Metagenome Family F051770

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051770
Family Type	Metagenome
Number of Sequences	143
Average Sequence Length	60 residues
Representative Sequence	MAETKDPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDNPRAVDDEHPDKPDRD
Number of Associated Samples	119
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	48.59 %
% of genes near scaffold ends (potentially truncated)	30.77 %
% of genes from short scaffolds (< 2000 bps)	88.81 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.203 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (11.888 % of family members)
Environment Ontology (ENVO)	Unclassified (29.371 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.559 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.73% β-sheet: 2.27% Coil/Unstructured: 75.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF07291	MauE	26.57
PF10099	RskA	6.29
PF00994	MoCF_biosynth	5.59
PF01594	AI-2E_transport	4.90
PF13462	Thioredoxin_4	3.50
PF14437	MafB19-deam	2.10
PF01965	DJ-1_PfpI	1.40
PF03453	MoeA_N	1.40
PF14108	ABA4-like	1.40
PF05816	TelA	0.70
PF13540	RCC1_2	0.70
PF12867	DinB_2	0.70
PF00657	Lipase_GDSL	0.70
PF13442	Cytochrome_CBB3	0.70
PF00510	COX3	0.70
PF00361	Proton_antipo_M	0.70
PF02075	RuvC	0.70
PF00932	LTD	0.70
PF07589	PEP-CTERM	0.70
PF13546	DDE_5	0.70
PF01135	PCMT	0.70
PF02777	Sod_Fe_C	0.70
PF02586	SRAP	0.70
PF00383	dCMP_cyt_deam_1	0.70
PF00155	Aminotran_1_2	0.70
PF09852	DUF2079	0.70
PF08281	Sigma70_r4_2	0.70
PF01979	Amidohydro_1	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	4.90
COG0303	Molybdopterin Mo-transferase (molybdopterin biosynthesis)	Coenzyme transport and metabolism [H]	1.40
COG0605	Superoxide dismutase	Inorganic ion transport and metabolism [P]	0.70
COG0817	Holliday junction resolvasome RuvABC endonuclease subunit RuvC	Replication, recombination and repair [L]	0.70
COG1845	Heme/copper-type cytochrome/quinol oxidase, subunit 3	Energy production and conversion [C]	0.70
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.70
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.70
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.70
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.70
COG3853	Uncharacterized conserved protein YaaN involved in tellurite resistance	Defense mechanisms [V]	0.70
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.20 %
Unclassified	root	N/A	2.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.20 %
Unclassified	root	N/A	2.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.20 %
Unclassified	root	N/A	2.80 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	71.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.59 %
Unclassified	root	N/A	2.80 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	1.40 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.70 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.70 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.70 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	65.73 %
Unclassified	root	N/A	2.80 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.40 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.40 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.40 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.70 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.70 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	65.73 %
Unclassified	root	N/A	2.80 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.40 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.40 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.40 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.70 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.70 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	65.73 %
Unclassified	root	N/A	2.80 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1.40 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.40 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.40 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.70 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.70 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	65.73 %
Unclassified	root	N/A	2.80 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1.40 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.40 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.40 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.70 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.70 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	65.73 %
Unclassified	root	N/A	2.80 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.40 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.40 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.70 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.70 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.70 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	65.73 %
Unclassified	root	N/A	2.80 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.40 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.40 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.70 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.70 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.70 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_103044418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1271	Open in IMG/M
3300000956\|JGI10216J12902_109849548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300000956\|JGI10216J12902_120535044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300002245\|JGIcombinedJ26739_101606975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300003319\|soilL2_10228333	All Organisms → cellular organisms → Bacteria	2568	Open in IMG/M
3300004114\|Ga0062593_100307265	All Organisms → cellular organisms → Bacteria → Proteobacteria	1356	Open in IMG/M
3300004156\|Ga0062589_100709979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	894	Open in IMG/M
3300004157\|Ga0062590_100106521	All Organisms → cellular organisms → Bacteria	1793	Open in IMG/M
3300004157\|Ga0062590_100113532	All Organisms → cellular organisms → Bacteria	1754	Open in IMG/M
3300004157\|Ga0062590_101232207	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300004463\|Ga0063356_100282493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2042	Open in IMG/M
3300004463\|Ga0063356_100779196	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1330	Open in IMG/M
3300004463\|Ga0063356_102237685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	833	Open in IMG/M
3300004479\|Ga0062595_100160905	All Organisms → cellular organisms → Bacteria → Proteobacteria	1324	Open in IMG/M
3300004643\|Ga0062591_101319944	All Organisms → cellular organisms → Bacteria → Acidobacteria	710	Open in IMG/M
3300005093\|Ga0062594_100263497	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1274	Open in IMG/M
3300005093\|Ga0062594_102152206	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300005175\|Ga0066673_10245085	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300005187\|Ga0066675_10696223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300005293\|Ga0065715_11032672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300005295\|Ga0065707_10693423	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300005328\|Ga0070676_11347542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300005331\|Ga0070670_100198247	All Organisms → cellular organisms → Bacteria	1744	Open in IMG/M
3300005332\|Ga0066388_100995698	All Organisms → cellular organisms → Bacteria → Proteobacteria	1403	Open in IMG/M
3300005332\|Ga0066388_101197259	All Organisms → cellular organisms → Bacteria → Proteobacteria	1298	Open in IMG/M
3300005333\|Ga0070677_10086787	All Organisms → cellular organisms → Bacteria → Proteobacteria	1352	Open in IMG/M
3300005343\|Ga0070687_100192094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1231	Open in IMG/M
3300005354\|Ga0070675_102259693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300005356\|Ga0070674_100027013	All Organisms → cellular organisms → Bacteria	3757	Open in IMG/M
3300005364\|Ga0070673_101947972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300005444\|Ga0070694_101783759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300005456\|Ga0070678_102336260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300005459\|Ga0068867_101612880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300005529\|Ga0070741_11484770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300005544\|Ga0070686_101007993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300005617\|Ga0068859_100015483	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	7662	Open in IMG/M
3300005843\|Ga0068860_101504227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300005985\|Ga0081539_10498413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300006845\|Ga0075421_100360557	All Organisms → cellular organisms → Bacteria	1754	Open in IMG/M
3300006845\|Ga0075421_102294964	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300006894\|Ga0079215_10356488	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300006894\|Ga0079215_10363256	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300006918\|Ga0079216_11598829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300009053\|Ga0105095_10132268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1358	Open in IMG/M
3300009078\|Ga0105106_10017327	Not Available	5276	Open in IMG/M
3300009078\|Ga0105106_10308543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1145	Open in IMG/M
3300009078\|Ga0105106_10930668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300009087\|Ga0105107_10011338	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	6157	Open in IMG/M
3300009089\|Ga0099828_11781302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300009094\|Ga0111539_10000008	All Organisms → cellular organisms → Bacteria	382609	Open in IMG/M
3300009162\|Ga0075423_10250462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1856	Open in IMG/M
3300009609\|Ga0105347_1098902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1098	Open in IMG/M
3300009610\|Ga0105340_1339137	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	663	Open in IMG/M
3300009610\|Ga0105340_1538115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300010045\|Ga0126311_10573542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	891	Open in IMG/M
3300010399\|Ga0134127_12018617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300010399\|Ga0134127_12713613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300010403\|Ga0134123_11182266	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300011119\|Ga0105246_11354042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	662	Open in IMG/M
3300011400\|Ga0137312_1055787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300011412\|Ga0137424_1012439	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1168	Open in IMG/M
3300011415\|Ga0137325_1034360	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1043	Open in IMG/M
3300011421\|Ga0137462_1156033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300012034\|Ga0137453_1103740	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	561	Open in IMG/M
3300012199\|Ga0137383_11300842	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300012212\|Ga0150985_104085168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300012212\|Ga0150985_108146662	All Organisms → cellular organisms → Bacteria	2286	Open in IMG/M
3300012354\|Ga0137366_10479212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	900	Open in IMG/M
3300012469\|Ga0150984_106318654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300012469\|Ga0150984_110412481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300012469\|Ga0150984_118476446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300012944\|Ga0137410_10367185	All Organisms → cellular organisms → Bacteria	1154	Open in IMG/M
3300014149\|Ga0181613_1202359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300014150\|Ga0134081_10143450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	780	Open in IMG/M
3300014326\|Ga0157380_10171440	All Organisms → cellular organisms → Bacteria	1897	Open in IMG/M
3300014326\|Ga0157380_10233067	All Organisms → cellular organisms → Bacteria	1655	Open in IMG/M
3300014865\|Ga0180078_1089517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300015201\|Ga0173478_10695648	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300015245\|Ga0137409_11125814	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300015360\|Ga0163144_10097181	All Organisms → cellular organisms → Bacteria	4706	Open in IMG/M
3300015371\|Ga0132258_13998094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1001	Open in IMG/M
3300015374\|Ga0132255_102543623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	782	Open in IMG/M
3300017965\|Ga0190266_10168707	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1008	Open in IMG/M
3300018027\|Ga0184605_10185075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	943	Open in IMG/M
3300018028\|Ga0184608_10152444	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	997	Open in IMG/M
3300018051\|Ga0184620_10215511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300018051\|Ga0184620_10351086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300018053\|Ga0184626_10247030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300018067\|Ga0184611_1002141	All Organisms → cellular organisms → Bacteria	4491	Open in IMG/M
3300018083\|Ga0184628_10352581	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300018084\|Ga0184629_10495381	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300018422\|Ga0190265_10264108	All Organisms → cellular organisms → Bacteria	1775	Open in IMG/M
3300018422\|Ga0190265_10400859	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1470	Open in IMG/M
3300018422\|Ga0190265_10696990	All Organisms → cellular organisms → Bacteria → Acidobacteria	1137	Open in IMG/M
3300018422\|Ga0190265_11982291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300018432\|Ga0190275_10110285	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2459	Open in IMG/M
3300018433\|Ga0066667_10517731	Not Available	985	Open in IMG/M
3300018469\|Ga0190270_12094710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300018476\|Ga0190274_12556938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300018476\|Ga0190274_12959344	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300018481\|Ga0190271_10076683	All Organisms → cellular organisms → Bacteria	2979	Open in IMG/M
3300018482\|Ga0066669_11568091	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300019362\|Ga0173479_10283750	Not Available	746	Open in IMG/M
3300019888\|Ga0193751_1167783	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	770	Open in IMG/M
3300020009\|Ga0193740_1065308	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300020020\|Ga0193738_1064880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1083	Open in IMG/M
3300020057\|Ga0163151_10200979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1167	Open in IMG/M
3300021078\|Ga0210381_10176200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300022892\|Ga0247753_1053649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300023066\|Ga0247793_1098171	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300023073\|Ga0247744_1095025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300025893\|Ga0207682_10191482	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	937	Open in IMG/M
3300025907\|Ga0207645_11167669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300025925\|Ga0207650_10167592	All Organisms → cellular organisms → Bacteria	1744	Open in IMG/M
3300025927\|Ga0207687_11945555	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300025930\|Ga0207701_11319739	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300025933\|Ga0207706_10929758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300025937\|Ga0207669_10888817	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300025937\|Ga0207669_11260242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300026089\|Ga0207648_11551688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300026552\|Ga0209577_10683405	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300027651\|Ga0209217_1182825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300027713\|Ga0209286_1312117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300027818\|Ga0209706_10018444	All Organisms → cellular organisms → Bacteria	3550	Open in IMG/M
3300027907\|Ga0207428_10000019	All Organisms → cellular organisms → Bacteria	276945	Open in IMG/M
3300027915\|Ga0209069_10706278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300027979\|Ga0209705_10365352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300028047\|Ga0209526_10342546	All Organisms → cellular organisms → Bacteria → Acidobacteria	1003	Open in IMG/M
3300028578\|Ga0272482_10149782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300031228\|Ga0299914_10776776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	801	Open in IMG/M
3300031229\|Ga0299913_11635224	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300031538\|Ga0310888_10749149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300031847\|Ga0310907_10589515	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300031908\|Ga0310900_10434588	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1005	Open in IMG/M
3300031965\|Ga0326597_11565354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300032003\|Ga0310897_10364520	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	676	Open in IMG/M
3300032157\|Ga0315912_11637046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300032205\|Ga0307472_102536441	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300033417\|Ga0214471_10839182	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300034115\|Ga0364945_0260251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300034128\|Ga0370490_0005763	All Organisms → cellular organisms → Bacteria → Acidobacteria	4462	Open in IMG/M
3300034690\|Ga0364923_0011801	All Organisms → cellular organisms → Bacteria → Acidobacteria	1914	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.43%
Host-Associated	Host-Associated	26.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.45%
Plants	Host-Associated → Plants	26.57%
Aquatic	Environmental → Aquatic	20.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.78%
Sediment	Environmental → Aquatic → Sediment	12.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.79%
Freshwater	Environmental → Aquatic → Freshwater	7.69%
Floodplain	Environmental → Terrestrial → Floodplain	2.10%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.59%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.49%
Sediment	Environmental → Aquatic → Freshwater → Sediment	6.29%
Loam	Environmental → Terrestrial → Soil → Loam	6.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.29%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.50%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.10%
Lake	Environmental → Aquatic → Freshwater → Lake	1.40%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.70%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.70%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.28%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	11.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.49%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	6.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.50%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.80%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.10%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.10%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.40%
Neutral	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Neutral	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.70%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.70%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.89%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	6.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.29%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	5.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	5.59%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.10%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.10%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.10%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.10%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.10%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	1.40%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.40%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.40%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.40%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.40%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.40%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.40%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.70%
Anoxic, Neutral-Ph, Fe/Si-Rich Hot Spring Water	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Neutral → Anoxic, Neutral-Ph, Fe/Si-Rich Hot Spring Water	0.70%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.70%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.70%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.70%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.70%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.70%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.70%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.70%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011400	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT133_2	Environmental	Open in IMG/M
3300011412	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2	Environmental	Open in IMG/M
3300011415	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT469_2	Environmental	Open in IMG/M
3300011421	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT769_2	Environmental	Open in IMG/M
3300012034	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT526_2	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014149	In situ water column microbial community from the vent pool of Chocolate Pots hot spring, Yellowstone National Park, Wyoming, USA - CP Vent Pool	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014865	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT499_16_10D	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015360	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020009	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s1	Environmental	Open in IMG/M
3300020020	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1	Environmental	Open in IMG/M
3300020057	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP5.IB-2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300023066	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6	Environmental	Open in IMG/M
3300023073	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S154-409C-5	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027713	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027818	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300027979	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034128	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034690	Sediment microbial communities from East River floodplain, Colorado, United States - 60_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1030444183	3300000956	Soil	MAEPKDPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDNPRAVDDEHPDKPDRD
JGI10216J12902_1098495482	3300000956	Soil	MAEKKDPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDNPRAVDDEHPDKPDLD
JGI10216J12902_1205350442	3300000956	Soil	MAEPKDPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDTPRAVDDEHPDKPDRD
JGIcombinedJ26739_1016069751	3300002245	Forest Soil	RAGYTASMAEKKDPLRERIEELGRMNTIYSEGAWEDWKPGKPPVHDHYTHEVPRAIDDEHPALPDRG*
soilL2_102283333	3300003319	Sugarcane Root And Bulk Soil	MAETKDPHRERIEELGRMNTIYSERPWHDWKPGKPPKHDKFTHDVPRQVDDEHPDKR*
Ga0062593_1003072653	3300004114	Soil	MSDSTKALREAIENLGRMNTIYGERKWDDWKPGDPPKHDKFTHDEPRKIDDEHPALPDRD
Ga0062589_1007099792	3300004156	Soil	LYHGGYNNDMAEKKDPLRERLEELGRMNSLYVERPWHDWRPGKPPVHDHFTHEVPRAIDDEQPELPDRD*
Ga0062590_1001065212	3300004157	Soil	MADTPKDPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDTPREVDDEHPDKADRD*
Ga0062590_1001135322	3300004157	Soil	MGMADTPRDPHRERIEELGRMNTIYSERPWHDWKPGSPPKHDKFTHGTPRAVDDEHPDKPDRD*
Ga0062590_1012322072	3300004157	Soil	MAETKDPHRERIEELGRMNTIYSENPWHDWKPGAPPKHDHFTHDNPRAVDDEHPDKPDRD
Ga0063356_1002824931	3300004463	Arabidopsis Thaliana Rhizosphere	MAETKDPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDVPRAADDEHPDKPDRD
Ga0063356_1007791963	3300004463	Arabidopsis Thaliana Rhizosphere	MADAPKDPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDKFTHDTPRAVDDEHPDKPDRD*
Ga0063356_1022376853	3300004463	Arabidopsis Thaliana Rhizosphere	MAEPKDPHRERIEELGRMNTIYSERPWHDWKPGTAPKHDHFTHDNPPAVDDEHPDKPDRD
Ga0062595_1001609051	3300004479	Soil	REAIENLGRMNTIYGERKWDDWKPGDPPKHDKFTHDEPRKIDDEHPALPDRD*
Ga0062591_1013199441	3300004643	Soil	NMGMADTPRDPHRERIEELGRMNTIYSERPWHDWKPGSPPKHDKFTHGTPRAVDDEHPDKPDRD*
Ga0062594_1002634971	3300005093	Soil	MAEKKDPLRERLEELGRMNSLYVERPWHDWRPGKPPVHDHFTHEVPRAIDDEHPELPDRD
Ga0062594_1021522062	3300005093	Soil	MSDSTKALRESIENLGRMNTIYGERKWDDWKPGDPPKHDKFTHDEPRKIDDEHPALPDRD
Ga0066673_102450851	3300005175	Soil	ALSFSSERQAKGMAEKKDPLRERIEELGRMNTIYSERAWEDWKPGKPPVHDHYTHDIPRAIDDEHPELPDRD*
Ga0066675_106962231	3300005187	Soil	MAEKKDPLRERIEELGRMNTIYSERAWEDWKPGKPPVHDHFTHDIPRAIDDEHPELPDRD
Ga0065715_110326721	3300005293	Miscanthus Rhizosphere	MAEKKDPLRERLEELGRMNSLYVERPWHDWRPGKPPVHDHFTHEVPRAIDDE
Ga0065707_106934231	3300005295	Switchgrass Rhizosphere	MAEKKDPLRERLEELGRMNSLYVERPWHDWKPGQPPVHDHFTHDVPRAIDDEIPDLPDRD
Ga0070676_113475422	3300005328	Miscanthus Rhizosphere	YNNDMAEKKDPLRERLEELGRMNSLYVERPWHDWRPGKPPVHDHFTHEVPRAIDDEHPELPDRD*
Ga0070670_1001982475	3300005331	Switchgrass Rhizosphere	IEELGRMNTIYSERPWHDWKPGAPPKHDHFTHDTPRAVDDEHPDKPDRD*
Ga0066388_1009956981	3300005332	Tropical Forest Soil	MAEKKDPLRERIEELGRMNTLYGERAWEDWRPGKPPVLDHFTHGVPREVDDEHPALPDRD
Ga0066388_1011972593	3300005332	Tropical Forest Soil	MAEKEKKDPHRERIEELGRMNTLYGERAWEDWRPGQPPVHDHFTHEETEEDESQPPKRPDRK*
Ga0070677_100867873	3300005333	Miscanthus Rhizosphere	MDPHRRSIEELGRQNTIYSERPWHDWKPGDPPKHDHFTHEVPRQIDDEHPDKKDRD*
Ga0070687_1001920941	3300005343	Switchgrass Rhizosphere	EELGRMNSLYVERPWHDWRPGKPPVHDHFTHEVPRAIDDEHPELPDRD*
Ga0070675_1022596932	3300005354	Miscanthus Rhizosphere	MAETKDPHRERIEELGRMNTIYSERPWHDWKPGAPPKHDHFTHDNPRAVDDEHPDKPDRD
Ga0070674_1000270132	3300005356	Miscanthus Rhizosphere	MAEMDPHRRSIEELGRQNTIYSERPWHDWKPGDPPKHDHFTHEVPRQIDDEHPDKKDRD*
Ga0070673_1019479721	3300005364	Switchgrass Rhizosphere	MENRSMADKNPLRERLEELGRMNTLYSERAWADWKPGKKPVHDHFTHGVPRAVDDEVPDLPDRD*
Ga0070694_1017837591	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MADTPKDPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDTPRAVDDEHPEKPDRD*
Ga0070678_1023362601	3300005456	Miscanthus Rhizosphere	EELGRMNTIYSERPWHDWKPGAPPKHDHFTHDTPRAVDDEHPDKPDRD*
Ga0068867_1016128801	3300005459	Miscanthus Rhizosphere	MAEKKDPLRERLEELGRMNSLYVERPWHDWKPGKPPVHDHFTHEVPREIDDE
Ga0070741_114847702	3300005529	Surface Soil	MAEKDKKDPHRERIEELGRMNTLYGENPWKDWRPSTPPVHDHFTHDNPTEVDDEHPGLPDRD*
Ga0070686_1010079932	3300005544	Switchgrass Rhizosphere	IENLGRMNTIYGERKWDDWKPGDPPKHDKFTHDEPRKIDDEHPALPDRD*
Ga0068859_1000154831	3300005617	Switchgrass Rhizosphere	KALREAIENLGRMNTIYGERKWDDWKPGDPPKHDKFTHDEPRKIDDEHPALPDRD*
Ga0068860_1015042271	3300005843	Switchgrass Rhizosphere	NDMAEKKDPLRERLEELGRMNSLYVERPWHDWRPGKPPVHDHFTHEVPRAIDDEHPELPDRD*
Ga0081539_104984132	3300005985	Tabebuia Heterophylla Rhizosphere	MADDPWKALRERIEQLGRMNTIYSERKWHDWKPGTPPKHDHFTHGTPRRIDDEHPKLPDRD*
Ga0075421_1003605573	3300006845	Populus Rhizosphere	MAETKDPHRERIEELGRMNTIYSERPWHDWKPGKPPKHDKFTHDVPRQIDDEHPDKPDRD
Ga0075421_1022949642	3300006845	Populus Rhizosphere	MAEPKNPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDNPPAVDDEHPDKPDRD
Ga0079215_103564882	3300006894	Agricultural Soil	MAEPKNPLRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDNPRAVDDEHPDKPDRD
Ga0079215_103632562	3300006894	Agricultural Soil	MAEPKNPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDNPRAVDDEHPDKPDRD
Ga0079216_115988292	3300006918	Agricultural Soil	MAEKKDPHRERIEELGRMNTIYSERPWHDWKPGMPPKHDHFTHDNPRAVDDEHPDKPDRD
Ga0105095_101322683	3300009053	Freshwater Sediment	MERMADTPKDPHRERIEELGRMNTIYSERPWHDWKPGSPPKHDHFTHDTPRDVDDEHPDKPDRD*
Ga0105106_1001732710	3300009078	Freshwater Sediment	MADTPKDPHRERIEELGRMNTIYSERPWHDWKPGSPPKHDHFTHDTPRDVDDEHPDKPDRD*
Ga0105106_103085432	3300009078	Freshwater Sediment	MERMADTPKDPHRERIEELGRMNTIYSERPWEDWKPGSPPKHDKFTHDRPRAVDDEHPDKPDRD*
Ga0105106_109306681	3300009078	Freshwater Sediment	MAESKDPHRERIEELGRMNTIYSERPWHDWKPGTPPRHDHFTHDNPPAVDDEHPDKPDRD
Ga0105107_100113383	3300009087	Freshwater Sediment	MADTPKDPHRERIEELGRMNTIYSERPWDDWKPGSPPKHDKFTHDTPRAVDDEHPDKPDRD*
Ga0099828_117813021	3300009089	Vadose Zone Soil	TATQGEPRMAEKKDPLRERIEELGRMNTIYSEGAWEDWKPGKPPVHDHYTHDVPRAIDDEHPDLPDRD*
Ga0111539_10000008103	3300009094	Populus Rhizosphere	MLSAGESMAETKDPHRERIEELGRMNTIYSERPWHDWKPGAPPKHDHFTHDTPRPVDDEHPDKPDRD*
Ga0075423_102504622	3300009162	Populus Rhizosphere	MSDSTKALRESIENLGRMNTIYGERKWDDWKPGDPPKQDKFTHDVPRKIDDEHPALPDRD
Ga0105347_10989023	3300009609	Soil	MLSAGEAMAETKDPHRERIEELGRMNTIYSENPWHDWKPGAPPKHDHFTHDNPRAVDDEQPDKPDRD*
Ga0105340_13391371	3300009610	Soil	MAEKDPLRERIEELGRMNTMYSERPWHDWKPGDPPKHDHFTHDVPRPIDDEHPDKPDR
Ga0105340_15381152	3300009610	Soil	MAETKDPLRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDNPPAVDDEHPDKPDRD
Ga0126311_105735422	3300010045	Serpentine Soil	MAETKDPHRRQIEELGRMNTLYSERPWHDWKPGAPPKHDHFTHDNPRAVDDEHPDKPDRD
Ga0134127_120186171	3300010399	Terrestrial Soil	MADTPKDPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDTPRAVDDEHPDKKDRD*
Ga0134127_127136131	3300010399	Terrestrial Soil	TKALRESIENLGRMNTIYGERKWDDWKPGDPPKQDKFTHDVPRKIDDEHPTLPGKD*
Ga0134123_111822662	3300010403	Terrestrial Soil	MAEKKDPLRERLEELGRMNSLYVERPWHDWKPGQPPVHDHFTHEVPREIDDEHPELPDRD
Ga0105246_113540422	3300011119	Miscanthus Rhizosphere	MADTPKDPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDTPRAVDDEHPDKP
Ga0137312_10557872	3300011400	Soil	MLSAGEAMAETKDPHRERIEELGRMNTIYSENPWHDWKPGAPPKHDHFTHDNPPAVDDEHPDKPDRD*
Ga0137424_10124393	3300011412	Soil	MLSAGEAMAETKDPHRERIEQLGRMNTSYSENPWHDWKPGAPPKHDHFTHDNPRGVDDEHPDKPDRD*
Ga0137325_10343602	3300011415	Soil	MLSSGDAMAETKDPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDNPPAVDDEHPDKPDRD*
Ga0137462_11560331	3300011421	Soil	MLSAGEAMAETKDPHRERIEELGRMNTIYSENPWHDWKPGAPPKHDHFTHDNPRAVDDEHPDKPDRD*
Ga0137453_11037402	3300012034	Soil	MLSSGEAMAETKDPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDNPPAVDD
Ga0137383_113008421	3300012199	Vadose Zone Soil	MAEKKDPLRERIEELGRMNTLYSEGAWDDWKPGQPPVHDHFTHDVPRAIDDEHPELPDRD
Ga0150985_1040851682	3300012212	Avena Fatua Rhizosphere	MAEKKDPLRERLEELGRMNTLYGERAWEDWKPGRPPVRDHFTHDVPRAIDDEHPKLPDRD
Ga0150985_1081466625	3300012212	Avena Fatua Rhizosphere	MAEKKDPLRERLEELGRMNTMYGERAWEDWKPGRPPVRDHFTHDVPRAIDDEHPQLPDRD
Ga0137366_104792122	3300012354	Vadose Zone Soil	MAEKKDPLRERIEELGRMNTLYSEGAWEDWKPGQPPVHDHFTHDVPRAIDDEHPELPDRD
Ga0150984_1063186541	3300012469	Avena Fatua Rhizosphere	LRERLEELGRMNTMYGERAWEDWKPGKPPLHDHFTHEVPRAIDDEHPALPDRD*
Ga0150984_1104124811	3300012469	Avena Fatua Rhizosphere	KKDPLRERIEELGRMNTLYSERPWSDWKPGKPPIRDAFTHGVPRAIDDEHPDKPDRD*
Ga0150984_1184764461	3300012469	Avena Fatua Rhizosphere	DVADSWKALRERLEELGRMNALYTEKKWHDWKPGDPPKHDHFTHDAPRRIDDEHPDLPDRD*
Ga0137410_103671852	3300012944	Vadose Zone Soil	MAEKKDPLRERIEELGRMNTIYSERAWEDWKPGKPPVHDHYTHDVPRAIDDEHPEPPDRD
Ga0181613_12023591	3300014149	Anoxic, Neutral-Ph, Fe/Si-Rich Hot Spring Water	MAETKDPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDTPRAVDDEHPDKADRD
Ga0134081_101434502	3300014150	Grasslands Soil	MAEKKDPLRERIEELGRMNTIYSERAWEDWKPGKPPVHDHYTHDIPRAIDDEFPELPDRD
Ga0157380_101714401	3300014326	Switchgrass Rhizosphere	HRERIEELGRMNTIYSERPWHNWKPGAPPKHDHFTHETPRAVDDEHPDKPDRD*
Ga0157380_102330671	3300014326	Switchgrass Rhizosphere	MAEKDPLRERIEELGRMNTIYSERPWHDWKPGAPPVHDHFTHDVPRQIDDEHPDKPGID*
Ga0180078_10895171	3300014865	Soil	MLSSGEAMADTKDPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHYTHENPPAVDDEHPDKPDRD*
Ga0173478_106956482	3300015201	Soil	MPEPKDPHRERIEELGRMNTIYSERPWHDWKPGAPPKHDHFTHETPRAVDD
Ga0137409_111258141	3300015245	Vadose Zone Soil	MAEKEDPLRERIEELGRMNTLYSEGAWDDWKPGKPPVHDHYTHDIPRAIDDEHPDLPDRD
Ga0163144_100971817	3300015360	Freshwater Microbial Mat	MAAEKDPLRKSIEELGRMNTIYSERPWHDWKPGDPPKNDHFTHEVPRKIDDEHPDKKGID
Ga0132258_139980942	3300015371	Arabidopsis Rhizosphere	MAEKKDPLRERLEELGRMNSLYVERPWHDWKPGKPPVHDHFTHEVPREIDDEHPELPDRD
Ga0132255_1025436232	3300015374	Arabidopsis Rhizosphere	MPETKDPHRERIEELGRMNTIYSERPWHDWKPGAPPKHDHFTHDTPRPVDDEHPDKPDRD
Ga0190266_101687072	3300017965	Soil	MAETKDPHRERIEELGRMNTIYSERPWHDWKPGAPPKHDHFTHETPRAVDDEHPDKPDRD
Ga0184605_101850753	3300018027	Groundwater Sediment	CGSTVGRNSVFMADSTKALRESIENLGRMNTIYGERKWDDWKPGDPPKQDKFTHDVPRKIDDEHPALPDKD
Ga0184608_101524441	3300018028	Groundwater Sediment	MAEKKDPLRERIEELGRMNTLYSEGPWVDWKPGQPPVHDHYTHDVPRAIDDELPDLPDRD
Ga0184620_102155113	3300018051	Groundwater Sediment	MADSTKALRESIENLGRMNTIYGERKWDDWKPGDPPKQDKFTHDVPRKIDDEHPALPDKD
Ga0184620_103510863	3300018051	Groundwater Sediment	MAEKKDPLRERLEELGRMNTLYSEGPWVDWKPGQPPVHDHYTHDVPRAIDDEFPDSPDRD
Ga0184626_102470303	3300018053	Groundwater Sediment	MAETKDPHRERIEELGRMNTIYSERPWHDWKPGAPPKHDHFTHDNPPAVDDEHPDKPDRD
Ga0184611_10021415	3300018067	Groundwater Sediment	MAETKDPHRERIEELGRMNTIYSENPWHDWKPGAPPKHDHFTHDNPPAVDDEHPDKPDRD
Ga0184628_103525811	3300018083	Groundwater Sediment	AMAETKDPHRERIEELGRMNTIYSERPWHDWKPGAPPKHDHFTHDNPRAVDDEHPDKPDR
Ga0184629_104953811	3300018084	Groundwater Sediment	MAETKDPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDNPVAVDDEHPDKPDRD
Ga0190265_102641082	3300018422	Soil	MAEPKDPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHYTHDNPPAVDDEHPDKPDRD
Ga0190265_104008593	3300018422	Soil	MAEPKDPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDNPPAVDDEHPDKPDRD
Ga0190265_106969902	3300018422	Soil	MAEPKNPHRERIEELGRMNTIYSERPWHDWKPGTAPKHDHYTHDNPPAVDDEHPDIPDRD
Ga0190265_119822911	3300018422	Soil	MAEPKDPHRERIEELGRMNTLYSERPWHDWKPGTPPKHDHYTHDNPPAVDDEHPDKPDRD
Ga0190275_101102852	3300018432	Soil	MAEPKNPHRERIEELGRMNTIYSERPWHDWKPGTAPKHDHFTHDNPRAVDDEHPDKPDRD
Ga0066667_105177311	3300018433	Grasslands Soil	MAEKKDPLRERIEELGRMNTIYSERAWEDWKPGKPPVHDHYTHDIPRAIDDEHPELPDRD
Ga0190270_120947102	3300018469	Soil	MAEKKDPHRERIEELGRMNTIYSERPWHDWKPGAPPKHDHFTHDNPRAVDDEHPGKPDRD
Ga0190274_125569382	3300018476	Soil	MAEPKDPHRERIEELGRMNTIYSERPWHDWKPGAPPKHDHFTHDNPRAVDDEHPDKPDRD
Ga0190274_129593442	3300018476	Soil	MAEPKNPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDNPPAVDDEHPDLPDRD
Ga0190271_100766834	3300018481	Soil	MAETKDPHRERIEELGRMNTIYSERPWHDWKPGAPPKHDHFTHDTPRAVDDEHPDKPDRD
Ga0066669_115680911	3300018482	Grasslands Soil	TRRPQVRVLQGALSFSYERQAKGMAEKKDPLRERIEELGRMNTIYSERAWEDWKPGKPPVHDHYTHDIPRAIDDEHPELPDRD
Ga0173479_102837501	3300019362	Soil	MAEKKDPLRERLEELGRMNSLYVERPWHDWRPGKPPVHDHFTHEVPRAIDDEQPELPDRD
Ga0193751_11677832	3300019888	Soil	MAEKRDPLRERIEELGRMNTIYSEGAWEDWKPGKPPVLDHYTHEVPPAIDDEHPALPDRD
Ga0193740_10653081	3300020009	Soil	EPKNPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDVPRAVDDEHPDKPDVD
Ga0193738_10648802	3300020020	Soil	MAEPKDPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDVPRAVDDEHPDKPDVD
Ga0163151_102009793	3300020057	Freshwater Microbial Mat	MAAEKDPLRKSIEDLGRMNTIYSERPWHDWKPGDPPKNDHFTHEVPRKIDDEHPDKKGID
Ga0210381_101762002	3300021078	Groundwater Sediment	MAEKKDPLRERLEELGRMNSLYVERPWADWKPGQPPVHDHFTHEVPRAIDDELPDMPDRD
Ga0247753_10536491	3300022892	Soil	MADTPKDPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDTPREVD
Ga0247793_10981712	3300023066	Soil	MADTPKDPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDTPREVDDEHPDKADR
Ga0247744_10950251	3300023073	Soil	MADTPKDPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDTPREVDDEHPDKAD
Ga0207682_101914822	3300025893	Miscanthus Rhizosphere	MDPHRRSIEELGRQNTIYSERPWHDWKPGDPPKHDHFTHEVPRQIDDEHPDKKDRD
Ga0207645_111676691	3300025907	Miscanthus Rhizosphere	CGGLCCMPDSTKALREAIENLGRMNTIYGERKWDDWKPGDPPKHDKFTHDEPRKIDDEHPALPDRD
Ga0207650_101675921	3300025925	Switchgrass Rhizosphere	IEELGRMNTIYSERPWHDWKPGAPPKHDHFTHDTPRAVDDEHPDKPDRD
Ga0207687_119455551	3300025927	Miscanthus Rhizosphere	MAEKKDPLRERIEELGRMNTLYGERAWADWKPGQPPVHDHFTHDVPRAVDDEHPKLPDRD
Ga0207701_113197392	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	LEELGRMNSLYVERPWHDWRPGKPPVHDHFTHEVPRAIDDEHPELPDRD
Ga0207706_109297581	3300025933	Corn Rhizosphere	CGGLWSMSDSTKALRESIENLGRMNTIYGERKWDDWKPGDPPKHDKFTHDEPRKIDDEHPALPDRD
Ga0207669_108888172	3300025937	Miscanthus Rhizosphere	MADSWKALRERIEQLGRMNTIYSERKWDDWKPGDPPHHDHYTHDTPRKVDDEHPALPDRD
Ga0207669_112602423	3300025937	Miscanthus Rhizosphere	MAEKKDPLRERLEELGRMNSLYVERPWHDWKPGKPPVHDHFTHEVPREIDDEHPKLPDRD
Ga0207648_115516882	3300026089	Miscanthus Rhizosphere	MAETKDPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDNPRAVDDEHPDKPDRD
Ga0209577_106834052	3300026552	Soil	FSYERQAKGMAEKKDPLRERIEELGRMNTIYSERAWEDWKPGKPPVHDHYTHDIPRAIDDEHPELPDRD
Ga0209217_11828252	3300027651	Forest Soil	RAVARPRAGYTASMAEKKDPLRERIEELGRMNTIYSEGAWEDWKPGKPPVLDHYTHEVPRAIDDEHPALPDRD
Ga0209286_13121172	3300027713	Freshwater Sediment	MADTPKDPHRERIEELGRMNTIYSERPWHDWKPGSPPKHDHFTHDTPRDVDDEHPDKPDR
Ga0209706_100184445	3300027818	Freshwater Sediment	MADTPKDPHRERIEELGRMNTIYSERPWDDWKPGSPPKHDKFTHDTPRAVDDEHPDKPDR
Ga0207428_10000019191	3300027907	Populus Rhizosphere	MAETKDPHRERIEELGRMNTIYSERPWHDWKPGAPPKHDHFTHDTPRPVDDEHPDKPDRD
Ga0209069_107062782	3300027915	Watersheds	MAEKKDPLRERLEELGRMNTMYVERAWEDWKPGKPPVLDHYMHDEPRAVDDEHPDLPDKD
Ga0209705_103653521	3300027979	Freshwater Sediment	MERMADTPKDPHRERIEELGRMNTIYSERPWEDWKPGSPPKHDKFTHDRPRAVDDEHPDKPDRD
Ga0209526_103425462	3300028047	Forest Soil	MAEKKDPLRERIEELGRMNTIYSEGAWEDWKPGKPPVHDHYTHEVPRAIDDEHPALPDRG
Ga0272482_101497821	3300028578	Soil	MAEPKDPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDNPPAVDDEHPDIPDRD
Ga0299914_107767763	3300031228	Soil	TTPPGWKTNGNQRYAYGMAERKDPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDTPRAVDDEHPDKPDLD
Ga0299913_116352241	3300031229	Soil	MAETKDPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDTPRAVDDEHPDKPDRD
Ga0310888_107491492	3300031538	Soil	MPETKDPLRERIEDLGRMNTIYSERPWHDWRPGDPPKSDKFTHDTPRQVDDEHPDKPDRD
Ga0310907_105895151	3300031847	Soil	ERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDTPREVDDEHPDKADRD
Ga0310900_104345882	3300031908	Soil	MADTKDPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDVPRAVDDEHPDKKDRD
Ga0326597_115653541	3300031965	Soil	VRYARSMADNKDPLRERIEELGRMNTIYSERPWHDWKPGHPPKHDKFTHDVPRQIDDEHPDKPGRD
Ga0310897_103645201	3300032003	Soil	MADTKDPHRERIEELGRMNTIYSERPWHDWKPGTPPKHDHFTHDVPRAVDDEHPDT
Ga0315912_116370462	3300032157	Soil	MAEPKDPHRERIEELGRMNTIYSERPWHDWKPGAPPKHDHFTHDNPRAVDDEH
Ga0307472_1025364411	3300032205	Hardwood Forest Soil	MAEKRDPLRERIEELGRMNTIYSERAWEDWKPGKPPVHDHYTHDRPRAVDDEFPELPDR
Ga0214471_108391822	3300033417	Soil	MADTKDPHRERIEELGRMNTIYSERPWHDWKPGAPPKHDHFTHENPPAVDDEHPDEPDRD
Ga0364945_0260251_39_242	3300034115	Sediment	MLSAGEAMAETKDPHRERIEELGRMNTIYSENPWHDWKPGAPPKHDHFTHDNPRAVDDEHPDKPDRD
Ga0370490_0005763_4128_4310	3300034128	Untreated Peat Soil	MAEPKDPHRERIEELGRMNTLYSERPWHDWKPGSPPRHDHFTHDNPPAVDDEHPDKPDRD
Ga0364925_0089701_2_148	3300034147	Sediment	MAETKDPHRERIEELGRMNTIYSERPWHDWKPGAPPKHDHFTHDNPRAV
Ga0364923_0011801_312_515	3300034690	Sediment	MLSAGEAMAETKDPHRERIEELGRMNTIYSENPWHDWKPGAPPKHDHFTHDNPRAVDDEQPDKPDRD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F051770

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences