIAFASPRALLEARMIAEMDKARRPRRRARRNGAVRPRKVAAR
Ga0209726_100507082	3300027815	Groundwater	MKTKRRRDWLDEVFEYERTHVIAFASPRALLEARMIAEMDKARRPRRRALRNGATHPRKAVAA
Ga0209181_101669775	3300027878	Freshwater	MANFSLVKTPAQKKLTDEEWLRECFEYERTHEIAFASPKALLEARMIAAMDKARRPRRRAGRNGVAPRPKAAAR
Ga0137415_107748061	3300028536	Vadose Zone Soil	MKKKLTAEEWWNDIVEYERTHEIAFASPRALLEARMIAEMDEARRPRRRNHRNGVAHRRKAVAG
Ga0268298_102531272	3300028804	Activated Sludge	MKTKLTAAEKWWNECAEYEATHEIAFASPRALLEARMIEAMDKARSPRRRAHRNGVARRRKTVAR
Ga0170834_1068586992	3300031057	Forest Soil	VKEKLTGEKWWNDLMEYERTHEIAFASPRALLEARMIAEMDRARRSHRRTRKNGAAHRRKAPAR
Ga0302326_102038784	3300031525	Palsa	MLEVKVKQTAKEWLDDLWNYEDKHPIAFASPRALVEARLIAEMDRARRPQRRTHRNGVVHRRKALAA
Ga0315901_102873372	3300031963	Freshwater	MKTKLTPTEWMDDILEYERTHEIAFASPRALLEARIIEAMDKARRPRRAKRKAAASRKLASA
Ga0315912_104902431	3300032157	Soil	MKTKLTAAEKWWNDCAEYEATHEIAFASPRALLEARMIEAMDKSRRPRRRARRNG
Ga0315912_114954982	3300032157	Soil	DEEWLRDIFEYERTHPIAFASPRALMEARLIAEMDKARRPRRRAHRNSVTHRRRAVAG
Ga0311301_100210619	3300032160	Peatlands Soil	MKTARKRDWLDDLFDYEAKHPIAFASPGALREARLIAELEKARRSLRRARRNGAPPRRKAAVG
Ga0311301_117747832	3300032160	Peatlands Soil	MKTQRKRDWLDDVFDYEATHPIAFASPRALVEARLIAEMDKARRPRRGTQRNGAAHHDRRRNRAAA
Ga0315287_112619142	3300032397	Sediment	MKAAARKKLTDEEWLRDLFDYEAKHPIAFASPRALIEARLIAEMDKARRPRHEHRDGFVRRRKAMALG
Ga0335397_103013902	3300032420	Freshwater	MKTATQTKLTDEAWLRDLFEYERTHEIAFASPRALLEARMIAELDKARRPRRRAQRNGAAARPRRSGAAV
Ga0335071_111988862	3300032897	Soil	LPKRAGRRKFPEVKTVAQEKLTDEEWLRDIFEYERTHEIAFASPRALLEARMIAEMDKARRPHGRSRRSGGSRHRKIVTT
Ga0335077_119108771	3300033158	Soil	LQRNWQAYNLTDIKTKLTAAEKWWNDCAEYERTHEIAFASPRALMEARLIEVMDKVRRPRRRNHRNGAARRREAAVR
Ga0326728_1000170861	3300033402	Peat Soil	MKVKQTAREWLDDLWNYEDKHPVAFASPRALVEARLIAEMDRVRRPYRRADRNGAAHRRKAAVG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters