NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F051566

Metagenome / Metatranscriptome Family F051566

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F051566
Family Type Metagenome / Metatranscriptome
Number of Sequences 144
Average Sequence Length 74 residues
Representative Sequence MAKIYESPDGGETVYERDTVTGERICIEKPVHPDWYIDPYDFDLITEMAKDGNKTLQNLLKEVKLVYNLSIEEE
Number of Associated Samples 101
Number of Associated Scaffolds 144

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 45.83 %
% of genes near scaffold ends (potentially truncated) 34.72 %
% of genes from short scaffolds (< 2000 bps) 55.56 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (46.528 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh
(38.194 % of family members)
Environment Ontology (ENVO) Unclassified
(38.194 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(86.111 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 29.41%    β-sheet: 13.73%    Coil/Unstructured: 56.86%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 144 Family Scaffolds
PF07883Cupin_2 18.75
PF137592OG-FeII_Oxy_5 6.94
PF01258zf-dskA_traR 4.86
PF12171zf-C2H2_jaz 4.17
PF04851ResIII 2.78
PF00984UDPG_MGDP_dh 2.08
PF03721UDPG_MGDP_dh_N 2.08
PF07733DNA_pol3_alpha 1.39
PF00271Helicase_C 1.39
PF08722Tn7_TnsA-like_N 0.69
PF01370Epimerase 0.69
PF02657SufE 0.69
PF06745ATPase 0.69
PF02622DUF179 0.69
PF00154RecA 0.69
PF03796DnaB_C 0.69
PF04820Trp_halogenase 0.69
PF13578Methyltransf_24 0.69
PF13489Methyltransf_23 0.69
PF01106NifU 0.69

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 144 Family Scaffolds
COG1734RNA polymerase-binding transcription factor DksATranscription [K] 4.86
COG0677UDP-N-acetyl-D-mannosaminuronate dehydrogenaseCell wall/membrane/envelope biogenesis [M] 4.17
COG1004UDP-glucose 6-dehydrogenaseCell wall/membrane/envelope biogenesis [M] 4.17
COG0240Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 2.08
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 2.08
COG1893Ketopantoate reductaseCoenzyme transport and metabolism [H] 2.08
COG0587DNA polymerase III, alpha subunitReplication, recombination and repair [L] 1.39
COG2176DNA polymerase III, alpha subunit (gram-positive type)Replication, recombination and repair [L] 1.39
COG0305Replicative DNA helicaseReplication, recombination and repair [L] 0.69
COG0468RecA/RadA recombinaseReplication, recombination and repair [L] 0.69
COG0694Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domainPosttranslational modification, protein turnover, chaperones [O] 0.69
COG1066DNA repair protein RadA/Sms, contains AAA+ ATPase domainReplication, recombination and repair [L] 0.69
COG1678Putative transcriptional regulator, AlgH/UPF0301 familyTranscription [K] 0.69
COG2166Sulfur transfer protein SufE, Fe-S cluster assemblyPosttranslational modification, protein turnover, chaperones [O] 0.69


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms53.47 %
UnclassifiedrootN/A46.53 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001419|JGI11705J14877_10015802Not Available3121Open in IMG/M
3300003216|JGI26079J46598_1007456All Organisms → Viruses → Predicted Viral3522Open in IMG/M
3300003580|JGI26260J51721_1047687All Organisms → cellular organisms → Bacteria681Open in IMG/M
3300004097|Ga0055584_100023247Not Available6084Open in IMG/M
3300005512|Ga0074648_1007401Not Available7904Open in IMG/M
3300005512|Ga0074648_1018297Not Available4058Open in IMG/M
3300005512|Ga0074648_1056520Not Available1648Open in IMG/M
3300005512|Ga0074648_1062883All Organisms → Viruses → Predicted Viral1510Open in IMG/M
3300005611|Ga0074647_1006636All Organisms → Viruses → Predicted Viral2534Open in IMG/M
3300006025|Ga0075474_10001432Not Available9950Open in IMG/M
3300006357|Ga0075502_1623662All Organisms → cellular organisms → Bacteria → Proteobacteria1792Open in IMG/M
3300006637|Ga0075461_10106141Not Available881Open in IMG/M
3300006752|Ga0098048_1000063Not Available51189Open in IMG/M
3300006793|Ga0098055_1000144Not Available47790Open in IMG/M
3300006870|Ga0075479_10272853Not Available667Open in IMG/M
3300007236|Ga0075463_10243875All Organisms → cellular organisms → Bacteria → Proteobacteria578Open in IMG/M
3300007538|Ga0099851_1004103Not Available6121Open in IMG/M
3300007538|Ga0099851_1032231All Organisms → Viruses → Predicted Viral2092Open in IMG/M
3300007539|Ga0099849_1037779All Organisms → Viruses → Predicted Viral2046Open in IMG/M
3300007539|Ga0099849_1072470All Organisms → cellular organisms → Bacteria1404Open in IMG/M
3300007542|Ga0099846_1012374All Organisms → Viruses → Predicted Viral3367Open in IMG/M
3300007554|Ga0102820_1062367Not Available899Open in IMG/M
3300007623|Ga0102948_1024006All Organisms → Viruses → Predicted Viral2040Open in IMG/M
3300007725|Ga0102951_1030506All Organisms → Viruses → Predicted Viral1658Open in IMG/M
3300009000|Ga0102960_1000147Not Available25004Open in IMG/M
3300009000|Ga0102960_1002350Not Available7276Open in IMG/M
3300009000|Ga0102960_1015101All Organisms → Viruses → Predicted Viral2906Open in IMG/M
3300009000|Ga0102960_1055709All Organisms → Viruses → Predicted Viral1454Open in IMG/M
3300009000|Ga0102960_1134944Not Available892Open in IMG/M
3300009001|Ga0102963_1242971Not Available713Open in IMG/M
3300009027|Ga0102957_1042251All Organisms → Viruses → Predicted Viral1563Open in IMG/M
3300010296|Ga0129348_1116380All Organisms → cellular organisms → Bacteria → Proteobacteria936Open in IMG/M
3300010297|Ga0129345_1082249All Organisms → Viruses → Predicted Viral1205Open in IMG/M
3300010299|Ga0129342_1057962All Organisms → Viruses → Predicted Viral1505Open in IMG/M
3300010299|Ga0129342_1205751Not Available698Open in IMG/M
3300010300|Ga0129351_1081075All Organisms → Viruses → Predicted Viral1311Open in IMG/M
3300012936|Ga0163109_11120894All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage574Open in IMG/M
3300012936|Ga0163109_11328673All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage524Open in IMG/M
3300012954|Ga0163111_10001286Not Available15365Open in IMG/M
3300013195|Ga0116815_1010913All Organisms → cellular organisms → Bacteria1098Open in IMG/M
3300016747|Ga0182078_10264872All Organisms → cellular organisms → Bacteria → Proteobacteria1727Open in IMG/M
3300016762|Ga0182084_1577574All Organisms → cellular organisms → Bacteria → Proteobacteria1684Open in IMG/M
3300017706|Ga0181377_1015686All Organisms → Viruses → Predicted Viral1724Open in IMG/M
3300017732|Ga0181415_1029104All Organisms → cellular organisms → Bacteria1274Open in IMG/M
3300017744|Ga0181397_1178753All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300017753|Ga0181407_1092260Not Available766Open in IMG/M
3300017818|Ga0181565_10189197All Organisms → Viruses → Predicted Viral1420Open in IMG/M
3300017824|Ga0181552_10002745Not Available12758Open in IMG/M
3300017949|Ga0181584_10003877Not Available11369Open in IMG/M
3300017949|Ga0181584_10035226All Organisms → Viruses → Predicted Viral3596Open in IMG/M
3300017949|Ga0181584_10075905Not Available2328Open in IMG/M
3300017949|Ga0181584_10098156All Organisms → cellular organisms → Bacteria → Proteobacteria2006Open in IMG/M
3300017949|Ga0181584_10419128Not Available835Open in IMG/M
3300017949|Ga0181584_10488027Not Available759Open in IMG/M
3300017950|Ga0181607_10517178Not Available636Open in IMG/M
3300017951|Ga0181577_10351711All Organisms → cellular organisms → Bacteria946Open in IMG/M
3300017952|Ga0181583_10004756Not Available9957Open in IMG/M
3300017952|Ga0181583_10114385All Organisms → Viruses → Predicted Viral1832Open in IMG/M
3300017952|Ga0181583_10230452All Organisms → Viruses → Predicted Viral1203Open in IMG/M
3300017952|Ga0181583_10292190All Organisms → Viruses → Predicted Viral1039Open in IMG/M
3300017952|Ga0181583_10342726All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium941Open in IMG/M
3300017956|Ga0181580_10038308All Organisms → Viruses → Predicted Viral3675Open in IMG/M
3300017957|Ga0181571_10295174All Organisms → cellular organisms → Bacteria → Proteobacteria1024Open in IMG/M
3300017957|Ga0181571_10640766Not Available639Open in IMG/M
3300017957|Ga0181571_10774046Not Available570Open in IMG/M
3300017958|Ga0181582_10001141Not Available20365Open in IMG/M
3300017958|Ga0181582_10039225All Organisms → Viruses → Predicted Viral3653Open in IMG/M
3300017958|Ga0181582_10200581Not Available1358Open in IMG/M
3300017958|Ga0181582_10782649Not Available569Open in IMG/M
3300017962|Ga0181581_10006372Not Available9202Open in IMG/M
3300017962|Ga0181581_10501162All Organisms → cellular organisms → Bacteria → Proteobacteria750Open in IMG/M
3300017964|Ga0181589_10025507All Organisms → Viruses → Predicted Viral4568Open in IMG/M
3300017967|Ga0181590_10049190All Organisms → Viruses → Predicted Viral3369Open in IMG/M
3300017968|Ga0181587_10034470All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae3817Open in IMG/M
3300017986|Ga0181569_10731002Not Available653Open in IMG/M
3300017992|Ga0180435_11652607Not Available557Open in IMG/M
3300018049|Ga0181572_10356213Not Available921Open in IMG/M
3300018049|Ga0181572_10886514Not Available528Open in IMG/M
3300018416|Ga0181553_10011026Not Available7156Open in IMG/M
3300018421|Ga0181592_10311148All Organisms → Viruses → Predicted Viral1136Open in IMG/M
3300018423|Ga0181593_10960613Not Available588Open in IMG/M
3300018424|Ga0181591_11018325All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300018428|Ga0181568_10551326All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium913Open in IMG/M
3300019274|Ga0182073_1115717Not Available503Open in IMG/M
3300020165|Ga0206125_10143107All Organisms → cellular organisms → Bacteria968Open in IMG/M
3300020379|Ga0211652_10124987Not Available779Open in IMG/M
3300020438|Ga0211576_10006032Not Available8078Open in IMG/M
3300021356|Ga0213858_10065039Not Available1774Open in IMG/M
