Metagenome Family F051613

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051613
Family Type	Metagenome
Number of Sequences	143
Average Sequence Length	71 residues
Representative Sequence	MIEALTMPVILLALANGIRQWRAMRERQPQRDEVQQLLALLCERLHERLQQDGTPPRTVINLTAGQWHEVTKR
Number of Associated Samples	72
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	66.20 %
% of genes near scaffold ends (potentially truncated)	48.25 %
% of genes from short scaffolds (< 2000 bps)	93.01 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.448 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (48.252 % of family members)
Environment Ontology (ENVO)	Unclassified (93.007 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.049 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.64% β-sheet: 0.00% Coil/Unstructured: 38.36%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF01068	DNA_ligase_A_M	9.09
PF00816	Histone_HNS	1.40
PF13545	HTH_Crp_2	0.70
PF00829	Ribosomal_L21p	0.70
PF00589	Phage_integrase	0.70
PF13328	HD_4	0.70
PF00561	Abhydrolase_1	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	9.09
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	9.09
COG2916	DNA-binding protein H-NS	Transcription [K]	1.40
COG0261	Ribosomal protein L21	Translation, ribosomal structure and biogenesis [J]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.45 %
Unclassified	root	N/A	47.55 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.45 %
Unclassified	root	N/A	47.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.45 %
Unclassified	root	N/A	47.55 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	49.65 %
Unclassified	root	N/A	47.55 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	48.25 %
Unclassified	root	N/A	47.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.55 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	34.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.55 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	34.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.55 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	23.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.55 %
Bradyrhizobium genosp. SA-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium genosp. SA-3	0.70 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.70 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.55 %
Bradyrhizobium sp. STM 3843	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	0.70 %
Bradyrhizobium genosp. SA-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium genosp. SA-3	0.70 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005764\|Ga0066903_104547548	Not Available	739	Open in IMG/M
3300005764\|Ga0066903_108942615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	508	Open in IMG/M
3300010366\|Ga0126379_10723078	All Organisms → cellular organisms → Bacteria → Proteobacteria	1091	Open in IMG/M
3300010376\|Ga0126381_100819651	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300010376\|Ga0126381_100980941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1219	Open in IMG/M
3300012971\|Ga0126369_11086634	Not Available	889	Open in IMG/M
3300012971\|Ga0126369_13650087	Not Available	504	Open in IMG/M
3300016270\|Ga0182036_10454425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	1008	Open in IMG/M
3300016270\|Ga0182036_10818755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	759	Open in IMG/M
3300016270\|Ga0182036_11870750	Not Available	509	Open in IMG/M
3300016294\|Ga0182041_11096307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	723	Open in IMG/M
3300016294\|Ga0182041_11844445	Not Available	561	Open in IMG/M
3300016294\|Ga0182041_12164027	Not Available	519	Open in IMG/M
3300016319\|Ga0182033_10213967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1542	Open in IMG/M
3300016319\|Ga0182033_10433209	Not Available	1118	Open in IMG/M
3300016319\|Ga0182033_10921411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	775	Open in IMG/M
3300016319\|Ga0182033_10935510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	769	Open in IMG/M
3300016341\|Ga0182035_10130863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1894	Open in IMG/M
3300016341\|Ga0182035_10481083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1057	Open in IMG/M
3300016341\|Ga0182035_11863809	Not Available	545	Open in IMG/M
3300016357\|Ga0182032_10433203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1070	Open in IMG/M
3300016357\|Ga0182032_11442210	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300016357\|Ga0182032_11615361	Not Available	564	Open in IMG/M
3300016371\|Ga0182034_10203618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1532	Open in IMG/M
3300016371\|Ga0182034_10391479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1138	Open in IMG/M
3300016371\|Ga0182034_10681527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	873	Open in IMG/M
3300016371\|Ga0182034_10849133	Not Available	783	Open in IMG/M
3300016371\|Ga0182034_11511299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	588	Open in IMG/M
3300016387\|Ga0182040_11793897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	525	Open in IMG/M
3300016404\|Ga0182037_10981858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	735	Open in IMG/M
3300016422\|Ga0182039_10760231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	858	Open in IMG/M
3300016422\|Ga0182039_11131007	Not Available	706	Open in IMG/M
3300016422\|Ga0182039_11567301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	601	Open in IMG/M
3300016422\|Ga0182039_11860076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	552	Open in IMG/M
3300016422\|Ga0182039_12126770	Not Available	517	Open in IMG/M
3300016445\|Ga0182038_11608152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	584	Open in IMG/M
3300021560\|Ga0126371_10201030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2088	Open in IMG/M
3300027680\|Ga0207826_1129740	Not Available	690	Open in IMG/M
3300031544\|Ga0318534_10856154	Not Available	510	Open in IMG/M
3300031545\|Ga0318541_10069675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1842	Open in IMG/M
3300031545\|Ga0318541_10409517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	758	Open in IMG/M
3300031546\|Ga0318538_10062178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1855	Open in IMG/M
3300031549\|Ga0318571_10167901	Not Available	768	Open in IMG/M
3300031572\|Ga0318515_10485163	Not Available	660	Open in IMG/M
3300031573\|Ga0310915_10470488	Not Available	893	Open in IMG/M
3300031573\|Ga0310915_11072827	Not Available	560	Open in IMG/M
3300031640\|Ga0318555_10366361	Not Available	781	Open in IMG/M
3300031679\|Ga0318561_10328769	Not Available	837	Open in IMG/M
3300031680\|Ga0318574_10315709	Not Available	909	Open in IMG/M
3300031682\|Ga0318560_10760810	Not Available	523	Open in IMG/M
3300031719\|Ga0306917_10467794	Not Available	988	Open in IMG/M
3300031736\|Ga0318501_10797437	Not Available	523	Open in IMG/M
3300031744\|Ga0306918_11095353	Not Available	617	Open in IMG/M
3300031748\|Ga0318492_10661758	Not Available	559	Open in IMG/M
3300031754\|Ga0307475_11225292	Not Available	584	Open in IMG/M
3300031763\|Ga0318537_10187239	Not Available	771	Open in IMG/M
3300031764\|Ga0318535_10188050	Not Available	924	Open in IMG/M
3300031765\|Ga0318554_10664013	Not Available	586	Open in IMG/M
3300031765\|Ga0318554_10847164	Not Available	510	Open in IMG/M
3300031768\|Ga0318509_10120115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1433	Open in IMG/M
3300031768\|Ga0318509_10228825	Not Available	1037	Open in IMG/M
3300031771\|Ga0318546_10296308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1119	Open in IMG/M
3300031771\|Ga0318546_10657642	Not Available	737	Open in IMG/M
3300031781\|Ga0318547_10755970	Not Available	605	Open in IMG/M
3300031793\|Ga0318548_10322238	Not Available	759	Open in IMG/M
3300031795\|Ga0318557_10546110	Not Available	532	Open in IMG/M
3300031798\|Ga0318523_10085894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1529	Open in IMG/M
3300031799\|Ga0318565_10096866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1413	Open in IMG/M
3300031819\|Ga0318568_10103277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1709	Open in IMG/M
3300031821\|Ga0318567_10578075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	638	Open in IMG/M
3300031833\|Ga0310917_10218985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1276	Open in IMG/M
3300031833\|Ga0310917_10267814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1152	Open in IMG/M
3300031833\|Ga0310917_10301176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1084	Open in IMG/M
3300031833\|Ga0310917_10412873	Not Available	918	Open in IMG/M
3300031879\|Ga0306919_10153062	Not Available	1683	Open in IMG/M
3300031879\|Ga0306919_10349473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1129	Open in IMG/M
3300031879\|Ga0306919_10635348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	823	Open in IMG/M
3300031879\|Ga0306919_11064240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	617	Open in IMG/M
3300031879\|Ga0306919_11445462	Not Available	518	Open in IMG/M
3300031890\|Ga0306925_10043176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4673	Open in IMG/M
3300031890\|Ga0306925_10170969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2341	Open in IMG/M
3300031890\|Ga0306925_10908443	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300031890\|Ga0306925_11351263	Not Available	705	Open in IMG/M
3300031890\|Ga0306925_11604867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	632	Open in IMG/M
3300031890\|Ga0306925_12173317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	517	Open in IMG/M
3300031893\|Ga0318536_10389407	Not Available	704	Open in IMG/M
3300031894\|Ga0318522_10137945	Not Available	917	Open in IMG/M
3300031910\|Ga0306923_11162359	Not Available	827	Open in IMG/M
3300031910\|Ga0306923_11279977	Not Available	779	Open in IMG/M
3300031910\|Ga0306923_11416157	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300031910\|Ga0306923_12454396	Not Available	515	Open in IMG/M
3300031912\|Ga0306921_10012389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	9144	Open in IMG/M
3300031912\|Ga0306921_10561258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1323	Open in IMG/M
3300031912\|Ga0306921_11101206	Not Available	890	Open in IMG/M
3300031912\|Ga0306921_12155534	Not Available	589	Open in IMG/M
3300031912\|Ga0306921_12275039	Not Available	569	Open in IMG/M
3300031912\|Ga0306921_12707741	Not Available	509	Open in IMG/M
3300031941\|Ga0310912_10215061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1472	Open in IMG/M
3300031941\|Ga0310912_10844965	Not Available	706	Open in IMG/M
3300031941\|Ga0310912_10970500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	652	Open in IMG/M
3300031942\|Ga0310916_10339903	Not Available	1274	Open in IMG/M
3300031942\|Ga0310916_11199789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	627	Open in IMG/M
3300031945\|Ga0310913_10423897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	944	Open in IMG/M
3300031946\|Ga0310910_10030902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3640	Open in IMG/M
3300031946\|Ga0310910_10644528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	839	Open in IMG/M
3300031946\|Ga0310910_10941178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	677	Open in IMG/M
3300031947\|Ga0310909_10172533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1787	Open in IMG/M
3300031947\|Ga0310909_11084691	Not Available	651	Open in IMG/M
3300031947\|Ga0310909_11421108	Not Available	555	Open in IMG/M
3300031947\|Ga0310909_11627460	Not Available	511	Open in IMG/M
3300031954\|Ga0306926_12853363	Not Available	520	Open in IMG/M
3300031959\|Ga0318530_10368682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	595	Open in IMG/M
3300031981\|Ga0318531_10267247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	772	Open in IMG/M
3300032001\|Ga0306922_11997913	Not Available	565	Open in IMG/M
3300032009\|Ga0318563_10738404	Not Available	528	Open in IMG/M
3300032025\|Ga0318507_10055423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium genosp. SA-3	1570	Open in IMG/M
3300032035\|Ga0310911_10905712	Not Available	509	Open in IMG/M
3300032039\|Ga0318559_10261102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	802	Open in IMG/M
3300032044\|Ga0318558_10423632	Not Available	663	Open in IMG/M
3300032052\|Ga0318506_10173237	Not Available	949	Open in IMG/M
3300032052\|Ga0318506_10328075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	679	Open in IMG/M
3300032059\|Ga0318533_10149977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1649	Open in IMG/M
3300032059\|Ga0318533_10841579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	673	Open in IMG/M
3300032059\|Ga0318533_11113134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	578	Open in IMG/M
3300032065\|Ga0318513_10524457	Not Available	580	Open in IMG/M
3300032067\|Ga0318524_10446588	Not Available	676	Open in IMG/M
3300032067\|Ga0318524_10593443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	583	Open in IMG/M
3300032068\|Ga0318553_10456066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	670	Open in IMG/M
3300032076\|Ga0306924_10244598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2060	Open in IMG/M
3300032076\|Ga0306924_11095958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	868	Open in IMG/M
3300032076\|Ga0306924_12623973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	502	Open in IMG/M
3300032261\|Ga0306920_100173744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3212	Open in IMG/M
3300032261\|Ga0306920_100810978	Not Available	1373	Open in IMG/M
3300032261\|Ga0306920_101898434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	837	Open in IMG/M
3300032261\|Ga0306920_101956637	Not Available	822	Open in IMG/M
3300032261\|Ga0306920_103960198	Not Available	538	Open in IMG/M
3300032261\|Ga0306920_103971767	Not Available	537	Open in IMG/M
3300033289\|Ga0310914_10008090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7648	Open in IMG/M
3300033289\|Ga0310914_10153783	All Organisms → cellular organisms → Bacteria → Proteobacteria	2030	Open in IMG/M
3300033289\|Ga0310914_11048900	Not Available	716	Open in IMG/M
3300033289\|Ga0310914_11393062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	604	Open in IMG/M
3300033289\|Ga0310914_11396058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	603	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	97.90%
Loam	Environmental → Terrestrial → Soil → Loam	2.10%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	93.71%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.10%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	48.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	44.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.20%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.10%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066903_1045475481	3300005764	Tropical Forest Soil	MIEALTMPVLLLALANGIRQWRAMRERQPQRDEVQQLLALLCERLHERLQQDGALPRTVINLTAGQRHEVTKR*
Ga0066903_1089426151	3300005764	Tropical Forest Soil	LTMPVILLALANGIRQWRAMRERQPQRDELQQLLALLCERLQQDGTPPSTPSST*
Ga0126379_107230783	3300010366	Tropical Forest Soil	MIEALTMPVILLALANGIRQWRAMRERQSQRDEVQQLLALLCERLHERLERDGTPPRTVINLTAGQWHEVSKR*
Ga0126381_1008196513	3300010376	Tropical Forest Soil	MIEALTMPVLLLALANGIRQWRAMRERQPQRDKVQQLLALLCERLHERLERDGTPPRTVINLTAGQWHEVSKR*