3300021364|Ga0213859_10051847All Organisms → Viruses → Predicted Viral1950Open in IMG/M
3300021364|Ga0213859_10062554All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium1770Open in IMG/M
3300021364|Ga0213859_10162950All Organisms → Viruses → Predicted Viral1045Open in IMG/M
3300021373|Ga0213865_10038622All Organisms → Viruses → Predicted Viral2667Open in IMG/M
3300021957|Ga0222717_10609690All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300021958|Ga0222718_10001988Not Available18865Open in IMG/M
3300021958|Ga0222718_10032847All Organisms → Viruses → Predicted Viral3452Open in IMG/M
3300021958|Ga0222718_10141913All Organisms → Viruses → Predicted Viral1366Open in IMG/M
3300021958|Ga0222718_10232079Not Available989Open in IMG/M
3300021960|Ga0222715_10007660Not Available8948Open in IMG/M
3300021960|Ga0222715_10034447All Organisms → Viruses → Predicted Viral3614Open in IMG/M
3300021964|Ga0222719_10049994All Organisms → Viruses → Predicted Viral3189Open in IMG/M
3300021964|Ga0222719_10071840All Organisms → Viruses → Predicted Viral2586Open in IMG/M
3300021964|Ga0222719_10169085All Organisms → Viruses → Predicted Viral1524Open in IMG/M
3300021964|Ga0222719_10185684All Organisms → Viruses → Predicted Viral1435Open in IMG/M
3300022198|Ga0196905_1003323Not Available5915Open in IMG/M
3300022198|Ga0196905_1003737Not Available5528Open in IMG/M
3300022200|Ga0196901_1001933Not Available10179Open in IMG/M
3300022934|Ga0255781_10058851Not Available2237Open in IMG/M
3300022935|Ga0255780_10001713Not Available20213Open in IMG/M
3300022935|Ga0255780_10046520Not Available2868Open in IMG/M
3300022935|Ga0255780_10257399Not Available857Open in IMG/M
3300023081|Ga0255764_10042427Not Available2854Open in IMG/M
3300023084|Ga0255778_10133075All Organisms → Viruses → Predicted Viral1338Open in IMG/M
3300023084|Ga0255778_10213412Not Available950Open in IMG/M
3300023108|Ga0255784_10529511Not Available531Open in IMG/M
3300023115|Ga0255760_10171707All Organisms → Viruses → Predicted Viral1193Open in IMG/M
3300023116|Ga0255751_10002069Not Available18943Open in IMG/M
3300023117|Ga0255757_10444885All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300023172|Ga0255766_10036994Not Available3321Open in IMG/M
3300023175|Ga0255777_10490888All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage637Open in IMG/M
3300023176|Ga0255772_10007331Not Available9877Open in IMG/M
3300023180|Ga0255768_10028211All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae4499Open in IMG/M
3300023180|Ga0255768_10524873Not Available593Open in IMG/M
3300024223|Ga0228601_1001613All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2398Open in IMG/M
(restricted) 3300024255|Ga0233438_10034711Not Available2763Open in IMG/M
3300025070|Ga0208667_1001724Not Available7693Open in IMG/M
3300025610|Ga0208149_1009271All Organisms → Viruses → Predicted Viral3051Open in IMG/M
3300025636|Ga0209136_1016214All Organisms → Viruses → Predicted Viral3106Open in IMG/M
3300025646|Ga0208161_1000836Not Available17070Open in IMG/M
3300025646|Ga0208161_1022531All Organisms → Viruses → Predicted Viral2341Open in IMG/M
3300025647|Ga0208160_1106929Not Available719Open in IMG/M
3300025674|Ga0208162_1164262All Organisms → cellular organisms → Bacteria596Open in IMG/M
3300025695|Ga0209653_1032148All Organisms → Viruses → Predicted Viral2222Open in IMG/M
3300025695|Ga0209653_1063319All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1334Open in IMG/M
3300025705|Ga0209374_1057188All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1355Open in IMG/M
3300025767|Ga0209137_1086549All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium1303Open in IMG/M
3300025879|Ga0209555_10016716Not Available3692Open in IMG/M
3300026138|Ga0209951_1005820All Organisms → Viruses → Predicted Viral2691Open in IMG/M
3300026183|Ga0209932_1010966All Organisms → Viruses → Predicted Viral2473Open in IMG/M
3300026453|Ga0228644_1016593Not Available1558Open in IMG/M
3300026506|Ga0228604_1069254All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300027917|Ga0209536_100035455Not Available6721Open in IMG/M
3300028130|Ga0228619_1132707Not Available563Open in IMG/M
3300028132|Ga0228649_1070264All Organisms → cellular organisms → Bacteria907Open in IMG/M
3300028391|Ga0233394_1010282All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2776Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh38.19%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous12.50%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater7.64%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water7.64%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water6.25%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine4.86%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine3.47%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient3.47%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment2.78%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater2.08%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine2.08%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater2.08%
WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water1.39%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment0.69%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.69%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine0.69%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater0.69%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine0.69%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water And Sediment0.69%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment0.69%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment0.69%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001419Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline water (15 m)EnvironmentalOpen in IMG/M
3300003216Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_59LU_5_DNAEnvironmentalOpen in IMG/M
3300003580Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - Saanich Inlet SI074_LV_120m_DNAEnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300005512Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_waterEnvironmentalOpen in IMG/M
3300005611Saline surface water microbial communities from Etoliko Lagoon, GreeceEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006357Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006637Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNAEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006870Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300007236Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNAEnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007554Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709EnvironmentalOpen in IMG/M
3300007623Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_A_H2O_MGEnvironmentalOpen in IMG/M
3300007725Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MGEnvironmentalOpen in IMG/M
3300009000Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MGEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009027Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MGEnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300010299Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010300Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNAEnvironmentalOpen in IMG/M
3300012936Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaGEnvironmentalOpen in IMG/M
3300012954Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaGEnvironmentalOpen in IMG/M
3300013195Marine hypoxic microbial communities from the Gulf of Mexico, USA - 10m_Station7_GOM_MetagenomeEnvironmentalOpen in IMG/M
3300016747Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071409BT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016762Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071413CT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017706Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaGEnvironmentalOpen in IMG/M
3300017732Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 38 SPOT_SRF_2012-12-11EnvironmentalOpen in IMG/M
3300017744Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23EnvironmentalOpen in IMG/M
3300017753Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26EnvironmentalOpen in IMG/M
3300017818Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017824Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017949Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017950Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017952Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017956Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017957Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017958Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017962Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017964Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017967Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017968Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017986Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017992Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_S_1 metaGEnvironmentalOpen in IMG/M
3300018049Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018416Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018423Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018424Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018428Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019274Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071405CT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020379Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556001-ERR599168)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300021356Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245EnvironmentalOpen in IMG/M
3300021364Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304EnvironmentalOpen in IMG/M
3300021373Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022198Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022934Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaGEnvironmentalOpen in IMG/M
3300022935Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaGEnvironmentalOpen in IMG/M
3300023081Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaGEnvironmentalOpen in IMG/M
3300023084Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaGEnvironmentalOpen in IMG/M
3300023108Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaGEnvironmentalOpen in IMG/M
3300023115Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaGEnvironmentalOpen in IMG/M
3300023116Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaGEnvironmentalOpen in IMG/M
3300023117Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaGEnvironmentalOpen in IMG/M
3300023172Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaGEnvironmentalOpen in IMG/M
3300023175Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaGEnvironmentalOpen in IMG/M
3300023176Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaGEnvironmentalOpen in IMG/M
3300023180Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaGEnvironmentalOpen in IMG/M
3300024223Seawater microbial communities from Monterey Bay, California, United States - 1DEnvironmentalOpen in IMG/M
3300024255 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MGEnvironmentalOpen in IMG/M
3300025070Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025610Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025636Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_90LU_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025646Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025647Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025695Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025705Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m (SPAdes)EnvironmentalOpen in IMG/M
3300025767Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_105LU_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025879Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_85LU_5_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300026138Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026183Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026453Seawater microbial communities from Monterey Bay, California, United States - 56DEnvironmentalOpen in IMG/M
3300026506Seawater microbial communities from Monterey Bay, California, United States - 4DEnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300028130Seawater microbial communities from Monterey Bay, California, United States - 22DEnvironmentalOpen in IMG/M
3300028132Seawater microbial communities from Monterey Bay, California, United States - 61DEnvironmentalOpen in IMG/M
3300028391Seawater microbial communities from Monterey Bay, California, United States - 24DEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI11705J14877_1001580233300001419Saline Water And SedimentLAAIKKCKPKKEKMAKIYESPDGGETVFERDTVTGERICIEKPIQPDWHIEWHDFELIQSMAEEGNKTLQNLLKEVKLVYNLSIDAKEIYDD*
JGI26079J46598_100745623300003216MarineMVKIFESPDGGKTVFERDTETGDRVCIEKEQHPDWHIEWHDFELIQSMAEEGNKTLQNLLKEVKLVYNLSIEEHD*
JGI26260J51721_104768713300003580MarineMVKIYESPDGGKTVYERDTDSGERICIEEPKYPDWYIHWHDFELIQSMAEEGNKTLQNLLKEVKLVYNISIEED*
Ga0055584_10002324753300004097Pelagic MarineMVKIYESPDGGKTVYERDTDSGERICIEEPKYPDWYIQWHDFELIQSMAEEGNKTLQNLLKEVKLVYNISIEED*
Ga0074648_100740133300005512Saline Water And SedimentMAKIYESPDGGETVFERDTVTGERICIEKPIQPDWHIEWHDFELIQSMAEEGNKTLQNLLKEVKLVYNLSIDAKEIYDD*
Ga0074648_101829793300005512Saline Water And SedimentMAKIYESPDSGETVFERDTVTGERICIENPTKPDWHIEWHDFDLIQIMAEEGNKTLQNLLKEVKLVYNLSIEEEEY*
Ga0074648_105652043300005512Saline Water And SedimentMVKIYESPDGGETVFERDTVTGERICIEKPIKPDWHIDPYDFDLIMEMANDGNKTLRNLLKEVKLVFDLSYTEE*
Ga0074648_106288333300005512Saline Water And SedimentMAKIYESPDGGETVYERDTVTGDRVCIEKPKRPDWYLDDYELQEIKELAEEGNKTLQNLLKEVKLVYNLSKEED*
Ga0074647_100663623300005611Saline Water And SedimentMAKIYESPDSGETVFERDTVTGERICIENPTKPDWHIEWHDFDLIQIMAEEGNKTLQNLLKEVKLVYNLSIDAKEIYDD*
Ga0075474_10001432133300006025AqueousMVKIYESPDGGETVYERDTVTGERICIEKPKHPDWYLDDYELQEIKELAEEGNKTLQNLLKEVKLVYNLSREEDA*
Ga0075502_162366223300006357AqueousMVKIYESPDGGETVYERDTVTGERICIEKPKHPDWYLDDFELQEIKELAEEGNKTLQNLLKEVKLVYNLSREEDA*
Ga0075461_1010614133300006637AqueousRVGLQFYQNSSAAIKKCKPKKGKMVKIYESPDGGETVYERDTVTGERICIEKPKHPDWYLDDYELQEIKELAEEGNKTLQNLLKEVKLVYNLSREEDA*
Ga0098048_1000063503300006752MarineMVKIYESPDGGKTVYERDTDSGERICIEKPVFPEWHITEYEFHEIQELAEDGNKTLQNLLKEVKLVYNISIEEN*
Ga0098055_1000144183300006793MarineMVKIYESPDGGKTVYERDTDSGERICIEKPVFPEWHITEYEFHEIQELAEDGNKTLQNLLKEVKLVYNISIEED*
Ga0075479_1027285323300006870AqueousMVKIYESPDGGLTVYERDTVTGKRVCIEKPTFPDWYIDDHDWYEICELANQGNKTLQKMLKEIKLIHDLSKDPEETYDD*
Ga0075463_1024387523300007236AqueousMVKIYESPDGGETVYERDTVTGERICIEKPKHPDWYLDDYELQEIKELAEEGNKTLQNLLKEVKLVYNLSREED
Ga0099851_100410393300007538AqueousMVKIYESPDGGETVYERDLETGERICVEKPKRPEWFLDDYEWYEIKELAEEGNKTLQNLLKEVKLVYNLSKESEEIYDD*
Ga0099851_103223153300007538AqueousMVKIYESPDGGLTVYERDTVTGKRICIEKPTFPEWHIDDNDWWEIKDLAEEGNKTLQNLLKEVKLVYNLSKEPEETYDE*
Ga0099849_103777933300007539AqueousMVKIYESPDGGKTVYERDTVTGDRVCIEKEQHPDWHIDPYDFDLIMEMANDGNKTLQNLLKEVKLVYNLSKESEEIYDD*
Ga0099849_107247033300007539AqueousMAKIYESPDGGETVFEKDTVTGERICIEKPIKPDWHIEWHDFELIQSMAEEGNKTLQNLLKEVKLVYNLSTESEEIYDD*
Ga0099846_101237423300007542AqueousMVKIYESPDGGLTVYQRDTVTGKRICIEKPTFPEWHIDDNDWWEIKDLAEEGNKTLQNLLKEVKLVYNLSKEPEETYDE*
Ga0102820_106236713300007554EstuarineMVKIYESPDGGKTVYERDTDSGERICIEKPVFPEWHITEYEFHVIQCLAEQGNKTLQNLLKEVKLVYNISIEEN*
Ga0102948_102400623300007623WaterMTKIYESPDGGETVYERDTETGERVCIEKPEHPDWHIEWHDLDLIQIMAAEGTKTLQNLLIEVKLVYNLSLEEEE*
Ga0102951_103050633300007725WaterMTKIYESPDGGETVYERDTETGERVCIEKPVHPDWYIDPYDFDLVIEMAKDGNKTLQNLLKEVKLVFELSYKDD*
Ga0102960_1000147213300009000Pond WaterMVKIYESPDGGKTVFERDTETGDRVCIEKEQHPDWHIDPYDFDLIMEMANDGNKTLQNLLKEVKLIFNLSYTEE*
Ga0102960_100235073300009000Pond WaterMVKIYESPDGGETVYERDTETGERICIEKPVHPDWYIDPYDFDLINEMAKDGNKTLQNLLKEVKLVFELSYKDD*
Ga0102960_101510183300009000Pond WaterMVKIYESPDGGETVYERDTVTGERICIEKPKHPDWYLDDYELHEIKELAEEGNKTLQNLLKEVKLVYNLSRETDD*
Ga0102960_105570923300009000Pond WaterMVKIYESPDGGKTVYERDTETGERVCIEKPEHPDWHIEWHDFDLIQIMAEEGNKTLQNLLKEVKLVYNLSLEEEE*
Ga0102960_113494423300009000Pond WaterMTKIYESPDGGETVYERDTKTGERTCIEKPVHPDWYIDPYDFDLITEMAKDGNKTLQNLLKEVKLVFDLSYTEE*
Ga0102963_124297113300009001Pond WaterKIYESPDGGETVYERDTKTGERTCIEKPVHPDWYIDPYDFDLITEMAKDGNKTLQNLLKEVKLVFDLSYTEE*
Ga0102957_104225123300009027Pond WaterMVKIYESPDGGKTVFERDTETGDRVCIEKEQHPDWHIDPYDFDLIMEMANDGNKTLQNLLKEVKLVFDLSYTEE*
Ga0129348_111638023300010296Freshwater To Marine Saline GradientMVKIYESPDGGETVYERDTVTGERICIEKPIKPDWHIEWHDFELIQSMAEEGNKTLQNLLKEVKLVYNLSIEED*
Ga0129345_108224913300010297Freshwater To Marine Saline GradientMVKIYESPDGGKTVYERDTDSGERICIEEPKYPDWYIQWHDFELIQSMAEEGNKTLQNLLKEVKLVYNLSKEED*
Ga0129342_105796223300010299Freshwater To Marine Saline GradientMAKIYESPDGGETVFEKDTVTGERICIEKPIKPDWHIEWHDFELIQSMAEEGNKTLQNLLKEVKLVYNLSIEED*
Ga0129342_120575123300010299Freshwater To Marine Saline GradientMVKIYESPDGGETVYERDTETGERICVEKPKRPEWFLDDYEWYEIKELAEEGNKTLQNLLKEVKLVYNLSKESEEIYDD*
Ga0129351_108107523300010300Freshwater To Marine Saline GradientMVKIYESPDGGETVYERDTVTGDRVCIEKPKRPDWYLDDYELQEIKELAEEGNKTLQNLLKEVKLVYNLSKEED*
Ga0163109_1112089433300012936Surface SeawaterESPDGGKTVFERDTDSGERICIEKPVFPEWHITEYEFHEIIELAEDGNKTLQNLLKEVKLVYNLSKEEE*
Ga0163109_1132867333300012936Surface SeawaterPDGGKTVYERDTKTGERVCIEKPIYPEWYIEDHEWYDIKDLAEEGNKTLQNVLKEVKLIYNLSKEEQ*
Ga0163111_10001286163300012954Surface SeawaterMVKIYESPDGGKTVFERDTDSGERICIEKPVFPEWHITEYEFHEIIELAEDGNKTLQNLLKEVKLVYNLSKEEE*
Ga0116815_101091323300013195MarineMVKIFESPDGGKTVYERDTKTGERVCIEKPIYPEWYIEDHEWYDIKDLAEEGNKTLQNLLKEVKLIYNLSKEDA*
Ga0182078_1026487213300016747Salt MarshMAKIYESPDGGETVYERDTVTGERICIEKPVHPDWYIDPYDFDLITEMAKDGNKTLQNLLKEVKLVYNLSIE
Ga0182084_157757443300016762Salt MarshMAKIYESPDGGETVYERDTVTGERICIEKPVHPDWYIDPYDFDLITEMAKDGNKTLQNLLKEV
Ga0181377_101568633300017706MarineMVKIYESPDGGKTVYERDTDSGERICIEKPVFPEWHITEYEFHEIQELAEDGNKTLQNLLKEVKLVYNISIEED
Ga0181415_102910423300017732SeawaterMVKIYESPDGGKTVYERDTDSGERICIEKPVFPEWHITEYEFHVIQCLAEQGNKTLQNLLKEVKLVYNISIEKN
Ga0181397_117875323300017744SeawaterMVKIYESPDGGKTVYERDTDSGERICIEKPVFPEWHITEYEFHVIQCLAEQGNKTLQNLLKEVKLVYNIS
Ga0181407_109226013300017753SeawaterKIYESPVGGKTVYERDTDSGERICIEKPVFPEWHITEYEFHVIQCLAEQGNKTLQNLLKEVKLVYNISIEEN
Ga0181565_1018919733300017818Salt MarshMAKIYESPDGGETVYERDTVTGERICIEKPVHPDWYIDPYDFDLITEMAKDGNKTLQNLLKEVKLVYNLSIEEEDYHG
Ga0181552_10002745153300017824Salt MarshMVKIYESPDGGKTVFERDTDSGERICIEKPVFPEWHITEYEFHEIQELAEDGNKTLQNLLKEVKLVYNLSKEEE
Ga0181584_1000387713300017949Salt MarshMVKIYESPDGGQTVYERDTVTGERICIEKPTFPDWYIDDHDWYEICELANQGNKTLQKMLKEIKLIHDLSKD
Ga0181584_1003522643300017949Salt MarshMVKIYESPDGGLTVYERDTVTGKRVCIEKPTFPDWYIDDHDWYEICELANQGNKTLQKMLKEIKLIHDLSKDPEETYDD
Ga0181584_1007590523300017949Salt MarshMVKIYESPDGGKTVYERDTVTGDRVCIEKEQHPDWHIDPYDFDLIMEMANDGNKTLQNLLKEVKLIFNLSYTEE
Ga0181584_1009815643300017949Salt MarshMTKIYESPDGGETVYERDTETGERICIEKPVHPDWYIDPYDFDLITEMAKDGNKTLQNLLKEVKLVFELSYKDD
Ga0181584_1041912823300017949Salt MarshMAKIYESPDGGKTVYERDTITGERICIEKPVHPDWHIEWHDFELIKEMANDGNKTLQNLLKEVKLVYNLSIEEEEYHD
Ga0181584_1048802723300017949Salt MarshMVKIYESPDGGETVFERDTETGDRICCKKPVFPDWYVDDFTWYKICEEANRGNKTLQNLLRELILVYNLSKEE
Ga0181607_1051717813300017950Salt MarshMVKIYESPDGGLTVYERDTVTGKRVCIEKPTFPDWYIDDHDWYEICELANQGNKTLQKMLKEIKLIHDL
Ga0181577_1035171123300017951Salt MarshMVKIYESPDGGKTVFERDTETGNRVCIEKPIKPDWHIDPYDFDLIMEMANDGNKTLQNLLKEVKLVFDLSYTEED
Ga0181583_1000475613300017952Salt MarshMVKIYESPDGGETVYERDTVTGERICIEKPTFPDWYIDDHDWYEICELANQGNKTLQKMLKEIKLIHDLSKDPEETYDD
Ga0181583_1011438513300017952Salt MarshSSSEDIKKCKPKKGTMAKIYESPDGGETVYERDTETGERVCIEKPVHPDWYIDPYDFDLITEMAKDGNKTLQNLLKEVKLVFELSYKDD
Ga0181583_1023045223300017952Salt MarshMAKIYESPDGGETVYERDTVTGERICIEKPVHPDWYIDPYDFDLITEMAKDGNKTLQNLLKEVKLVYNLSIEEDYHG
Ga0181583_1029219033300017952Salt MarshVLTECGKINLKMAKIYESPDGGKTVYERDTITGERICIEKPVHPDWHIEWHDFELIKEMANDGNKTLQNLLKEVKLVYNLSIEEEEYHD
Ga0181583_1034272623300017952Salt MarshMVKIYESPDGGKTVYERDTETDERVCIEKPIRPDWHIEWHDFELIQSMAEEGNKTLQNLLKEVKLVYNLSIEEEDYHG
Ga0181580_1003830863300017956Salt MarshMVKIYESPDGGKTVYERDTVTGDRICIEKEQHPDWHIDPYDFDLIMEMANDGNKTLQNLLKEVKLIFNLSYTEE
Ga0181571_1029517423300017957Salt MarshMAKIYESPDGGETVYERDTETGERVCIEKPVHPDWYIDPYDFDLITEMAKDGNKTLQNLLKEVKLVFELSYKDD
Ga0181571_1064076623300017957Salt MarshVFERDTVTGERVCIEKPKRPDWHIEWHDFELIQTMAEEGNKTLRNLLKEVKLVYNLSLEEEEH
Ga0181571_1077404613300017957Salt MarshMVKIYESPDGGKTVFERDTDSGERICIEKPVFPEWHITEYEFHEIQELAEDGNKTLQNLLKEVKLVYNLS
Ga0181582_1000114113300017958Salt MarshMVKIYESPDGGLTVYERDTVTGKRVCIEKPTFPDWYIDDHDWYEICELANQGNKTLQKMLKEIKLIH
Ga0181582_1003922523300017958Salt MarshVLIECGRTSLKMVKIYESPDGGKTVFERDTETGDRVCIEKEQHPDWHIEWHDFDLIQIMAEEGNKTLQNLLKEVKLVYNLSLEEEEYD
Ga0181582_1020058143300017958Salt MarshMAKIYESPDGGETVFERDTVTGERICIENPTKPDWHIEWHDFDLIQIMAEEGNKTLQNLLKEVKLVYNLSLEEEEH
Ga0181582_1078264923300017958Salt MarshMVKIYESPDGGQTVYERDTVTGERICIEKPTFPDWYIDDHDWYEICELANQGNKTLQKMLKEIKLIHDLSKDPEETYDD
Ga0181581_1000637213300017962Salt MarshMVKIYESPDGGQTVYERDTVTGERICIEKPTFPDWYIDDHDWYEICELANQGNKTLQKMLKEIKLIH
Ga0181581_1050116213300017962Salt MarshMVKIYESPDGGKTVYERDTETDERVCIEKPIRPDWHIEWHDFELIQSMAEEGNKTLQNLLKEVKLVYNLSIEED
Ga0181589_1002550713300017964Salt MarshTVYERDTITGERICIEKPVHPDWHIEWHDFELIKEMANDGNKTLQNLLKEVKLVYNLSIEEEEYHD
Ga0181590_1004919053300017967Salt MarshMVKIYESPDGGKTVYERDTVTGDRVCIEKEQHPDWHIDPYDFDLIMEMANDGNKTLQNLLKEVKLVFDLSYTEE
Ga0181587_1003447073300017968Salt MarshMVKIYESPDGGETVYERDTVTGERICIEKPTFPDWYIDDHDWYEICELANQGNKTLQKMLKEI
Ga0181569_1073100213300017986Salt MarshKIYESPDGGKTVFERDTDSGERICIEKPVFPQWHITEYEFHEIQELAEDGNKTLQNLLKEVKLVYNLSKEEE
Ga0180435_1165260723300017992Hypersaline Lake SedimentMVKIYESPDGGETVFERDTVTGERVCIEKPTKPDWHIDPYDFDLIMEMANDGNKTLRNLLKEVKLVFELSYTEK
Ga0181572_1035621323300018049Salt MarshMVKIYESPDGGETVYERDTDTGERICIEKPVHPDWYIDPYDFDLITEMAKDGNKTLQNLLKEVKLVFELSYKDD
Ga0181572_1088651423300018049Salt MarshMVKIYESPDGGATVYERDTVTGERVCIEKPKYPDYYILDHEWNEITELAENGNKALQKLLKEVKLVY
Ga0181553_1001102683300018416Salt MarshMVKIYESPDGGKTVFERDTDSGERICIEKPVFPQWHITEYEFHEIQELAEDGNKTLQNLLKEVKLVYNLSKEEE
Ga0181592_1031114833300018421Salt MarshMVKIYESPDGGETVFERDTETGDRICCKKPVFPDWYVDDFTWYKICEEANRGNKTLQNLLKELILIYNLSKEEE
Ga0181593_1096061323300018423Salt MarshMVKIYESPDGGKTVYERDTVTGDRVCIEKEQHPDWHIDPYDFDLIMEMANDGNKTLQNLLKEVKLIFNLSYTDE
Ga0181591_1101832523300018424Salt MarshCKKNSRYQNQIMAKIYESPDGGKTVYERDTVTGDRVCIEKPIKPDWHIEWHDFELIQSMAEEGNKTLQNLLKEVKLVYNLSIEED
Ga0181568_1055132623300018428Salt MarshVLIECGKINLKMVKIYESPDGGKTVFERDTETGNRVCIEKPIKPDWHIDPYDFDLIMEMANDGNKTLQNLLKEVKLVFDLSYTEED
Ga0182073_111571713300019274Salt MarshKTVYERDTITGERICIEKPVHPDWHIEWHDFELIKEMANDGNKTLQNLLKEVKLVYNLSIEEEDYHG
Ga0206125_1014310723300020165SeawaterMVKIYESPDGGKTVYERDTDSGERICIEEPKYPDWYIQWHDFELIQSMAEEGNKTLQNLLKEVKLVYNISIEED
Ga0211652_1012498723300020379MarineMVKIYESPDGGKTVFERDTDSGERICIEKPVFPEWHITEYEFHEIIELAEDGNKTLQNLLKEVKLVYNLSKEEE
Ga0211576_1000603223300020438MarineMVKIYESPDGGKTVYERDTDSGERICIEKPVFPEWHITEYEFHVIQCLAEQGNKTLQNLLKEVKLVYNISIEEN
Ga0213858_1006503913300021356SeawaterMVKIYESPDGGETVFERDTVTGERVCIEKPTKPDWHIDPYDFDLIMEMANDGNKTLRNLLKEVKLVFDLSYTEE
Ga0213859_1005184713300021364SeawaterGETVYEGDTETGERVCIEKPVHPDWYIDPYDFDLITEMAKDGNKTLQNLLKEVKLVFELSYTEE
Ga0213859_1006255443300021364SeawaterVLIECGKINLKMVKIYESPDGGETVYERDTETGERNCISKPKHPDWYIDPYDFDLIIEMAKDGNKTLQNLLKEVKLVFELSYKDD
Ga0213859_1016295023300021364SeawaterMAKIYESPDGGETVYERDTVTGDRVCIEKPKRPDWYLDDYELQEIKELAEEGNKTLQNLLKEVKLVYNLSKEED
Ga0213865_1003862283300021373SeawaterMVKIFESPDGGKTVYERDTETGERVCIEKPVHPDWYIDPYDFDLVIEMAKDGNKTLQNLLKEVKLVFELSYKDD
Ga0222717_1060969023300021957Estuarine WaterMVKIYESPDGGETVYERDTVTGERICIEKPKHPDWYLDDYELHEIKELAEEGNKTLQNLLKEVKLVYNLSRETDD
Ga0222718_10001988193300021958Estuarine WaterMTKIYESPDGGETVYERDTETGERVCIEKPVHPDWYIDPYDFDLVIEMAKDGNKTLQNLLKEVKLVFELSYKDD
Ga0222718_1003284723300021958Estuarine WaterMTKIYESPDGGETVYERDTKTGERTCIEKPVHPDWYIDPYDFDLITEMAKDGNKTLQNLLKEVKLVFDLSYTEE
Ga0222718_1014191343300021958Estuarine WaterVLIECGKTNLKMVKIYESPDGGETVYERDTETGERICIEKPVHPDWYIDPYDFDLINEMAKDGNKTLQNLLKEVKLVFELSYKDD
Ga0222718_1023207923300021958Estuarine WaterMVKIYESPDGGKTVFERDTETGDRVCIEKEQHPDWHIDPYDFDLIMEMANDGNKTLQNLLKEVKLIFNLSYTEE
Ga0222715_1000766043300021960Estuarine WaterMVKIYESPDGGETVYERDTVTGERICIEKPKHPDWYLDDYELHEIKELAEEGNKTLQNLLKEVKLVYNLSKETDD
Ga0222715_1003444783300021960Estuarine WaterMVKIYESPDGGLTVYERDTVTGKRICIEKPTFPEWHIDDNDWWEIKDLAEEGNKTLQNLLKEVKLVYNLSKEPEETYDE
Ga0222719_10049994103300021964Estuarine WaterGGETVYERDTETGERIRIEKPVHPDWYIDPYDFDLINEMAKDGNKTLQNLLKEVKLVFELSYKDD
Ga0222719_1007184013300021964Estuarine WaterALSKGIMVKIYESPDGGKTVYERDTVTGDRVCIEKEQHPDWHIDPYDFDLIMEMANDGNKTLQNLLKEVKLVFDLSYTEE
Ga0222719_1016908543300021964Estuarine WaterMVKIYESPDGGKTVYERDTETGERVCIEKPEHPDWHIEWHDFDLIQIMAEEGNKTLQNLLKEVKLVYNLSLEEEE
Ga0222719_1018568423300021964Estuarine WaterMAKIYESPDGGKTVYERDTVTGERICIEKPIKPDWHIEWHDFELIQSMAEEGNKTLQNLLKEVKLVYNLSIEED
Ga0196905_1003323123300022198AqueousESPDGGLTVYERDTVTGKRICIEKPTFPEWHIDDNDWWEIKDLAEEGNKTLQNLLKEVKLVYNLSKEPEETYDE
Ga0196905_1003737143300022198AqueousMVKIYESPDGGETVYERDTKTGERICVEKPKRPEWFLDDYEWYEIKELAEEGNKTLQNLLKEVKLVYNLSKESEEIYDD
Ga0196901_100193343300022200AqueousMVKIYESPDGGETVYERDTETGERICVEKPKRPEWFLDDYEWYEIKELAEEGNKTLQNLLKEVKLVYNLSKESEEIYDD
Ga0255781_1005885153300022934Salt MarshMAKIYESPDGGETVYERDTVTGERICIEKPVHPDWYIDPYDFDLITEMAKDGNKTLQNLLKEVKLVYNLSIEEE
Ga0255780_10001713293300022935Salt MarshMVKIYESPDGGLTVYERDTVTGKRVCIEKPTFPDWYIDDHDWYEICELANQGNKTLQKMLKEIKLIHD
Ga0255780_1004652063300022935Salt MarshMVKIYESPDGGQTVYERDTVTGERICIEKPTFPDWYIDDHDWYEICELANQGNKTLQKMLKEIKLIHD
Ga0255780_1025739913300022935Salt MarshIMVKIYESPDGGETVFERDTETGDRICCKKPVFPDWYVDDFTWYKICEEANRGNKTLQNLLRELILVYNLSKEE
Ga0255764_1004242763300023081Salt MarshMVKIYESPDGGQTVYERDTVTGERICIEKPTFPDWYIDDHDWYEICELANQGNKTLQKMLKEIKL
Ga0255778_1013307513300023084Salt MarshMVKIYESPDGGLTVYERDTVTGKRVCIEKPTFPDWYIDDHDWYEICELANQGNKTLQKMLKEIKL
Ga0255778_1021341243300023084Salt MarshKPKKGTMAKIYESPDGGETVYERDTETGERVCIEKPVHPDWYIDPYDFDLITEMAKDGNKTLQNLLKEVKLVFELSYKDD
Ga0255784_1052951123300023108Salt MarshEKALSKGIMVKIYESPDGGKTVYERDTVTGDRVCIEKEQHPDWHIDPYDFDLIMEMANDGNKTLQNLLKEVKLIFNLSYTEE
Ga0255760_1017170713300023115Salt MarshMVKIYESPDGGLTVYERDTVTGKRVCIEKPTFPDWYIDDHDWYEICELANQGNKTLQKM
Ga0255751_1000206933300023116Salt MarshMTKIYESPDGGETVYERDTETGERICIEKPVHPDWYIDPYDFDLITEMAKDGNKTLQNLLNKLN
Ga0255757_1044488523300023117Salt MarshMVKIYESPDGGQTVYERDTVTGERICIEKPTFPDWYIDDHDWYEICELANQGNKTLQKMLKEI
Ga0255766_1003699413300023172Salt MarshMVKIYESPDGGLTVYERDTVTGKRVCIEKPTFPDWYIDDHDWYEICELANQGNKTLQKML
Ga0255777_1049088823300023175Salt MarshMVKIYESPDGGKTVFERDTDSGERICIEKPVFPQWHITEYEFHEIQELAEDGNKTLQNLLKEVKLVYNLSKEEEXKLELYKTELK
Ga0255772_1000733113300023176Salt MarshMVKIYESPDGGQTVYERDTVTGERICIEKPTFPDWYIDDHDWYEICELANQGNKTLQKMLKEIKLIHN
Ga0255768_1002821173300023180Salt MarshMVKIYESPDGGETVYERDTVTGERICIEKPTFPDWYIDDHDWYEICELANQGNKTLQKMLKEIKLIHDLSKD
Ga0255768_1052487313300023180Salt MarshMEKIYESPDGGETVFERDTVTGERVCIEKPKRPDWHIEWHDFELIQTMAEEGNKTLRNLLKEVKLVYNLSIEEEEY
Ga0228601_100161373300024223SeawaterSPDGGKTVYERDTDSGERICIEKPVFPEWHITEYEFHVIQCLAEQGNKTLQNLLKEVKLVYNISIEEN
(restricted) Ga0233438_1003471123300024255SeawaterMVKIYESPDGGKTVYERDTDSGERICIEEPKYPDWYIHWHDFELIQSMAEEGNKTLQNLLKEVKLVYNISIEED
Ga0208667_1001724143300025070MarineMVKIYESPDGGKTVYERDTDSGERICIEKPVFPEWHITEYEFHEIQELAEDGNKTLQNLLKEVKLVYNISIEEN
Ga0208149_100927133300025610AqueousMVKIYESPDGGETVYERDTVTGERICIEKPKHPDWYLDDYELQEIKELAEEGNKTLQNLLKEVKLVYNLSREEDA
Ga0209136_101621453300025636MarineMVKIFESPDGGKTVFERDTETGDRVCIEKEQHPDWHIEWHDFELIQSMAEEGNKTLQNLLKEVKLVYNLSIEEHD
Ga0208161_1000836103300025646AqueousMVKIYESPDGGLTVYQRDTVTGKRICIEKPTFPEWHIDDNDWWEIKDLAEEGNKTLQNLLKEVKLVYNLSKEPEETYDE
Ga0208161_102253123300025646AqueousMVKIYESPDGGETVYERDTETGERICIEKPKRPEWFLDDYEWYEIKELAEEGNKTLQNLLKEVKLVYNLSKESEEIYDD
Ga0208160_110692923300025647AqueousMVKIYESPDGGETVYERDLETGERICVEKPKRPEWFLDDYEWYEIKELAEEGNKTLQNLLKEVKLVYNLSKESEEIYDD
Ga0208162_116426223300025674AqueousMAKIYESPDGGETVFEKDTVTGERICIEKPIKPDWHIEWHDFELIQSMAEEGNKTLQNLLKEVKLVYNLSIEED
Ga0209653_103214813300025695MarineMVKIYESPDGGETVYERDTVTGERICIDKPVYPDWHIEWHDFELIQSMAEEGNKTLQNLLKEVKLVYNLSIDNED
Ga0209653_106331933300025695MarineMVKIYESPDCGETVFERDTVTGERVCIEKPTKPDWHIDPYDFDLIMEMANDGNKTLRNLLKEVKLVFDLSYTEE
Ga0209374_105718833300025705MarineVYERDTDSGERICIEEPKYPDWYIHWHDFELIQSMAEEGNKTLQNLLKEVKLVYNISIEE
Ga0209137_108654913300025767MarineMVKIFESPDGGKTVFERDTETGDRVCIEKEQHPDWHIEWHDFELIQSMAEEGNKTLQNLLKEVKLVYNLSIEED
Ga0209555_1001671633300025879MarineMVKIYESPDRGETVYERDTVTGERICIDKPVYPDWHIEWHDFELIQSMAEEGNKTLQNLLKEVKLVYNLSIDNED
Ga0209951_100582023300026138Pond WaterMVKIYESPDGGKTVFERDTETGDRVCIEKEQHPDWHIDPYDFDLIMEMANDGNKTLQNLLKEVKLVFDLSYTEE
Ga0209932_101096613300026183Pond WaterKTNLKMVKIYESPDGGETVYERDTETGERICIEKPVHPDWYIDPYDFDLINEMAKDGNKTLQNLLKEVKLVFELSYKDD
Ga0228644_101659313300026453SeawaterMVKIYESPDGGKTVYERDTDSGERICIEKPVFPEWHITEYEFHVIQCLAEQGNKTLQNLLKEVKLVYNISI
Ga0228604_106925423300026506SeawaterMVKIYESPDGGKTVYERDTDSGERICIEKPVFPEWHITEYEFHVIQCLAEQGNKTLQNLLKEVKLVY
Ga0209536_100035455143300027917Marine SedimentMVKIYESPDGGETVYERDTVTGDRVCIEKPKRPDWYLDDYELQEIKELAEEGNKTLQNLLKEVKLVYNLSIEED
Ga0228619_113270713300028130SeawaterDGGKTVYERDTDSGERICIEKPVFPEWHITEYEFHVIQCLAEQGNKTLQNLLKEVKLVYNISIEEN
Ga0228649_107026413300028132SeawaterMVKIYESPDGGKTVYERDTDSGERICIEKPVFPEWHITEYEFHVIQCLAEQGNKTLQNLL
Ga0233394_101028283300028391SeawaterKTVYERDTDSGERICIEKPVFPEWHITEYEFHVIQCLAEQGNKTLQNLLKEVKLVYNISIEEN


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.