Ga0126381_1009809412	3300010376	Tropical Forest Soil	MIEALTMPVILLGLANGIGQWRAMRERQPQRDEVQALLALLCEQLHDRLQQDGMPPRTVINLTAAGQWHEVTKR*
Ga0126369_110866341	3300012971	Tropical Forest Soil	MIEALTMPVILLALANGIRQWRAMRERQLPRDEVQQLLALLSEQLHERLEQDGTPPRTVINLTAAGQWHEVTKR*
Ga0126369_136500872	3300012971	Tropical Forest Soil	MIEALTMPVLLLALVDGIRQWRAMRERQPQRDEVQQLLALLCERLQQDGTPPRTVINLTAGQWQEVTKR*
Ga0182036_104544253	3300016270	Soil	IEALTMPVLRLALANGIRQWRAMRERQPQRDEVQQLLALLCERLHERQPQDGTPPRTVINLTAGQWHDFTKRRV
Ga0182036_108187551	3300016270	Soil	MIEALTIPAILLALANGIRQWRAMRERRPQRDEVQQLLALLCERLHERLQQDGTPPRTVINLTAGQWHEVTKR
Ga0182036_118707501	3300016270	Soil	LALANGIRQWRAMRERQQQRDEVQQLLALLCERLHERLERDGTPPRTVINLTAGQWHEVTQR
Ga0182041_110963072	3300016294	Soil	MIEALTIPAILLALANGIRQWRGMRERRPQRDEVQQLLALLCERLHERLERDGTPPRTVINLTAGQWQEVSKR
Ga0182041_118444451	3300016294	Soil	EALTMPVILLALANGIRQWRAMRERQPQRDEVQQLLALLCERLHERLQQDGALPRTVINLTAGQRHEVTKR
Ga0182041_121640271	3300016294	Soil	MIEALTMPVILLALANGIRQWRAMLERQPQRDEVQQLLALLCERLHERLERDGTPPRTVINLTAGQWHEVTKR
Ga0182033_102139673	3300016319	Soil	MIEALTMPVILLALANGIRQWRAMRERQQQRDEVQQLLALLCERLHERLQQDGTPPRTVINLTAAGQWHEVTKQ
Ga0182033_104332091	3300016319	Soil	LANGIRQWRAMRERQPQRDEVQQLLALLCERLHERLERDGTPPRTVINLTAGQWHEVTKR
Ga0182033_109214112	3300016319	Soil	MIEALTMPVILLALANGIRQWRAMREQQSQRDEVQQLLALLCERLHERLEQDGTPPRTVINLTVGQWHEVTKR
Ga0182033_109355102	3300016319	Soil	IEALTMPVILLALANGIRQWRAMREQQPQRDEVQQLLALLCERLHERLQQDGTPPRTVITLTAGQWHEVTKR
Ga0182035_101308631	3300016341	Soil	NEGTRPMIEALTMPVILLALANGIRQWRAMREQQSQRDEVQQLLALLCERLHERLEQDGTPPRTVINLTEGQWHEVTKR
Ga0182035_104810831	3300016341	Soil	MIEALTMPVILLALANGIRQWRAMRERQPQRDEVQQLLALLCERLHERLQQDGT
Ga0182035_118638091	3300016341	Soil	MIEALTMPVLRLALANGIRQWRAMRERQPQRDEVQQLLALLCERLHERLQQDGTPPRTVISLTAGQWHDFTKRRV
Ga0182032_104332031	3300016357	Soil	MIEALTMLAILLALAISGAVALHWIEGQRAVRVRQPQPDEVQALLALLCEQLHERLQQEGTPPRTVINLSAGQWHEVTKR
Ga0182032_114422101	3300016357	Soil	PIPHPNGTEGTRPMIEALTMPVLRLALANGIRQWRAMRERQPQRDEVQQLLALLCERLHERQPQDGTPPRTVINLTAGQWHEVSKR
Ga0182032_116153611	3300016357	Soil	MIEALTMPAILLALANGIRQWRAMRERQPQRDEVQLLALLCERLHERLEQGGPPPRTVIN
Ga0182034_102036181	3300016371	Soil	MIEALTMPAILLALLCERLHERLERDGTPPRTVINLTAGQWHEVTKR
Ga0182034_103914794	3300016371	Soil	ALANGIRQWRAMRERQPQRDEVQQLLALLCERLQQDGTPPRTVITLTAGQWHEVTKR
Ga0182034_106815273	3300016371	Soil	MIEALTIPAILLALAISGAVALHWIEGRRAVRKRQPQPDEVHSLLALLCEQLHERLQQDGTPPRTVINLTAAGQWHEVTKQ
Ga0182034_108491332	3300016371	Soil	MIEALTMPVILLALANGIRQWRAMREQQPQRDEVQQLLALLCERLHERLQQDGTPPRTVI
Ga0182034_115112992	3300016371	Soil	MIEALAMPVLLLALANGIRQWRAMRERQPQRDEVQLLALLCERLHERLEQGGPPPRTVINLTAGEWHEVTKQ
Ga0182040_117938971	3300016387	Soil	PARRLPIPHPNGTEGTRPMIEALTMPVILLGLANGIRQWRAMRERQQQRDEVQQLLALLCERLHERLQQDGTPPRTVISLTAGQWHEVTKR
Ga0182037_109818583	3300016404	Soil	SLLALAISGAVALHWIEGRRAVRERQPQPDEVQALLALLCEQLHERLQQEGTPPRTVINLTAAGQWHEVTKR
Ga0182039_107602312	3300016422	Soil	MIEALTMPVLLLALANGIRQWRAMRERQPQRDEVQQLLALLCERLHERLQQDGTPPRTVINLTAGQRHEVTKR
Ga0182039_111310071	3300016422	Soil	GTRPMIEALTMPVLLLALANGIRQWRAMRERQPQRDEVQQLLALLCERLHERQPQDGTPPRTVINLTAGQWHDFTKRRV
Ga0182039_115673011	3300016422	Soil	MIEALTMLAILLALAISGAVALHWIEGRRAVRVRQPQPDEVQALLALLCEQLHERLQQEGTPPRTVINLTAAGQWHEVTKR
Ga0182039_118600761	3300016422	Soil	MPVLLLALANGIRQWRAMRERQPQRDEVQLLALLCERLHERLEQGGPPPRTVINLTAGQWHEITKR
Ga0182039_121267701	3300016422	Soil	MIEALTMPAILLALAISGGLALYGIVRQWRAERDRQPQPDEAQALLALLCEQLHERLQQDGTPPRTVINLTAGQWHEVTKR
Ga0182038_116081522	3300016445	Soil	MIEALTMPVILLALANGIRQWRAMPERQPQRDEVQQLLALLCERLQERLHERLQQDGTPPRTVINLTAGQWHEVTKR
Ga0126371_102010302	3300021560	Tropical Forest Soil	MIEALTMPVILLALANGIRQWRAMRERESQRDEVQQLLALLCERLHERLERDGTPPRTVINLTAGQWHEVSKR
Ga0207826_11297401	3300027680	Tropical Forest Soil	MIESLTIPAILLALANGIRQWRAMRERQPQRDEVQQLLALLCERLHERLQQDGTPPRTVI
Ga0318534_108561541	3300031544	Soil	RPMIEALTIPAILLALAISGAVALHWIEGRRTVRERQPQPDEVQALLAALCEQLHDRLQQDGTPPRTVINLTAGQWHEVTKR
Ga0318541_100696751	3300031545	Soil	EALTMPVILLALANGIRQWRALRERQSQRDEVQQLLALLCERLHERLQQDGTPPRTVINLTEGQWHEVTKR
Ga0318541_104095171	3300031545	Soil	MIEALTIPAILLALANGIRQWRAMRERRPQRDEVQQLLALLCERLHERLERDGTPPRTVINLTAGQWQEVSKR
Ga0318538_100621782	3300031546	Soil	MIEALTMPVILLALANGIRQWRAMREQQSQRDEVQQLLALLCERLHERLEQDGTPPRTVINLTEGQWHEVTKR
Ga0318571_101679012	3300031549	Soil	MIEALTMPVILLALANGIRQWRAMRERQSQRVEVQQLLALLCERLHERLQQDGTPPRTVINLTAGQWHEVTKR
Ga0318515_104851631	3300031572	Soil	MIEALTMPVILLALANGIRQWRALRERQSQRDEVQQLLALLCERLHERLRQDGTPPR
Ga0310915_104704882	3300031573	Soil	MIEALTMPAILLALAISGAVALHWIEGRRTVRERQPQPDEVQALLAALCEQLHDRLQQDGTPPRTVINLTAGQWHEVTKR
Ga0310915_110728271	3300031573	Soil	MIEALTMPVLRLALANGIRQWRAMRERQPQRDEVQQLLALLCERLHERQPQDGTPPRTVINLTAGQWHDFTKRRV
Ga0318555_103663612	3300031640	Soil	MIEALTMPVILLALANGIRQWRAMRERQPQRDEVQQLLALLCERLHERLQQDGTPPRTVINLTAGQWHEVTKR
Ga0318561_103287691	3300031679	Soil	ALANGIRQWRAMREQQSQRDEVQQLLALLCERLHERLQQDGTPPRTVINLTAGQWHEVTK
Ga0318574_103157092	3300031680	Soil	MIEALTMPVILLALANGIRQWRAMREQQPQRDEVQQLLALLCERLHERLEQDGTPPRTVINLTEGQWHEVTKR
Ga0318560_107608102	3300031682	Soil	MIEALTMRVILLALANGIRQWRAMRERQQQRDEVQQLLALLCERLHERLQQDGTPPRTVISLTAGQWHEVTKR
Ga0306917_104677941	3300031719	Soil	MIEALTMPVILLALANGIRQWRAMREQQPQRDEVQQLLALLCERLHERLQQDGTPPRTVITLTAGQWHE
Ga0318501_107974372	3300031736	Soil	MPAILLALAISGAVALHWIEGRRTVRERQPQPDEVQALLAALCEQLHDRLQQDGTPPRTVINLTAGQWHEVTKR
Ga0306918_110953531	3300031744	Soil	MIEALTMPAILLALAISGAVALHLIEGRRTVRERQPQPDEVQQLLALLCEQLHERLQQDGTPPRTVINLTAGQWHEVTKR
Ga0318492_106617581	3300031748	Soil	MPAILLALANGIRQWRAMRERQPQRDEVQQLLALLCERLHERLQQDGTPPRTVINLTEGQWHEVTKR
Ga0307475_112252921	3300031754	Hardwood Forest Soil	MIEALTMPVILLALANGIRQWRATRERQPQRDEVQQLLALLCERLHERLQQDGAPPRTVINLTAGQWHE
Ga0318537_101872391	3300031763	Soil	MIEALTMPVILLALANGIRQWRAMRERQPQRDEVQQLLALLCERLHERLERDGTPPRTVINLTAGQWHEVTKQ
Ga0318535_101880503	3300031764	Soil	MIEALTMPVILLALANGIRQWRAMRERQQQRDEVQQLLALLCERLHERLQQDGTPPRTVINLTAGQWHEVTKR
Ga0318554_106640132	3300031765	Soil	MPAILLALAISGAVALHWIEGRRTVRERQPQPDEVQALLAALCEQLHDRLQQDGTPPRTVINLTAGQW
Ga0318554_108471642	3300031765	Soil	MIEALTIPAILLALANGIRQWRAMRERRPQRDEVQQLLALLCERLHERLERDGTPPRTVINLTAGQWQE
Ga0318509_101201151	3300031768	Soil	MIAALTMPVLLLALANGIRQWRAMRERQPQRDELQQLLALLCERLHERLQQDGALPRTVINLTAGQRHEVTKR
Ga0318509_102288251	3300031768	Soil	MIEALTMPVILLALANGIRQWRAMRERQPKRDEVQQLLALLCERLHERLQQDGTPPRTVINLTEGQWHEVTKR
Ga0318546_102963082	3300031771	Soil	MIEALTMPVLLLALANGIRQWRAMREQQSQRDEVQQLLALLCERLHERLEQDGTPPRTVINLTEGQWHEVTKR
Ga0318546_106576421	3300031771	Soil	MIEALTMPVILLALANGIRQWRAMRERQSQRDEVQQLLALLCDRLHERLEQDGTPPRTVINLTAGQWHEVSKP
Ga0318547_107559702	3300031781	Soil	IEALTMPVILLALANGIRQWRAMREQQSQRDEVQQLLALLCERLHERLEQDGTPPRTVINLTEGQWHEVTKR
Ga0318548_103222382	3300031793	Soil	MIEALTMPVILLALANGIRQWRAMREQQPQRDEVQQLLALLCERLHERLQQDGTPPRTVINLTEGQWHDVTKR
Ga0318557_105461101	3300031795	Soil	LTMPVILLALANGIRQWRAMRERQPQRDEVQQLLALLCEQLHERLQQDGTPPRTVINLTAGQWHEVTKR
Ga0318523_100858943	3300031798	Soil	MPVILLALANGIRQWRAMREQQSQRDEVQQLLALLCERLHERLEQDGTPPRTVINLTEGQWHEVTKR
Ga0318565_100968661	3300031799	Soil	RRASNPTNGNEGTRPMIEALTMPVILLALANGIRQWRAMREQQSQRDEVQQLLALLCERLHERLEQDGTPPRTVINLTEGQWHEVTKR
Ga0318568_101032771	3300031819	Soil	MIEALTMPVILLALANGIRQWRALRERQSQRDEVQQLLALLCERLHERLQQDGTPPRTVINLTEGQWHEVTKR
Ga0318567_105780751	3300031821	Soil	MIEALTIPAILLALANGIRQWRAMRERRPQRDEVQQLLALLCERLERDGTPPRTVINLTAGQWQEVSKR
Ga0310917_102189851	3300031833	Soil	MIEALTMPVILLALANGIRQWRAMREQQPQRDEVQQLLALLCERLHERLQQDGTPPRTVITLTAGQWHEVTKR
Ga0310917_102678141	3300031833	Soil	MIEALTMPVILLALANGIRQWRAMRERQLPRDEVQQLLALLCEQLHERLEQDGTPPRTVINLTARQWHEVTKR
Ga0310917_103011762	3300031833	Soil	MIEALTIPAILLALAISGAVALHWIEGRRAVRERQPQPDEVQALLALLCEQLHDRLQQDGMPPRTVINLTAGQWQEVSKR
Ga0310917_104128732	3300031833	Soil	MIEALTMPAILLALANGIRQWRAMREHEPQRDEVQQLLALLCDRLHERLEQDGTPPRTVINLTAGQWHEVTKR
Ga0306919_101530621	3300031879	Soil	LRRVTALTRRASPNPTNGTEGTRPMIEALTMPVILLALANGIRQWRAMRERQPKRDEVQQLLALLCERLHERLQQDGTPPRTVINLTAGQWHEVTKR
Ga0306919_103494732	3300031879	Soil	MIEALTMPVILLALANGIRQWRAMHERQPQRDEVQQLLALLCERLQQEGTPPRTVINLSAGQWHEVTKR
Ga0306919_106353482	3300031879	Soil	MIEALAMPVLLLALANGIRQWRAMRERQPQRDEVQLLALLCERLHERLEQGGPPPRTVINLTAGQWHEITKR
Ga0306919_110642402	3300031879	Soil	MIEALTMPVILLALANGIRQWRAMRERQQQRDEVQQLLALLCERLHERLQQDGTPPRTVISLTAGQWHEVTKR
Ga0306919_114454621	3300031879	Soil	MIEALTMPAILLALANGIRQWRAMRERQPQRDEVQQLLALLCERLHERLERDGTPPRTVINLTAGQWHEVTKR
Ga0306925_100431761	3300031890	Soil	RAAALTRRASNPTNGNEGTRPMIEALTMPVILLALANGIRQWRAMREQQSQRDEVQQLLALLCERLHERLEQDGTPPRTVINLTEGQWHEVTKR
Ga0306925_101709694	3300031890	Soil	MIEALTIPAILLALAISGAVALHWIEGRRAVRKRQPQPDEVHSLLALLCEQLHERLQQDDTPPRTVINLTAGQWREVSKR
Ga0306925_109084432	3300031890	Soil	MLEALTMPVILLALANGIRQWRAMRERQSQRDEVQQLLALLCERLHERLERDGTPPRTVINLTAGQWHEVSKR
Ga0306925_113512632	3300031890	Soil	LALANGIRQWRAMRERQPQRDEVQQLLALLCERLHERLERDGTPPRTVINLTAGQWHEVTKR
Ga0306925_116048671	3300031890	Soil	MIEALTMPAVLLALAISGALALYGIIRQWRAERDRQPQPDEAQALLALLCEQLHERLQQDDTPPRTVINLTAGQWHEVTKR
Ga0306925_121733171	3300031890	Soil	MIEALTIPAILLALANGIRQWRAMRERQPQRDEVQQLLALLCERLHERLQQDGAPPRTVINLTAGQWHEVTKQ
Ga0318536_103894071	3300031893	Soil	MIEALTMPAILLALANGIRQWRAMRERQPQRDEVQQLLALLCERLHERLQQDGTPPRTVINLTAGQWHEVTKR
Ga0318522_101379452	3300031894	Soil	MIEALTMPVILLALANGIRQWRALRERQSQRDEVQQLLALLCERLHERLQQDGTPPRTVINLTAGQWHEVTKR
Ga0306923_111623593	3300031910	Soil	MIEALTMPVILLALANGIRQWRAMHERQPQRDEVQQLLALLCERLHERLQQDGTPPRTVINLS
Ga0306923_112799771	3300031910	Soil	PAILLALAISGAVALHWIEGRRTVRERQPQPDEVQALLAALCEQLHDRLQQDGTPPRTVINLTAGQWHEVTKR
Ga0306923_114161571	3300031910	Soil	MIEALTMPVILLALANGIRQWRAMRERQPKRDEVQQLLALLCERLHERLQQDGTPPRTVINLTAGQWHEVTKR
Ga0306923_124543961	3300031910	Soil	MIEALTMPVLLLALANGIRQWRAMREQQSQRDEVQQLLALLCERLHERLQQDGTTPRTVINLTAGQWHEVAKQPTTSETK
Ga0306921_1001238914	3300031912	Soil	MIEALTMPVILLALANGIRQWRAMHERQPQRDEVQQLLALLCERLHERLQQDGTPPRTVINLSAGQWHEVTKR
Ga0306921_105612583	3300031912	Soil	MIEALTIPAILLALANGIRQWRAMRERRPQRDEVQQLLALLCERLPERLERDGAPPRTVINLTAGQWQEVSKR
Ga0306921_111012062	3300031912	Soil	IEALTMPVLLLALANGIRQWRAMRERQPQRDEVQQLLALLCERLHERQPQDGTPPRTVINLTAGQWHDFTKRRV
Ga0306921_121555342	3300031912	Soil	MIEALTMPVILLALANGIRQWRAMRERQLPRDEVQQLLALLCERLHERLEQDGTPPRTVINLTAGQWHE
Ga0306921_122750391	3300031912	Soil	LALANGIRQWRAMRERQPQRDEVQQLLALLCERLHERLQQDGSLPRTVINLTAGQRHEVTKR
Ga0306921_127077412	3300031912	Soil	MIEALTMPVILLALANGIRQWRAMREQQSQRDEVQQLLALLCERLHERLEQDGTPPRTVINLTEGQWHEVTKQ
Ga0310912_102150611	3300031941	Soil	MIEALTMPVILLALANGIRQWRAMHERQPQRDEVQQLLALLCERLHERLQQEGTPPRTVINLSAGQWHEVTKR
Ga0310912_108449652	3300031941	Soil	ALANGIRQWRAMRERPSQRDEVQQLLALLCERLHERLEQDGTPPRTVINLTANQWHEVNK
Ga0310912_109705001	3300031941	Soil	LTIPAILLALANGIRQWRAMRERRPQRDEVQQLLALLCERLHERLERDGTPPRTVINLTAGQWQEVSKR
Ga0310916_103399031	3300031942	Soil	MIEALTMPVILLALANGIRQWRAMRERQPQRDEVQQLLALLCERLQQDGTPPALTCR
Ga0310916_111997891	3300031942	Soil	NGTEGTRPMIEALTMPVILLALANGIRQWRAMRERQQQRDEVQQLLALLCERLHERLQQDGTPPRTVISLTAGQWHEVTKR
Ga0310913_104238974	3300031945	Soil	ALTMPVILLALANGIRQWRAMHERQPQRDEVQQLLALLCERLHERLQQEGTPPRTVINLSAGQWHEVTKR
Ga0310910_100309029	3300031946	Soil	ASNPTNGNEGTRPMIEALTMPVILLALANGIRQWRAMREQQSQRDEVQQLLALLCERLHERLEQDGTPPRTVINLTEGQWHEVTKR
Ga0310910_106445283	3300031946	Soil	MIEALAMPVLLLALANGIRQWRAMRERQPQRDEVQLLALLCERLHERLEQGGPPPRTVINLTAGQWHE
Ga0310910_109411783	3300031946	Soil	MIEALTIPAILLALAISGAVALHWIEGRRAVRERQPQPDEVQALLALLCEQLHERLQQEGTPPRTVINLTAAGQWHEVTKR
Ga0310909_101725335	3300031947	Soil	MIEALTMPVILLALANGIRQWRAMRERQPQRDEVQQLLALLCERLHERLQQDGTPPRTVITLTAGQWHEVTKR
Ga0310909_110846912	3300031947	Soil	MIEALNMPVILLALANGIRQWRAMREREPQRDEVQQLLALLCERLQQDGTPPRTVINLTVGQWHEVTKR
Ga0310909_114211081	3300031947	Soil	MIEALTMPAILLALAISGAVALHWIEGRRTVRERQPQPDEVQQLLALLCEQLHERLQQDGTPPRTVINLTAGQWREVTKR
Ga0310909_116274601	3300031947	Soil	MIEALTMPVILLALANGIRQWRAMHERQPQRDEVQQLLALLCERLHERLQQEGT
Ga0306926_128533631	3300031954	Soil	PNETEGTRPMIEALAMPVLLLALANGIRQWRAMRERQPQRDEVQLLALLCERLHERLEQGGPPPRTVINLTAGQWHEITKR
Ga0318530_103686821	3300031959	Soil	ALTRRASPNPTNGTEGTRPMIEVLTMPVILLALANGIRQWRAMRERQPQRDEVQQLLALLCERLHERLQQDGTPPRTVINLTAGQWHEVTKR
Ga0318531_102672472	3300031981	Soil	TMPVILLALANGIRQWRAMRERQPQRDEVQQLLALLCERLHERLQQDGTPPRTVINLTAGQWHEVTKR
Ga0306922_119979132	3300032001	Soil	MIEALTMPVLLLALANGIRQWRAMRERQPQRDELQQLLALLCERLHERLQQDGALPRT
Ga0318563_107384041	3300032009	Soil	ANGIRQWRAMREQQSQRDEVQQLLALLCERLHERLEQDGTPPRTVINLTEGQWHEVTKR
Ga0318507_100554233	3300032025	Soil	TMPVILLALANGIRQWRAMREQQSQRDEVQQLLALLCERLHERLEQDGTPPRTVINLTEGQWHEVTKR
Ga0310911_109057121	3300032035	Soil	RTRPMIEALTIPAILLALAISGAVALHWIEGRRAVRERQPQPDEVQALLALLCEQLHERLQQDGTPPRTVINLTAGQWHEVTKR
Ga0318559_102611022	3300032039	Soil	MIEALTMPVILLALANGIRRWRAMRERQPQRDEVQQLLALLCERLHERLQQDGTPPSTVINLTPGQWHEVTKR
Ga0318558_104236322	3300032044	Soil	MIEALTIPAILLALANGIRQWRAMRERRPQRDEVQQLLALLCERLHERLERDGTPPRTVINLTAGQW
Ga0318506_101732373	3300032052	Soil	MIEALTMPVILLALANGIRQWRALRERQSQRDEVQQLLALLCERLHERLQQDGTPPRTVINLTAGQW
Ga0318506_103280752	3300032052	Soil	RPMIEALTIPAILLALAISGAVALHWIEGRRAVRKRQPQPDEVHSLLALLCEQLHERLQQDDTPPRTVINLTAGQWREVSKR
Ga0318533_101499773	3300032059	Soil	MIEALTMPVILLALANGIRQWRAMREQQPQRDEVQQLLALLCERLHERLQQDGTPPRTVINLTAGQWHEVTKR
Ga0318533_108415791	3300032059	Soil	RRASQSHQRNRRTRPMIEALTIPAILLALANGIRQWRAMRERRPQRDEVQQLLALLCERLHERLERDGTPPRTVINLTAGQWQEVSKR
Ga0318533_111131343	3300032059	Soil	TMPVILLALANGIRQWRAMHERQPQRDEVQQLLALLCERLQQEGTPPRTVINLSAGQWHEVTKR
Ga0318513_105244571	3300032065	Soil	MIEALTMRVILLALANGIRQWRAMRERQQQRDEVQQLLALLCERLHEQLQQDGTPPRTVISLTAGQWHEVTKR
Ga0318524_104465882	3300032067	Soil	MIEALTMPVILLALANGIRQWRAMRERQPQRDEVQQLLALLCERLHERLQQDGTPPRTVI
Ga0318524_105934431	3300032067	Soil	LANGIRQWRAMRERQPQRDEVQQLLALLCERLHERLQQDGTPPRTVINLTAGQWHEVTKR
Ga0318553_104560662	3300032068	Soil	MIEALTMPVILLALANGIRQWRAMREQQSQRDEVQQLLALLCERLHERLQQDGTPPRTVITLTAGQWHEVTKR
Ga0306924_102445984	3300032076	Soil	MIEALTMPVILLALANGIRQWRAMRELLCERLHERLQQDGTPPRTVITLTAGQWHEVTKR
Ga0306924_110959581	3300032076	Soil	LTMPVILLALANGIRRWRAMRERQPQRDEVQQLLALLCERLHERLQQDGTPPSTVINLTPGQWHEVTKR
Ga0306924_126239731	3300032076	Soil	MIEALTIPASLLALAISGAVALHWIEGRRAVRERQPQPDEVQALLALLCEQLHERLQQEGTPPRTVINLTAAGQWHEVTKR
Ga0306920_1001737441	3300032261	Soil	LANGIRQWRAMREQQPQRDEVQQLLALLCERLHERLQQDGTPPRTVITLTAGQWHEVTKR
Ga0306920_1008109781	3300032261	Soil	MIEALTLPAILLALAISGALALYGIIRQWRAERDRRPQPDEAQALLALLCEQLHEGLQRDGTPPRTVINLTAGQWHEVTKR
Ga0306920_1018755823	3300032261	Soil	MIEALTMPVILLALANGIRQWRAMREQQSQRDEVQQLLALLCERLHERLEQDG
Ga0306920_1018984342	3300032261	Soil	MIEALTMLAILLALAISGAVALHWIEGQRAVRVRQPQPDEVQALLALLCEQLHERLQQEGTPPRTVINLTAAGQWHEVTKR
Ga0306920_1019566371	3300032261	Soil	MIEALTMPVLLLALANGIRQWRAMRERQPQRDEVQQLLALLCERLHERLQQDGALPAHRHQP
Ga0306920_1039601981	3300032261	Soil	LANGIRQWRAMREQQSQRDEVQQLLALLCERLHERLQQDGTTPRTVINLTAGQWHEVAKQPTTSETK
Ga0306920_1039717671	3300032261	Soil	MIEALTMPVILLALANGIRQWRAMREQQSQRDEVQQLLTLLCERLHERLEQDGTPPRTVINLTEGQW
Ga0310914_100080901	3300033289	Soil	MIEALTMPVILLALANGIRQWRALRERQSQRDEVQQLLALLCERLHERLRQDGTPPRTVINLTEGQW
Ga0310914_101537831	3300033289	Soil	MIEALTIPAILLALAISGAVALHWIEGRRAVRERQPQPDEVQALLALLCEQLHERLQRDGTPPRPVINLTAARQWHEVTKR
Ga0310914_110489001	3300033289	Soil	MIEALTMPVLRLALANGIRQWRAMRERQPQRDEVQQLLALLCERLHERQPQDGTPPRTVINLTAGQWYDFTKRRV
Ga0310914_113930621	3300033289	Soil	IPAILLALAISGAVALHWIEGRRAVRERQPQPDEVQALLALLCEQLHDRLQQDGMPPRTVINLTAGQWQEVSKR
Ga0310914_113960581	3300033289	Soil	ARQIPNSNGTEGTRPMIEALTMPVILLALANGIRQWRAMRERQQQRDEVQQLLALLCERLHERLQQDGTPPRTVISLTAGQWHEVTKR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F051613

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences